>ref|XM_467437.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3793

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 65/71 (91%)
 Strand = Plus / Plus

                                                                       
Query: 168 cgatggagagccccgtgaaggaggaggtcggcggggagctggcgatggagatcgagtcga 227
           ||||||||||||||| |||||||||||  || |||||||||||||||||||||||||| |
Sbjct: 238 cgatggagagccccgcgaaggaggaggcgggaggggagctggcgatggagatcgagtcca 297

                      
Query: 228 gcgtcacggcg 238
            ||||||||||
Sbjct: 298 ccgtcacggcg 308



 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 8   ccccatcatcacatcgcccgcgtgag 33
           ||||| ||||||||||||||||||||
Sbjct: 119 ccccaccatcacatcgcccgcgtgag 144

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 65/71 (91%)
 Strand = Plus / Minus

                                                                            
Query: 168      cgatggagagccccgtgaaggaggaggtcggcggggagctggcgatggagatcgagtcga 227
                ||||||||||||||| |||||||||||  || |||||||||||||||||||||||||| |
Sbjct: 29513959 cgatggagagccccgcgaaggaggaggcgggaggggagctggcgatggagatcgagtcca 29513900

                           
Query: 228      gcgtcacggcg 238
                 ||||||||||
Sbjct: 29513899 ccgtcacggcg 29513889



 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 8        ccccatcatcacatcgcccgcgtgag 33
                ||||| ||||||||||||||||||||
Sbjct: 29514078 ccccaccatcacatcgcccgcgtgag 29514053

>dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1038_A06
          Length = 147836

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 65/71 (91%)
 Strand = Plus / Minus

                                                                          
Query: 168    cgatggagagccccgtgaaggaggaggtcggcggggagctggcgatggagatcgagtcga 227
              ||||||||||||||| |||||||||||  || |||||||||||||||||||||||||| |
Sbjct: 108989 cgatggagagccccgcgaaggaggaggcgggaggggagctggcgatggagatcgagtcca 108930

                         
Query: 228    gcgtcacggcg 238
               ||||||||||
Sbjct: 108929 ccgtcacggcg 108919



 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 8      ccccatcatcacatcgcccgcgtgag 33
              ||||| ||||||||||||||||||||
Sbjct: 109108 ccccaccatcacatcgcccgcgtgag 109083

>dbj|AK065045.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001I02, full
           insert sequence
          Length = 3793

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 65/71 (91%)
 Strand = Plus / Plus

                                                                       
Query: 168 cgatggagagccccgtgaaggaggaggtcggcggggagctggcgatggagatcgagtcga 227
           ||||||||||||||| |||||||||||  || |||||||||||||||||||||||||| |
Sbjct: 238 cgatggagagccccgcgaaggaggaggcgggaggggagctggcgatggagatcgagtcca 297

                      
Query: 228 gcgtcacggcg 238
            ||||||||||
Sbjct: 298 ccgtcacggcg 308



 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 8   ccccatcatcacatcgcccgcgtgag 33
           ||||| ||||||||||||||||||||
Sbjct: 119 ccccaccatcacatcgcccgcgtgag 144

>ref|XM_743362.1| Aspergillus fumigatus Af293 hypothetical protein (Afu3g01340)
           partial mRNA
          Length = 441

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 200 ggggagctggcgatggagatc 220
           |||||||||||||||||||||
Sbjct: 343 ggggagctggcgatggagatc 363

>ref|NM_187895.1| Oryza sativa (japonica cultivar-group), Ozsa8337 predicted mRNA
          Length = 1332

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 190 ggaggtcggcggggagctgg 209
           ||||||||||||||||||||
Sbjct: 45  ggaggtcggcggggagctgg 64

>ref|XM_463372.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1593

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 ggaggaggtcggcggggagc 206
           ||||||||||||||||||||
Sbjct: 604 ggaggaggtcggcggggagc 585

>gb|AC141922.19| Medicago truncatula clone mth2-9n11, complete sequence
          Length = 107448

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 112  ctctaaaccctagcggcatc 131
            ||||||||||||||||||||
Sbjct: 6518 ctctaaaccctagcggcatc 6537

>dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0711E10
          Length = 157903

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 190   ggaggtcggcggggagctgg 209
             ||||||||||||||||||||
Sbjct: 46047 ggaggtcggcggggagctgg 46028

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 187      ggaggaggtcggcggggagc 206
                ||||||||||||||||||||
Sbjct: 23405412 ggaggaggtcggcggggagc 23405393



 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 190     ggaggtcggcggggagctgg 209
               ||||||||||||||||||||
Sbjct: 8470894 ggaggtcggcggggagctgg 8470875

>gb|AE004855.1| Pseudomonas aeruginosa PAO1, section 416 of 529 of the complete
            genome
          Length = 11578

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 195  tcggcggggagctggcgatg 214
            ||||||||||||||||||||
Sbjct: 9444 tcggcggggagctggcgatg 9463

>dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0705D01
          Length = 147174

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 190   ggaggtcggcggggagctgg 209
             ||||||||||||||||||||
Sbjct: 85849 ggaggtcggcggggagctgg 85830

>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1103C09
          Length = 163996

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 187    ggaggaggtcggcggggagc 206
              ||||||||||||||||||||
Sbjct: 131110 ggaggaggtcggcggggagc 131091

>dbj|AK107371.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-B04, full
           insert sequence
          Length = 1894

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 ggaggaggtcggcggggagc 206
           ||||||||||||||||||||
Sbjct: 679 ggaggaggtcggcggggagc 660


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,625,446
Number of Sequences: 3902068
Number of extensions: 1625446
Number of successful extensions: 31399
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 31290
Number of HSP's gapped (non-prelim): 109
length of query: 238
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 216
effective length of database: 17,147,199,772
effective search space: 3703795150752
effective search space used: 3703795150752
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)