ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl31d08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK101520.1| Oryza sativa (japonica cultivar-group) cDNA clon... 196 4e-47
2gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome... 176 4e-41
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 176 4e-41
4ref|XM_478857.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.097
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.097
6gb|AC126224.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.097
7gb|CP000316.1| Polaromonas sp. JS666, complete genome 46 0.097
8dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.097
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.097
10dbj|AP004182.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.097
11gb|BC080145.1| Xenopus tropicalis PRDM1 protein, mRNA (cDNA clon... 44 0.38
12ref|XM_475299.1| Oryza sativa (japonica cultivar-group), predic... 44 0.38
13ref|XM_472387.1| Oryza sativa (japonica cultivar-group), predic... 44 0.38
14gb|AC119292.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.38
15gb|AC118704.17| Mus musculus chromosome 13, clone RP24-114K21, c... 44 0.38
16emb|AL731639.3|OSJN00288 Oryza sativa genomic DNA, chromosome 4,... 44 0.38
17dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
18dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
19ref|NM_173942.2| Bos taurus cleavage-polyadenylation specificity... 44 0.38
20gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.38
21dbj|AP005594.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
22gb|U96448.1|BTU96448 Bos taurus cleavage and polyadenylation spe... 44 0.38
23ref|NM_187909.1| Oryza sativa (japonica cultivar-group), Ozsa835... 42 1.5
24ref|NM_188268.1| Oryza sativa (japonica cultivar-group), predic... 42 1.5
25gb|CP000110.1| Synechococcus sp. CC9605, complete genome 42 1.5
26gb|AC110566.17| Mus musculus chromosome 5, clone RP23-300A10, co... 42 1.5
27ref|XM_883536.1| Leishmania major strain Friedlin hypothetical p... 42 1.5
28emb|AL139794.3|LMFLCHR4B Leishmania major Friedlin chromosome 4,... 42 1.5
29dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
30dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
31dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
32dbj|AP003200.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
33gb|AC099066.3| Homo sapiens chromosome 1 clone RP11-145A3, compl... 42 1.5
34dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
35dbj|AP004188.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
36dbj|AK103866.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
37dbj|AK063575.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
38ref|XM_466365.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.0
39ref|NM_183883.1| Oryza sativa (japonica cultivar-group), predic... 40 6.0
40ref|XM_526617.1| PREDICTED: Pan troglodytes similar to RE1-silen... 40 6.0
41ref|NM_004473.3| Homo sapiens forkhead box E1 (thyroid transcrip... 40 6.0
42ref|XM_421913.1| PREDICTED: Gallus gallus similar to hypothetica... 40 6.0
43ref|NM_005612.3| Homo sapiens RE1-silencing transcription factor... 40 6.0
44gb|BC070001.1| Danio rerio POU domain gene 12, mRNA (cDNA clone ... 40 6.0
45gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, c... 40 6.0
46gb|BC058318.1| Danio rerio POU domain gene 12, mRNA (cDNA clone ... 40 6.0
47gb|BC044354.1| Danio rerio POU domain gene 12, mRNA (cDNA clone ... 40 6.0
48gb|BC048776.1| Mus musculus inositol monophosphatase domain cont... 40 6.0
49ref|NM_131150.1| Danio rerio POU domain gene 12 (pou12), mRNA 40 6.0
50ref|XM_976817.1| PREDICTED: Mus musculus hypothetical protein LO... 40 6.0
51ref|XM_977027.1| PREDICTED: Mus musculus hypothetical protein LO... 40 6.0
52ref|XM_842584.1| Leishmania major strain Friedlin hypothetical p... 40 6.0
53emb|AL499604.9| Human DNA sequence from clone RP11-23B15 on chro... 40 6.0
54emb|Y13386.1|HSTIF2 Homo sapiens TITF2 gene for thyroid transcri... 40 6.0
55emb|Y07906.1|DRZP12POU D.rerio mRNA for zp-12 POU gene, splice v... 40 6.0
56emb|AL731611.2|OSJN00253 Oryza sativa genomic DNA, chromosome 4,... 40 6.0
57gb|BC065961.1| Danio rerio POU domain gene 12, mRNA (cDNA clone ... 40 6.0
58gb|AC158232.2| Mus musculus BAC clone RP24-200M15 from chromosom... 40 6.0
59gb|AC018529.12| Homo sapiens, clone RP11-4B16, complete sequence 40 6.0
60gb|AC151612.2| Emiliania huxleyi clone JGIACCU-13I1, complete se... 40 6.0
61gb|DQ397840.1| Cenarchaeum symbiosum clone C05D01, complete sequ... 40 6.0
62dbj|AK141959.1| Mus musculus 12 days embryo spinal ganglion cDNA... 40 6.0
63gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 6.0
64emb|BX842683.9| Zebrafish DNA sequence from clone DKEYP-118H3 in... 40 6.0
65dbj|AK052165.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu... 40 6.0
66gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 6.0
67gb|AY378698.1| Nilaparvata lugens clone Nla1 nicotinic acetylcho... 40 6.0
68dbj|AK045511.1| Mus musculus adult male corpora quadrigemina cDN... 40 6.0
69emb|AL731618.3|OSJN00269 Oryza sativa genomic DNA, chromosome 4,... 40 6.0
70ref|NM_177730.2| Mus musculus inositol monophosphatase domain co... 40 6.0
71gb|AC093330.25| Homo sapiens chromosome 18, clone RP11-862L9, co... 40 6.0
72gb|BC038985.1| Homo sapiens, Similar to RE1-silencing transcript... 40 6.0
73dbj|AP003537.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
74dbj|AP004338.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
75dbj|AP005114.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
76emb|AJ332148.1|HSA332148 Homo sapiens genomic sequence surroundi... 40 6.0
77gb|U43898.2|DRU43898 Danio rerio alternatively spliced brn-1.1 p... 40 6.0
78gb|U13879.1|HSU13879 Human neuron-restrictive silencer factor mR... 40 6.0
79gb|AF039952.1|AF039952 Danio rerio type III POU domain protein (... 40 6.0
80gb|U77736.1|DRU77736 Danio rerio class III POU domain protein (t... 40 6.0
81emb|AL772346.5| Mouse DNA sequence from clone RP23-413E7 on chro... 40 6.0
82emb|AL772249.6| Mouse DNA sequence from clone RP23-430H1 on chro... 40 6.0 
>dbj|AK101520.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046K22, full
           insert sequence
          Length = 2513

 Score =  196 bits (99), Expect = 4e-47
 Identities = 191/221 (86%), Gaps = 3/221 (1%)
 Strand = Plus / Plus

                                                                       
Query: 223 cagcaaccgatgattcttccgcgagcacggctgggatgagggacgacgatcgcagcctgt 282
           ||||||| ||||||||| | |||||||||||||||||||||||||| ||||| |||||||
Sbjct: 214 cagcaactgatgattctgctgcgagcacggctgggatgagggacgaggatcgtagcctgt 273

                                                                       
Query: 283 ccggcgagtccttgtcggagtggcggtcctgcgaccagggcgagagcggaagcccttcga 342
           | |||||||| ||||| ||||||||||||||||| ||||  |||||||  ||||||||||
Sbjct: 274 ctggcgagtcgttgtccgagtggcggtcctgcgagcaggtggagagcgagagcccttcga 333

                                                                       
Query: 343 catccccgccattttgggacactgattgcgacgacgatgatcctgcaggccccaaacctt 402
           | |||||||| ||||||||||||||  | || ||||||||||||   |||||||||||||
Sbjct: 334 cgtccccgcccttttgggacactgacggtgatgacgatgatcct---ggccccaaacctt 390

                                                    
Query: 403 cagaattatatggtcggcacacttggaggatcgagaatttt 443
           |||| |||| ||| ||| | |||||||| || || ||||||
Sbjct: 391 cagatttatttgggcggtatacttggagaattgaaaatttt 431



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 23 tacaaatcgcaattccccaatcca 46
          ||||||||||||||||||||||||
Sbjct: 17 tacaaatcgcaattccccaatcca 40
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>gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0108E17, complete sequence
          Length = 139829

 Score =  176 bits (89), Expect = 4e-41
 Identities = 146/165 (88%)
 Strand = Plus / Plus

                                                                         
Query: 223   cagcaaccgatgattcttccgcgagcacggctgggatgagggacgacgatcgcagcctgt 282
             ||||||| ||||||||| | |||||||||||||||||||||||||| ||||| |||||||
Sbjct: 45856 cagcaactgatgattctgctgcgagcacggctgggatgagggacgaggatcgtagcctgt 45915

                                                                         
Query: 283   ccggcgagtccttgtcggagtggcggtcctgcgaccagggcgagagcggaagcccttcga 342
             | |||||||| ||||| ||||||||||||||||| ||||  |||||||  ||||||||||
Sbjct: 45916 ctggcgagtcgttgtccgagtggcggtcctgcgagcaggtggagagcgagagcccttcga 45975

                                                          
Query: 343   catccccgccattttgggacactgattgcgacgacgatgatcctg 387
             | |||||||| ||||||||||||||  | || |||||||||||||
Sbjct: 45976 cgtccccgcccttttgggacactgacggtgatgacgatgatcctg 46020



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                     
Query: 388   caggccccaaaccttcagaattatatggtcggcacacttggaggatcgagaatttt 443
             ||||||||||||||||||| |||| ||| ||| | |||||||| || || ||||||
Sbjct: 47613 caggccccaaaccttcagatttatttgggcggtatacttggagaattgaaaatttt 47668



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 23    tacaaatcgcaattccccaatcca 46
             ||||||||||||||||||||||||
Sbjct: 45205 tacaaatcgcaattccccaatcca 45228
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  176 bits (89), Expect = 4e-41
 Identities = 146/165 (88%)
 Strand = Plus / Plus

                                                                            
Query: 223      cagcaaccgatgattcttccgcgagcacggctgggatgagggacgacgatcgcagcctgt 282
                ||||||| ||||||||| | |||||||||||||||||||||||||| ||||| |||||||
Sbjct: 24977003 cagcaactgatgattctgctgcgagcacggctgggatgagggacgaggatcgtagcctgt 24977062

                                                                            
Query: 283      ccggcgagtccttgtcggagtggcggtcctgcgaccagggcgagagcggaagcccttcga 342
                | |||||||| ||||| ||||||||||||||||| ||||  |||||||  ||||||||||
Sbjct: 24977063 ctggcgagtcgttgtccgagtggcggtcctgcgagcaggtggagagcgagagcccttcga 24977122

                                                             
Query: 343      catccccgccattttgggacactgattgcgacgacgatgatcctg 387
                | |||||||| ||||||||||||||  | || |||||||||||||
Sbjct: 24977123 cgtccccgcccttttgggacactgacggtgatgacgatgatcctg 24977167



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                        
Query: 388      caggccccaaaccttcagaattatatggtcggcacacttggaggatcgagaatttt 443
                ||||||||||||||||||| |||| ||| ||| | |||||||| || || ||||||
Sbjct: 24978760 caggccccaaaccttcagatttatttgggcggtatacttggagaattgaaaatttt 24978815



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 23       tacaaatcgcaattccccaatcca 46
                ||||||||||||||||||||||||
Sbjct: 24976352 tacaaatcgcaattccccaatcca 24976375



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 70       gcctcgcctcgcctcgtcgccgccgc 95
                |||||||||||||||| |||||||||
Sbjct: 21195197 gcctcgcctcgcctcgccgccgccgc 21195222
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>ref|XM_478857.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 360

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 79  cgcctcgtcgccgccgcgccgcagccc 105
           ||||||| |||||||||||||||||||
Sbjct: 163 cgcctcgccgccgccgcgccgcagccc 189
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 79       cgcctcgtcgccgccgcgccgca 101
                |||||||||||||||||||||||
Sbjct: 13400767 cgcctcgtcgccgccgcgccgca 13400789
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>gb|AC126224.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0078O24, complete sequence
          Length = 135980

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 79    cgcctcgtcgccgccgcgccgca 101
             |||||||||||||||||||||||
Sbjct: 97638 cgcctcgtcgccgccgcgccgca 97660
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 146     tgccccgggcggcggctgcggca 168
               |||||||||||||||||||||||
Sbjct: 3780924 tgccccgggcggcggctgcggca 3780946
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 79       cgcctcgtcgccgccgcgccgcagccc 105
                ||||||| |||||||||||||||||||
Sbjct: 23376131 cgcctcgccgccgccgcgccgcagccc 23376157



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 71      cctcgcctcgcctcgtcgcc 90
               ||||||||||||||||||||
Sbjct: 1883565 cctcgcctcgcctcgtcgcc 1883584
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 79       cgcctcgtcgccgccgcgccgca 101
                |||||||||||||||||||||||
Sbjct: 13397542 cgcctcgtcgccgccgcgccgca 13397564
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>dbj|AP004182.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1199_H01
          Length = 107252

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 79    cgcctcgtcgccgccgcgccgcagccc 105
             ||||||| |||||||||||||||||||
Sbjct: 57355 cgcctcgccgccgccgcgccgcagccc 57381
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>gb|BC080145.1| Xenopus tropicalis PRDM1 protein, mRNA (cDNA clone IMAGE:7027443),
            partial cds
          Length = 1800

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 392  ccccaaaccttcagaattatatggtc 417
            |||||||||||||| |||||||||||
Sbjct: 1252 ccccaaaccttcagtattatatggtc 1227
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>ref|XM_475299.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2001

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 70   gcctcgcctcgcctcgtcgccgccgc 95
            |||||||||||||||| |||||||||
Sbjct: 1697 gcctcgcctcgcctcgccgccgccgc 1722
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>ref|XM_472387.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 828

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 147 gccccgggcggcggctgcggca 168
           ||||||||||||||||||||||
Sbjct: 281 gccccgggcggcggctgcggca 260
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>gb|AC119292.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0088F07, complete sequence
          Length = 139180

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 70    gcctcgcctcgcctcgtcgccgccgc 95
             |||||||||||||||| |||||||||
Sbjct: 75980 gcctcgcctcgcctcgccgccgccgc 76005
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>gb|AC118704.17| Mus musculus chromosome 13, clone RP24-114K21, complete sequence
          Length = 197574

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 60     ccctcccgcagcctcgcctcgcctcgtcgccgcc 93
              |||||| ||||||||||| ||||||| |||||||
Sbjct: 180707 ccctccggcagcctcgccgcgcctcgccgccgcc 180740
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>emb|AL731639.3|OSJN00288 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000315_02,
             complete sequence
          Length = 112404

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 147   gccccgggcggcggctgcggca 168
             ||||||||||||||||||||||
Sbjct: 81083 gccccgggcggcggctgcggca 81104
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 147      gccccgggcggcggctgcggca 168
                ||||||||||||||||||||||
Sbjct: 20111178 gccccgggcggcggctgcggca 20111199



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 76       cctcgcctcgtcgccgccgc 95
                ||||||||||||||||||||
Sbjct: 11011857 cctcgcctcgtcgccgccgc 11011838
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 70      gcctcgcctcgcctcgtcgccg 91
               ||||||||||||||||||||||
Sbjct: 5771939 gcctcgcctcgcctcgtcgccg 5771960
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>ref|NM_173942.2| Bos taurus cleavage-polyadenylation specificity factor, 30 kD
          (CPSF4), mRNA
          Length = 1667

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 64 cccgcagcctcgcctcgcctcg 85
          ||||||||||||||||||||||
Sbjct: 38 cccgcagcctcgcctcgcctcg 17
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 309     tcctgcgaccagggcgagagcg 330
               ||||||||||||||||||||||
Sbjct: 3768596 tcctgcgaccagggcgagagcg 3768575



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 81      cctcgtcgccgccgcgccgca 101
               |||||||||||||||||||||
Sbjct: 2887252 cctcgtcgccgccgcgccgca 2887232
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>dbj|AP005594.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0701E06
          Length = 123415

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 70    gcctcgcctcgcctcgtcgccg 91
             ||||||||||||||||||||||
Sbjct: 68144 gcctcgcctcgcctcgtcgccg 68165
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>gb|U96448.1|BTU96448 Bos taurus cleavage and polyadenylation specificity factor 30 kDa
          subunit mRNA, complete cds
          Length = 1667

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 64 cccgcagcctcgcctcgcctcg 85
          ||||||||||||||||||||||
Sbjct: 38 cccgcagcctcgcctcgcctcg 17
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>ref|NM_187909.1| Oryza sativa (japonica cultivar-group), Ozsa8351 predicted mRNA
          Length = 1890

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 65   ccgcagcctcgcctcgcctcg 85
            |||||||||||||||||||||
Sbjct: 1739 ccgcagcctcgcctcgcctcg 1759



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 65   ccgcagcctcgcctcgcctc 84
            ||||||||||||||||||||
Sbjct: 1714 ccgcagcctcgcctcgcctc 1733
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>ref|NM_188268.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 915

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 65  ccgcagcctcgcctcgcctcgtcgc 89
           |||| ||||||||||||||||||||
Sbjct: 826 ccgccgcctcgcctcgcctcgtcgc 850
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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                    
Query: 192     tagctgaggggtttgctgatggccggtgcctcagcaa 228
               ||||||| ||||  |||||||||| ||||||||||||
Sbjct: 1881244 tagctgaagggtgggctgatggcctgtgcctcagcaa 1881208
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>gb|AC110566.17| Mus musculus chromosome 5, clone RP23-300A10, complete sequence
          Length = 175471

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 70     gcctcgcctcgcctcgtcgcc 90
              |||||||||||||||||||||
Sbjct: 104175 gcctcgcctcgcctcgtcgcc 104155
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>ref|XM_883536.1| Leishmania major strain Friedlin hypothetical protein (L1156.06)
            partial mRNA
          Length = 7476

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 152  gggcggcggctgcggcagccgtgga 176
            ||||||||||||| |||||||||||
Sbjct: 6184 gggcggcggctgcagcagccgtgga 6160
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>emb|AL139794.3|LMFLCHR4B Leishmania major Friedlin chromosome 4, right end
          Length = 247462

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 152    gggcggcggctgcggcagccgtgga 176
              ||||||||||||| |||||||||||
Sbjct: 220303 gggcggcggctgcagcagccgtgga 220327
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>dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0711E10
          Length = 157903

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 65     ccgcagcctcgcctcgcctcg 85
              |||||||||||||||||||||
Sbjct: 103298 ccgcagcctcgcctcgcctcg 103278



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 65     ccgcagcctcgcctcgcctc 84
              ||||||||||||||||||||
Sbjct: 103323 ccgcagcctcgcctcgcctc 103304
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 148      ccccgggcggcggctgcggca 168
                |||||||||||||||||||||
Sbjct: 27297848 ccccgggcggcggctgcggca 27297828



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 70       gcctcgcctcgcctcgtcgccgcc 93
                |||||||||||||||| |||||||
Sbjct: 21939964 gcctcgcctcgcctcgccgccgcc 21939987
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 65      ccgcagcctcgcctcgcctcg 85
               |||||||||||||||||||||
Sbjct: 8528145 ccgcagcctcgcctcgcctcg 8528125



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 65      ccgcagcctcgcctcgcctcgtcgc 89
               |||| ||||||||||||||||||||
Sbjct: 5378604 ccgccgcctcgcctcgcctcgtcgc 5378628



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 65       ccgcagcctcgcctcgcctcgtcgccgc 92
                |||| |||||||||||||||| ||||||
Sbjct: 12928700 ccgccgcctcgcctcgcctcgccgccgc 12928673



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 65      ccgcagcctcgcctcgcctc 84
               ||||||||||||||||||||
Sbjct: 8528170 ccgcagcctcgcctcgcctc 8528151
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>dbj|AP003200.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1046G12
          Length = 163533

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 65     ccgcagcctcgcctcgcctcgtcgc 89
              |||| ||||||||||||||||||||
Sbjct: 129948 ccgccgcctcgcctcgcctcgtcgc 129972
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>gb|AC099066.3| Homo sapiens chromosome 1 clone RP11-145A3, complete sequence
          Length = 149549

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 150    ccgggcggcggctgcggcagc 170
              |||||||||||||||||||||
Sbjct: 143668 ccgggcggcggctgcggcagc 143648
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>dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0705D01
          Length = 147174

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 65     ccgcagcctcgcctcgcctcg 85
              |||||||||||||||||||||
Sbjct: 143100 ccgcagcctcgcctcgcctcg 143080



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 65     ccgcagcctcgcctcgcctc 84
              ||||||||||||||||||||
Sbjct: 143125 ccgcagcctcgcctcgcctc 143106
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>dbj|AP004188.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1493_H11
          Length = 106693

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 148   ccccgggcggcggctgcggca 168
             |||||||||||||||||||||
Sbjct: 12781 ccccgggcggcggctgcggca 12761
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>dbj|AK103866.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033149G15, full
           insert sequence
          Length = 3872

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 148 ccccgggcggcggctgcggca 168
           |||||||||||||||||||||
Sbjct: 228 ccccgggcggcggctgcggca 248
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>dbj|AK063575.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-H01, full
           insert sequence
          Length = 460

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 148 ccccgggcggcggctgcggca 168
           |||||||||||||||||||||
Sbjct: 119 ccccgggcggcggctgcggca 139
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>ref|XM_466365.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 558

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 70  gcctcgcctcgcctcgtcgccgcc 93
           |||||||||||||||| |||||||
Sbjct: 277 gcctcgcctcgcctcgccgccgcc 300
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>ref|NM_183883.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 684

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 65  ccgcagcctcgcctcgcctcgtcgccgc 92
           |||| |||||||||||||||| ||||||
Sbjct: 201 ccgccgcctcgcctcgcctcgccgccgc 174
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>ref|XM_526617.1| PREDICTED: Pan troglodytes similar to RE1-silencing transcription
           factor; repressor binding to the X2 box; neuron
           restrictive silencer factor (LOC471235), mRNA
          Length = 4011

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 153 ggcggcggctgcggcagccg 172
           ||||||||||||||||||||
Sbjct: 58  ggcggcggctgcggcagccg 77
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>ref|NM_004473.3| Homo sapiens forkhead box E1 (thyroid transcription factor 2)
            (FOXE1), mRNA
          Length = 3473

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 153  ggcggcggctgcggcagccg 172
            ||||||||||||||||||||
Sbjct: 1173 ggcggcggctgcggcagccg 1154
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>ref|XM_421913.1| PREDICTED: Gallus gallus similar to hypothetical protein FLJ13448
           (LOC424057), mRNA
          Length = 1259

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 86  tcgccgccgcgccgcagccc 105
           ||||||||||||||||||||
Sbjct: 86  tcgccgccgcgccgcagccc 105
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>ref|NM_005612.3| Homo sapiens RE1-silencing transcription factor (REST), mRNA
          Length = 3663

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 153 ggcggcggctgcggcagccg 172
           ||||||||||||||||||||
Sbjct: 123 ggcggcggctgcggcagccg 142
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>gb|BC070001.1| Danio rerio POU domain gene 12, mRNA (cDNA clone MGC:85606
           IMAGE:6963958), complete cds
          Length = 2881

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 153 ggcggcggctgcggcagccg 172
           ||||||||||||||||||||
Sbjct: 873 ggcggcggctgcggcagccg 854
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>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence
          Length = 1212674

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   ggcggcggctgcggcagccg 172
             ||||||||||||||||||||
Sbjct: 59863 ggcggcggctgcggcagccg 59844
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>gb|BC058318.1| Danio rerio POU domain gene 12, mRNA (cDNA clone MGC:65765
           IMAGE:6801552), complete cds
          Length = 2899

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 153 ggcggcggctgcggcagccg 172
           ||||||||||||||||||||
Sbjct: 842 ggcggcggctgcggcagccg 823
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>gb|BC044354.1| Danio rerio POU domain gene 12, mRNA (cDNA clone MGC:55267
           IMAGE:3818319), complete cds
          Length = 2285

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 153 ggcggcggctgcggcagccg 172
           ||||||||||||||||||||
Sbjct: 907 ggcggcggctgcggcagccg 888
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>gb|BC048776.1| Mus musculus inositol monophosphatase domain containing 1, mRNA
           (cDNA clone MGC:54785 IMAGE:6439769), complete cds
          Length = 4638

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 74  cgcctcgcctcgtcgccgccgcgc 97
           |||||| |||||||||||||||||
Sbjct: 445 cgcctcacctcgtcgccgccgcgc 422
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>ref|NM_131150.1| Danio rerio POU domain gene 12 (pou12), mRNA
          Length = 2189

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 153 ggcggcggctgcggcagccg 172
           ||||||||||||||||||||
Sbjct: 827 ggcggcggctgcggcagccg 808
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>ref|XM_976817.1| PREDICTED: Mus musculus hypothetical protein LOC665422 (LOC665422),
           mRNA
          Length = 435

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 70  gcctcgcctcgcctcgtcgc 89
           ||||||||||||||||||||
Sbjct: 230 gcctcgcctcgcctcgtcgc 249
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>ref|XM_977027.1| PREDICTED: Mus musculus hypothetical protein LOC669769 (LOC669769),
           mRNA
          Length = 435

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 70  gcctcgcctcgcctcgtcgc 89
           ||||||||||||||||||||
Sbjct: 230 gcctcgcctcgcctcgtcgc 249
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>ref|XM_842584.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0654)
            partial mRNA
          Length = 1614

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 153  ggcggcggctgcggcagccg 172
            ||||||||||||||||||||
Sbjct: 1287 ggcggcggctgcggcagccg 1306
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>emb|AL499604.9| Human DNA sequence from clone RP11-23B15 on chromosome 9 Contains FOXE1
             gene for forkhead box E1 (thyroid transcription factor 2),
             HEMGN gene for hemogen, 2 novel genes and 5 CpG islands,
             complete sequence
          Length = 160796

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   ggcggcggctgcggcagccg 172
             ||||||||||||||||||||
Sbjct: 72711 ggcggcggctgcggcagccg 72692
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>emb|Y13386.1|HSTIF2 Homo sapiens TITF2 gene for thyroid transcription factor 2
          Length = 1673

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 153 ggcggcggctgcggcagccg 172
           ||||||||||||||||||||
Sbjct: 735 ggcggcggctgcggcagccg 716
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>emb|Y07906.1|DRZP12POU D.rerio mRNA for zp-12 POU gene, splice variant (postsomitogenesis,
           20-28 hpf)
          Length = 2994

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 153 ggcggcggctgcggcagccg 172
           ||||||||||||||||||||
Sbjct: 869 ggcggcggctgcggcagccg 850
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>emb|AL731611.2|OSJN00253 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D08,
             complete sequence
          Length = 142814

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    cctcgcctcgtcgccgccgc 95
             ||||||||||||||||||||
Sbjct: 20512 cctcgcctcgtcgccgccgc 20493
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>gb|BC065961.1| Danio rerio POU domain gene 12, mRNA (cDNA clone MGC:76858
           IMAGE:6969114), complete cds
          Length = 2762

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 153 ggcggcggctgcggcagccg 172
           ||||||||||||||||||||
Sbjct: 867 ggcggcggctgcggcagccg 848
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>gb|AC158232.2| Mus musculus BAC clone RP24-200M15 from chromosome 12, complete
             sequence
          Length = 187225

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 153   ggcggcggctgcggcagccgtgga 176
             ||||||||| ||||||||||||||
Sbjct: 11293 ggcggcggcggcggcagccgtgga 11270
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>gb|AC018529.12| Homo sapiens, clone RP11-4B16, complete sequence
          Length = 185590

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    cccctccctcccgcagcctc 74
             ||||||||||||||||||||
Sbjct: 34889 cccctccctcccgcagcctc 34870
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>gb|AC151612.2| Emiliania huxleyi clone JGIACCU-13I1, complete sequence
          Length = 35427

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 54    tcccctccctcccgcagcctcgcc 77
             ||||||||||||||||||| ||||
Sbjct: 13361 tcccctccctcccgcagccgcgcc 13338
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>gb|DQ397840.1| Cenarchaeum symbiosum clone C05D01, complete sequence
          Length = 37104

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 147   gccccgggcggcggctgcggcagc 170
             ||||||||||||||| ||||||||
Sbjct: 33176 gccccgggcggcggcagcggcagc 33199
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>dbj|AK141959.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN
          full-length enriched library, clone:D130075H07
          product:ral guanine nucleotide dissociation stimulator,
          full insert sequence
          Length = 3569

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 70 gcctcgcctcgcctcgtcgc 89
          ||||||||||||||||||||
Sbjct: 44 gcctcgcctcgcctcgtcgc 25
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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete
              genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 331    gaagcccttcgacatccccg 350
              ||||||||||||||||||||
Sbjct: 142974 gaagcccttcgacatccccg 142993
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>emb|BX842683.9| Zebrafish DNA sequence from clone DKEYP-118H3 in linkage group 9,
             complete sequence
          Length = 160823

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   ggcggcggctgcggcagccg 172
             ||||||||||||||||||||
Sbjct: 89628 ggcggcggctgcggcagccg 89609
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>dbj|AK052165.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
           library, clone:D330002C20 product:hypothetical protein,
           full insert sequence
          Length = 3642

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 74  cgcctcgcctcgtcgccgccgcgc 97
           |||||| |||||||||||||||||
Sbjct: 246 cgcctcacctcgtcgccgccgcgc 269
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>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI,
               complete sequence
          Length = 1813164

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 85      gtcgccgccgcgccgcagcc 104
               ||||||||||||||||||||
Sbjct: 1668014 gtcgccgccgcgccgcagcc 1668033
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>gb|AY378698.1| Nilaparvata lugens clone Nla1 nicotinic acetylcholine receptor alpha
            1 subunit mRNA, complete cds
          Length = 2480

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 153  ggcggcggctgcggcagccg 172
            ||||||||||||||||||||
Sbjct: 1791 ggcggcggctgcggcagccg 1772
to top
>dbj|AK045511.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN
           full-length enriched library, clone:B230207P20
           product:CDNA FLJ20421 FIS, CLONE KAT02467 (MYO-INOSITOL
           MONOPHOSPHATASE A3) homolog [Homo sapiens], full insert
           sequence
          Length = 4672

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 74  cgcctcgcctcgtcgccgccgcgc 97
           |||||| |||||||||||||||||
Sbjct: 495 cgcctcacctcgtcgccgccgcgc 472
to top
>emb|AL731618.3|OSJN00269 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012A12,
              complete sequence
          Length = 122766

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 76     cctcgcctcgtcgccgccgc 95
              ||||||||||||||||||||
Sbjct: 114922 cctcgcctcgtcgccgccgc 114903
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>ref|NM_177730.2| Mus musculus inositol monophosphatase domain containing 1 (Impad1),
           mRNA
          Length = 4638

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 74  cgcctcgcctcgtcgccgccgcgc 97
           |||||| |||||||||||||||||
Sbjct: 445 cgcctcacctcgtcgccgccgcgc 422
to top
>gb|AC093330.25| Homo sapiens chromosome 18, clone RP11-862L9, complete sequence
          Length = 198182

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     cccctccctcccgcagcctc 74
              ||||||||||||||||||||
Sbjct: 171261 cccctccctcccgcagcctc 171242
to top
>gb|BC038985.1| Homo sapiens, Similar to RE1-silencing transcription factor, clone
           IMAGE:5785778, mRNA, partial cds
          Length = 1639

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 153 ggcggcggctgcggcagccg 172
           ||||||||||||||||||||
Sbjct: 52  ggcggcggctgcggcagccg 71
to top
>dbj|AP003537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1140D12
          Length = 139301

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 65    ccgcagcctcgcctcgcctcgtcgccgc 92
             |||| |||||||||||||||| ||||||
Sbjct: 80141 ccgccgcctcgcctcgcctcgccgccgc 80114
to top
>dbj|AP004338.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0507H12
          Length = 143030

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    cctcgcctcgcctcgtcgcc 90
             ||||||||||||||||||||
Sbjct: 88144 cctcgcctcgcctcgtcgcc 88163
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>dbj|AP005114.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0689H05
          Length = 135803

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 70     gcctcgcctcgcctcgtcgccgcc 93
              |||||||||||||||| |||||||
Sbjct: 123249 gcctcgcctcgcctcgccgccgcc 123272
to top
>emb|AJ332148.1|HSA332148 Homo sapiens genomic sequence surrounding NotI site, clone
           NL1-VE21RS
          Length = 849

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 153 ggcggcggctgcggcagccg 172
           ||||||||||||||||||||
Sbjct: 176 ggcggcggctgcggcagccg 195
to top
>gb|U43898.2|DRU43898 Danio rerio alternatively spliced brn-1.1 protein variant (brn-1.1)
           mRNA, partial cds
          Length = 1326

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 153 ggcggcggctgcggcagccg 172
           ||||||||||||||||||||
Sbjct: 261 ggcggcggctgcggcagccg 242
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>gb|U13879.1|HSU13879 Human neuron-restrictive silencer factor mRNA, partial cds
          Length = 2043

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 153 ggcggcggctgcggcagccg 172
           ||||||||||||||||||||
Sbjct: 23  ggcggcggctgcggcagccg 42
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>gb|AF039952.1|AF039952 Danio rerio type III POU domain protein (zp-12) mRNA, complete cds
          Length = 2189

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 153 ggcggcggctgcggcagccg 172
           ||||||||||||||||||||
Sbjct: 827 ggcggcggctgcggcagccg 808
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>gb|U77736.1|DRU77736 Danio rerio class III POU domain protein (taichi) gene, complete
           cds
          Length = 1979

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 153 ggcggcggctgcggcagccg 172
           ||||||||||||||||||||
Sbjct: 369 ggcggcggctgcggcagccg 350
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>emb|AL772346.5| Mouse DNA sequence from clone RP23-413E7 on chromosome 4, complete
              sequence
          Length = 189115

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 74     cgcctcgcctcgtcgccgccgcgc 97
              |||||| |||||||||||||||||
Sbjct: 135761 cgcctcacctcgtcgccgccgcgc 135784
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>emb|AL772249.6| Mouse DNA sequence from clone RP23-430H1 on chromosome 2, complete
              sequence
          Length = 204907

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 70     gcctcgcctcgcctcgtcgc 89
              ||||||||||||||||||||
Sbjct: 151880 gcctcgcctcgcctcgtcgc 151861


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,329,894
Number of Sequences: 3902068
Number of extensions: 3329894
Number of successful extensions: 83554
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81770
Number of HSP's gapped (non-prelim): 1781
length of query: 443
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 421
effective length of database: 17,147,199,772
effective search space: 7218971104012
effective search space used: 7218971104012
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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