Clone Name | bastl31g01 |
---|---|
Clone Library Name | barley_pub |
>IF41_WHEAT (Q03387) Eukaryotic initiation factor iso-4F subunit p82-34| (eIF-(iso)4F p82-34) Length = 788 Score = 34.3 bits (77), Expect = 0.087 Identities = 19/32 (59%), Positives = 19/32 (59%) Frame = +1 Query: 157 MTTDQPVISLXXXXXXXXXXXXXLFAPAFAVA 252 MTTDQPVISL LFAPAFAVA Sbjct: 1 MTTDQPVISLRPGGGGGGPRGGRLFAPAFAVA 32
>PDE2A_HUMAN (O00408) cGMP-dependent 3',5'-cyclic phosphodiesterase (EC| 3.1.4.17) (Cyclic GMP-stimulated phosphodiesterase) (CGS-PDE) (cGSPDE) Length = 941 Score = 30.4 bits (67), Expect = 1.3 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = +3 Query: 12 RSQTEPNPPPREEGKKKLGFLRDFPPGAPPIPCRSSCRGALVGFGTL 152 RSQ P P E +++ FL+ P PP PC S + AL+ G++ Sbjct: 12 RSQQYPAARPAEPRGQQV-FLKPDEPPPPPQPCADSLQDALLSLGSV 57
>STK6_XENLA (Q91820) Serine/threonine-protein kinase Eg2 (EC 2.7.11.1) (pEg2)| (p46Eg265) Length = 407 Score = 29.3 bits (64), Expect = 2.8 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = +3 Query: 6 GERSQTEPNPPPREEGKKKLGFLRDFPPGAP 98 G Q + + P+EEGKKK L DF G P Sbjct: 115 GSTDQGKTSAVPKEEGKKKQWCLEDFEIGRP 145
>PTN12_HUMAN (Q05209) Tyrosine-protein phosphatase non-receptor type 12 (EC| 3.1.3.48) (Protein-tyrosine phosphatase G1) (PTPG1) Length = 780 Score = 28.5 bits (62), Expect = 4.8 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = +1 Query: 82 SPPAPRRFPVDRAAAVPWSGSGP 150 +PP P R P+D V WS GP Sbjct: 519 TPPRPDRLPLDEKGHVTWSFHGP 541
>GMIP_MOUSE (Q6PGG2) GEM-interacting protein (GMIP)| Length = 971 Score = 28.1 bits (61), Expect = 6.2 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +3 Query: 39 PREEGKKKLGFLRDFPPGAPPIPCRSSC 122 P E G++ F+R PGAPP P + C Sbjct: 342 PFEPGQRYQEFVRTLQPGAPPPPSPAFC 369
>PRP28_ASPOR (Q2UH00) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 803 Score = 25.0 bits (53), Expect(2) = 7.6 Identities = 11/24 (45%), Positives = 13/24 (54%) Frame = +3 Query: 27 PNPPPREEGKKKLGFLRDFPPGAP 98 P PPP E KKK+G+ P P Sbjct: 57 PAPPPPEPKKKKVGWGAKKPAATP 80 Score = 21.2 bits (43), Expect(2) = 7.6 Identities = 8/13 (61%), Positives = 8/13 (61%) Frame = +3 Query: 9 ERSQTEPNPPPRE 47 ER T P PPP E Sbjct: 23 ERPPTPPPPPPEE 35
>MK07_HUMAN (Q13164) Mitogen-activated protein kinase 7 (EC 2.7.11.24)| (Extracellular signal-regulated kinase 5) (ERK-5) (ERK4) (BMK1 kinase) Length = 815 Score = 27.7 bits (60), Expect = 8.1 Identities = 12/23 (52%), Positives = 12/23 (52%) Frame = +3 Query: 33 PPPREEGKKKLGFLRDFPPGAPP 101 PPP G G L FPPG PP Sbjct: 670 PPPGLPGSSTPGVLPYFPPGLPP 692
>STK6L_XENLA (Q91819) Serine/threonine-protein kinase Eg2-like (EC 2.7.11.1)| (p46XlEg22) Length = 408 Score = 27.7 bits (60), Expect = 8.1 Identities = 14/31 (45%), Positives = 16/31 (51%) Frame = +3 Query: 6 GERSQTEPNPPPREEGKKKLGFLRDFPPGAP 98 G Q + P+EEGKKK L DF G P Sbjct: 115 GSTDQGKTLAVPKEEGKKKQWCLEDFEIGRP 145
>SPR2F_MOUSE (O70557) Small proline-rich protein 2F| Length = 76 Score = 27.7 bits (60), Expect = 8.1 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +3 Query: 24 EPNPPPREEGKKKLGFLRDFPPGAPPIPCRSSC 122 EP PPP F + PP PP PC+ C Sbjct: 47 EPCPPP--------SFQQKCPPVQPPPPCQQKC 71 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 28,215,997 Number of Sequences: 219361 Number of extensions: 485747 Number of successful extensions: 1931 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1775 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1927 length of database: 80,573,946 effective HSP length: 60 effective length of database: 67,412,286 effective search space used: 1617894864 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)