ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl31g04 |
|---|---|
| Clone Library Name | barley_pub |
>AP1B1_MOUSE (O35643) AP-1 complex subunit beta-1 (Adapter-related protein| complex 1 beta-1 subunit) (Beta-adaptin 1) (Adaptor protein complex AP-1 beta-1 subunit) (Golgi adaptor HA1/AP1 adaptin beta subunit) (Clathrin assembly protein complex 1 beta larg Length = 943 Score = 161 bits (407), Expect = 9e-40 Identities = 79/96 (82%), Positives = 90/96 (93%) Frame = +3 Query: 165 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 344 DSKYF+TTKKGEI ELK ELNS K+K+K+AVKKVIA+MTVGKDVS+LF DVVNCMQT+N Sbjct: 3 DSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQTDN 62 Query: 345 LELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDP 452 LELKKLVYLYL+NYAKSQPD+AI+AVNTFVKD +DP Sbjct: 63 LELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDP 98
>AP1B1_RAT (P52303) AP-1 complex subunit beta-1 (Adapter-related protein| complex 1 beta-1 subunit) (Beta-adaptin 1) (Adaptor protein complex AP-1 beta-1 subunit) (Golgi adaptor HA1/AP1 adaptin beta subunit) (Clathrin assembly protein complex 1 beta large Length = 949 Score = 161 bits (407), Expect = 9e-40 Identities = 79/96 (82%), Positives = 90/96 (93%) Frame = +3 Query: 165 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 344 DSKYF+TTKKGEI ELK ELNS K+K+K+AVKKVIA+MTVGKDVS+LF DVVNCMQT+N Sbjct: 3 DSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQTDN 62 Query: 345 LELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDP 452 LELKKLVYLYL+NYAKSQPD+AI+AVNTFVKD +DP Sbjct: 63 LELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDP 98
>AP1B1_HUMAN (Q10567) AP-1 complex subunit beta-1 (Adapter-related protein| complex 1 beta-1 subunit) (Beta-adaptin 1) (Adaptor protein complex AP-1 beta-1 subunit) (Golgi adaptor HA1/AP1 adaptin beta subunit) (Clathrin assembly protein complex 1 beta larg Length = 949 Score = 161 bits (407), Expect = 9e-40 Identities = 79/96 (82%), Positives = 90/96 (93%) Frame = +3 Query: 165 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 344 DSKYF+TTKKGEI ELK ELNS K+K+K+AVKKVIA+MTVGKDVS+LF DVVNCMQT+N Sbjct: 3 DSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQTDN 62 Query: 345 LELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDP 452 LELKKLVYLYL+NYAKSQPD+AI+AVNTFVKD +DP Sbjct: 63 LELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDP 98
>AP2B1_RAT (P62944) AP-2 complex subunit beta-1 (Adapter-related protein| complex 2 beta-1 subunit) (Beta-adaptin) (Plasma membrane adaptor HA2/AP2 adaptin beta subunit) (Clathrin assembly protein complex 2 beta large chain) (AP105B) Length = 937 Score = 160 bits (406), Expect = 1e-39 Identities = 79/96 (82%), Positives = 90/96 (93%) Frame = +3 Query: 165 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 344 DSKYF+T KKGEI ELK ELN++ K+KRK+AVKKVIAAMTVGKDVSSLF DVVNCMQT+N Sbjct: 3 DSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQTDN 62 Query: 345 LELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDP 452 LELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DP Sbjct: 63 LELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDP 98
>AP2B1_MOUSE (Q9DBG3) AP-2 complex subunit beta-1 (Adapter-related protein| complex 2 beta-1 subunit) (Beta-adaptin) (Plasma membrane adaptor HA2/AP2 adaptin beta subunit) (Clathrin assembly protein complex 2 beta large chain) (AP105B) Length = 937 Score = 160 bits (406), Expect = 1e-39 Identities = 79/96 (82%), Positives = 90/96 (93%) Frame = +3 Query: 165 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 344 DSKYF+T KKGEI ELK ELN++ K+KRK+AVKKVIAAMTVGKDVSSLF DVVNCMQT+N Sbjct: 3 DSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQTDN 62 Query: 345 LELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDP 452 LELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DP Sbjct: 63 LELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDP 98
>AP2B1_HUMAN (P63010) AP-2 complex subunit beta-1 (Adapter-related protein| complex 2 beta-1 subunit) (Beta-adaptin) (Plasma membrane adaptor HA2/AP2 adaptin beta subunit) (Clathrin assembly protein complex 2 beta large chain) (AP105B) Length = 937 Score = 160 bits (406), Expect = 1e-39 Identities = 79/96 (82%), Positives = 90/96 (93%) Frame = +3 Query: 165 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 344 DSKYF+T KKGEI ELK ELN++ K+KRK+AVKKVIAAMTVGKDVSSLF DVVNCMQT+N Sbjct: 3 DSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQTDN 62 Query: 345 LELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDP 452 LELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DP Sbjct: 63 LELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDP 98
>AP2B1_BOVIN (P63009) AP-2 complex subunit beta-1 (Adapter-related protein| complex 2 beta-1 subunit) (Beta-adaptin) (Plasma membrane adaptor HA2/AP2 adaptin beta subunit) (Clathrin assembly protein complex 2 beta large chain) (AP105B) (Fragment) Length = 236 Score = 119 bits (298), Expect = 4e-27 Identities = 58/66 (87%), Positives = 64/66 (96%) Frame = +3 Query: 255 AVKKVIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFV 434 AVKKVIAAMTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FV Sbjct: 1 AVKKVIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFV 60 Query: 435 KDSQDP 452 KD +DP Sbjct: 61 KDCEDP 66
>AP1B1_SCHPO (O43079) AP-1 complex subunit beta-1 (Beta(1)-adaptin) (Clathrin| assembly protein large beta-1 chain) (Clathrin assembly protein complex 1 beta-1 large chain) Length = 683 Score = 115 bits (289), Expect = 5e-26 Identities = 61/94 (64%), Positives = 72/94 (76%) Frame = +3 Query: 168 SKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENL 347 S F KK E EL++ L SQY +R DAVK+ IAAMTVGKDVSSLF DV+ + T ++ Sbjct: 8 SSRFKAFKKSETSELQKGLVSQYAYERIDAVKRTIAAMTVGKDVSSLFPDVLKNLATRDI 67 Query: 348 ELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQD 449 LKKLVYLYLINYAK+ PDL ILAVNTFVKDS++ Sbjct: 68 TLKKLVYLYLINYAKTHPDLCILAVNTFVKDSEE 101
>AP1B1_YEAST (P36000) AP-1 complex subunit beta-1 (Beta(1)-adaptin) (Clathrin| assembly protein large beta-1 chain) (Clathrin assembly protein complex 1 beta-1 large chain) Length = 726 Score = 108 bits (269), Expect = 9e-24 Identities = 53/87 (60%), Positives = 68/87 (78%) Frame = +3 Query: 192 KGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVYL 371 KGE+ EL+ L SQY RKDA+KK I MT+GKDVSSLF DV+ + T ++E KKLVYL Sbjct: 25 KGELSELRTGLVSQYPQTRKDAIKKTIQQMTLGKDVSSLFPDVLKNIATIDVEQKKLVYL 84 Query: 372 YLINYAKSQPDLAILAVNTFVKDSQDP 452 Y++NYA++ P+L ILAVNTF+ D+QDP Sbjct: 85 YVMNYAETHPELCILAVNTFITDAQDP 111
>AP3B1_CANFA (Q7YRF1) AP-3 complex subunit beta-1 (Adapter-related protein| complex 3 beta-1 subunit) (Beta3A-adaptin) (Adaptor protein complex AP-3 beta-1 subunit) (Clathrin assembly protein complex 3 beta-1 large chain) Length = 1091 Score = 82.0 bits (201), Expect = 7e-16 Identities = 46/118 (38%), Positives = 72/118 (61%), Gaps = 1/118 (0%) Frame = +3 Query: 102 AGGGDRCVFGR*ARRG-DMSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAA 278 AGGG+ G+ A SG + S KK E +LK+ L S + DA+K+++ Sbjct: 12 AGGGEATELGQEATSTVSPSGAFGLFSSDLKKNE--DLKQMLESNKDSAKLDAMKRIVGM 69 Query: 279 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDP 452 + GK+ S LF VV + ++N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DP Sbjct: 70 IAKGKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDP 127
>AP3B1_MOUSE (Q9Z1T1) AP-3 complex subunit beta-1 (Adapter-related protein| complex 3 beta-1 subunit) (Beta3A-adaptin) (Adaptor protein complex AP-3 beta-1 subunit) (Clathrin assembly protein complex 3 beta-1 large chain) Length = 1105 Score = 80.9 bits (198), Expect = 2e-15 Identities = 45/118 (38%), Positives = 72/118 (61%), Gaps = 1/118 (0%) Frame = +3 Query: 102 AGGGDRCVFGR*ARRG-DMSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAA 278 +GGG+ G+ A SG + S KK E +LK+ L S + DA+K+++ Sbjct: 12 SGGGEAAELGQEATSTISPSGAFGLFSSDWKKNE--DLKQMLESNKDSAKLDAMKRIVGM 69 Query: 279 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDP 452 + GK+ S LF VV + ++N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DP Sbjct: 70 IAKGKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDP 127
>AP3B1_HUMAN (O00203) AP-3 complex subunit beta-1 (Adapter-related protein| complex 3 beta-1 subunit) (Beta3A-adaptin) (Adaptor protein complex AP-3 beta-1 subunit) (Clathrin assembly protein complex 3 beta-1 large chain) Length = 1094 Score = 80.9 bits (198), Expect = 2e-15 Identities = 45/118 (38%), Positives = 72/118 (61%), Gaps = 1/118 (0%) Frame = +3 Query: 102 AGGGDRCVFGR*ARRG-DMSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAA 278 +GGG+ G+ A SG + S KK E +LK+ L S + DA+K+++ Sbjct: 12 SGGGEATELGQEATSTISPSGAFGLFSSDLKKNE--DLKQMLESNKDSAKLDAMKRIVGM 69 Query: 279 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDP 452 + GK+ S LF VV + ++N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DP Sbjct: 70 IAKGKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDP 127
>AP3B2_MOUSE (Q9JME5) AP-3 complex subunit beta-2 (Adapter-related protein| complex 3 beta-2 subunit) (Beta3B-adaptin) (Adaptor protein complex AP-3 beta-2 subunit) (Clathrin assembly protein complex 3 beta-2 large chain) Length = 1082 Score = 74.7 bits (182), Expect = 1e-13 Identities = 40/101 (39%), Positives = 65/101 (64%), Gaps = 3/101 (2%) Frame = +3 Query: 159 GHDSK---YFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNC 329 GHD FS+ K +LKE L++ + +A+K+++A + GK+ S LF VV Sbjct: 23 GHDPASGGIFSSDYKRH-DDLKEMLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKN 81 Query: 330 MQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDP 452 + +N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DP Sbjct: 82 VACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDP 122
>AP3B2_HUMAN (Q13367) AP-3 complex subunit beta-2 (Adapter-related protein| complex 3 beta-2 subunit) (Beta3B-adaptin) (Adaptor protein complex AP-3 beta-2 subunit) (AP-3 complex beta-2 subunit) (Clathrin assembly protein complex 3 beta-2 large chain) (Neu Length = 1082 Score = 74.7 bits (182), Expect = 1e-13 Identities = 40/101 (39%), Positives = 65/101 (64%), Gaps = 3/101 (2%) Frame = +3 Query: 159 GHDSK---YFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNC 329 GHD FS+ K +LKE L++ + +A+K+++A + GK+ S LF VV Sbjct: 23 GHDPASGGIFSSDYKRH-DDLKEMLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKN 81 Query: 330 MQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDP 452 + +N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DP Sbjct: 82 VACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDP 122
>AP4B1_HUMAN (Q9Y6B7) AP-4 complex subunit beta-1 (Adapter-related protein| complex 4 beta 1 subunit) (Beta subunit of AP-4) (AP-4 adapter complex beta subunit) Length = 739 Score = 68.2 bits (165), Expect = 1e-11 Identities = 35/88 (39%), Positives = 56/88 (63%), Gaps = 4/88 (4%) Frame = +3 Query: 201 IPELKEELNSQY----KDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVY 368 + ELK+ L + + + + ++ +++VI MT G D+S +F ++V T ++ KKLVY Sbjct: 10 VKELKKALCNPHIQADRLRYRNVIQRVIRYMTQGLDMSGVFMEMVKASATVDIVQKKLVY 69 Query: 369 LYLINYAKSQPDLAILAVNTFVKDSQDP 452 LY+ YA +PDLA+LA+NT KD DP Sbjct: 70 LYMCTYAPLKPDLALLAINTLCKDCSDP 97
>AP4B1_MOUSE (Q9WV76) AP-4 complex subunit beta-1 (Adapter-related protein| complex 4 beta-1 subunit) (Beta subunit of AP-4) (AP-4 adapter complex beta subunit) Length = 739 Score = 67.0 bits (162), Expect = 2e-11 Identities = 35/88 (39%), Positives = 56/88 (63%), Gaps = 4/88 (4%) Frame = +3 Query: 201 IPELKEELNSQY----KDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVY 368 + ELK+ L + + + + ++ +++VI MT G D+S +F ++V T ++ KKLVY Sbjct: 10 VKELKKALCNPHIQADRLRYRNVIQRVIRHMTQGLDMSDVFMEMVKASATVDIVQKKLVY 69 Query: 369 LYLINYAKSQPDLAILAVNTFVKDSQDP 452 LY+ YA +PDLA+LA+NT KD DP Sbjct: 70 LYMGTYAPLKPDLALLAINTLCKDCSDP 97
>AP2B_SCHPO (O43005) AP-2 complex subunit beta (Beta-adaptin) (Clathrin| assembly protein large beta chain) (Clathrin assembly protein complex 2 beta large chain) Length = 677 Score = 66.6 bits (161), Expect = 3e-11 Identities = 37/91 (40%), Positives = 53/91 (58%) Frame = +3 Query: 168 SKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENL 347 S +FS+T + + + +KR A+KK IA ++ G D+SSLF V++ M++ NL Sbjct: 5 SSHFSSTAADLLAVFSSDNKDKSANKRISALKKAIAGISYGYDMSSLFPSVISSMESNNL 64 Query: 348 ELKKLVYLYLINYAKSQPDLAILAVNTFVKD 440 ELKKL YLYL YA +P A AV + D Sbjct: 65 ELKKLCYLYLKIYASVKPTEAKRAVKLILND 95
>AP3B_SCHPO (O13939) AP-3 complex subunit beta (Beta-adaptin) (Adapter-related| protein complex 3 beta subunit) (Clathrin assembly protein large beta chain) (Clathrin assembly protein complex 3 beta large chain) Length = 745 Score = 63.5 bits (153), Expect = 3e-10 Identities = 32/81 (39%), Positives = 52/81 (64%) Frame = +3 Query: 207 ELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINY 386 +L LNS + +A+ ++A M G+++S F DVV + +EN E+++LV++YL+ Y Sbjct: 37 DLLRLLNSNSDAGKLEAINFILAQMMHGENMSLYFPDVVKLVASENPEIRRLVHIYLLQY 96 Query: 387 AKSQPDLAILAVNTFVKDSQD 449 A+ PDLA+L+VNT K D Sbjct: 97 AEFNPDLALLSVNTVQKTLYD 117
>AP3B_ASHGO (Q759E2) AP-3 complex subunit beta (Beta-adaptin) (Adapter-related| protein complex 3 beta subunit) (Clathrin assembly protein large beta chain) (Clathrin assembly protein complex 3 beta large chain) Length = 781 Score = 58.5 bits (140), Expect = 9e-09 Identities = 28/98 (28%), Positives = 62/98 (63%), Gaps = 3/98 (3%) Frame = +3 Query: 165 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGK---DVSSLFTDVVNCMQ 335 +S YF +K + L LNS+Y + +D +K+V++ M G ++ + F D+V + Sbjct: 32 ESSYFHYSKSIDSESLPGLLNSRYTREVRDGMKRVMSLMGSGDSSIELETHFADIVKNIG 91 Query: 336 TENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQD 449 +++++++++V +YL+ YA++ P+LA+L++N+ + D Sbjct: 92 SDDVKVRRMVSVYLLRYAETNPNLALLSINSIQRSLSD 129
>AP3B_YEAST (P46682) AP-3 complex subunit beta (Beta-adaptin) (Adapter-related| protein complex 3 beta subunit) (Clathrin assembly protein large beta chain) (Clathrin assembly protein complex 3 beta large chain) Length = 809 Score = 55.8 bits (133), Expect = 6e-08 Identities = 30/98 (30%), Positives = 57/98 (58%), Gaps = 3/98 (3%) Frame = +3 Query: 165 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKD---VSSLFTDVVNCMQ 335 +S Y ++ +L LNS+ + +DA+K++I+ M D V F DVV + Sbjct: 32 ESSYTYYSQNINPQQLVTLLNSRNSREVRDAMKRIISIMASDDDSIDVQLYFADVVKNIT 91 Query: 336 TENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQD 449 T + ++K+L++LYL+ +A++ P+L +L++N+ K D Sbjct: 92 TNDTKVKRLIHLYLLRFAENDPNLTLLSINSLQKSLSD 129
>AP3D_DROME (P54362) AP-3 complex subunit delta (Delta-adaptin) (Garnet| protein) (Delta adaptin subunit of AP-3) Length = 1034 Score = 36.6 bits (83), Expect = 0.035 Identities = 24/93 (25%), Positives = 42/93 (45%) Frame = +3 Query: 162 HDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTE 341 +++KY ST I E+K+EL + +AV K+ +G D+S +++ M + Sbjct: 32 NEAKYISTC----IEEIKQELRQDNISVKCNAVAKLTYIQMLGYDISWAGFNIIEVMSSS 87 Query: 342 NLELKKLVYLYLINYAKSQPDLAILAVNTFVKD 440 K++ YL +L +L N KD Sbjct: 88 RFTCKRIGYLAASQCFHPDSELLMLTTNMIRKD 120
>COPB_SCHPO (Q9UUF7) Coatomer subunit beta (Beta-coat protein) (Beta-COP)| Length = 940 Score = 35.8 bits (81), Expect = 0.060 Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 6/90 (6%) Frame = +3 Query: 201 IPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVN-CMQTENLELKKLVYLY- 374 + LK L S+ + A+K ++ + G + S+ V+ M + N ELKKL+Y Y Sbjct: 17 VDALKTSLESKNDYVKISAMKTILRVVINGDSLPSILMHVIRFVMPSRNKELKKLLYYYW 76 Query: 375 ----LINYAKSQPDLAILAVNTFVKDSQDP 452 N + ILA N+F D Q P Sbjct: 77 EVCPKYNNDGTMKQEMILACNSFRNDLQHP 106
>AP3D1_HUMAN (O14617) AP-3 complex subunit delta-1 (Adapter-related protein| complex 3 delta-1 subunit) (Delta-adaptin 3) (AP-3 complex delta subunit) (Delta-adaptin) Length = 1153 Score = 35.4 bits (80), Expect = 0.078 Identities = 24/96 (25%), Positives = 40/96 (41%) Frame = +3 Query: 165 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 344 ++KY S I E+K+EL + +AV K+ +G D+S +++ M Sbjct: 32 EAKYISQC----IDEIKQELKQDNIAVKANAVCKLTYLQMLGYDISWAAFNIIEVMSASK 87 Query: 345 LELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDP 452 K++ YL D+ +L N KD P Sbjct: 88 FTFKRIGYLAASQSFHEGTDVIMLTTNQIRKDLSSP 123
>AP3D1_BOVIN (Q865S1) AP-3 complex subunit delta-1 (Adapter-related protein| complex 3 delta-1 subunit) (Delta-adaptin 3) (AP-3 complex delta subunit) (Delta-adaptin) Length = 1207 Score = 35.4 bits (80), Expect = 0.078 Identities = 24/96 (25%), Positives = 40/96 (41%) Frame = +3 Query: 165 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 344 ++KY S I E+K+EL + +AV K+ +G D+S +++ M Sbjct: 32 EAKYISQC----IDEIKQELKQDNIAVKANAVCKLTYLQMLGYDISWAAFNIIEVMSASK 87 Query: 345 LELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDP 452 K++ YL D+ +L N KD P Sbjct: 88 FTFKRIGYLAASQCFHEGTDVIMLTTNQIRKDLSSP 123
>AP3D1_MOUSE (O54774) AP-3 complex subunit delta-1 (Adapter-related protein| complex 3 delta-1 subunit) (Delta-adaptin 3) (AP-3 complex delta subunit) (Delta-adaptin) (mBLVR1) Length = 1199 Score = 35.0 bits (79), Expect = 0.10 Identities = 24/96 (25%), Positives = 40/96 (41%) Frame = +3 Query: 165 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 344 ++KY S I E+K+EL + +AV K+ +G D+S +++ M Sbjct: 32 EAKYISQC----IDEIKQELKQDNIAVKANAVCKLTYLQMLGYDISWAAFNIIEVMSASK 87 Query: 345 LELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDP 452 K++ YL D+ +L N KD P Sbjct: 88 FTFKRVGYLAASQCFHEGTDVIMLTTNQIRKDLSSP 123
>AP2B_YEAST (P27351) AP-2 complex subunit beta (Beta-adaptin) (Clathrin| assembly protein large beta chain) (Clathrin assembly protein complex 2 beta large chain) Length = 700 Score = 34.7 bits (78), Expect = 0.13 Identities = 28/99 (28%), Positives = 55/99 (55%), Gaps = 7/99 (7%) Frame = +3 Query: 165 DSKYFSTTKKGEI-PELKEELNSQYKD---KRKDAVKKVIAAMTVGK--DVSSLFTDVVN 326 D K F+ K EI +L+ ++K +RK+A++K+IA + +G ++S LF++++ Sbjct: 3 DQKVFARYKANEIVTDLQHFGVKKFKSNITRRKNALRKIIANLVLGNYGEMSVLFSELLK 62 Query: 327 CMQTE-NLELKKLVYLYLINYAKSQPDLAILAVNTFVKD 440 Q E +LE+K++ + Y+ +P A A+ + D Sbjct: 63 FWQIEDDLEVKRICHEYIRVIGALKPQQAREALPFIMDD 101
>AP4E1_HUMAN (Q9UPM8) AP-4 complex subunit epsilon-1 (Adapter-related protein| complex 4 epsilon-1 subunit) (Epsilon subunit of AP-4) (AP-4 adapter complex epsilon subunit) Length = 1137 Score = 33.9 bits (76), Expect = 0.23 Identities = 20/66 (30%), Positives = 33/66 (50%) Frame = +3 Query: 249 KDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNT 428 K+ + ++I +G D S + + Q NL K++ YL + + +L +L VNT Sbjct: 78 KECMVRLIYCEMLGYDASFGYIHAIKLAQQGNLLEKRVGYLAVSLFLHESHELLLLLVNT 137 Query: 429 FVKDSQ 446 VKD Q Sbjct: 138 VVKDLQ 143
>AP4E1_MOUSE (Q80V94) AP-4 complex subunit epsilon-1 (Adapter-related protein| complex 4 epsilon-1 subunit) (Epsilon subunit of AP-4) (AP-4 adapter complex epsilon subunit) Length = 1122 Score = 33.9 bits (76), Expect = 0.23 Identities = 20/66 (30%), Positives = 33/66 (50%) Frame = +3 Query: 249 KDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNT 428 K+ + ++I +G D S + + Q NL K++ YL + + +L +L VNT Sbjct: 77 KECMVRLIYCEMLGYDASFGYIHAIKLAQQGNLLEKRVGYLAVSLFLHESHELLLLLVNT 136 Query: 429 FVKDSQ 446 VKD Q Sbjct: 137 VVKDLQ 142
>COPB_YEAST (P41810) Coatomer subunit beta (Beta-coat protein) (Beta-COP)| Length = 973 Score = 32.7 bits (73), Expect = 0.51 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 6/88 (6%) Frame = +3 Query: 207 ELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVN-CMQTENLELKKLVYLYLIN 383 + ++ L +++ D +K ++ M G + L ++ M ++N ELKKL+Y Y Sbjct: 27 DFQKALEKGSDEQKIDTMKSILVTMLEGNPMPELLMHIIRFVMPSKNKELKKLLYFYWEI 86 Query: 384 YAKSQPD-----LAILAVNTFVKDSQDP 452 K D IL N D Q P Sbjct: 87 VPKLAEDGKLRHEMILVCNAIQHDLQHP 114
>ICP4_EHV1V (Q6S6U0) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 30.8 bits (68), Expect = 1.9 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = -1 Query: 151 SPRRAYLPNTHRSPPPAAEPGVRDGGLRYARGGGRPACLRDG 26 +PR + N ++P A PG GG R A G P R G Sbjct: 226 TPRPRHSQNAAKTPSAAGSPGPSSGGDRPAAGAATPKSCRSG 267
>ICP4_EHV1K (P17473) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 30.8 bits (68), Expect = 1.9 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = -1 Query: 151 SPRRAYLPNTHRSPPPAAEPGVRDGGLRYARGGGRPACLRDG 26 +PR + N ++P A PG GG R A G P R G Sbjct: 226 TPRPRHSQNAAKTPSAAGSPGPSSGGDRPAAGAATPKSCRSG 267
>ICP4_EHV1B (P28925) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 30.8 bits (68), Expect = 1.9 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = -1 Query: 151 SPRRAYLPNTHRSPPPAAEPGVRDGGLRYARGGGRPACLRDG 26 +PR + N ++P A PG GG R A G P R G Sbjct: 226 TPRPRHSQNAAKTPSAAGSPGPSSGGDRPAAGAATPKSCRSG 267
>1433_HELAN (O65352) 14-3-3-like protein| Length = 259 Score = 30.4 bits (67), Expect = 2.5 Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 8/107 (7%) Frame = +3 Query: 147 GDMSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVN 326 G SG DSK F KG+ E + D+RK A + ++A +D+++ + Sbjct: 117 GSASGGDSKVFYLKMKGDYYRYLAEFKT--GDERKLAAENTLSAYKAAQDIANAELAPTH 174 Query: 327 CMQTENLELKKLVYLYLI--------NYAKSQPDLAILAVNTFVKDS 443 ++ L L V+ Y I N AK D AI ++T +DS Sbjct: 175 PIRL-GLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEDS 220
>FEN1A_ORYSA (Q9SXQ6) Flap endonuclease 1a (EC 3.1.-.-) (OsFEN-1a)| Length = 380 Score = 30.0 bits (66), Expect = 3.3 Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 6/86 (6%) Frame = +3 Query: 195 GEIPELKEELNSQYKDKRKDAVKKVIAAMTVG-KDVSSLFTD-VVNCMQTENLELKKLVY 368 G+ P+LK++ ++ KR+DA K++ A+ G KD F+ V + N E K+L+ Sbjct: 88 GKPPDLKKQELAKRYSKREDATKELTEAVEEGDKDAIEKFSKRTVKVTKQHNEECKRLLR 147 Query: 369 LYLINY----AKSQPDLAILAVNTFV 434 L + +++ + A L +N V Sbjct: 148 LMGVPVVEAPCEAEAECAALCINDMV 173
>RRF_WIGBR (Q8D2G5) Ribosome recycling factor (Ribosome-releasing factor)| (RRF) Length = 185 Score = 29.6 bits (65), Expect = 4.3 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 4/46 (8%) Frame = +3 Query: 246 RKDA---VKKVIAAMTVGKDVSSLFTDVVNCMQTENLE-LKKLVYL 371 R+DA +KK+I A T+GKD F +V+ + +E KK++ L Sbjct: 132 RRDANEKIKKLIKAKTIGKDEDKKFQEVIQNLTNSRIEDTKKILKL 177
>KINH_STRPU (P35978) Kinesin heavy chain| Length = 1031 Score = 29.6 bits (65), Expect = 4.3 Identities = 12/26 (46%), Positives = 13/26 (50%) Frame = -1 Query: 121 HRSPPPAAEPGVRDGGLRYARGGGRP 44 H P P G+R GG RGGG P Sbjct: 925 HPPPSPGGSTGIRGGGYSGIRGGGSP 950
>KR104_HUMAN (P60372) Keratin-associated protein 10-4 (Keratin-associated| protein 10.4) (High sulfur keratin-associated protein 10.4) (Keratin-associated protein 18-4) (Keratin-associated protein 18.4) Length = 401 Score = 29.3 bits (64), Expect = 5.6 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 6/66 (9%) Frame = +2 Query: 254 CCQESDC------SNDCWKRCLIIVYGCCELYAD*ELGAEKTSILISHQLC*KSTRPSDT 415 CCQ+S C S+ C + C + V CC+ + +E +S C + S Sbjct: 208 CCQQSSCQPACCTSSSCQQACCVPV--CCKTVCCKPVCSEDSSSCCQQSSCQPACCTSSP 265 Query: 416 CREHIC 433 C++ C Sbjct: 266 CQQACC 271
>RNZ_BRAJA (Q89NF8) Ribonuclease Z (EC 3.1.26.11) (RNase Z) (tRNase Z) (tRNA 3| endonuclease) Length = 301 Score = 28.9 bits (63), Expect = 7.3 Identities = 15/36 (41%), Positives = 17/36 (47%) Frame = -1 Query: 121 HRSPPPAAEPGVRDGGLRYARGGGRPACLRDGMGLD 14 H P A GV DG LR GRP + DG +D Sbjct: 157 HLLPDRLASLGVPDGPLRGELAQGRPVVIEDGRTID 192
>KR102_HUMAN (P60368) Keratin-associated protein 10-2 (Keratin-associated| protein 10.2) (High sulfur keratin-associated protein 10.2) (Keratin-associated protein 18-2) (Keratin-associated protein 18.2) Length = 255 Score = 28.9 bits (63), Expect = 7.3 Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 6/66 (9%) Frame = +2 Query: 254 CCQESDC------SNDCWKRCLIIVYGCCELYAD*ELGAEKTSILISHQLC*KSTRPSDT 415 CCQ+S C S+ C + C + V CC+ +E +S C + S Sbjct: 120 CCQQSSCQPACCASSSCQQSCRVPV--CCKAVCCVPTCSESSSSCCQQSSCQPACCTSSP 177 Query: 416 CREHIC 433 C++ C Sbjct: 178 CQQSCC 183
>TARSH_HUMAN (Q7Z7G0) Target of Nesh-SH3 precursor (Tarsh) (Nesh-binding| protein) (NeshBP) (ABI gene family member 3-binding protein) Length = 1075 Score = 28.5 bits (62), Expect = 9.6 Identities = 16/36 (44%), Positives = 18/36 (50%) Frame = +2 Query: 5 PRRVQSHPIAQTGRPPATARISEASITNPGLRSRRR 112 PRR P TG+P + IS IT P LRS R Sbjct: 716 PRRKPLPPNNVTGKPGSAGIISSGPITTPPLRSTPR 751
>DPOLA_ORYSA (O48653) DNA polymerase alpha catalytic subunit (EC 2.7.7.7)| Length = 1534 Score = 28.5 bits (62), Expect = 9.6 Identities = 14/46 (30%), Positives = 23/46 (50%) Frame = -1 Query: 193 FLVVEKYLESCPLISPRRAYLPNTHRSPPPAAEPGVRDGGLRYARG 56 F+V +K+ S S +R P+T + P A+P + D G +G Sbjct: 852 FIVPDKFARSKEFNSTKRKMNPDTEAARPDEADPSIDDEGHHVDQG 897
>ROCK1_PANTR (P61584) Rho-associated protein kinase 1 (EC 2.7.11.1)| (Rho-associated, coiled-coil-containing protein kinase 1) (p160 ROCK-1) (p160ROCK) (Fragment) Length = 1003 Score = 28.5 bits (62), Expect = 9.6 Identities = 13/33 (39%), Positives = 23/33 (69%) Frame = +3 Query: 171 KYFSTTKKGEIPELKEELNSQYKDKRKDAVKKV 269 +YFST K ++ ELKEE+ ++K ++ +KK+ Sbjct: 499 QYFSTLYKTQVKELKEEI----EEKNRENLKKI 527
>ROCK1_BOVIN (Q8MIT6) Rho-associated protein kinase 1 (EC 2.7.11.1)| (Rho-associated, coiled-coil-containing protein kinase 1) (p160 ROCK-1) (p160ROCK) (Fragment) Length = 441 Score = 28.5 bits (62), Expect = 9.6 Identities = 13/33 (39%), Positives = 23/33 (69%) Frame = +3 Query: 171 KYFSTTKKGEIPELKEELNSQYKDKRKDAVKKV 269 +YFST K ++ ELKEE+ ++K ++ +KK+ Sbjct: 257 QYFSTLYKTQVKELKEEI----EEKNRENLKKI 285
>LEA2_CICAR (O49817) Late embryogenesis abundant protein 2 (CapLEA-2)| Length = 155 Score = 28.5 bits (62), Expect = 9.6 Identities = 15/51 (29%), Positives = 23/51 (45%) Frame = +3 Query: 153 MSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSS 305 M+ HD Y + KG E ++ +DK + A +K A KD +S Sbjct: 1 MTSHDQSYRAGEAKGRTEEKTNQMIGNIEDKAQAAKEKAQQAAQTAKDKTS 51
>KR105_HUMAN (P60370) Keratin-associated protein 10-5 (Keratin-associated| protein 10.5) (High sulfur keratin-associated protein 10.5) (Keratin-associated protein 18-5) (Keratin-associated protein 18.5) Length = 271 Score = 28.5 bits (62), Expect = 9.6 Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 6/63 (9%) Frame = +2 Query: 254 CCQESDC------SNDCWKRCLIIVYGCCELYAD*ELGAEKTSILISHQLC*KSTRPSDT 415 CCQ+S C S+ C + C + V CC+ +E +S H C + S Sbjct: 110 CCQQSSCQPTCCASSSCQQSCCVPV--CCKPVCCVPTCSEDSSSCCQHSSCQPTCCTSSP 167 Query: 416 CRE 424 C++ Sbjct: 168 CQQ 170
>ATRIP_DROME (Q9VVN4) ATR-interacting protein mus304 (Mutagen-sensivite protein| 304) Length = 846 Score = 28.5 bits (62), Expect = 9.6 Identities = 15/64 (23%), Positives = 31/64 (48%) Frame = +3 Query: 165 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 344 DSK + K GE+ L++EL + + ++K+ A +D + + + ++ Sbjct: 201 DSKERNEIKSGEVSLLRDELKHLRQQLQASKMEKLALADETNRDCNKKVAEAAKQIAAKD 260 Query: 345 LELK 356 +ELK Sbjct: 261 IELK 264
>MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog| (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3) (EC 2.1.1.43) (Homologous to ALR protein) Length = 4911 Score = 28.5 bits (62), Expect = 9.6 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 2/39 (5%) Frame = -1 Query: 160 PLISPRRAYLPNTHRSP--PPAAEPGVRDGGLRYARGGG 50 P + PR A P R P P A G+R G R+ GG Sbjct: 2449 PPLGPRYAVFPKDQRGPYPPDVASMGMRPHGFRFGFPGG 2487
>ROCK1_RABIT (O77819) Rho-associated protein kinase 1 (EC 2.7.11.1)| (Rho-associated, coiled-coil-containing protein kinase 1) (p160 ROCK-1) (p160ROCK) (cAMP-dependent protein kinase ROCK-I) (CePKA) (Corneal epithelial Rho-associated-Ser/Thr kinase 1) (HEB Length = 1354 Score = 28.5 bits (62), Expect = 9.6 Identities = 13/33 (39%), Positives = 23/33 (69%) Frame = +3 Query: 171 KYFSTTKKGEIPELKEELNSQYKDKRKDAVKKV 269 +YFST K ++ ELKEE+ ++K ++ +KK+ Sbjct: 850 QYFSTLYKTQVKELKEEI----EEKNRENLKKI 878
>ROCK1_HUMAN (Q13464) Rho-associated protein kinase 1 (EC 2.7.11.1)| (Rho-associated, coiled-coil-containing protein kinase 1) (p160 ROCK-1) (p160ROCK) (NY-REN-35 antigen) Length = 1354 Score = 28.5 bits (62), Expect = 9.6 Identities = 13/33 (39%), Positives = 23/33 (69%) Frame = +3 Query: 171 KYFSTTKKGEIPELKEELNSQYKDKRKDAVKKV 269 +YFST K ++ ELKEE+ ++K ++ +KK+ Sbjct: 850 QYFSTLYKTQVKELKEEI----EEKNRENLKKI 878
>NELFA_HUMAN (Q9H3P2) Negative elongation factor A (NELF-A) (Wolf-Hirschhorn| syndrome candidate 2 protein) Length = 549 Score = 28.5 bits (62), Expect = 9.6 Identities = 12/38 (31%), Positives = 19/38 (50%) Frame = -1 Query: 196 PFLVVEKYLESCPLISPRRAYLPNTHRSPPPAAEPGVR 83 P L YL S P + P +Y+P++ P P++ R Sbjct: 338 PALPSTSYLPSTPSVVPASSYIPSSETPPAPSSREASR 375 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,504,304 Number of Sequences: 219361 Number of extensions: 1199040 Number of successful extensions: 4370 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 4125 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4362 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3246866728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
