Clone Name | bastl31h02 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 Length = 2005935 Score = 40.1 bits (20), Expect = 0.52 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 cctgcccgcccaccgagaaaggaa 32 |||||||| ||||||||||||||| Sbjct: 1245096 cctgcccgtccaccgagaaaggaa 1245119
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 34 gcggtcaatctggtggcct 52 ||||||||||||||||||| Sbjct: 2495097 gcggtcaatctggtggcct 2495079
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 38.2 bits (19), Expect = 2.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 33 cgcggtcaatctggtggcctcgt 55 ||||||||| ||||||||||||| Sbjct: 45592 cgcggtcaacctggtggcctcgt 45614
>gb|S55763.1| cephamycin gene cluster: cefD=isopenicillin N epimerase, cefE=deacetoxycephalosporin C synthase [Nocardia lactamdurans, Genomic, 2169 nt] Length = 2169 Score = 38.2 bits (19), Expect = 2.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 33 cgcggtcaatctggtggcctcgt 55 ||||||||| ||||||||||||| Sbjct: 289 cgcggtcaacctggtggcctcgt 311
>dbj|BS000242.1| Pan troglodytes chromosome 22 clone:PTB-120M01, map 22, complete sequences Length = 224098 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 7 gccctgcccgcccaccgag 25 ||||||||||||||||||| Sbjct: 11614 gccctgcccgcccaccgag 11632
>dbj|BS000241.1| Pan troglodytes chromosome 22 clone:PTB-110J21, map 22, complete sequences Length = 102671 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 7 gccctgcccgcccaccgag 25 ||||||||||||||||||| Sbjct: 48356 gccctgcccgcccaccgag 48374
>emb|Z13984.1|NLCEFD N.lactamdurans cefD gene Length = 1197 Score = 38.2 bits (19), Expect = 2.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 33 cgcggtcaatctggtggcctcgt 55 ||||||||| ||||||||||||| Sbjct: 258 cgcggtcaacctggtggcctcgt 280
>dbj|AP000051.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 22/28, complete sequence Length = 100000 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 36 ggtcaatctggtggcctc 53 |||||||||||||||||| Sbjct: 67682 ggtcaatctggtggcctc 67665
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 41 atctggtggcctcgtgct 58 |||||||||||||||||| Sbjct: 122631 atctggtggcctcgtgct 122648
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 8 ccctgcccgcccaccgag 25 |||||||||||||||||| Sbjct: 1623546 ccctgcccgcccaccgag 1623563
>dbj|BS000188.1| Pan troglodytes chromosome 22 clone:RP43-084B17, map 22, complete sequences Length = 170687 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 36 ggtcaatctggtggcctc 53 |||||||||||||||||| Sbjct: 49890 ggtcaatctggtggcctc 49873
>dbj|AP000317.2| Homo sapiens genomic DNA, chromosome 21 clone:RP1-24517, complete sequence Length = 97831 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 36 ggtcaatctggtggcctc 53 |||||||||||||||||| Sbjct: 67682 ggtcaatctggtggcctc 67665
>dbj|AP001719.1| Homo sapiens genomic DNA, chromosome 21q, section 63/105 Length = 340000 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 36 ggtcaatctggtggcctc 53 |||||||||||||||||| Sbjct: 188891 ggtcaatctggtggcctc 188874
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 gccctgcccgcccaccga 24 |||||||||||||||||| Sbjct: 239071 gccctgcccgcccaccga 239054
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 7 gccctgcccgcccaccga 24 |||||||||||||||||| Sbjct: 2448048 gccctgcccgcccaccga 2448065
>dbj|AP000166.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone B2344F14-f50E8, segment 2/9, complete sequence Length = 100000 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 36 ggtcaatctggtggcctc 53 |||||||||||||||||| Sbjct: 59650 ggtcaatctggtggcctc 59633 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 271,601 Number of Sequences: 3902068 Number of extensions: 271601 Number of successful extensions: 18954 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 18804 Number of HSP's gapped (non-prelim): 150 length of query: 58 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 37 effective length of database: 17,151,101,840 effective search space: 634590768080 effective search space used: 634590768080 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)