ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl31g11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 0.59
2gb|AC118674.3| Genomic sequence for Oryza sativa, Nipponbare str... 42 0.59
3gb|AE009815.1|AE009815 Pyrobaculum aerophilum strain IM2 section... 42 0.59
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.59
5ref|XM_419187.1| PREDICTED: Gallus gallus similar to dystrobrevi... 40 2.3
6gb|DQ480419.1| Hylobates lar isolate Gibbon2 CMT1A pseudogene, c... 40 2.3
7gb|DQ480418.1| Hylobates lar isolate Gibbon1 CMT1A pseudogene, c... 40 2.3
8gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 2.3
9emb|AL954848.9| Zebrafish DNA sequence from clone CH211-281G7, c... 40 2.3
10gb|AC166238.7| Mus musculus chromosome 1, clone RP23-469H11, com... 38 9.3
11ref|XM_472310.1| Oryza sativa (japonica cultivar-group), predic... 38 9.3
12gb|DQ075318.1| Homo sapiens CMT1A-REP distal repeat T1 allele 2 ... 38 9.3
13gb|DQ075317.1| Homo sapiens CMT1A-REP distal repeat T1 allele 1 ... 38 9.3
14gb|BT015953.1| Drosophila melanogaster SD09647 full insert cDNA 38 9.3
15gb|DQ480415.1| Gorilla gorilla isolate Gorilla2 CMT1A pseudogene... 38 9.3
16gb|DQ480414.1| Gorilla gorilla isolate Gorilla1 CMT1A pseudogene... 38 9.3
17gb|DQ480413.1| Pan troglodytes isolate Chimp_D2 CMT1A pseudogene... 38 9.3
18gb|DQ480412.1| Pan troglodytes isolate Chimp_D1 CMT1A pseudogene... 38 9.3
19gb|DQ480411.1| Pan troglodytes isolate Chimp_P2 CMT1A pseudogene... 38 9.3
20gb|DQ480410.1| Pan troglodytes isolate Chimp_P1 CMT1A pseudogene... 38 9.3
21gb|DQ480408.1| Homo sapiens isolate AUS2_D2 CMT1A pseudogene, co... 38 9.3
22gb|DQ480407.1| Homo sapiens isolate ZUL1_D1 CMT1A pseudogene, co... 38 9.3
23gb|DQ480406.1| Homo sapiens isolate ZUL1_D2 CMT1A pseudogene, co... 38 9.3
24gb|DQ480402.1| Homo sapiens isolate JAP_D2 CMT1A pseudogene, com... 38 9.3
25gb|DQ480401.1| Homo sapiens isolate ZUL2_D2 CMT1A pseudogene, co... 38 9.3
26gb|DQ480400.1| Homo sapiens isolate ZUL2_D1 CMT1A pseudogene, co... 38 9.3
27gb|DQ480399.1| Homo sapiens isolate CAU1_D2 CMT1A pseudogene, co... 38 9.3
28gb|DQ480397.1| Homo sapiens isolate CAU2_D2 CMT1A pseudogene, co... 38 9.3
29gb|DQ480396.1| Homo sapiens isolate CAU2_D1 CMT1A pseudogene, co... 38 9.3
30gb|DQ480395.1| Homo sapiens isolate AUS1_D2 CMT1A pseudogene, co... 38 9.3
31gb|DQ480392.1| Homo sapiens isolate ITA_D1 CMT1A pseudogene, com... 38 9.3
32gb|DQ480391.1| Homo sapiens isolate AME2_D2 CMT1A pseudogene, co... 38 9.3
33gb|DQ480389.1| Homo sapiens isolate AUS2_P2 CMT1A pseudogene, co... 38 9.3
34gb|DQ480388.1| Homo sapiens isolate AUS2_P1 CMT1A pseudogene, co... 38 9.3
35gb|DQ480387.1| Homo sapiens isolate ZUL1_P2 CMT1A pseudogene, co... 38 9.3
36gb|DQ480386.1| Homo sapiens isolate ZUL1_P1 CMT1A pseudogene, co... 38 9.3
37gb|DQ480385.1| Homo sapiens isolate AME1_P2 CMT1A pseudogene, co... 38 9.3
38gb|DQ480384.1| Homo sapiens isolate AME1_P1 CMT1A pseudogene, co... 38 9.3
39gb|DQ480383.1| Homo sapiens isolate JAP_P2 CMT1A pseudogene, com... 38 9.3
40gb|DQ480382.1| Homo sapiens isolate JAP_P1 CMT1A pseudogene, com... 38 9.3
41gb|DQ480381.1| Homo sapiens isolate ZUL2_P2 CMT1A pseudogene, co... 38 9.3
42gb|DQ480380.1| Homo sapiens isolate ZUL2_P1 CMT1A pseudogene, co... 38 9.3
43gb|DQ480379.1| Homo sapiens isolate CAU1_P2 CMT1A pseudogene, co... 38 9.3
44gb|DQ480378.1| Homo sapiens isolate CAU1_P1 CMT1A pseudogene, co... 38 9.3
45gb|DQ480377.1| Homo sapiens isolate CAU2_P2 CMT1A pseudogene, co... 38 9.3
46gb|DQ480376.1| Homo sapiens isolate CAU2_P1 CMT1A pseudogene, co... 38 9.3
47gb|DQ480375.1| Homo sapiens isolate AUS1_P2 CMT1A pseudogene, co... 38 9.3
48gb|DQ480374.1| Homo sapiens isolate AUS1_P1 CMT1A pseudogene, co... 38 9.3
49gb|DQ480373.1| Homo sapiens isolate ITA_P2 CMT1A pseudogene, com... 38 9.3
50gb|DQ480372.1| Homo sapiens isolate ITA_P1 CMT1A pseudogene, com... 38 9.3
51gb|DQ480371.1| Homo sapiens isolate AME2_P2 CMT1A pseudogene, co... 38 9.3
52gb|DQ480370.1| Homo sapiens isolate AME2_P1 CMT1A pseudogene, co... 38 9.3
53ref|XM_657581.1| Aspergillus nidulans FGSC A4 hypothetical prote... 38 9.3
54ref|XM_846877.1| PREDICTED: Canis familiaris similar to X Kell b... 38 9.3
55gb|BT025193.1| Drosophila melanogaster FI01127 full insert cDNA 38 9.3
56emb|AL606621.3|OSJN00054 Oryza sativa genomic DNA, chromosome 4,... 38 9.3
57emb|AJ248285.1|CNSPAX03 Pyrococcus abyssi complete genome; segme... 38 9.3
58gb|AC183294.3| Pan troglodytes BAC clone CH251-545A24 from chrom... 38 9.3
59gb|AC018989.15| Homo sapiens chromosome 17, clone RP11-273K13, c... 38 9.3
60gb|AC005838.2| Homo sapiens chromosome 17, clone RP11-385D13, co... 38 9.3
61gb|AY070708.1| Drosophila melanogaster SD01032 full length cDNA 38 9.3
62gb|AC015729.10| Homo sapiens, clone RP11-1A20, complete sequence 38 9.3
63gb|S62220.1| polyprotein [Hepatitis C virus, Japanese variant, s... 38 9.3
64dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.3
65dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.3
66dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome 38 9.3
67gb|AC010478.5|AC010478 Homo sapiens chromosome 5 clone CTD-2314G... 38 9.3
68dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic D... 38 9.3
69emb|AL512360.2|CNS07EF9 Human chromosome 14 DNA sequence BAC R-7... 38 9.3
70dbj|AK063305.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 9.3
71emb|AL358336.4|CNS05TE7 Human chromosome 14 DNA sequence BAC R-5... 38 9.3
72gb|U71218.1|HSU71218 Human clone c74F4, 24Kb proximal CMT1A-REP ... 38 9.3
73gb|U71217.1|HSU71217 Human clone c15H12, 24Kb distal CMT1A-REP s... 38 9.3
74gb|AC005224.1|AC005224 Homo sapiens chromosome 17, clone hRPK.21... 38 9.3
75gb|AC005324.1|AC005324 Homo sapiens chromosome 17, clone hRPK.64... 38 9.3
76gb|U48216.1|HSU48216 Human distal CMT1A-REP repeat, centromeric ... 38 9.3
77gb|U48215.1|HSU48215 Human proximal CMT1A-REP repeat, centromeri... 38 9.3
78gb|AC132909.14| Mus musculus chromosome 1, clone RP24-298H1, com... 38 9.3
79emb|AL670035.15| Mouse DNA sequence from clone RP23-295C20 on ch... 38 9.3
80gb|AC091860.3| Homo sapiens chromosome 5 clone CTD-2335O3, compl... 38 9.3 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 0.59
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 77       tcctgccgcccctccccctct 97
                |||||||||||||||||||||
Sbjct: 11714115 tcctgccgcccctccccctct 11714135
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>gb|AC118674.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0093J20, from chromosome 3, complete sequence
          Length = 148635

 Score = 42.1 bits (21), Expect = 0.59
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 77     tcctgccgcccctccccctct 97
              |||||||||||||||||||||
Sbjct: 103210 tcctgccgcccctccccctct 103230
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>gb|AE009815.1|AE009815 Pyrobaculum aerophilum strain IM2 section 70 of 201 of the complete
            genome
          Length = 14701

 Score = 42.1 bits (21), Expect = 0.59
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 74   gattcctgccgcccctccccc 94
            |||||||||||||||||||||
Sbjct: 6455 gattcctgccgcccctccccc 6475
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 0.59
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 77       tcctgccgcccctccccctct 97
                |||||||||||||||||||||
Sbjct: 11710878 tcctgccgcccctccccctct 11710898
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>ref|XM_419187.1| PREDICTED: Gallus gallus similar to dystrobrevin alpha isoform 1;
            dystrophin-related protein 3 (LOC421104), mRNA
          Length = 3914

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 27   agtcctcctgctcccatggg 46
            ||||||||||||||||||||
Sbjct: 1444 agtcctcctgctcccatggg 1463
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>gb|DQ480419.1| Hylobates lar isolate Gibbon2 CMT1A pseudogene, complete sequence
          Length = 24334

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 19  acaccaccagtcctcctgctccca 42
           |||||||||| |||||||||||||
Sbjct: 830 acaccaccagccctcctgctccca 807
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>gb|DQ480418.1| Hylobates lar isolate Gibbon1 CMT1A pseudogene, complete sequence
          Length = 24338

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 19  acaccaccagtcctcctgctccca 42
           |||||||||| |||||||||||||
Sbjct: 830 acaccaccagccctcctgctccca 807
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 99     gagcttcggggcggcgaggcgcgc 122
              ||||||| ||||||||||||||||
Sbjct: 262908 gagcttccgggcggcgaggcgcgc 262931
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>emb|AL954848.9| Zebrafish DNA sequence from clone CH211-281G7, complete sequence
          Length = 170178

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 15     tgcaacaccaccagtcctcc 34
              ||||||||||||||||||||
Sbjct: 103753 tgcaacaccaccagtcctcc 103734
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>gb|AC166238.7| Mus musculus chromosome 1, clone RP23-469H11, complete sequence
          Length = 181980

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 80    tgccgcccctccccctctg 98
             |||||||||||||||||||
Sbjct: 16375 tgccgcccctccccctctg 16357
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>ref|XM_472310.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1989

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 126 gaggcaatgggggtggcgc 144
           |||||||||||||||||||
Sbjct: 56  gaggcaatgggggtggcgc 74
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>gb|DQ075318.1| Homo sapiens CMT1A-REP distal repeat T1 allele 2 sequence
          Length = 11367

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 19    acaccaccagtcctcctgctccc 41
             |||||||||| ||||||||||||
Sbjct: 10187 acaccaccagccctcctgctccc 10209
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>gb|DQ075317.1| Homo sapiens CMT1A-REP distal repeat T1 allele 1 sequence
          Length = 11364

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 19    acaccaccagtcctcctgctccc 41
             |||||||||| ||||||||||||
Sbjct: 10190 acaccaccagccctcctgctccc 10212
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>gb|BT015953.1| Drosophila melanogaster SD09647 full insert cDNA
          Length = 2972

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 69  tcggggattcctgccgccc 87
           |||||||||||||||||||
Sbjct: 723 tcggggattcctgccgccc 741
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>gb|DQ480415.1| Gorilla gorilla isolate Gorilla2 CMT1A pseudogene, complete
           sequence
          Length = 23823

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 829 acaccaccagccctcctgctccc 807
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>gb|DQ480414.1| Gorilla gorilla isolate Gorilla1 CMT1A pseudogene, complete
           sequence
          Length = 23823

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 829 acaccaccagccctcctgctccc 807
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>gb|DQ480413.1| Pan troglodytes isolate Chimp_D2 CMT1A pseudogene, complete
           sequence
          Length = 25916

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 824 acaccaccagccctcctgctccc 802
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>gb|DQ480412.1| Pan troglodytes isolate Chimp_D1 CMT1A pseudogene, complete
           sequence
          Length = 25905

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 824 acaccaccagccctcctgctccc 802
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>gb|DQ480411.1| Pan troglodytes isolate Chimp_P2 CMT1A pseudogene, complete
           sequence
          Length = 23827

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 824 acaccaccagccctcctgctccc 802
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>gb|DQ480410.1| Pan troglodytes isolate Chimp_P1 CMT1A pseudogene, complete
           sequence
          Length = 23848

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 828 acaccaccagccctcctgctccc 806
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>gb|DQ480408.1| Homo sapiens isolate AUS2_D2 CMT1A pseudogene, complete sequence
          Length = 23806

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 828 acaccaccagccctcctgctccc 806
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>gb|DQ480407.1| Homo sapiens isolate ZUL1_D1 CMT1A pseudogene, complete sequence
          Length = 23808

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 828 acaccaccagccctcctgctccc 806
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>gb|DQ480406.1| Homo sapiens isolate ZUL1_D2 CMT1A pseudogene, complete sequence
          Length = 23804

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 828 acaccaccagccctcctgctccc 806
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>gb|DQ480402.1| Homo sapiens isolate JAP_D2 CMT1A pseudogene, complete sequence
          Length = 23801

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 828 acaccaccagccctcctgctccc 806
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>gb|DQ480401.1| Homo sapiens isolate ZUL2_D2 CMT1A pseudogene, complete sequence
          Length = 23809

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 828 acaccaccagccctcctgctccc 806
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>gb|DQ480400.1| Homo sapiens isolate ZUL2_D1 CMT1A pseudogene, complete sequence
          Length = 23821

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 828 acaccaccagccctcctgctccc 806
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>gb|DQ480399.1| Homo sapiens isolate CAU1_D2 CMT1A pseudogene, complete sequence
          Length = 23799

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 825 acaccaccagccctcctgctccc 803
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>gb|DQ480397.1| Homo sapiens isolate CAU2_D2 CMT1A pseudogene, complete sequence
          Length = 23803

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 828 acaccaccagccctcctgctccc 806
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>gb|DQ480396.1| Homo sapiens isolate CAU2_D1 CMT1A pseudogene, complete sequence
          Length = 23804

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 828 acaccaccagccctcctgctccc 806
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>gb|DQ480395.1| Homo sapiens isolate AUS1_D2 CMT1A pseudogene, complete sequence
          Length = 23793

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 828 acaccaccagccctcctgctccc 806
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>gb|DQ480392.1| Homo sapiens isolate ITA_D1 CMT1A pseudogene, complete sequence
          Length = 23801

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 828 acaccaccagccctcctgctccc 806
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>gb|DQ480391.1| Homo sapiens isolate AME2_D2 CMT1A pseudogene, complete sequence
          Length = 23823

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 828 acaccaccagccctcctgctccc 806
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>gb|DQ480389.1| Homo sapiens isolate AUS2_P2 CMT1A pseudogene, complete sequence
          Length = 23810

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 829 acaccaccagccctcctgctccc 807
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>gb|DQ480388.1| Homo sapiens isolate AUS2_P1 CMT1A pseudogene, complete sequence
          Length = 23812

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 829 acaccaccagccctcctgctccc 807
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>gb|DQ480387.1| Homo sapiens isolate ZUL1_P2 CMT1A pseudogene, complete sequence
          Length = 23808

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 828 acaccaccagccctcctgctccc 806
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>gb|DQ480386.1| Homo sapiens isolate ZUL1_P1 CMT1A pseudogene, complete sequence
          Length = 23804

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 828 acaccaccagccctcctgctccc 806
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>gb|DQ480385.1| Homo sapiens isolate AME1_P2 CMT1A pseudogene, complete sequence
          Length = 23810

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 828 acaccaccagccctcctgctccc 806
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>gb|DQ480384.1| Homo sapiens isolate AME1_P1 CMT1A pseudogene, complete sequence
          Length = 23808

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 828 acaccaccagccctcctgctccc 806
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>gb|DQ480383.1| Homo sapiens isolate JAP_P2 CMT1A pseudogene, complete sequence
          Length = 23809

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 828 acaccaccagccctcctgctccc 806
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>gb|DQ480382.1| Homo sapiens isolate JAP_P1 CMT1A pseudogene, complete sequence
          Length = 23810

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 828 acaccaccagccctcctgctccc 806
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>gb|DQ480381.1| Homo sapiens isolate ZUL2_P2 CMT1A pseudogene, complete sequence
          Length = 23805

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 828 acaccaccagccctcctgctccc 806
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>gb|DQ480380.1| Homo sapiens isolate ZUL2_P1 CMT1A pseudogene, complete sequence
          Length = 23804

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 828 acaccaccagccctcctgctccc 806
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>gb|DQ480379.1| Homo sapiens isolate CAU1_P2 CMT1A pseudogene, complete sequence
          Length = 23809

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 828 acaccaccagccctcctgctccc 806
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>gb|DQ480378.1| Homo sapiens isolate CAU1_P1 CMT1A pseudogene, complete sequence
          Length = 23800

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 828 acaccaccagccctcctgctccc 806
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>gb|DQ480377.1| Homo sapiens isolate CAU2_P2 CMT1A pseudogene, complete sequence
          Length = 23807

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 828 acaccaccagccctcctgctccc 806
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>gb|DQ480376.1| Homo sapiens isolate CAU2_P1 CMT1A pseudogene, complete sequence
          Length = 23804

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 828 acaccaccagccctcctgctccc 806
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>gb|DQ480375.1| Homo sapiens isolate AUS1_P2 CMT1A pseudogene, complete sequence
          Length = 23810

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 820 acaccaccagccctcctgctccc 798
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>gb|DQ480374.1| Homo sapiens isolate AUS1_P1 CMT1A pseudogene, complete sequence
          Length = 23810

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 820 acaccaccagccctcctgctccc 798
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>gb|DQ480373.1| Homo sapiens isolate ITA_P2 CMT1A pseudogene, complete sequence
          Length = 23804

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 828 acaccaccagccctcctgctccc 806
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>gb|DQ480372.1| Homo sapiens isolate ITA_P1 CMT1A pseudogene, complete sequence
          Length = 23810

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 828 acaccaccagccctcctgctccc 806
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>gb|DQ480371.1| Homo sapiens isolate AME2_P2 CMT1A pseudogene, complete sequence
          Length = 23808

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 828 acaccaccagccctcctgctccc 806
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>gb|DQ480370.1| Homo sapiens isolate AME2_P1 CMT1A pseudogene, complete sequence
          Length = 23806

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 828 acaccaccagccctcctgctccc 806
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>ref|XM_657581.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5069.2), mRNA
          Length = 1071

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 24  accagtcctcctgctccca 42
           |||||||||||||||||||
Sbjct: 181 accagtcctcctgctccca 163
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>ref|XM_846877.1| PREDICTED: Canis familiaris similar to X Kell blood group
           precursor-related, X-linked (LOC609590), mRNA
          Length = 1953

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 140 ggcgcggagggagcagcgg 158
           |||||||||||||||||||
Sbjct: 376 ggcgcggagggagcagcgg 394
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>gb|BT025193.1| Drosophila melanogaster FI01127 full insert cDNA
          Length = 2971

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 69  tcggggattcctgccgccc 87
           |||||||||||||||||||
Sbjct: 723 tcggggattcctgccgccc 741
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>emb|AL606621.3|OSJN00054 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072K14,
             complete sequence
          Length = 139855

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 126   gaggcaatgggggtggcgc 144
             |||||||||||||||||||
Sbjct: 28287 gaggcaatgggggtggcgc 28305
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>emb|AJ248285.1|CNSPAX03 Pyrococcus abyssi complete genome; segment 3/6
          Length = 307120

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 21     accaccagtcctcctgctc 39
              |||||||||||||||||||
Sbjct: 182582 accaccagtcctcctgctc 182600
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>gb|AC183294.3| Pan troglodytes BAC clone CH251-545A24 from chromosome 17, complete
              sequence
          Length = 173991

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 19     acaccaccagtcctcctgctccc 41
              |||||||||| ||||||||||||
Sbjct: 114574 acaccaccagccctcctgctccc 114552
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>gb|AC018989.15| Homo sapiens chromosome 17, clone RP11-273K13, complete sequence
          Length = 162066

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 19    acaccaccagtcctcctgctccc 41
             |||||||||| ||||||||||||
Sbjct: 36367 acaccaccagccctcctgctccc 36389
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>gb|AC005838.2| Homo sapiens chromosome 17, clone RP11-385D13, complete sequence
          Length = 67791

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 19  acaccaccagtcctcctgctccc 41
           |||||||||| ||||||||||||
Sbjct: 922 acaccaccagccctcctgctccc 900
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>gb|AY070708.1| Drosophila melanogaster SD01032 full length cDNA
          Length = 2647

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 69  tcggggattcctgccgccc 87
           |||||||||||||||||||
Sbjct: 400 tcggggattcctgccgccc 418
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>gb|AC015729.10| Homo sapiens, clone RP11-1A20, complete sequence
          Length = 153392

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 80    tgccgcccctccccctctg 98
             |||||||||||||||||||
Sbjct: 76805 tgccgcccctccccctctg 76823
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>gb|S62220.1| polyprotein [Hepatitis C virus, Japanese variant, strain=human
           hepatitis C virus HCV-N, Genomic RNA Complete, 9440 nt]
          Length = 9440

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 167 cctcctgtgggcggcggtt 185
           |||||||||||||||||||
Sbjct: 404 cctcctgtgggcggcggtt 386
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 126      gaggcaatgggggtggcgc 144
                |||||||||||||||||||
Sbjct: 19377034 gaggcaatgggggtggcgc 19377052
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 81       gccgcccctccccctctgg 99
                |||||||||||||||||||
Sbjct: 25646244 gccgcccctccccctctgg 25646226
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>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome
          Length = 2088737

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 21      accaccagtcctcctgctc 39
               |||||||||||||||||||
Sbjct: 1117676 accaccagtcctcctgctc 1117658
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>gb|AC010478.5|AC010478 Homo sapiens chromosome 5 clone CTD-2314G24, complete sequence
          Length = 126852

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 78     cctgccgcccctccccctc 96
              |||||||||||||||||||
Sbjct: 115338 cctgccgcccctccccctc 115320
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>dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0458E02
          Length = 154458

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 81    gccgcccctccccctctgg 99
             |||||||||||||||||||
Sbjct: 69689 gccgcccctccccctctgg 69671
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>emb|AL512360.2|CNS07EF9 Human chromosome 14 DNA sequence BAC R-737F10 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 192972

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 80    tgccgcccctccccctctg 98
             |||||||||||||||||||
Sbjct: 21215 tgccgcccctccccctctg 21197
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>dbj|AK063305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-F09, full
           insert sequence
          Length = 2022

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 126 gaggcaatgggggtggcgc 144
           |||||||||||||||||||
Sbjct: 324 gaggcaatgggggtggcgc 342
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>emb|AL358336.4|CNS05TE7 Human chromosome 14 DNA sequence BAC R-514D2 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 177669

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 80    tgccgcccctccccctctg 98
             |||||||||||||||||||
Sbjct: 29001 tgccgcccctccccctctg 29019
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>gb|U71218.1|HSU71218 Human clone c74F4, 24Kb proximal CMT1A-REP sequence
          Length = 34240

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 19   acaccaccagtcctcctgctccc 41
            |||||||||| ||||||||||||
Sbjct: 9425 acaccaccagccctcctgctccc 9403
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>gb|U71217.1|HSU71217 Human clone c15H12, 24Kb distal CMT1A-REP sequence
          Length = 39906

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 19    acaccaccagtcctcctgctccc 41
             |||||||||| ||||||||||||
Sbjct: 29561 acaccaccagccctcctgctccc 29583
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>gb|AC005224.1|AC005224 Homo sapiens chromosome 17, clone hRPK.214_O_1, complete sequence
          Length = 166687

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 19     acaccaccagtcctcctgctccc 41
              |||||||||| ||||||||||||
Sbjct: 154629 acaccaccagccctcctgctccc 154607
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>gb|AC005324.1|AC005324 Homo sapiens chromosome 17, clone hRPK.640_I_15, complete sequence
          Length = 176643

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 19     acaccaccagtcctcctgctccc 41
              |||||||||| ||||||||||||
Sbjct: 174455 acaccaccagccctcctgctccc 174433
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>gb|U48216.1|HSU48216 Human distal CMT1A-REP repeat, centromeric end and flanking sequence
          Length = 2446

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 19   acaccaccagtcctcctgctccc 41
            |||||||||| ||||||||||||
Sbjct: 1309 acaccaccagccctcctgctccc 1287
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>gb|U48215.1|HSU48215 Human proximal CMT1A-REP repeat, centromeric end and flanking
            sequence
          Length = 1749

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 19   acaccaccagtcctcctgctccc 41
            |||||||||| ||||||||||||
Sbjct: 1301 acaccaccagccctcctgctccc 1279
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>gb|AC132909.14| Mus musculus chromosome 1, clone RP24-298H1, complete sequence
          Length = 185140

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 80    tgccgcccctccccctctg 98
             |||||||||||||||||||
Sbjct: 74842 tgccgcccctccccctctg 74860
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>emb|AL670035.15| Mouse DNA sequence from clone RP23-295C20 on chromosome 4, complete
             sequence
          Length = 201142

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 153   cagcgggctgcccccctcc 171
             |||||||||||||||||||
Sbjct: 15475 cagcgggctgcccccctcc 15457
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>gb|AC091860.3| Homo sapiens chromosome 5 clone CTD-2335O3, complete sequence
          Length = 100348

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 78    cctgccgcccctccccctc 96
             |||||||||||||||||||
Sbjct: 77066 cctgccgcccctccccctc 77084


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,369,853
Number of Sequences: 3902068
Number of extensions: 1369853
Number of successful extensions: 107900
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107202
Number of HSP's gapped (non-prelim): 698
length of query: 188
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 166
effective length of database: 17,147,199,772
effective search space: 2846435162152
effective search space used: 2846435162152
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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