ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl31g10 |
|---|---|
| Clone Library Name | barley_pub |
>COPB_DROME (P45437) Coatomer subunit beta (Beta-coat protein) (Beta-COP)| Length = 964 Score = 82.4 bits (202), Expect = 4e-16 Identities = 38/90 (42%), Positives = 58/90 (64%) Frame = +3 Query: 168 PCTLLVHFDKGSAAMANEIKADLEGSDVAAKVEAMKRAVMLLLNGETLPTLFITVVRYVL 347 PC +++ ++K DLE D K+E +KR + LLLNGE P L +T++R+VL Sbjct: 6 PCYTIINSPDLEVTNEMQLKRDLEKGDTNVKIETLKRVIKLLLNGERYPGLIMTIIRFVL 65 Query: 348 PSEDHTIQKLLLLYLEIIDKRDAAGRVLPE 437 P ++HTI+KLLL++ EI+ K A G++L E Sbjct: 66 PVQNHTIKKLLLIFWEIVPKTSADGKLLQE 95
>COPB_RAT (P23514) Coatomer subunit beta (Beta-coat protein) (Beta-COP)| Length = 953 Score = 82.4 bits (202), Expect = 4e-16 Identities = 41/95 (43%), Positives = 63/95 (66%), Gaps = 1/95 (1%) Frame = +3 Query: 156 AMDKPCTLLVHFDKGSAAMAN-EIKADLEGSDVAAKVEAMKRAVMLLLNGETLPTLFITV 332 A + C L++ S + +K DLE DV +K EA+K+ ++++LNGE LP L +T+ Sbjct: 3 AAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLMTI 62 Query: 333 VRYVLPSEDHTIQKLLLLYLEIIDKRDAAGRVLPE 437 +R+VLP +DHTI+KLLL++ EI+ K GR+L E Sbjct: 63 IRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHE 97
>COPB_MOUSE (Q9JIF7) Coatomer subunit beta (Beta-coat protein) (Beta-COP)| Length = 953 Score = 82.4 bits (202), Expect = 4e-16 Identities = 41/95 (43%), Positives = 63/95 (66%), Gaps = 1/95 (1%) Frame = +3 Query: 156 AMDKPCTLLVHFDKGSAAMAN-EIKADLEGSDVAAKVEAMKRAVMLLLNGETLPTLFITV 332 A + C L++ S + +K DLE DV +K EA+K+ ++++LNGE LP L +T+ Sbjct: 3 AAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLMTI 62 Query: 333 VRYVLPSEDHTIQKLLLLYLEIIDKRDAAGRVLPE 437 +R+VLP +DHTI+KLLL++ EI+ K GR+L E Sbjct: 63 IRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHE 97
>COPB_HUMAN (P53618) Coatomer subunit beta (Beta-coat protein) (Beta-COP)| Length = 953 Score = 82.4 bits (202), Expect = 4e-16 Identities = 41/95 (43%), Positives = 63/95 (66%), Gaps = 1/95 (1%) Frame = +3 Query: 156 AMDKPCTLLVHFDKGSAAMAN-EIKADLEGSDVAAKVEAMKRAVMLLLNGETLPTLFITV 332 A + C L++ S + +K DLE DV +K EA+K+ ++++LNGE LP L +T+ Sbjct: 3 AAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLMTI 62 Query: 333 VRYVLPSEDHTIQKLLLLYLEIIDKRDAAGRVLPE 437 +R+VLP +DHTI+KLLL++ EI+ K GR+L E Sbjct: 63 IRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHE 97
>COPB_SCHPO (Q9UUF7) Coatomer subunit beta (Beta-coat protein) (Beta-COP)| Length = 940 Score = 58.5 bits (140), Expect = 7e-09 Identities = 29/89 (32%), Positives = 51/89 (57%) Frame = +3 Query: 171 CTLLVHFDKGSAAMANEIKADLEGSDVAAKVEAMKRAVMLLLNGETLPTLFITVVRYVLP 350 C LV D A + +K LE + K+ AMK + +++NG++LP++ + V+R+V+P Sbjct: 3 CWTLVQQDFLEAPSVDALKTSLESKNDYVKISAMKTILRVVINGDSLPSILMHVIRFVMP 62 Query: 351 SEDHTIQKLLLLYLEIIDKRDAAGRVLPE 437 S + ++KLL Y E+ K + G + E Sbjct: 63 SRNKELKKLLYYYWEVCPKYNNDGTMKQE 91
>COPB_YEAST (P41810) Coatomer subunit beta (Beta-coat protein) (Beta-COP)| Length = 973 Score = 49.3 bits (116), Expect = 4e-06 Identities = 25/71 (35%), Positives = 44/71 (61%) Frame = +3 Query: 225 KADLEGSDVAAKVEAMKRAVMLLLNGETLPTLFITVVRYVLPSEDHTIQKLLLLYLEIID 404 KA +GSD K++ MK ++ +L G +P L + ++R+V+PS++ ++KLL Y EI+ Sbjct: 30 KALEKGSD-EQKIDTMKSILVTMLEGNPMPELLMHIIRFVMPSKNKELKKLLYFYWEIVP 88 Query: 405 KRDAAGRVLPE 437 K G++ E Sbjct: 89 KLAEDGKLRHE 99
>MAM1_SCHPO (P78966) Mating factor M secretion protein mam1 (Multiple drug| resistance protein homolog) (P-glycoprotein) Length = 1336 Score = 31.2 bits (69), Expect = 1.2 Identities = 21/77 (27%), Positives = 40/77 (51%) Frame = +3 Query: 129 PARVHGRSGAMDKPCTLLVHFDKGSAAMANEIKADLEGSDVAAKVEAMKRAVMLLLNGET 308 P +H +SG + P + FD S A + + L ++V+ +EA ++ ++ ++G Sbjct: 1082 PGNLH-KSGYLKFPLVGKIEFDGVSFAYPDSERNHLALNNVSLSIEAREKVAIVGISGSG 1140 Query: 309 LPTLFITVVRYVLPSED 359 TL + ++R PSED Sbjct: 1141 KSTL-VELLRKTYPSED 1156
>SAHH3_MOUSE (Q68FL4) Putative adenosylhomocysteinase 3 (EC 3.3.1.1)| (S-adenosyl-L-homocysteine hydrolase 3) (AdoHcyase 3) Length = 613 Score = 30.8 bits (68), Expect = 1.5 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = +1 Query: 34 APVNHSPPLPAPRSRPTSAADPTT-NTPHAVALRR 135 AP PP P P S PT+A P P A A++R Sbjct: 56 APAAERPPAPGPGSGPTAALSPAAGKVPQASAMKR 90
>TEGU_EBV (P03186) Large tegument protein| Length = 3149 Score = 30.8 bits (68), Expect = 1.5 Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 2/44 (4%) Frame = +1 Query: 34 APVNHSPPLPAPRSRPTSAADPTTNT--PHAVALRRGCTADPAP 159 AP N PL P PT+AA PTT T P + +A PAP Sbjct: 510 APSNPKIPLTTPSPSPTAAAAPTTTTLSPPPTQQQPPQSAAPAP 553
>BARH1_DROAN (P22544) Homeobox protein B-H1 (Homeobox BarH1 protein)| Length = 606 Score = 30.8 bits (68), Expect = 1.5 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +1 Query: 37 PVNHSPPLPAPRSRPTSAADPTTN 108 P + SPPLP P +RP S PT N Sbjct: 558 PDSASPPLPLPLARPPSTPSPTLN 581
>PEP_DROME (P41073) Zinc finger protein on ecdysone puffs| Length = 716 Score = 30.4 bits (67), Expect = 2.0 Identities = 19/65 (29%), Positives = 22/65 (33%) Frame = +1 Query: 34 APVNHSPPLPAPRSRPTSAADPTTNTPHAVALRRGCTADPAPWXXXXXXXXXXXXXPPPW 213 AP +PP P PT AA P A A A P+P P Sbjct: 647 APAEPAPPAKTPAKTPTKAAAPAAVASPAAA-ATSADASPSPAKKATPARAAAGAKATPQ 705 Query: 214 RMRSR 228 R R+R Sbjct: 706 RQRAR 710
>IRS1_RAT (P35570) Insulin receptor substrate 1 (IRS-1) (pp185)| Length = 1235 Score = 30.4 bits (67), Expect = 2.0 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = +1 Query: 19 ASRLFAPVNHSPPLPAPRSRPTSAADPTTNTPHAVALRRGCTAD 150 +SRL P+NHS +P P SR + +A + + G T+D Sbjct: 357 SSRLHPPLNHSRSIPMPSSRCSPSATSPVSLSSSSTSGHGSTSD 400
>KC1G2_HUMAN (P78368) Casein kinase I isoform gamma-2 (EC 2.7.11.1) (CKI-gamma| 2) Length = 415 Score = 30.4 bits (67), Expect = 2.0 Identities = 21/64 (32%), Positives = 30/64 (46%) Frame = -1 Query: 227 LDLIRHGGGALVEVD*QRARLVHGAGSAVHPRRRATACGVLVVGSAAEVGRDLGAGRGGE 48 +D + GG E + +R G S+ R T+ GVL+VG VG+ +G G GE Sbjct: 1 MDFDKKGGKGETE-EGRRMSKAGGGRSSHGIRSSGTSSGVLMVGPNFRVGKKIGCGNFGE 59 Query: 47 WLTG 36 G Sbjct: 60 LRLG 63
>IRS1_MOUSE (P35569) Insulin receptor substrate 1 (IRS-1)| Length = 1233 Score = 30.4 bits (67), Expect = 2.0 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = +1 Query: 19 ASRLFAPVNHSPPLPAPRSRPTSAADPTTNTPHAVALRRGCTAD 150 +SRL P+NHS +P P SR + +A + + G T+D Sbjct: 357 SSRLHPPLNHSRSIPMPSSRCSPSATSPVSLSSSSTSGHGSTSD 400
>ISPE_MAGMM (Q2VYT6) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC| 2.7.1.148) (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) Length = 285 Score = 30.0 bits (66), Expect = 2.6 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%) Frame = +1 Query: 46 HSPPLPAPRSRPTSAADPTTNTP-------HAVALRRGCTADPA 156 H+PP+ R+ P SAADP T P A+A RR PA Sbjct: 177 HTPPVFKARTGPFSAADPLTAPPRDAKGLAEALAARRNDLTPPA 220
>RSNL2_MOUSE (Q8CI96) Restin-like protein 2| Length = 704 Score = 29.6 bits (65), Expect = 3.4 Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 5/83 (6%) Frame = +3 Query: 192 DKG---SAAMANEIKADLEGSDVAAKVEAMKRAVMLLLNGETLPTLFITVVRYVLPSEDH 362 DKG + + + + LE +D AA + +K+ +LL+ LP T + VLP+ DH Sbjct: 218 DKGQIPAEVVPDPVDMPLEMADAAAIAKEIKQ---MLLDAVPLPC---TSAKAVLPNSDH 271 Query: 363 TIQKLLL--LYLEIIDKRDAAGR 425 T + +L L L++ D+ AG+ Sbjct: 272 TTSRAMLTSLGLKLGDRVVIAGQ 294
>MECP2_MACFA (Q95LG8) Methyl-CpG-binding protein 2 (MeCP-2 protein) (MeCP2)| Length = 486 Score = 29.6 bits (65), Expect = 3.4 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +1 Query: 34 APVNHSPPLPAPRSRPTSAADPTT 105 APV PPLP P P S+ DPT+ Sbjct: 378 APVPLLPPLPPPPPEPESSEDPTS 401
>MECP2_HUMAN (P51608) Methyl-CpG-binding protein 2 (MeCP-2 protein) (MeCP2)| Length = 486 Score = 29.6 bits (65), Expect = 3.4 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +1 Query: 34 APVNHSPPLPAPRSRPTSAADPTT 105 APV PPLP P P S+ DPT+ Sbjct: 378 APVPLLPPLPPPPPEPESSEDPTS 401
>SAHH3_HUMAN (Q96HN2) Putative adenosylhomocysteinase 3 (EC 3.3.1.1)| (S-adenosyl-L-homocysteine hydrolase 3) (AdoHcyase 3) Length = 611 Score = 29.6 bits (65), Expect = 3.4 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = +1 Query: 34 APVNHSPPLPAPRSRPTSAADPTT-NTPHAVALRR 135 AP PP+P P S P +A P P A A++R Sbjct: 54 APAAERPPVPGPGSGPAAALSPAAGKVPQASAMKR 88
>MYCB2_MOUSE (Q7TPH6) Probable ubiquitin ligase protein MYCBP2 (EC 6.3.2.-) (Myc| binding protein 2) (Protein associated with Myc) (Pam/highwire/rpm-1 protein) Length = 4711 Score = 29.6 bits (65), Expect = 3.4 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +1 Query: 55 PLPAPRSRPTSAADPTTNTPHAVALRRGCTA 147 PLP PRS P+ A+ P +++P L + TA Sbjct: 2860 PLPTPRSSPSGASSPRSSSPQDKNLPQKSTA 2890
>ZFP28_HUMAN (Q8NHY6) Zinc finger protein 28 homolog (Zfp-28) (Kruppel-like zinc| finger factor X6) Length = 868 Score = 29.3 bits (64), Expect = 4.4 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%) Frame = +1 Query: 34 APVNHSPPLP---APRSRPTSAADPTTNTPHAVAL 129 A V PLP APR++P + PT TP +AL Sbjct: 7 ASVREPTPLPGRGAPRTKPRAGRGPTVGTPATLAL 41
>IRS1A_XENLA (Q91615) Insulin receptor substrate 1-A (IRS1-A) (xIRS-1-A)| (XIRS-L) Length = 885 Score = 29.3 bits (64), Expect = 4.4 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = +1 Query: 19 ASRLFAPVNHSPPLPAPRSRPTSAADPTTNTPHAVALRRGCTAD 150 +SRL P+NHS +P P +R + +A + + G T+D Sbjct: 155 SSRLHPPLNHSRSIPMPATRCSPSATSPVSLSSSSTSGHGSTSD 198
>IRS1_HUMAN (P35568) Insulin receptor substrate 1 (IRS-1)| Length = 1242 Score = 29.3 bits (64), Expect = 4.4 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = +1 Query: 19 ASRLFAPVNHSPPLPAPRSRPTSAADPTTNTPHAVALRRGCTAD 150 ++RL P+NHS +P P SR + +A + + G T+D Sbjct: 362 SARLHPPLNHSRSIPMPASRCSPSATSPVSLSSSSTSGHGSTSD 405
>IRS1B_XENLA (P84770) Insulin receptor substrate 1-B (IRS1-B) (xIRS-1-B)| (XIRS-L') Length = 1088 Score = 29.3 bits (64), Expect = 4.4 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = +1 Query: 19 ASRLFAPVNHSPPLPAPRSRPTSAADPTTNTPHAVALRRGCTAD 150 +SRL P+NHS +P P +R + +A + + G T+D Sbjct: 358 SSRLHPPLNHSRSIPMPATRCSPSATSPVSLSSSSTSGHGSTSD 401
>IRS1_CERAE (Q28224) Insulin receptor substrate 1 (IRS-1)| Length = 1251 Score = 29.3 bits (64), Expect = 4.4 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = +1 Query: 19 ASRLFAPVNHSPPLPAPRSRPTSAADPTTNTPHAVALRRGCTAD 150 ++RL P+NHS +P P SR + +A + + G T+D Sbjct: 362 SARLHPPLNHSRSIPMPASRCSPSATSPVSLSSSSTSGHGSTSD 405
>YNP2_YEAST (P53901) Hypothetical 46.2 kDa protein in YCK2-RPC8 intergenic| region Length = 409 Score = 29.3 bits (64), Expect = 4.4 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = +3 Query: 45 PLPPSSGSQISTHLRRRSNHQYPTRRRPPARV 140 PLP +S S ++ R N PTR+RPP R+ Sbjct: 381 PLPTTSNSNFNS----RKNSMSPTRKRPPPRL 408
>GSCR1_HUMAN (Q9NZM4) Glioma tumor suppressor candidate region gene 1 protein| Length = 1509 Score = 28.9 bits (63), Expect = 5.8 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = +1 Query: 34 APVNHSPPLPAPRSRPTSAADPTTNTPHAVALRRGCTADPAP 159 AP S PLP +P + P TP A A + T P+P Sbjct: 576 APPAVSTPLPLGLQQPQAQQPPQAPTPQAAAPPQATTPQPSP 617
>DNAE2_SYMTH (Q67N73) Error-prone DNA polymerase (EC 2.7.7.7)| Length = 1085 Score = 28.9 bits (63), Expect = 5.8 Identities = 19/58 (32%), Positives = 30/58 (51%) Frame = -1 Query: 224 DLIRHGGGALVEVD*QRARLVHGAGSAVHPRRRATACGVLVVGSAAEVGRDLGAGRGG 51 DL+R GGA+ + A ++ GA +H RRA V + A + ++ GAG+ G Sbjct: 868 DLVRRTGGAVPRGPLE-ALVLAGAFDRLHSNRRAALWQVAHLLEAERIRQERGAGQAG 924
>KLF13_MOUSE (Q9JJZ6) Krueppel-like factor 13 (Transcription factor BTEB3)| (Basic transcription element-binding protein 3) (BTE-binding protein 3) (RANTES factor of late activated T-lymphocytes 1) (RFLAT-1) (Erythroid transcription factor FKLF-2) Length = 289 Score = 28.9 bits (63), Expect = 5.8 Identities = 16/48 (33%), Positives = 20/48 (41%) Frame = +1 Query: 16 LASRLFAPVNHSPPLPAPRSRPTSAADPTTNTPHAVALRRGCTADPAP 159 + +R+ A +N P PAP R AA TP C PAP Sbjct: 62 VVARILADLNQQAPAPAPAERREGAAARKARTP--------CRLPPAP 101
>THIC_RHILO (Q98AZ3) Thiamine biosynthesis protein thiC| Length = 619 Score = 28.9 bits (63), Expect = 5.8 Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 11/87 (12%) Frame = +3 Query: 21 ISPLRSCQPLPPS-----SG---SQISTHLRRRSNHQYPTRRRPPARVHGRSGAMDKPCT 176 ++P S PLP S SG QI +R S H PT PP V+ SG P T Sbjct: 12 LTPAVSTGPLPASRKIHKSGVLHPQIRVPMREISVH--PTAGEPPVIVYDPSGPYTDP-T 68 Query: 177 LLVHFDKGSAAMANE---IKADLEGSD 248 + +KG A + +E + D+E D Sbjct: 69 VETSIEKGLARLRHEWITARGDVEAYD 95
>KC1G2_RAT (Q62762) Casein kinase I isoform gamma-2 (EC 2.7.11.1) (CKI-gamma| 2) Length = 415 Score = 28.9 bits (63), Expect = 5.8 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = -1 Query: 134 RRRATACGVLVVGSAAEVGRDLGAGRGGEWLTG 36 R T+ GVL+VG VG+ +G G GE G Sbjct: 31 RNSGTSSGVLMVGPNFRVGKKIGCGNFGELRLG 63
>KC1G1_RAT (Q62761) Casein kinase I isoform gamma-1 (EC 2.7.11.1) (CKI-gamma| 1) Length = 390 Score = 28.9 bits (63), Expect = 5.8 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -1 Query: 137 PRRRATACGVLVVGSAAEVGRDLGAGRGGEWLTG 36 P +T+ GVL+VG VG+ +G G GE G Sbjct: 28 PSGTSTSSGVLMVGPNFRVGKKIGCGNFGELRLG 61
>MYCB2_HUMAN (O75592) Probable ubiquitin ligase protein MYCBP2 (EC 6.3.2.-) (Myc| binding protein 2) (Protein associated with Myc) (Pam/highwire/rpm-1 protein) Length = 4641 Score = 28.9 bits (63), Expect = 5.8 Identities = 17/42 (40%), Positives = 25/42 (59%) Frame = +1 Query: 22 SRLFAPVNHSPPLPAPRSRPTSAADPTTNTPHAVALRRGCTA 147 SRL +P + LPA RS P+ A+ P +++PH L + TA Sbjct: 2779 SRLSSPKPKT--LPANRSSPSGASSPRSSSPHDKNLPQKSTA 2818
>CRX_HUMAN (O43186) Cone-rod homeobox protein| Length = 299 Score = 28.5 bits (62), Expect = 7.6 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 6/41 (14%) Frame = +1 Query: 43 NHSPPLPAPRSRPTSAA------DPTTNTPHAVALRRGCTA 147 ++SPPLP P PT+A P + +P A R G A Sbjct: 141 SYSPPLPGPSGSPTTAVATVSIWSPASESPLPEAQRAGLVA 181
>CRX_BOVIN (Q9XSK0) Cone-rod homeobox protein| Length = 299 Score = 28.5 bits (62), Expect = 7.6 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 6/41 (14%) Frame = +1 Query: 43 NHSPPLPAPRSRPTSAA------DPTTNTPHAVALRRGCTA 147 ++SPPLP P PT+A P + +P A R G A Sbjct: 141 SYSPPLPGPSGSPTTAVATVSIWSPASESPLPEAQRAGLVA 181
>ANPRC_MOUSE (P70180) Atrial natriuretic peptide clearance receptor precursor| (ANP-C) (ANPRC) (NPR-C) (Atrial natriuretic peptide C-type receptor) (EF-2) Length = 536 Score = 28.5 bits (62), Expect = 7.6 Identities = 11/44 (25%), Positives = 26/44 (59%) Frame = +3 Query: 231 DLEGSDVAAKVEAMKRAVMLLLNGETLPTLFITVVRYVLPSEDH 362 DL+ D+ ++ +R V++ +G+T+ + + V R+ + S D+ Sbjct: 236 DLDLDDIVRYIQGSERVVIMCASGDTIRRIMLAVHRHGMTSGDY 279
>ANPRC_RAT (P41740) Atrial natriuretic peptide clearance receptor precursor| (ANP-C) (ANPRC) (NPR-C) (Atrial natriuretic peptide C-type receptor) Length = 535 Score = 28.5 bits (62), Expect = 7.6 Identities = 11/44 (25%), Positives = 26/44 (59%) Frame = +3 Query: 231 DLEGSDVAAKVEAMKRAVMLLLNGETLPTLFITVVRYVLPSEDH 362 DL+ D+ ++ +R V++ +G+T+ + + V R+ + S D+ Sbjct: 236 DLDLDDIVRYIQGSERVVIMCASGDTIRRIMLAVHRHGMTSGDY 279
>KC1G2_MOUSE (Q8BVP5) Casein kinase I isoform gamma-2 (EC 2.7.11.1) (CKI-gamma| 2) Length = 415 Score = 28.5 bits (62), Expect = 7.6 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = -1 Query: 134 RRRATACGVLVVGSAAEVGRDLGAGRGGEWLTG 36 R T+ GVL+VG VG+ +G G GE G Sbjct: 31 RSSGTSSGVLMVGPNFRVGKKIGCGNFGELRLG 63
>ATN1_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)| Length = 1185 Score = 28.5 bits (62), Expect = 7.6 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 6/43 (13%) Frame = +3 Query: 45 PLPPSSGSQ------ISTHLRRRSNHQYPTRRRPPARVHGRSG 155 P PPS+G+Q +STH Q +++ + HG SG Sbjct: 461 PFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQHHGNSG 503
>POTE8_HUMAN (Q6S8J7) Prostate, ovary, testis expressed protein on chromosome 8| Length = 498 Score = 28.5 bits (62), Expect = 7.6 Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 3/91 (3%) Frame = +3 Query: 159 MDKPCTLLVHFDKGSAAMANEIKADLEGSDVAAKVEAMKRAVMLLLNGE--TLPTLF-IT 329 +D+ C L V K A+ ++ + + A+MLL +G LP ++ T Sbjct: 119 LDRQCQLHVFDSKKRTALIKAVQCQED-----------ECALMLLQHGTDPNLPDMYGNT 167 Query: 330 VVRYVLPSEDHTIQKLLLLYLEIIDKRDAAG 422 + Y + +ED + K LLLY I+ ++ G Sbjct: 168 ALHYAVYNEDKLMAKTLLLYGADIESKNKGG 198
>MYCLB_XENLA (P35805) L-myc B protein (L-myc 2 protein)| Length = 344 Score = 28.1 bits (61), Expect = 9.9 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 4/36 (11%) Frame = +3 Query: 30 LRSCQPLPP----SSGSQISTHLRRRSNHQYPTRRR 125 L+ C P P +SGS S L +R NH Y R+R Sbjct: 238 LQPCSPQMPDSPLASGSSDSEDLAKRKNHNYLERKR 273
>RCOR2_BRARE (Q6P116) REST corepressor 2| Length = 536 Score = 28.1 bits (61), Expect = 9.9 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = +3 Query: 18 GISPLRSCQPLPPSSGSQISTHLRRRSNHQYPTRRRPP 131 GISP S PLP S GS H +S+ P +PP Sbjct: 420 GISPPHSDSPLPSSEGSASGNHSSAQSS---PPLTQPP 454
>NU2C_PROMM (Q7V626) NAD(P)H-quinone oxidoreductase chain 2 (EC 1.6.5.-)| (NAD(P)H dehydrogenase I, chain 2) (NDH-1, chain 2) Length = 523 Score = 28.1 bits (61), Expect = 9.9 Identities = 16/46 (34%), Positives = 23/46 (50%) Frame = -2 Query: 259 LAATSLPSRSALISFAMAAEPLSKWTSSVHGLSMAPDLPCTRAGGR 122 LAA SL A ++F +AA P +WT V+ S P + G + Sbjct: 222 LAALSLVFVLATVAFKIAAVPFHQWTPDVYEGSPTPVVAFLSVGSK 267
>KC1G3_RAT (Q62763) Casein kinase I isoform gamma-3 (EC 2.7.11.1) (CKI-gamma| 3) Length = 448 Score = 28.1 bits (61), Expect = 9.9 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Frame = -1 Query: 170 RLVHGAGSAVHPRRR--ATACGVLVVGSAAEVGRDLGAGRGGEWLTG 36 R+ +G + H R +++ GVL+VG VG+ +G G GE G Sbjct: 14 RMARPSGRSGHSTRGTGSSSSGVLMVGPNFRVGKKIGCGNFGELRLG 60
>FA12_HUMAN (P00748) Coagulation factor XII precursor (EC 3.4.21.38) (Hageman| factor) (HAF) [Contains: Coagulation factor XIIa heavy chain; Beta-factor XIIa part 1; Beta-factor XIIa part 2; Coagulation factor XIIa light chain] Length = 615 Score = 28.1 bits (61), Expect = 9.9 Identities = 13/40 (32%), Positives = 23/40 (57%) Frame = +1 Query: 16 LASRLFAPVNHSPPLPAPRSRPTSAADPTTNTPHAVALRR 135 ++ RL P+ + P P P+ +PT+ P + TP A+ +R Sbjct: 307 VSPRLHVPLMPAQPAP-PKPQPTTRTPPQSQTPGALPAKR 345
>S27A3_HUMAN (Q5K4L6) Long-chain fatty acid transport protein 3 (EC 6.2.1.-)| (Fatty acid transport protein 3) (FATP-3) (Very long-chain acyl-CoA synthetase homolog 3) (VLCS-3) (Solute carrier family 27 member 3) Length = 683 Score = 28.1 bits (61), Expect = 9.9 Identities = 16/36 (44%), Positives = 16/36 (44%) Frame = -1 Query: 158 GAGSAVHPRRRATACGVLVVGSAAEVGRDLGAGRGG 51 G GSA R A G GS AE GA RGG Sbjct: 123 GEGSAGEGERAAPGAGDAAAGSGAEFAGGDGAARGG 158
>RL1_HHV11 (O12396) Neurovirulence factor RL1 (Neurovirulence factor ICP34.5)| Length = 248 Score = 28.1 bits (61), Expect = 9.9 Identities = 16/35 (45%), Positives = 19/35 (54%) Frame = +1 Query: 52 PPLPAPRSRPTSAADPTTNTPHAVALRRGCTADPA 156 PP PAP +RPT+AA P V G ADP+ Sbjct: 87 PPEPAPEARPTAAAPRPRPPPPGVG--PGGGADPS 119
>VRP1_YEAST (P37370) Verprolin| Length = 817 Score = 28.1 bits (61), Expect = 9.9 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = +1 Query: 37 PVNHSPPLPAPRSRPTSAADPTTNTPHAVALRRGCTADPAP 159 P +H+PPLP PT A P + P+ + + T+ PAP Sbjct: 318 PTSHAPPLP-----PT--APPPPSLPNVTSAPKKATSAPAP 351
>DRD2_RAT (P61169) D(2) dopamine receptor (Dopamine D2 receptor)| Length = 444 Score = 28.1 bits (61), Expect = 9.9 Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 5/69 (7%) Frame = -2 Query: 334 TTVMKSVGRVSPLRRSMTARFMASTL-----AATSLPSRSALISFAMAAEPLSKWTSSVH 170 T +MKS G RR M A A L ++TS P R+ + L+ S H Sbjct: 254 TVIMKSNGSFPVNRRRMDAARRAQELEMEMLSSTSPPERTRYSPIPPSHHQLTLPDPSHH 313 Query: 169 GLSMAPDLP 143 GL PD P Sbjct: 314 GLHSNPDSP 322
>DRD2_MOUSE (P61168) D(2) dopamine receptor (Dopamine D2 receptor)| Length = 444 Score = 28.1 bits (61), Expect = 9.9 Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 5/69 (7%) Frame = -2 Query: 334 TTVMKSVGRVSPLRRSMTARFMASTL-----AATSLPSRSALISFAMAAEPLSKWTSSVH 170 T +MKS G RR M A A L ++TS P R+ + L+ S H Sbjct: 254 TVIMKSNGSFPVNRRRMDAARRAQELEMEMLSSTSPPERTRYSPIPPSHHQLTLPDPSHH 313 Query: 169 GLSMAPDLP 143 GL PD P Sbjct: 314 GLHSNPDSP 322
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 28.1 bits (61), Expect = 9.9 Identities = 14/35 (40%), Positives = 15/35 (42%) Frame = +3 Query: 24 SPLRSCQPLPPSSGSQISTHLRRRSNHQYPTRRRP 128 SP P PP + S H S HQYP RP Sbjct: 376 SPYPQRYPTPPGLPAGGSNHRTAYSTHQYPEPNRP 410 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,906,773 Number of Sequences: 219361 Number of extensions: 870666 Number of successful extensions: 4912 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 4178 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4863 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
