>IF41_WHEAT (Q03387) Eukaryotic initiation factor iso-4F subunit p82-34|
           (eIF-(iso)4F p82-34)
          Length = 788

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +1

Query: 160 MTTDQPVISLRPG 198
           MTTDQPVISLRPG
Sbjct: 1   MTTDQPVISLRPG 13

>PDE2A_HUMAN (O00408) cGMP-dependent 3',5'-cyclic phosphodiesterase (EC|
           3.1.4.17) (Cyclic GMP-stimulated phosphodiesterase)
           (CGS-PDE) (cGSPDE)
          Length = 941

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +3

Query: 15  RSQTEPNPPPREEGKKKLGFLRDFLPGAPPIPCRSSCRGALVGFGTL 155
           RSQ  P   P E   +++ FL+   P  PP PC  S + AL+  G++
Sbjct: 12  RSQQYPAARPAEPRGQQV-FLKPDEPPPPPQPCADSLQDALLSLGSV 57

>HCN4_MOUSE (O70507) Potassium/sodium hyperpolarization-activated cyclic|
            nucleotide-gated channel 4 (Brain cyclic nucleotide gated
            channel 3) (BCNG-3)
          Length = 1186

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 19/45 (42%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
 Frame = +3

Query: 6    PGERSQTEPNPPPREEGKKK-LGFLRDFLPGAPPIPCRSSCRGAL 137
            PG RS     PPP   G +  LG L  FLP  P     SS  G L
Sbjct: 917  PGARSPQAAQPPPPLPGARGGLGLLEHFLPPPPSSRSPSSSPGQL 961

>HCN4_RAT (Q9JKA7) Potassium/sodium hyperpolarization-activated cyclic|
            nucleotide-gated channel 4
          Length = 1198

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 19/45 (42%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
 Frame = +3

Query: 6    PGERSQTEPNPPPREEGKKK-LGFLRDFLPGAPPIPCRSSCRGAL 137
            PG RS     PPP   G +  LG L  FLP  P     SS  G L
Sbjct: 930  PGARSPQAAQPPPPLPGARGGLGLLEHFLPPPPSSRSPSSSPGQL 974

>ROBO4_RAT (Q80W87) Roundabout homolog 4 precursor|
          Length = 961

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +3

Query: 42  PRE--EGKKKLGFLRDFLPGAPPIPCRSSCRGALVGFGTLSHDDRPASDQPAPRR 200
           PR+  +G++ L       PG P +P  S+  G+L+   T S   RP+   PA RR
Sbjct: 563 PRDPLDGRRSLISWDPRSPGVPLLPDTSTFYGSLIAEQTSSPPVRPSPQTPAARR 617

>SSXT_MOUSE (Q62280) SSXT protein (SYT protein) (Synovial sarcoma-associated|
           Ss18-alpha)
          Length = 418

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 15/36 (41%), Positives = 17/36 (47%)
 Frame = +3

Query: 3   GPGERSQTEPNPPPREEGKKKLGFLRDFLPGAPPIP 110
           GPG  SQ+ P PPPR       G     + G PP P
Sbjct: 86  GPGGMSQSGPPPPPRSHNMPSDG----MVGGGPPAP 117

>ROBO4_HUMAN (Q8WZ75) Roundabout homolog 4 precursor (Magic roundabout)|
          Length = 1007

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
 Frame = -1

Query: 197 PGRRLITGWSVVMAEGPEPDQGT---AAARSTGNR 102
           PGR  ++G S++MA   + D+GT    A  S G+R
Sbjct: 182 PGRHTVSGGSLLMARAEKSDEGTYMCVATNSAGHR 216

>STK6_XENLA (Q91820) Serine/threonine-protein kinase Eg2 (EC 2.7.11.1) (pEg2)|
           (p46Eg265)
          Length = 407

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +3

Query: 9   GERSQTEPNPPPREEGKKKLGFLRDFLPGAP 101
           G   Q + +  P+EEGKKK   L DF  G P
Sbjct: 115 GSTDQGKTSAVPKEEGKKKQWCLEDFEIGRP 145

>SSXT_HUMAN (Q15532) SSXT protein (Synovial sarcoma, translocated to X|
           chromosome) (SYT protein)
          Length = 418

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +3

Query: 3   GPGERSQTEPNPPPREEGKKKLGFLRDFLPGAPPIP 110
           GPG  +Q+ P PPPR       G     + G PP P
Sbjct: 86  GPGGMNQSGPPPPPRSHNMPSDG----MVGGGPPAP 117

>FOXH1_BRARE (Q9I9E1) Forkhead box protein H1 (Forkhead activin signal|
           transducer 1) (Fast-1) (Schmalspur protein)
          Length = 472

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = -3

Query: 195 GAQADHWLVCRHG*GSRTRPRHRGSS 118
           GAQ DH L CR G  S  R  HR S+
Sbjct: 21  GAQRDHHLDCRIGYSSSKRSCHRSSN 46

>ROBO4_MOUSE (Q8C310) Roundabout homolog 4 precursor|
          Length = 1012

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +3

Query: 42  PRE--EGKKKLGFLRDFLPGAPPIPCRSSCRGALVGFGTLSHDDRPASDQPAPRR 200
           PR+  EG++ L       PG P +P  S+  G+L+     S   RP+   PA RR
Sbjct: 553 PRDPLEGRRSLISWDPRSPGVPLLPDTSTFYGSLIAEQPSSPPVRPSPKTPAARR 607

>TESK1_MOUSE (O70146) Dual specificity testis-specific protein kinase 1 (EC|
           2.7.12.1) (Testicular protein kinase 1)
          Length = 627

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 18/51 (35%), Positives = 22/51 (43%)
 Frame = +3

Query: 21  QTEPNPPPREEGKKKLGFLRDFLPGAPPIPCRSSCRGALVGFGTLSHDDRP 173
           QTEP+PPP    + + G           +PC   C G    FG LS   RP
Sbjct: 550 QTEPSPPPSAPREPEEG-----------LPCPGCCLGPF-SFGFLSMCPRP 588

>BCOR_MOUSE (Q8CGN4) BCoR protein (BCL-6 corepressor)|
          Length = 1759

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 24/63 (38%), Positives = 27/63 (42%), Gaps = 8/63 (12%)
 Frame = +3

Query: 30  PNPPPREEGK-KKLGFLRDFLPGAPPIPCRSSC-----RGALVG--FGTLSHDDRPASDQ 185
           P P P EE   K L      L  A P    SSC       A+V    G++S   RPAS  
Sbjct: 512 PGPSPNEENNGKSLSLKNKALDWAIPQQRSSSCPRMGGTDAVVTNVSGSVSSSGRPASAS 571

Query: 186 PAP 194
           PAP
Sbjct: 572 PAP 574

>GMIP_MOUSE (Q6PGG2) GEM-interacting protein (GMIP)|
          Length = 971

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 42  PREEGKKKLGFLRDFLPGAPPIPCRSSC 125
           P E G++   F+R   PGAPP P  + C
Sbjct: 342 PFEPGQRYQEFVRTLQPGAPPPPSPAFC 369

>PIN3A_ORYSA (Q5VP70) Probable auxin efflux carrier component 3a (OsPIN3a)|
          Length = 618

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = -2

Query: 178 LAGLSSWLRVPNPTKAPR 125
           LAGL++W R+P+ T APR
Sbjct: 83  LAGLAAWSRLPSRTGAPR 100

>PAK1_MOUSE (O88643) Serine/threonine-protein kinase PAK 1 (EC 2.7.11.1)|
           (p21-activated kinase 1) (PAK-1) (P65-PAK) (Alpha-PAK)
           (CDC42/RAC effector kinase PAK-A)
          Length = 545

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +3

Query: 24  TEPNPPPREEGKKKLGFLRDFLPG 95
           ++P PP  EE KKK  F R  LPG
Sbjct: 38  SKPLPPNPEEKKKKDRFYRSILPG 61

>PAK1_HUMAN (Q13153) Serine/threonine-protein kinase PAK 1 (EC 2.7.11.1)|
           (p21-activated kinase 1) (PAK-1) (P65-PAK) (Alpha-PAK)
          Length = 545

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +3

Query: 24  TEPNPPPREEGKKKLGFLRDFLPG 95
           ++P PP  EE KKK  F R  LPG
Sbjct: 38  SKPLPPNPEEKKKKDRFYRSILPG 61


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.134    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,639,315
Number of Sequences: 219361
Number of extensions: 555929
Number of successful extensions: 1490
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1489
length of database: 80,573,946
effective HSP length: 42
effective length of database: 71,360,784
effective search space used: 1712658816
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)