>PAX8_RAT (P51974) Paired box protein Pax-8|
          Length = 458

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -3

Query: 276 PAVASDPAPPQRILRQPFLDLVMVGSGGSLAPHLP 172
           P ++S  + P  +    FLDL  VGSGG     +P
Sbjct: 314 PELSSSSSTPSSLSSSAFLDLQQVGSGGPAGASVP 348

>SPC98_YEAST (P53540) Spindle pole body component SPC98|
          Length = 846

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -2

Query: 238 LEAAVLGLGHGRIGW 194
           L+A VL LGHG +GW
Sbjct: 541 LDARVLDLGHGSVGW 555

>Y066_NPVLD (P30325) Hypothetical protein in POL 5'region (Fragment)|
          Length = 369

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 291 VSGSEPAVASDPAPPQRILRQPFLDLVMVGSGGSLA 184
           ++ SEP  AS P+PP+     P    V + S G  A
Sbjct: 120 IAPSEPTPASAPSPPKADAPNPIQQNVYINSAGEAA 155


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,468,326
Number of Sequences: 219361
Number of extensions: 355424
Number of successful extensions: 1177
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1177
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 1349397000
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)