>gb|M95746.1|WHTSTPCDN Wheat (clone p80k-16) initiation factor isozyme 4F p82 subunit mRNA
           sequence
          Length = 2863

 Score =  198 bits (100), Expect = 5e-48
 Identities = 118/124 (95%)
 Strand = Plus / Plus

                                                                       
Query: 77  ccgcgatttcctccccggcgccccgccgattccctgtcgatcgagctgccgcggtgcctt 136
           |||||||||||||| ||||  ||||||||||||||||||||||||||| |||||||||||
Sbjct: 1   ccgcgatttcctcctcggccgcccgccgattccctgtcgatcgagctgtcgcggtgcctt 60

                                                                       
Query: 137 ggtcgggttcgggaccctcagccatgacgacagaccagccagtgatcagcctgcgccccg 196
           |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ggtcggattcggcaccctcagccatgacgacagaccagccagtgatcagcctgcgccccg 120

               
Query: 197 gcgg 200
           ||||
Sbjct: 121 gcgg 124

>gb|M95747.1|WHTIF4F82B Wheat (clone p80k-34) initiation factor isozyme 4F p82 subunit
           mRNA, complete cds
          Length = 2887

 Score =  198 bits (100), Expect = 5e-48
 Identities = 118/124 (95%)
 Strand = Plus / Plus

                                                                       
Query: 77  ccgcgatttcctccccggcgccccgccgattccctgtcgatcgagctgccgcggtgcctt 136
           |||||||||||||| ||||  ||||||||||||||||||||||||||| |||||||||||
Sbjct: 1   ccgcgatttcctcctcggccgcccgccgattccctgtcgatcgagctgtcgcggtgcctt 60

                                                                       
Query: 137 ggtcgggttcgggaccctcagccatgacgacagaccagccagtgatcagcctgcgccccg 196
           |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ggtcggattcggcaccctcagccatgacgacagaccagccagtgatcagcctgcgccccg 120

               
Query: 197 gcgg 200
           ||||
Sbjct: 121 gcgg 124

>gb|AC103849.3| Homo sapiens chromosome 8, clone RP11-75H14, complete sequence
          Length = 147107

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 165   gacagaccagccagtgatca 184
             ||||||||||||||||||||
Sbjct: 15395 gacagaccagccagtgatca 15376

>gb|AC107952.5| Homo sapiens chromosome 8, clone RP11-140I16, complete sequence
          Length = 142102

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 165    gacagaccagccagtgatca 184
              ||||||||||||||||||||
Sbjct: 106152 gacagaccagccagtgatca 106133

>ref|XM_466679.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2486

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 178 gtgatcagcctgcgccccggcgg 200
           ||||||||||||||||| |||||
Sbjct: 80  gtgatcagcctgcgcccgggcgg 102

>ref|XM_473052.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2382

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                          
Query: 170 accagccagtgatcagcctgcgccccggcgg 200
           ||||||| || |||||| |||||||||||||
Sbjct: 14  accagcccgtcatcagcttgcgccccggcgg 44

>gb|AF099926.3| Caenorhabditis elegans cosmid T06A10, complete sequence
          Length = 41278

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 113  tcgatcgagctgccgcggt 131
            |||||||||||||||||||
Sbjct: 8429 tcgatcgagctgccgcggt 8447

>gb|AC137004.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0615D12,
              complete sequence
          Length = 155402

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 72     ttcctccgcgatttcctcc 90
              |||||||||||||||||||
Sbjct: 119475 ttcctccgcgatttcctcc 119457

>gb|AC157566.6| Mus musculus chromosome 15, clone RP23-415D19, complete sequence
          Length = 196738

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 28   aacccaaccctcccccaag 46
            |||||||||||||||||||
Sbjct: 4665 aacccaaccctcccccaag 4683

>gb|AC146115.2| Pan troglodytes BAC clone RP43-38M17 from 7, complete sequence
          Length = 204127

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 30     cccaaccctcccccaagag 48
              |||||||||||||||||||
Sbjct: 142349 cccaaccctcccccaagag 142331

>gb|AC124775.4| Mus musculus BAC clone RP23-60N3 from 7, complete sequence
          Length = 234834

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 33    aaccctcccccaagagaag 51
             |||||||||||||||||||
Sbjct: 71536 aaccctcccccaagagaag 71554

>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02,
             complete sequence
          Length = 173171

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                            
Query: 170   accagccagtgatcagcctgcgccccggcgg 200
             ||||||| || |||||| |||||||||||||
Sbjct: 47877 accagcccgtcatcagcttgcgccccggcgg 47847

>gb|AC122158.17| Mus musculus strain 129/Sv clone ct7-433o3 map 15, complete sequence
          Length = 135612

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 28    aacccaaccctcccccaag 46
             |||||||||||||||||||
Sbjct: 73612 aacccaaccctcccccaag 73630

>gb|AC073130.3| Homo sapiens BAC clone RP11-667F14 from 7, complete sequence
          Length = 203403

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 30    cccaaccctcccccaagag 48
             |||||||||||||||||||
Sbjct: 61178 cccaaccctcccccaagag 61196

>gb|AY224450.1| Oryza sativa (japonica cultivar-group) isolate 23225 eukaryotic
           initiation factor-like protein mRNA, complete cds
          Length = 2379

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                          
Query: 170 accagccagtgatcagcctgcgccccggcgg 200
           ||||||| || |||||| |||||||||||||
Sbjct: 14  accagcccgtcatcagcttgcgccccggcgg 44

>ref|NM_070597.2| Caenorhabditis elegans Maternal Effect Lethal family member
           (mel-46) (mel-46) mRNA, complete cds
          Length = 2959

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 113 tcgatcgagctgccgcggt 131
           |||||||||||||||||||
Sbjct: 50  tcgatcgagctgccgcggt 32

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                               
Query: 170      accagccagtgatcagcctgcgccccggcgg 200
                ||||||| || |||||| |||||||||||||
Sbjct: 24927292 accagcccgtcatcagcttgcgccccggcgg 24927262

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 72       ttcctccgcgatttcctcc 90
                |||||||||||||||||||
Sbjct: 20966115 ttcctccgcgatttcctcc 20966097

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 72       ttcctccgcgatttcctcc 90
                |||||||||||||||||||
Sbjct: 21728299 ttcctccgcgatttcctcc 21728281

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 178      gtgatcagcctgcgccccggcgg 200
                ||||||||||||||||| |||||
Sbjct: 24094046 gtgatcagcctgcgcccgggcgg 24094024

>gb|AC156550.5| Mus musculus chromosome 15, clone RP23-353K7, complete sequence
          Length = 205302

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 28   aacccaaccctcccccaag 46
            |||||||||||||||||||
Sbjct: 8822 aacccaaccctcccccaag 8804

>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1274F11
          Length = 171257

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 72    ttcctccgcgatttcctcc 90
             |||||||||||||||||||
Sbjct: 58204 ttcctccgcgatttcctcc 58186

>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1004_A05
          Length = 174290

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 178   gtgatcagcctgcgccccggcgg 200
             ||||||||||||||||| |||||
Sbjct: 52787 gtgatcagcctgcgcccgggcgg 52765

>dbj|AK072083.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118N03, full
           insert sequence
          Length = 3014

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 178 gtgatcagcctgcgccccggcgg 200
           ||||||||||||||||| |||||
Sbjct: 80  gtgatcagcctgcgcccgggcgg 102

>emb|AM156961.1| Oryza glaberrima mRNA for putative eukaryotic translation
           initiation factor 4 gamma (eif(iso)4g gene), cultivar
           Tog5672
          Length = 2558

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                          
Query: 170 accagccagtgatcagcctgcgccccggcgg 200
           ||||||| || |||||| |||||||||||||
Sbjct: 127 accagcccgtcatcagcttgcgccccggcgg 157

>emb|AM156960.1| Oryza glaberrima mRNA for putative eukaryotic translation
           initiation factor 4 gamma (eif(iso)4g gene), cultivar
           Tog5673
          Length = 2533

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                          
Query: 170 accagccagtgatcagcctgcgccccggcgg 200
           ||||||| || |||||| |||||||||||||
Sbjct: 127 accagcccgtcatcagcttgcgccccggcgg 157

>emb|AM156959.1| Oryza glaberrima mRNA for putative eukaryotic translation
           initiation factor 4 gamma (eif(iso)4g gene), cultivar
           Tog5681
          Length = 2699

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                          
Query: 170 accagccagtgatcagcctgcgccccggcgg 200
           ||||||| || |||||| |||||||||||||
Sbjct: 127 accagcccgtcatcagcttgcgccccggcgg 157

>emb|AM156958.1| Oryza sativa (indica cultivar-group) mRNA for putative eukaryotic
           translation initiation factor 4 gamma (eif(iso)4g gene),
           cultivar Gigante
          Length = 2599

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                          
Query: 170 accagccagtgatcagcctgcgccccggcgg 200
           ||||||| || |||||| |||||||||||||
Sbjct: 24  accagcccgtcatcagcttgcgccccggcgg 54

>emb|AM156957.1| Oryza sativa (indica cultivar-group) mRNA for putative eukaryotic
           translation initiation factor 4 gamma (eif(iso)4g gene),
           cultivar IR64
          Length = 2599

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                          
Query: 170 accagccagtgatcagcctgcgccccggcgg 200
           ||||||| || |||||| |||||||||||||
Sbjct: 17  accagcccgtcatcagcttgcgccccggcgg 47

>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete
             sequence
          Length = 148644

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                            
Query: 170   accagccagtgatcagcctgcgccccggcgg 200
             ||||||| || |||||| |||||||||||||
Sbjct: 55378 accagcccgtcatcagcttgcgccccggcgg 55348

>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 169    gaccagccagtgatcagcc 187
              |||||||||||||||||||
Sbjct: 578741 gaccagccagtgatcagcc 578759


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,057,054
Number of Sequences: 3902068
Number of extensions: 1057054
Number of successful extensions: 67142
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66947
Number of HSP's gapped (non-prelim): 195
length of query: 200
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 178
effective length of database: 17,147,199,772
effective search space: 3052201559416
effective search space used: 3052201559416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)