>FCRL_RAT (Q3B8P2) Fc receptor-like and mucin-like 1 precursor|
          Length = 347

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +3

Query: 63  QKPSQGNAPPGARVHGPMPFLSTPS 137
           QKP+    PP A+  GP+P L TPS
Sbjct: 271 QKPATPETPPPAKAPGPLPLLPTPS 295

>CAC1B_RABIT (Q05152) Voltage-dependent N-type calcium channel alpha-1B subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.2)
            (Calcium channel, L type, alpha-1 polypeptide isoform 5)
            (Brain calcium channel III) (BIII)
          Length = 2339

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +2

Query: 35   LAAESG*RAPEAKPRKRTPWSPGPRPHALPL--DALVRPLRRRGTH 166
            LAAE+   AP+A P KR+  +  PRPH   L   AL RP   +  H
Sbjct: 2007 LAAETQ-PAPDASPMKRSISTLAPRPHTARLGSTALDRPAPSQAPH 2051

>DPOLZ_MOUSE (Q61493) DNA polymerase zeta catalytic subunit (EC 2.7.7.7)|
            (Seizure-related protein 4)
          Length = 3122

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +2

Query: 17   QRERDTLAAESG*RAPEAKPRKRTPWSPGPRPHALPLDALVRP 145
            +R + T   + G + P AK ++R       R HA+P D  ++P
Sbjct: 1193 KRNQTTKLVDDGKKKPRAKQKQRANEKSLSRKHAIPADEKMKP 1235

>PRP_PIG (Q95JC9) Basic proline-rich protein precursor [Contains:|
           Proline-rich peptide SP-A (PRP-SP-A); Proline-rich
           peptide SP-B (PRP-SP-B); Parotid hormone (PH-Ab)]
          Length = 676

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = +3

Query: 15  PSESETR*QRNQADEP-QKPSQGNAPPGAR-VHGPMPFLSTPSFDLSAGAEPTLG 173
           P ES+    + +   P   P QG APPGAR   GP P    P      GA P  G
Sbjct: 49  PEESQGEGHQKRPRPPGDGPEQGPAPPGARPPPGPPPPGPPPPGPAPPGARPPPG 103



 Score = 28.1 bits (61), Expect = 5.6
 Identities = 18/39 (46%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = +3

Query: 60  PQKPSQGNAPPGAR-VHGPMPFLSTPSFDLSAGAEPTLG 173
           P  PS G APPGAR   GP P    P      GA P  G
Sbjct: 450 PGPPSPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPPG 488



 Score = 27.7 bits (60), Expect = 7.3
 Identities = 17/39 (43%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
 Frame = +3

Query: 60  PQKPSQGNAPPGAR-VHGPMPFLSTPSFDLSAGAEPTLG 173
           P  P  G APPGAR   GP P    P      GA P  G
Sbjct: 233 PGPPPPGPAPPGARPPPGPPPLGPPPPGPAPPGARPPPG 271

>KINB1_ARATH (Q84VQ1) SNF1-related protein kinase regulatory subunit beta-1|
           (AKIN beta1) (AKINB1)
          Length = 283

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 42  RNQADEPQKPSQGNAPPGARVHGPMPFLSTP 134
           R++   P   S  ++PPG+    P PFL  P
Sbjct: 35  RSRHRRPSSDSMSSSPPGSPARSPSPFLFAP 65

>VP40_SCMVC (P16046) Capsid protein P40 [Contains: Assemblin (EC 3.4.21.97)|
           (Protease); Gene APNG.7 protein; Capsid assembly
           protein; Gene APNG.5 protein; Gene APNG.4 protein;
           C-terminal peptide]
          Length = 589

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 15/53 (28%), Positives = 29/53 (54%)
 Frame = +3

Query: 12  NPSESETR*QRNQADEPQKPSQGNAPPGARVHGPMPFLSTPSFDLSAGAEPTL 170
           +P+E ET   + + + P++P Q + P  +  H PM  ++TP+    A ++  L
Sbjct: 252 SPAEQETCDIKVEKERPKEPEQSHVPTESMSH-PMSAVATPAASTVAPSQAPL 303

>KELL_HUMAN (P23276) Kell blood group glycoprotein (EC 3.4.24.-) (CD238|
           antigen)
          Length = 732

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 60  PQKPSQGNAPPGARVHGPMPFLSTPSF 140
           PQ     ++PP  RVHGP+   STP+F
Sbjct: 687 PQDSHDTHSPPHLRVHGPLS--STPAF 711

>TCR8_PASMU (P51564) Tetracycline resistance protein, class H (TETA(H))|
          Length = 400

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 89  GCVSLAWLLGLVSLIPLLACLALAGV 12
           GC+ LAW+  +  ++P L CLA  G+
Sbjct: 289 GCLLLAWIGHVWVILPALICLAAGGM 314

>EXON_HHV11 (P04294) Alkaline exonuclease (EC 3.1.11.-)|
          Length = 626

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +2

Query: 23  ERDTLAAESG*RAPEAKPRKRTPWSPGPRPHALPLDALVRPL 148
           +R    AE   R P++ P++       PRP++LPL    RPL
Sbjct: 17  KRPWALAEDTPRGPDSPPKR-------PRPNSLPLTTTFRPL 51

>SNTA1_HUMAN (Q13424) Alpha-1-syntrophin (59 kDa dystrophin-associated protein|
           A1, acidic component 1) (Pro-TGF-alpha cytoplasmic
           domain-interacting protein 1) (TACIP1) (Syntrophin 1)
          Length = 505

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +2

Query: 8   LQPQRERDTLAAESG*RAPEAKPRKRTPWSPGPRP 112
           + P  +  T     G  +P A P +R P SPGP P
Sbjct: 172 VSPYFKNSTGGTSVGWDSPPASPLQRQPSSPGPTP 206

>CAC1B_MOUSE (O55017) Voltage-dependent N-type calcium channel alpha-1B subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.2)
            (Calcium channel, L type, alpha-1 polypeptide isoform 5)
            (Brain calcium channel III) (BIII)
          Length = 2327

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +2

Query: 35   LAAESG*RAPEAKPRKRTPWSPGPRPHALPLDALV--RPLRRRGTH 166
            LAAE+   AP A P KR+  +  PRPH   L + V  RP   + +H
Sbjct: 1996 LAAETQ-PAPNASPMKRSISTLAPRPHGTQLCSTVLDRPPPSQASH 2040

>ZIM10_MOUSE (Q6P1E1) Retinoic acid-induced protein 17 (PIAS-like protein|
           Zimp10)
          Length = 1072

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +2

Query: 98  PGPRPHALPLDALVRP 145
           PGPRP +LP+ ++ RP
Sbjct: 397 PGPRPQSLPIQSIKRP 412

>TRI56_HUMAN (Q9BRZ2) Tripartite motif protein 56 (RING finger protein 109)|
          Length = 755

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 5   ILQPQRERDTLAAESG*RAPEAKPRKRTPWSPGPRPHALP 124
           +L   RE + L+ E G  A   +  +  PW+PGP P  LP
Sbjct: 312 VLSLGREAEILSLE-GAIAQRLRQLQGCPWAPGPAPCLLP 350

>SNTA1_MOUSE (Q61234) Alpha-1-syntrophin (59 kDa dystrophin-associated protein|
           A1, acidic component 1) (Syntrophin 1)
          Length = 503

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 59  APEAKPRKRTPWSPGPRPHAL 121
           +P A P +R P SPGP+P  L
Sbjct: 183 SPPASPLQRQPSSPGPQPRNL 203


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.305    0.125    0.362 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,357,252
Number of Sequences: 219361
Number of extensions: 410495
Number of successful extensions: 1263
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1237
length of database: 80,573,946
effective HSP length: 92
effective length of database: 60,392,734
effective search space used: 1449425616
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)