Clone Name | bastl31f07 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_185174.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1584 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 266 ctggcccggcggcacgggccggtgatgatggtccggctgggcatggtcccggcggtggtg 325 ||||| |||||||||||||||||||||||| | ||||||||| ||| |||||||||||| Sbjct: 223 ctggcgcggcggcacgggccggtgatgatgctgcggctgggcgcggtgccggcggtggtg 282 Query: 326 ctgtc 330 |||| Sbjct: 283 gtgtc 287
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 266 ctggcccggcggcacgggccggtgatgatggtccggctgggcatggtcccggcggtggtg 325 ||||| |||||||||||||||||||||||| | ||||||||| ||| |||||||||||| Sbjct: 35474293 ctggcgcggcggcacgggccggtgatgatgctgcggctgggcgcggtgccggcggtggtg 35474352 Query: 326 ctgtc 330 |||| Sbjct: 35474353 gtgtc 35474357 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 gcggcggccgcggaggaggc 354 |||||||||||||||||||| Sbjct: 23192680 gcggcggccgcggaggaggc 23192699 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 cgacggcggcggccgcggaggagg 353 ||||||||||||| |||||||||| Sbjct: 21323147 cgacggcggcggcggcggaggagg 21323170 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 ggcaacctgcaccagatcgg 237 |||||||||||||||||||| Sbjct: 20358072 ggcaacctgcaccagatcgg 20358091 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 gtcgacggcggcggccgcgg 347 |||||||||||||||||||| Sbjct: 15819255 gtcgacggcggcggccgcgg 15819236 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 cgacggcggcggccgcggaggagg 353 ||||||||||||| |||||||||| Sbjct: 15162059 cgacggcggcggcggcggaggagg 15162082
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 266 ctggcccggcggcacgggccggtgatgatggtccggctgggcatggtcccggcggtggtg 325 ||||| |||||||||||||||||||||||| | ||||||||| ||| |||||||||||| Sbjct: 35564365 ctggcgcggcggcacgggccggtgatgatgctgcggctgggcgcggtgccggcggtggtg 35564424 Query: 326 ctgtc 330 |||| Sbjct: 35564425 gtgtc 35564429 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 gcggcggccgcggaggaggc 354 |||||||||||||||||||| Sbjct: 23185708 gcggcggccgcggaggaggc 23185727 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 cgacggcggcggccgcggaggagg 353 ||||||||||||| |||||||||| Sbjct: 21316176 cgacggcggcggcggcggaggagg 21316199 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 ggcaacctgcaccagatcgg 237 |||||||||||||||||||| Sbjct: 20351101 ggcaacctgcaccagatcgg 20351120 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 gtcgacggcggcggccgcgg 347 |||||||||||||||||||| Sbjct: 15813789 gtcgacggcggcggccgcgg 15813770 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 cgacggcggcggccgcggaggagg 353 ||||||||||||| |||||||||| Sbjct: 15156593 cgacggcggcggcggcggaggagg 15156616
>gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genomic sequence, complete sequence Length = 133846 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 266 ctggcccggcggcacgggccggtgatgatggtccggctgggcatggtcccggcggtggtg 325 ||||| |||||||||||||||||||||||| | ||||||||| ||| |||||||||||| Sbjct: 13333 ctggcgcggcggcacgggccggtgatgatgctgcggctgggcgcggtgccggcggtggtg 13274 Query: 326 ctgtc 330 |||| Sbjct: 13273 gtgtc 13269
>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete sequence Length = 145290 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 266 ctggcccggcggcacgggccggtgatgatggtccggctgggcatggtcccggcggtggtg 325 ||||| |||||||||||||||||||||||| | ||||||||| ||| |||||||||||| Sbjct: 7256 ctggcgcggcggcacgggccggtgatgatgctgcggctgggcgcggtgccggcggtggtg 7315 Query: 326 ctgtc 330 |||| Sbjct: 7316 gtgtc 7320
>ref|NM_127297.4| Arabidopsis thaliana NTRA AT2G17420 (NTRA) mRNA, complete cds Length = 1469 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 327 tgtcgacggcggcggccgcggaggagg 353 |||||||||||||||| |||||||||| Sbjct: 157 tgtcgacggcggcggcggcggaggagg 131
>ref|XM_392382.2| PREDICTED: Apis mellifera similar to Hypoxia-inducible factor 1 alpha (HIF-1 alpha) (HIF1 alpha) (ARNT interacting protein) (LOC408852), mRNA Length = 5028 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 331 gacggcggcggccgcggaggagg 353 ||||||||||||||||||||||| Sbjct: 789 gacggcggcggccgcggaggagg 767
>gb|AC002329.2|AC002329 Arabidopsis thaliana chromosome II section 100 of 255 of the complete sequence. Sequence from clones T23A1, F5J6, MJB20 Length = 76170 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 327 tgtcgacggcggcggccgcggaggagg 353 |||||||||||||||| |||||||||| Sbjct: 65318 tgtcgacggcggcggcggcggaggagg 65292
>ref|NM_192703.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 666 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 329 tcgacggcggcggccgcggagg 350 |||||||||||||||||||||| Sbjct: 398 tcgacggcggcggccgcggagg 377
>gb|AC147004.2| Homo sapiens chromosome 8, clone RP13-895A16, complete sequence Length = 109297 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 99 tcctcctcctcccactggcctccttcctcctcac 132 ||||||||||| ||| || ||||||||||||||| Sbjct: 95 tcctcctcctcacacgggactccttcctcctcac 128
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29 Length = 295150 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 332 acggcggcggccgcggaggagg 353 |||||||||||||||||||||| Sbjct: 49556 acggcggcggccgcggaggagg 49577
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 329 tcgacggcggcggccgcggagg 350 |||||||||||||||||||||| Sbjct: 23915866 tcgacggcggcggccgcggagg 23915845 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 gtcgacggcggcggccgcgg 347 |||||||||||||||||||| Sbjct: 35583844 gtcgacggcggcggccgcgg 35583825 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 gtcgacggcggcggccgcgg 347 |||||||||||||||||||| Sbjct: 35583788 gtcgacggcggcggccgcgg 35583769 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 cgacggcggcggccgcggag 349 |||||||||||||||||||| Sbjct: 35020359 cgacggcggcggccgcggag 35020378 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 gtcgacggcggcggccgcgg 347 |||||||||||||||||||| Sbjct: 25943236 gtcgacggcggcggccgcgg 25943255
>dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0704D04 Length = 147638 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 329 tcgacggcggcggccgcggagg 350 |||||||||||||||||||||| Sbjct: 62270 tcgacggcggcggccgcggagg 62249
>dbj|AP003216.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0090K04 Length = 152556 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 329 tcgacggcggcggccgcggagg 350 |||||||||||||||||||||| Sbjct: 30388 tcgacggcggcggccgcggagg 30367
>gb|AE005044.1| Halobacterium sp. NRC-1 section 75 of 170 of the complete genome Length = 13431 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 322 ggtgctgtcgacggcggcggcc 343 |||||||||||||||||||||| Sbjct: 9040 ggtgctgtcgacggcggcggcc 9019 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 cgacggcggcggccgcggag 349 |||||||||||||||||||| Sbjct: 9828 cgacggcggcggccgcggag 9809
>gb|AY108705.1| Zea mays PCO142716 mRNA sequence Length = 592 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 319 ggtggtgctgtcgacggcggcggccg 344 |||||||||| ||||||||||||||| Sbjct: 95 ggtggtgctggcgacggcggcggccg 120
>ref|XM_601920.2| PREDICTED: Bos taurus similar to Immediate early response gene 5 protein (LOC523618), mRNA Length = 2632 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 333 cggcggcggccgcggaggagg 353 ||||||||||||||||||||| Sbjct: 1430 cggcggcggccgcggaggagg 1450
>gb|BC069042.1| Mus musculus cDNA clone IMAGE:5696108, partial cds Length = 2770 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 333 cggcggcggccgcggaggagg 353 ||||||||||||||||||||| Sbjct: 2254 cggcggcggccgcggaggagg 2274
>ref|XM_993958.1| PREDICTED: Mus musculus hypothetical LOC634725 (LOC634725), mRNA Length = 976 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 333 cggcggcggccgcggaggagg 353 ||||||||||||||||||||| Sbjct: 121 cggcggcggccgcggaggagg 141
>ref|XM_921343.2| PREDICTED: Mus musculus hypothetical LOC634725 (LOC634725), mRNA Length = 1099 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 333 cggcggcggccgcggaggagg 353 ||||||||||||||||||||| Sbjct: 121 cggcggcggccgcggaggagg 141
>ref|XM_986499.1| PREDICTED: Mus musculus hypothetical protein LOC666856 (LOC666856), mRNA Length = 1098 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 333 cggcggcggccgcggaggagg 353 ||||||||||||||||||||| Sbjct: 121 cggcggcggccgcggaggagg 141
>emb|AL022316.2|HS126B4 Human DNA sequence from clone CTA-126B4 on chromosome 22q13.2-13.31, complete sequence Length = 156212 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 agccatcctcctcctcccact 114 ||||||||||||||||||||| Sbjct: 57880 agccatcctcctcctcccact 57860
>emb|AL606590.3|OSJN00031 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0052O21, complete sequence Length = 166475 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 330 cgacggcggcggccgcggaggaggc 354 ||||||||||||| ||||||||||| Sbjct: 29300 cgacggcggcggcggcggaggaggc 29324
>dbj|AB004268.1| Canis familiaris mRNA for CYP2D15, complete cds Length = 1631 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 tgcccatggtgggcaacctgc 227 ||||||||||||||||||||| Sbjct: 180 tgcccatggtgggcaacctgc 200
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 330 cgacggcggcggccgcggaggaggc 354 ||||||||||||| ||||||||||| Sbjct: 7008109 cgacggcggcggcggcggaggaggc 7008133 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 333 cggcggcggccgcggaggaggcct 356 |||||||||| ||||||||||||| Sbjct: 33614839 cggcggcggcggcggaggaggcct 33614816 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 cgacggcggcggccgcggaggagg 353 ||||||||||||| |||||||||| Sbjct: 5777101 cgacggcggcggctgcggaggagg 5777078
>gb|AF449424.1| Corylus avellana 11S globulin-like protein mRNA, complete cds Length = 1767 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 352 ggccttcaagaccaacgacaa 372 ||||||||||||||||||||| Sbjct: 1350 ggccttcaagaccaacgacaa 1370
>ref|NM_001003333.1| Canis familiaris cytochrome P450 2D (CYP2D15), mRNA Length = 1665 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 tgcccatggtgggcaacctgc 227 ||||||||||||||||||||| Sbjct: 214 tgcccatggtgggcaacctgc 234
>dbj|AK109937.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-E09, full insert sequence Length = 935 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 330 cgacggcggcggccgcggaggaggc 354 ||||||||||||| ||||||||||| Sbjct: 368 cgacggcggcggcggcggaggaggc 344
>dbj|AK107177.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-G10, full insert sequence Length = 1003 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 330 cgacggcggcggccgcggaggaggc 354 ||||||||||||| ||||||||||| Sbjct: 286 cgacggcggcggcggcggaggaggc 262
>gb|AC006409.2|AC006409 Homo sapiens Chromosome 11q12.2 PAC clone pDJ52b24 containing homology to human acidic ribosomal phosphoprotein PO cds, complete sequence Length = 114339 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 tcctcctcctcccactggcct 119 ||||||||||||||||||||| Sbjct: 81415 tcctcctcctcccactggcct 81395
>dbj|AP003559.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-794G24, complete sequence Length = 181439 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 tcctcctcctcccactggcct 119 ||||||||||||||||||||| Sbjct: 141764 tcctcctcctcccactggcct 141784
>dbj|D17397.1|DOGCYP2D Canis familiaris CYP2D mRNA for P-450 2D, complete cds Length = 1665 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 tgcccatggtgggcaacctgc 227 ||||||||||||||||||||| Sbjct: 214 tgcccatggtgggcaacctgc 234
>emb|CT025642.13| Mouse DNA sequence from clone RP23-471B6 on chromosome 13, complete sequence Length = 175367 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 333 cggcggcggccgcggaggagg 353 ||||||||||||||||||||| Sbjct: 126801 cggcggcggccgcggaggagg 126821
>gb|U65744.1|HSU65744 Human chromosome 11 cosmid A9 including cellutagmin II gene, complete sequence Length = 40108 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 tcctcctcctcccactggcct 119 ||||||||||||||||||||| Sbjct: 13359 tcctcctcctcccactggcct 13339
>emb|AL714021.12| Mouse DNA sequence from clone RP23-305F20 on chromosome X, complete sequence Length = 182607 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 ggcctccttcctcctcacccg 135 ||||||||||||||||||||| Sbjct: 172263 ggcctccttcctcctcacccg 172283
>ref|NM_185677.1| Oryza sativa (japonica cultivar-group), Ozsa8028 predicted mRNA Length = 4848 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 cgacggcggcggccgcggaggagg 353 ||||||||||||| |||||||||| Sbjct: 35 cgacggcggcggcggcggaggagg 58
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 ggcggtggtgctgtcgacgg 335 |||||||||||||||||||| Sbjct: 3376499 ggcggtggtgctgtcgacgg 3376480
>ref|XM_512156.1| PREDICTED: Pan troglodytes similar to KIAA1983 protein (LOC455449), mRNA Length = 1587 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 cggcggcggccgcggaggag 352 |||||||||||||||||||| Sbjct: 951 cggcggcggccgcggaggag 970
>ref|XM_474698.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1647 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 cgacggcggcggccgcggaggagg 353 ||||||||||||| |||||||||| Sbjct: 821 cgacggcggcggctgcggaggagg 844
>ref|XM_474192.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1866 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 333 cggcggcggccgcggaggaggcct 356 |||||||||| ||||||||||||| Sbjct: 619 cggcggcggcggcggaggaggcct 596
>ref|XM_507838.1| PREDICTED: Pan troglodytes a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 14 (LOC450513), mRNA Length = 6843 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 tcctcccactggcctccttc 124 |||||||||||||||||||| Sbjct: 1879 tcctcccactggcctccttc 1860
>ref|XM_464369.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1791 Score = 40.1 bits (20), Expect = 6.3 Identities = 53/64 (82%) Strand = Plus / Plus Query: 172 tggcggccttaggctgccaccgtgcccgtggaggctgcccatggtgggcaacctgcacca 231 ||||||| | |||||||| || | |||||| ||||||| || | |||||||||||||| Sbjct: 155 tggcggcatgaggctgccgcctgggccgtggcggctgccggtgatcggcaacctgcacca 214 Query: 232 gatc 235 |||| Sbjct: 215 gatc 218
>gb|AC158954.17| Mus musculus chromosome 15, clone RP23-213P14, complete sequence Length = 188940 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 gccatcctcctcctcccact 114 |||||||||||||||||||| Sbjct: 124798 gccatcctcctcctcccact 124817
>ref|NM_184766.1| Oryza sativa (japonica cultivar-group), mRNA Length = 435 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 ggcaacctgcaccagatcgg 237 |||||||||||||||||||| Sbjct: 131 ggcaacctgcaccagatcgg 150
>ref|NM_190446.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1560 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 gtcgacggcggcggccgcgg 347 |||||||||||||||||||| Sbjct: 1206 gtcgacggcggcggccgcgg 1225 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 gtcgacggcggcggccgcgg 347 |||||||||||||||||||| Sbjct: 1150 gtcgacggcggcggccgcgg 1169
>ref|NM_192305.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 552 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 gtcgacggcggcggccgcgg 347 |||||||||||||||||||| Sbjct: 54 gtcgacggcggcggccgcgg 73
>ref|NM_190354.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1128 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 cgacggcggcggccgcggag 349 |||||||||||||||||||| Sbjct: 181 cgacggcggcggccgcggag 162
>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004P24, complete sequence Length = 137721 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 gcggcggccgcggaggaggc 354 |||||||||||||||||||| Sbjct: 18488 gcggcggccgcggaggaggc 18507
>gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0599F04, complete sequence Length = 169073 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 cgacggcggcggccgcggaggagg 353 ||||||||||||| |||||||||| Sbjct: 77306 cgacggcggcggcggcggaggagg 77283
>gb|AC079853.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0004M10, complete sequence Length = 152423 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 gtcgacggcggcggccgcgg 347 |||||||||||||||||||| Sbjct: 81055 gtcgacggcggcggccgcgg 81036
>gb|AC146521.2| Oryza sativa chromosome 3 B1246D11 genomic sequence, complete sequence Length = 43277 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 cgacggcggcggccgcggaggagg 353 ||||||||||||| |||||||||| Sbjct: 25008 cgacggcggcggcggcggaggagg 24985
>gb|AC107206.4| Oryza sativa chromosome 3 BAC OSJNBa0063J18 genomic sequence, complete sequence Length = 154558 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 gcggcggccgcggaggaggc 354 |||||||||||||||||||| Sbjct: 29161 gcggcggccgcggaggaggc 29180
>gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genomic sequence, complete sequence Length = 190055 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 cgacggcggcggccgcggaggagg 353 ||||||||||||| |||||||||| Sbjct: 16058 cgacggcggcggcggcggaggagg 16081
>gb|AC134908.5| Mus musculus BAC clone RP23-377L13 from chromosome 17, complete sequence Length = 189458 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 cggcggcggccgcggaggag 352 |||||||||||||||||||| Sbjct: 182964 cggcggcggccgcggaggag 182983
>gb|AF536965.1| Oryza sativa (japonica cultivar-group) putative phosphate transporter OsPT5 gene, complete cds Length = 2199 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 cgacggcggcggccgcggaggagg 353 ||||||||||||| |||||||||| Sbjct: 812 cgacggcggcggctgcggaggagg 835
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 ccttcaagaccaacgacaag 373 |||||||||||||||||||| Sbjct: 2499675 ccttcaagaccaacgacaag 2499656
>emb|AL360298.14| Human DNA sequence from clone RP11-39H13 on chromosome 1 Contains a novel gene, complete sequence Length = 107835 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 tcctcctcctcccactggcctcct 122 |||| ||||||||||||||||||| Sbjct: 32468 tccttctcctcccactggcctcct 32445
>emb|AL049773.1|HS10618A Human DNA sequence from clone RP5-1061O18 on chromosome 22q13.32-13.33 Contains a GSS, complete sequence Length = 45333 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 aatggctgctgcttcccttg 56 |||||||||||||||||||| Sbjct: 44209 aatggctgctgcttcccttg 44190
>emb|AL035404.20|HS144F13 Human DNA sequence from clone RP1-144F13 on chromosome 1p33-34.3 Contains the HEYL gene for hairy/enhancer-of-split related protein with YRPW-like motif, a novel gene, the NT5C1A gene for cytosolic IA 5'-nucleotidase, the HPCAL4 gene for hippocalcin like 4, a novel pseudogene, the 5' end of the PPIE gene for peptidylprolyl isomerase E (cyclophilin E) and six CpG islands, complete sequence Length = 154412 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 catggtcccggcggtggtgc 326 |||||||||||||||||||| Sbjct: 132555 catggtcccggcggtggtgc 132536
>ref|XM_775510.1| PREDICTED: Strongylocentrotus purpuratus similar to Ly1 antibody reactive clone (LOC575094), mRNA Length = 2335 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 ccaagcaggaacaatggctgctgc 48 |||| ||||||||||||||||||| Sbjct: 387 ccaaacaggaacaatggctgctgc 410
>gb|AE008847.1| Salmonella typhimurium LT2, section 151 of 220 of the complete genome Length = 20604 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 301 gctgggcatggtcccggcggtggtgctg 328 |||||||||| | ||||||||||||||| Sbjct: 13366 gctgggcatgattccggcggtggtgctg 13339
>gb|AC159277.3| Mus musculus BAC clone RP23-356J2 from chromosome 17, complete sequence Length = 231245 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 cggcggcggccgcggaggag 352 |||||||||||||||||||| Sbjct: 224340 cggcggcggccgcggaggag 224321
>emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genome; segment 9/16 Length = 348580 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 cggcggcggccgcggaggag 352 |||||||||||||||||||| Sbjct: 337901 cggcggcggccgcggaggag 337920
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cccaccgggacctggcacgg 265 |||||||||||||||||||| Sbjct: 153613 cccaccgggacctggcacgg 153594
>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23, complete sequence Length = 149353 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 333 cggcggcggccgcggaggaggcct 356 |||||||||| ||||||||||||| Sbjct: 45899 cggcggcggcggcggaggaggcct 45876
>emb|AL627278.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 14/20 Length = 258050 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 301 gctgggcatggtcccggcggtggtgctg 328 |||||||||| | ||||||||||||||| Sbjct: 22602 gctgggcatgattccggcggtggtgctg 22575
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 301 gctgggcatggtcccggcggtggtgctg 328 |||||||||| | ||||||||||||||| Sbjct: 472538 gctgggcatgattccggcggtggtgctg 472565
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 318 cggtggtgctgtcgacggcggcggccgc 345 |||||||||||||| ||||||| ||||| Sbjct: 3636870 cggtggtgctgtcggcggcggccgccgc 3636843
>emb|CR607285.1| full-length cDNA clone CS0DF038YK15 of Fetal brain of Homo sapiens (human) Length = 1946 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 agcaggaacaatggctgctgcttc 51 |||||||| ||||||||||||||| Sbjct: 301 agcaggaataatggctgctgcttc 324
>tpg|BK000913.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M315, complete sequence Length = 11313 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 gcggcggccgcggaggaggc 354 |||||||||||||||||||| Sbjct: 5339 gcggcggccgcggaggaggc 5320
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 gcacggctggcccggcggca 279 |||||||||||||||||||| Sbjct: 1534988 gcacggctggcccggcggca 1535007
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 tggtgctgtcgacggcggcggccg 344 ||||||||||| |||||||||||| Sbjct: 3280504 tggtgctgtcggcggcggcggccg 3280481
>gb|AC098847.4| Homo sapiens chromosome 18, clone RP11-824M15, complete sequence Length = 206693 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 cggcggcggccgcggaggag 352 |||||||||||||||||||| Sbjct: 40412 cggcggcggccgcggaggag 40393
>gb|AC010776.10| Homo sapiens chromosome 18, clone RP11-2N1, complete sequence Length = 181252 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 cggcggcggccgcggaggag 352 |||||||||||||||||||| Sbjct: 18866 cggcggcggccgcggaggag 18885
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 ggcggcacgggccggtgatg 292 |||||||||||||||||||| Sbjct: 685540 ggcggcacgggccggtgatg 685559
>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence Length = 181577 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 333 cggcggcggccgcggaggaggcct 356 |||||||||| ||||||||||||| Sbjct: 46092 cggcggcggcggcggaggaggcct 46069
>gb|AC127185.3| Rattus norvegicus BAC CH230-28E5 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 233648 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 cggcggcggccgcggaggag 352 |||||||||||||||||||| Sbjct: 28518 cggcggcggccgcggaggag 28537
>gb|AC084404.8|AC084404 Oryza sativa chromosome 3 BAC OSJNBa0026A15 genomic sequence, complete sequence Length = 156929 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 ggcaacctgcaccagatcgg 237 |||||||||||||||||||| Sbjct: 153379 ggcaacctgcaccagatcgg 153398
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 gcggcggccgcggaggaggc 354 |||||||||||||||||||| Sbjct: 7798467 gcggcggccgcggaggaggc 7798448
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 ggcggcggccgcggaggagg 353 |||||||||||||||||||| Sbjct: 26872615 ggcggcggccgcggaggagg 26872596 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 gtcgacggcggcggccgcgg 347 |||||||||||||||||||| Sbjct: 21912386 gtcgacggcggcggccgcgg 21912367 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 gtcgacggcggcggccgcgg 347 |||||||||||||||||||| Sbjct: 8412091 gtcgacggcggcggccgcgg 8412072
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 gcggcggccgcggaggaggc 354 |||||||||||||||||||| Sbjct: 9203868 gcggcggccgcggaggaggc 9203849
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 gtcgacggcggcggccgcgg 347 |||||||||||||||||||| Sbjct: 28981738 gtcgacggcggcggccgcgg 28981757 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 gtcgacggcggcggccgcgg 347 |||||||||||||||||||| Sbjct: 28981682 gtcgacggcggcggccgcgg 28981701 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 cgacggcggcggccgcggaggagg 353 ||||||||||||| |||||||||| Sbjct: 3762024 cgacggcggcggcggcggaggagg 3762047
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 cgacggcggcggccgcggaggagg 353 ||||||||||||| |||||||||| Sbjct: 25560899 cgacggcggcggcggcggaggagg 25560876
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 317 gcggtggtgctgtcgacggcggcggccgcgga 348 ||||||||| || || |||||||||||||||| Sbjct: 31829766 gcggtggtggtggcgtcggcggcggccgcgga 31829735 Score = 40.1 bits (20), Expect = 6.3 Identities = 53/64 (82%) Strand = Plus / Plus Query: 172 tggcggccttaggctgccaccgtgcccgtggaggctgcccatggtgggcaacctgcacca 231 ||||||| | |||||||| || | |||||| ||||||| || | |||||||||||||| Sbjct: 4765301 tggcggcatgaggctgccgcctgggccgtggcggctgccggtgatcggcaacctgcacca 4765360 Query: 232 gatc 235 |||| Sbjct: 4765361 gatc 4765364
>emb|AL731620.2|OSJN00270 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0003A12, complete sequence Length = 164425 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 cgacggcggcggccgcggaggagg 353 ||||||||||||| |||||||||| Sbjct: 72087 cgacggcggcggctgcggaggagg 72064
>gb|AF337531.1|AF337531 Oryza rufipogon phosphate transporter mRNA, partial cds Length = 1002 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 cgacggcggcggccgcggaggagg 353 ||||||||||||| |||||||||| Sbjct: 711 cgacggcggcggctgcggaggagg 734
>gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B24 genomic sequence, complete sequence Length = 152883 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 ggcaacctgcaccagatcgg 237 |||||||||||||||||||| Sbjct: 2372 ggcaacctgcaccagatcgg 2391
>dbj|AP002910.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0707D10 Length = 172003 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 gtcgacggcggcggccgcgg 347 |||||||||||||||||||| Sbjct: 39303 gtcgacggcggcggccgcgg 39322
>gb|AC006487.9| Homo sapiens chromosome 17, clone RP5-1029K10, complete sequence Length = 186617 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 tgtagccatcctcctcctcc 110 |||||||||||||||||||| Sbjct: 32940 tgtagccatcctcctcctcc 32959
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 ggtcccggcggtggtgctgt 329 |||||||||||||||||||| Sbjct: 4702487 ggtcccggcggtggtgctgt 4702506 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 ggcggccgcggaggaggcct 356 |||||||||||||||||||| Sbjct: 2474645 ggcggccgcggaggaggcct 2474626
>gb|AC115109.2| Homo sapiens BAC clone RP11-78I10 from 2, complete sequence Length = 59356 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 ctcctcccactggcctcctt 123 |||||||||||||||||||| Sbjct: 20101 ctcctcccactggcctcctt 20120
>dbj|AP003252.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0446G04 Length = 143515 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 gtcgacggcggcggccgcgg 347 |||||||||||||||||||| Sbjct: 114031 gtcgacggcggcggccgcgg 114012 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 gtcgacggcggcggccgcgg 347 |||||||||||||||||||| Sbjct: 113975 gtcgacggcggcggccgcgg 113956
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 301 gctgggcatggtcccggcggtggtgctg 328 |||||||||| | ||||||||||||||| Sbjct: 3181560 gctgggcatgattccggcggtggtgctg 3181533
>gb|AF262998.1|AF262998 Ricinus communis legumin-like protein mRNA, complete cds Length = 1750 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gccttcaagaccaacgacaa 372 |||||||||||||||||||| Sbjct: 1240 gccttcaagaccaacgacaa 1259
>dbj|AP003907.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1217_D10 Length = 103188 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 gtcgacggcggcggccgcgg 347 |||||||||||||||||||| Sbjct: 27808 gtcgacggcggcggccgcgg 27789
>dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485B12 Length = 156047 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 cgacggcggcggccgcggag 349 |||||||||||||||||||| Sbjct: 27509 cgacggcggcggccgcggag 27528
>dbj|AP003302.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0703B11 Length = 144074 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 cgacggcggcggccgcggag 349 |||||||||||||||||||| Sbjct: 64587 cgacggcggcggccgcggag 64606
>dbj|AK181794.1| Mus musculus cDNA, clone:Y0G0119H09, strand:unspecified Length = 304 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 caccgtgcccgtggaggctg 208 |||||||||||||||||||| Sbjct: 258 caccgtgcccgtggaggctg 239
>dbj|AP004000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_B01 Length = 129329 Score = 40.1 bits (20), Expect = 6.3 Identities = 53/64 (82%) Strand = Plus / Plus Query: 172 tggcggccttaggctgccaccgtgcccgtggaggctgcccatggtgggcaacctgcacca 231 ||||||| | |||||||| || | |||||| ||||||| || | |||||||||||||| Sbjct: 45891 tggcggcatgaggctgccgcctgggccgtggcggctgccggtgatcggcaacctgcacca 45950 Query: 232 gatc 235 |||| Sbjct: 45951 gatc 45954
>dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1073_F05 Length = 124252 Score = 40.1 bits (20), Expect = 6.3 Identities = 53/64 (82%) Strand = Plus / Plus Query: 172 tggcggccttaggctgccaccgtgcccgtggaggctgcccatggtgggcaacctgcacca 231 ||||||| | |||||||| || | |||||| ||||||| || | |||||||||||||| Sbjct: 7460 tggcggcatgaggctgccgcctgggccgtggcggctgccggtgatcggcaacctgcacca 7519 Query: 232 gatc 235 |||| Sbjct: 7520 gatc 7523
>dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0014B15 Length = 158821 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 cgacggcggcggccgcggaggagg 353 ||||||||||||| |||||||||| Sbjct: 156252 cgacggcggcggcggcggaggagg 156275
>dbj|AP004278.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0468G03 Length = 143918 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 gtcgacggcggcggccgcgg 347 |||||||||||||||||||| Sbjct: 131782 gtcgacggcggcggccgcgg 131801 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 gtcgacggcggcggccgcgg 347 |||||||||||||||||||| Sbjct: 131726 gtcgacggcggcggccgcgg 131745
>dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0015E04 Length = 152046 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 cgacggcggcggccgcggaggagg 353 ||||||||||||| |||||||||| Sbjct: 19978 cgacggcggcggcggcggaggagg 20001
>gb|AY569610.1| Oryza sativa (japonica cultivar-group) phosphate transporter 5 mRNA, complete cds Length = 1722 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 cgacggcggcggccgcggaggagg 353 ||||||||||||| |||||||||| Sbjct: 821 cgacggcggcggctgcggaggagg 844
>dbj|AP005307.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0046D03 Length = 150554 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 gcggcggccgcggaggaggc 354 |||||||||||||||||||| Sbjct: 86741 gcggcggccgcggaggaggc 86722
>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0627E03 Length = 159861 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 317 gcggtggtgctgtcgacggcggcggccgcgga 348 ||||||||| || || |||||||||||||||| Sbjct: 125564 gcggtggtggtggcgtcggcggcggccgcgga 125533
>dbj|AP004558.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0409A07 Length = 146663 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 gtcgacggcggcggccgcgg 347 |||||||||||||||||||| Sbjct: 113055 gtcgacggcggcggccgcgg 113036
>dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0665C04 Length = 177054 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 ggcggcggccgcggaggagg 353 |||||||||||||||||||| Sbjct: 135405 ggcggcggccgcggaggagg 135386
>dbj|AK121123.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074J24, full insert sequence Length = 3290 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 ggcggcggccgcggaggagg 353 |||||||||||||||||||| Sbjct: 131 ggcggcggccgcggaggagg 150
>dbj|AK073864.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073P17, full insert sequence Length = 1560 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 gtcgacggcggcggccgcgg 347 |||||||||||||||||||| Sbjct: 205 gtcgacggcggcggccgcgg 224
>dbj|AK073780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068M08, full insert sequence Length = 1270 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 cgacggcggcggccgcggaggagg 353 ||||||||||||| |||||||||| Sbjct: 48 cgacggcggcggcggcggaggagg 25
>dbj|AK072987.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150F21, full insert sequence Length = 1612 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 cgacggcggcggccgcggaggagg 353 ||||||||||||| |||||||||| Sbjct: 74 cgacggcggcggcggcggaggagg 51
>dbj|AK072334.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044C15, full insert sequence Length = 4706 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 cgacggcggcggccgcggaggagg 353 ||||||||||||| |||||||||| Sbjct: 298 cgacggcggcggcggcggaggagg 275
>dbj|AK068907.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002L07, full insert sequence Length = 1791 Score = 40.1 bits (20), Expect = 6.3 Identities = 53/64 (82%) Strand = Plus / Plus Query: 172 tggcggccttaggctgccaccgtgcccgtggaggctgcccatggtgggcaacctgcacca 231 ||||||| | |||||||| || | |||||| ||||||| || | |||||||||||||| Sbjct: 155 tggcggcatgaggctgccgcctgggccgtggcggctgccggtgatcggcaacctgcacca 214 Query: 232 gatc 235 |||| Sbjct: 215 gatc 218
>dbj|AK066831.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075L03, full insert sequence Length = 1161 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 cgacggcggcggccgcggaggagg 353 ||||||||||||| |||||||||| Sbjct: 48 cgacggcggcggcggcggaggagg 25
>dbj|AK066278.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013062H12, full insert sequence Length = 3825 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 cgacggcggcggccgcggaggagg 353 ||||||||||||| |||||||||| Sbjct: 172 cgacggcggcggcggcggaggagg 149
>gb|AC171271.4| Mus musculus chromosome 5, clone RP24-99D19, complete sequence Length = 170255 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 112 actggcctccttcctcctcacccg 135 ||||||| |||||||||||||||| Sbjct: 71688 actggccaccttcctcctcacccg 71665
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 301 gctgggcatggtcccggcggtggtgctg 328 |||||||||| | ||||||||||||||| Sbjct: 3214097 gctgggcatgattccggcggtggtgctg 3214070
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 301 gctgggcatggtcccggcggtggtgctg 328 |||||||||| | ||||||||||||||| Sbjct: 3333176 gctgggcatgattccggcggtggtgctg 3333149
>dbj|AP000781.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-872D17, complete sequence Length = 190251 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 agcaggaacaatggctgctgcttc 51 |||||||| ||||||||||||||| Sbjct: 58496 agcaggaataatggctgctgcttc 58473
>gb|AC084070.57| Mus musculus strain C57BL/6J chromosome 5 clone rp23-268d19, complete sequence Length = 347166 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 112 actggcctccttcctcctcacccg 135 ||||||| |||||||||||||||| Sbjct: 268405 actggccaccttcctcctcacccg 268428
>dbj|D85382.1| Oryza sativa (japonica cultivar-group) DNA for mitochondrial ribosomal protein S11 (nuclear encoded), complete cds Length = 2493 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 cgacggcggcggccgcggaggagg 353 ||||||||||||| |||||||||| Sbjct: 55 cgacggcggcggcggcggaggagg 32
>gb|AC123681.12| Mus musculus chromosome 15, clone RP23-287O20, complete sequence Length = 172148 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 gccatcctcctcctcccact 114 |||||||||||||||||||| Sbjct: 8884 gccatcctcctcctcccact 8903
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 gcggcggccgcggaggaggc 354 |||||||||||||||||||| Sbjct: 7868554 gcggcggccgcggaggaggc 7868535
>gb|L25602.1|MUSBMP2A Mus musculus bone morphogenetic protein 2 (BMP-2) gene, complete cds Length = 11605 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 cccactggcctccttcctcc 128 |||||||||||||||||||| Sbjct: 921 cccactggcctccttcctcc 940
>emb|AL807764.9| Mouse DNA sequence from clone RP23-400F8 on chromosome 4, complete sequence Length = 226637 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 tcctcctcctcccactggcctcct 122 ||||||||||||| |||||||||| Sbjct: 74039 tcctcctcctccctctggcctcct 74016
>gb|M64683.1|STMACTII Streptomyces coelicolor ORF1-4 (actII) gene, complete cds Length = 5900 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cccaccgggacctggcacgg 265 |||||||||||||||||||| Sbjct: 623 cccaccgggacctggcacgg 604
>dbj|AB036344.1| Halobacterium cutirubrum rpl7AE, rps28E, rpl24E, ndk genes for LSU ribosomal protein L7AE, SSU ribosomal protein S28E, LSU ribosomal protein L24E, nucleoside diphosphate kinase, partial and complete cds Length = 1270 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 cgacggcggcggccgcggag 349 |||||||||||||||||||| Sbjct: 202 cgacggcggcggccgcggag 183 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,689,334 Number of Sequences: 3902068 Number of extensions: 4689334 Number of successful extensions: 114455 Number of sequences better than 10.0: 128 Number of HSP's better than 10.0 without gapping: 136 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 111486 Number of HSP's gapped (non-prelim): 2971 length of query: 469 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 447 effective length of database: 17,147,199,772 effective search space: 7664798298084 effective search space used: 7664798298084 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)