ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl31d06 |
|---|---|
| Clone Library Name | barley_pub |
>RPB1_ARATH (P18616) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| Length = 1840 Score = 272 bits (696), Expect = 3e-73 Identities = 132/152 (86%), Positives = 146/152 (96%) Frame = +2 Query: 5 QLGTEITTTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 184 QLGTEI T GD+TWP+PVN+KR IWNAQKTFKIDLR+ SDMHP+EIV+A+DKLQERL VV Sbjct: 962 QLGTEIATNGDSTWPLPVNIKRHIWNAQKTFKIDLRKISDMHPVEIVDAVDKLQERLLVV 1021 Query: 185 PGDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKESFEWVIGEIESRFLQSLVAP 364 PGDDA+S+EAQKNATLFFNILLRST ASKRVL+EY+L++E+FEWVIGEIESRFLQSLVAP Sbjct: 1022 PGDDALSVEAQKNATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAP 1081 Query: 365 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK Sbjct: 1082 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 1113
>RPB1_MOUSE (P08775) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| (RPB1) Length = 1970 Score = 187 bits (475), Expect = 1e-47 Identities = 88/147 (59%), Positives = 119/147 (80%) Frame = +2 Query: 20 ITTTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVVPGDDA 199 I TGD+ +P NL R+IWNAQK F I+ R PSD+HP+++VE + +L ++L +V GDD Sbjct: 969 IFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKLVIVNGDDP 1028 Query: 200 MSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKESFEWVIGEIESRFLQSLVAPGEMIG 379 +S +AQ+NATL FNI LRST S+R+ +E+RL+ E+F+W++GEIES+F Q++ PGEM+G Sbjct: 1029 LSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVG 1088 Query: 380 CVAAQSIGEPATQMTLNTFHYAGVSAK 460 +AAQS+GEPATQMTLNTFHYAGVSAK Sbjct: 1089 ALAAQSLGEPATQMTLNTFHYAGVSAK 1115
>RPB1_HUMAN (P24928) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| (RPB1) Length = 1970 Score = 187 bits (475), Expect = 1e-47 Identities = 88/147 (59%), Positives = 119/147 (80%) Frame = +2 Query: 20 ITTTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVVPGDDA 199 I TGD+ +P NL R+IWNAQK F I+ R PSD+HP+++VE + +L ++L +V GDD Sbjct: 969 IFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKLVIVNGDDP 1028 Query: 200 MSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKESFEWVIGEIESRFLQSLVAPGEMIG 379 +S +AQ+NATL FNI LRST S+R+ +E+RL+ E+F+W++GEIES+F Q++ PGEM+G Sbjct: 1029 LSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVG 1088 Query: 380 CVAAQSIGEPATQMTLNTFHYAGVSAK 460 +AAQS+GEPATQMTLNTFHYAGVSAK Sbjct: 1089 ALAAQSLGEPATQMTLNTFHYAGVSAK 1115
>RPB1_DICDI (P35084) DNA-directed RNA polymerase II largest subunit (EC| 2.7.7.6) (Fragment) Length = 902 Score = 183 bits (465), Expect = 2e-46 Identities = 95/160 (59%), Positives = 118/160 (73%), Gaps = 9/160 (5%) Frame = +2 Query: 8 LGTEITTTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVVP 187 L EI +G+ WP+PVNL+RLI NAQK F ID+RR SD++P +V I+KL RLK++ Sbjct: 127 LRNEIIPSGEANWPLPVNLRRLINNAQKLFNIDIRRVSDLNPAVVVLEIEKLVARLKIIA 186 Query: 188 GDDAMS---------IEAQKNATLFFNILLRSTFASKRVLKEYRLTKESFEWVIGEIESR 340 D E NAT+ F+IL+RSTFASKRVL E+RLT+++F WV GEIES+ Sbjct: 187 TADTTEDDENFNRAWAEVYFNATMLFSILVRSTFASKRVLTEFRLTEKAFLWVCGEIESK 246 Query: 341 FLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 FLQ+L PGEM+G +AAQSIGEPATQMTLNTFHYAGVS+K Sbjct: 247 FLQALAHPGEMVGALAAQSIGEPATQMTLNTFHYAGVSSK 286
>RPB1_SCHPO (P36594) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| (RNA polymerase II subunit 1) Length = 1752 Score = 176 bits (446), Expect = 3e-44 Identities = 80/143 (55%), Positives = 113/143 (79%) Frame = +2 Query: 32 GDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVVPGDDAMSIE 211 GD WP+PVN++R+I NA + F ++ ++P+D+ P +I+ +++L +L + G D ++ + Sbjct: 953 GDARWPLPVNVQRIIQNALQIFHLEAKKPTDLLPSDIINGLNELIAKLTIFRGSDRITRD 1012 Query: 212 AQKNATLFFNILLRSTFASKRVLKEYRLTKESFEWVIGEIESRFLQSLVAPGEMIGCVAA 391 Q NATL F ILLRS FA KRV+ EYRL K +FEW++GE+E+RF Q++V+PGEM+G +AA Sbjct: 1013 VQNNATLLFQILLRSKFAVKRVIMEYRLNKVAFEWIMGEVEARFQQAVVSPGEMVGTLAA 1072 Query: 392 QSIGEPATQMTLNTFHYAGVSAK 460 QSIGEPATQMTLNTFHYAGVS+K Sbjct: 1073 QSIGEPATQMTLNTFHYAGVSSK 1095
>RPB1_CAEEL (P16356) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| Length = 1852 Score = 176 bits (445), Expect = 3e-44 Identities = 82/148 (55%), Positives = 113/148 (76%) Frame = +2 Query: 17 EITTTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVVPGDD 196 +I GD +P NL+RLIWNAQK FK+DLR+P ++ P+ ++ + +L ++L +V G+D Sbjct: 958 KIFPRGDAKIVLPCNLQRLIWNAQKIFKVDLRKPVNLSPLHVISGVRELSKKLIIVSGND 1017 Query: 197 AMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKESFEWVIGEIESRFLQSLVAPGEMI 376 +S +AQ NATL NILLRST +K + + +L E+F+W++GEIESRF Q++ PGEM+ Sbjct: 1018 EISKQAQYNATLLMNILLRSTLCTKNMCTKSKLNSEAFDWLLGEIESRFQQAIAQPGEMV 1077 Query: 377 GCVAAQSIGEPATQMTLNTFHYAGVSAK 460 G +AAQS+GEPATQMTLNTFHYAGVSAK Sbjct: 1078 GALAAQSLGEPATQMTLNTFHYAGVSAK 1105
>RPB1_CAEBR (P35074) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| Length = 1853 Score = 174 bits (442), Expect = 8e-44 Identities = 81/148 (54%), Positives = 113/148 (76%) Frame = +2 Query: 17 EITTTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVVPGDD 196 +I GD +P NL+RLIWNAQK FK+DLR+P ++ P+ ++ + +L ++L +V G+D Sbjct: 962 KIFPRGDAKIVLPCNLQRLIWNAQKIFKVDLRKPVNLSPLHVINGVRELSKKLIIVSGND 1021 Query: 197 AMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKESFEWVIGEIESRFLQSLVAPGEMI 376 +S +AQ NATL NILLRST +K++ +L E+F+W++GEIE+RF Q++ PGEM+ Sbjct: 1022 EISKQAQYNATLLMNILLRSTLCTKKMCTSAKLNTEAFDWLLGEIETRFQQAIAQPGEMV 1081 Query: 377 GCVAAQSIGEPATQMTLNTFHYAGVSAK 460 G +AAQS+GEPATQMTLNTFHYAGVSAK Sbjct: 1082 GALAAQSLGEPATQMTLNTFHYAGVSAK 1109
>RPB1_ASHGO (Q75A34) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| (RNA polymerase II subunit 1) Length = 1745 Score = 174 bits (442), Expect = 8e-44 Identities = 82/148 (55%), Positives = 116/148 (78%) Frame = +2 Query: 17 EITTTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVVPGDD 196 +I G++ WP+PVN++R+I NAQ+TF+ID +P+D+ ++V+ + LQERL V+ G Sbjct: 945 KIFMDGEHNWPLPVNIRRIIQNAQQTFRIDSTKPTDLSIQDVVQGVRGLQERLLVLRGKS 1004 Query: 197 AMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKESFEWVIGEIESRFLQSLVAPGEMI 376 + EAQ+NA F LLRS A++RV+ EYRLTK++FEWV+ IE++FL+S+V PGEM+ Sbjct: 1005 QILQEAQENAITLFCCLLRSRLATRRVITEYRLTKQTFEWVLNNIEAQFLRSIVHPGEMV 1064 Query: 377 GCVAAQSIGEPATQMTLNTFHYAGVSAK 460 G +AAQSIGEPATQMTLNTFH+AGV++K Sbjct: 1065 GVLAAQSIGEPATQMTLNTFHFAGVASK 1092
>RPB1_YEAST (P04050) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| (RNA polymerase II subunit 1) (B220) Length = 1733 Score = 168 bits (426), Expect = 6e-42 Identities = 81/148 (54%), Positives = 113/148 (76%) Frame = +2 Query: 17 EITTTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVVPGDD 196 E+ G+ WP+PVN++R+I NAQ+TF ID +PSD+ +IV + LQE L V+ G + Sbjct: 945 EVFVDGEANWPLPVNIRRIIQNAQQTFHIDHTKPSDLTIKDIVLGVKDLQENLLVLRGKN 1004 Query: 197 AMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKESFEWVIGEIESRFLQSLVAPGEMI 376 + AQ++A F LLRS A++RVL+EYRLTK++F+WV+ IE++FL+S+V PGEM+ Sbjct: 1005 EIIQNAQRDAVTLFCCLLRSRLATRRVLQEYRLTKQAFDWVLSNIEAQFLRSVVHPGEMV 1064 Query: 377 GCVAAQSIGEPATQMTLNTFHYAGVSAK 460 G +AAQSIGEPATQMTLNTFH+AGV++K Sbjct: 1065 GVLAAQSIGEPATQMTLNTFHFAGVASK 1092
>RPB1_DROME (P04052) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| Length = 1887 Score = 167 bits (422), Expect = 2e-41 Identities = 77/148 (52%), Positives = 111/148 (75%) Frame = +2 Query: 17 EITTTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVVPGDD 196 +I G++ +P NL+R+IWN QK F I+ R P+D+ P+ +++ + L ER +V G+D Sbjct: 960 QIFPNGESKVVLPCNLQRMIWNVQKIFHINKRLPTDLSPIRVIKGVKTLLERCVIVTGND 1019 Query: 197 AMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKESFEWVIGEIESRFLQSLVAPGEMI 376 +S +A +NATL F L+RST +K V +E+RL+ E+FEW++GEIE+RF Q+ PGEM+ Sbjct: 1020 RISKQANENATLLFQCLIRSTLCTKYVSEEFRLSTEAFEWLVGEIETRFQQAQANPGEMV 1079 Query: 377 GCVAAQSIGEPATQMTLNTFHYAGVSAK 460 G +AAQS+GEPATQMTLNTFH+AGVS+K Sbjct: 1080 GALAAQSLGEPATQMTLNTFHFAGVSSK 1107
>RPB2_TRYBB (P17546) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| Length = 1766 Score = 119 bits (299), Expect = 3e-27 Identities = 71/147 (48%), Positives = 97/147 (65%), Gaps = 10/147 (6%) Frame = +2 Query: 50 MPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERL-KVVP-----GD----DA 199 +PVN RLI NA+ T + S++ P+ I++ + KLQE L K+ P GD + Sbjct: 968 LPVNPGRLIQNARSTMG-KRSQVSNLSPITIIDHVRKLQEDLMKLFPSYHRGGDGYIRNT 1026 Query: 200 MSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKESFEWVIGEIESRFLQSLVAPGEMIG 379 +S E ++A FN+ LR ASKRVLKEY+L +FE+++ EI +++ QSL PGE IG Sbjct: 1027 LSRERIESALTLFNVHLRQLLASKRVLKEYKLNDRAFEYLLKEIRTKYHQSLTTPGENIG 1086 Query: 380 CVAAQSIGEPATQMTLNTFHYAGVSAK 460 +AAQS GEPATQMTLNTFH AG+S+K Sbjct: 1087 AIAAQSCGEPATQMTLNTFHNAGISSK 1113
>RPB1_TRYBB (P17545) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| Length = 1766 Score = 119 bits (299), Expect = 3e-27 Identities = 71/147 (48%), Positives = 97/147 (65%), Gaps = 10/147 (6%) Frame = +2 Query: 50 MPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERL-KVVP-----GD----DA 199 +PVN RLI NA+ T + S++ P+ I++ + KLQE L K+ P GD + Sbjct: 968 LPVNPGRLIQNARSTMG-KRSQVSNLSPITIIDHVRKLQEDLMKLFPSYHRGGDGYIRNT 1026 Query: 200 MSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKESFEWVIGEIESRFLQSLVAPGEMIG 379 +S E ++A FN+ LR ASKRVLKEY+L +FE+++ EI +++ QSL PGE IG Sbjct: 1027 LSRERIESALTLFNVHLRQLLASKRVLKEYKLNDRAFEYLLKEIRTKYHQSLTTPGENIG 1086 Query: 380 CVAAQSIGEPATQMTLNTFHYAGVSAK 460 +AAQS GEPATQMTLNTFH AG+S+K Sbjct: 1087 AIAAQSCGEPATQMTLNTFHNAGISSK 1113
>RPB1_PLAFD (P14248) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| Length = 2452 Score = 106 bits (265), Expect = 3e-23 Identities = 53/126 (42%), Positives = 83/126 (65%), Gaps = 3/126 (2%) Frame = +2 Query: 92 TFKIDLRRPSDMHPMEIVEAIDKLQERL---KVVPGDDAMSIEAQKNATLFFNILLRSTF 262 T K + S ++P+++V ++ E+L K + +D +S+EAQ NAT+ LR+ Sbjct: 1308 TLKNNYDENSMLNPIDVVHKVNNFLEKLVIIKQINSNDTLSVEAQNNATILLKAHLRTYL 1367 Query: 263 ASKRVLKEYRLTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 442 SK + + ++++ + +W++ EIE F +SL PGE +G +AAQSIGEPATQMTLNTFH+ Sbjct: 1368 NSKLLTQTHKVSVKGLDWLLQEIEKIFYKSLCHPGECVGALAAQSIGEPATQMTLNTFHF 1427 Query: 443 AGVSAK 460 AGV +K Sbjct: 1428 AGVGSK 1433
>RPB1_ENCCU (Q8SSC4) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| (RNA polymerase II subunit 1) Length = 1599 Score = 97.1 bits (240), Expect = 2e-20 Identities = 52/135 (38%), Positives = 80/135 (59%) Frame = +2 Query: 53 PVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVVPGDDAMSIEAQKNATL 232 P N R++ A++TF + D+ P I+EA L +++ Sbjct: 963 PCNFTRILATAKRTFHLST---GDVSPYYILEAHKHLTTSNRIL---------------- 1003 Query: 233 FFNILLRSTFASKRVLKEYRLTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPA 412 N+L+R+ + KRVL E+RL E+F WV+ I+++ L++ + P EM+G +AAQS+GEPA Sbjct: 1004 --NVLIRTNLSVKRVLLEHRLNTEAFNWVVEVIDAKILKAKITPNEMVGTLAAQSVGEPA 1061 Query: 413 TQMTLNTFHYAGVSA 457 TQMTLNTFH AGV++ Sbjct: 1062 TQMTLNTFHLAGVAS 1076
>RPOA2_PYRFU (Q8U0M5) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)| Length = 397 Score = 77.8 bits (190), Expect = 1e-14 Identities = 40/84 (47%), Positives = 56/84 (66%) Frame = +2 Query: 203 SIEAQKNATLFFNILLRSTFASKRVLKEYRLTKESFEWVIGEIESRFLQSLVAPGEMIGC 382 S+ +K A L N+ K+ ++Y+LTK E +I ++ + ++LV PGE +G Sbjct: 9 SLIEKKGANLPENVKSELYEKLKKYNEKYKLTKAEIEAIIDDVVKEYERALVEPGEPVGT 68 Query: 383 VAAQSIGEPATQMTLNTFHYAGVS 454 VAAQSIGEP+TQMTLNTFHYAGV+ Sbjct: 69 VAAQSIGEPSTQMTLNTFHYAGVA 92
>RPOA2_PYRAB (Q9V113) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)| Length = 397 Score = 76.6 bits (187), Expect = 3e-14 Identities = 35/58 (60%), Positives = 46/58 (79%) Frame = +2 Query: 281 KEYRLTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 ++Y+LTK E +I E+ + ++LV PGE +G VAAQSIGEP+TQMTLNTFHYAGV+ Sbjct: 35 EKYKLTKAEVETIIDEVVKEYERALVEPGEAVGTVAAQSIGEPSTQMTLNTFHYAGVA 92
>RPOA2_PYRHO (O93777) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)| Length = 397 Score = 75.5 bits (184), Expect = 6e-14 Identities = 34/58 (58%), Positives = 46/58 (79%) Frame = +2 Query: 281 KEYRLTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 ++Y+LTK E +I E+ + ++L+ PGE +G VAAQSIGEP+TQMTLNTFHYAGV+ Sbjct: 35 EKYKLTKVEVETIIDEVIKEYEKALIEPGEAVGTVAAQSIGEPSTQMTLNTFHYAGVA 92
>RPOA2_THECE (P29158) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)| Length = 393 Score = 73.2 bits (178), Expect = 3e-13 Identities = 34/58 (58%), Positives = 44/58 (75%) Frame = +2 Query: 281 KEYRLTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 K+Y+L K + +I E + ++L+ PGE IG VAAQSIGEP+TQMTLNTFHYAGV+ Sbjct: 33 KKYKLKKAEVQAIIDETVKEYQKALIEPGEAIGTVAAQSIGEPSTQMTLNTFHYAGVA 90
>RPOA2_PYRKO (Q5JE34) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)| Length = 391 Score = 72.4 bits (176), Expect = 5e-13 Identities = 32/58 (55%), Positives = 45/58 (77%) Frame = +2 Query: 281 KEYRLTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 ++Y+L K+ + +I E + ++L+ PGE +G VAAQSIGEP+TQMTLNTFHYAGV+ Sbjct: 33 EKYKLKKDEIQAIIDETVREYQKALIEPGEAVGTVAAQSIGEPSTQMTLNTFHYAGVA 90
>RPOA2_AERPE (Q9YAU2) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)| Length = 410 Score = 65.5 bits (158), Expect = 7e-11 Identities = 34/59 (57%), Positives = 41/59 (69%) Frame = +2 Query: 275 VLKEYRLTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 V KE L++E V+ E +L+SL PGE +G VAAQSIGEP TQMTL TFHYAG+ Sbjct: 33 VEKEDGLSEEDKISVVKETIRTYLRSLAQPGEAVGTVAAQSIGEPGTQMTLRTFHYAGI 91
>RPA1_SCHPO (P15398) DNA-directed RNA polymerase I 190 kDa polypeptide (EC| 2.7.7.6) Length = 1689 Score = 64.3 bits (155), Expect = 1e-10 Identities = 29/44 (65%), Positives = 37/44 (84%) Frame = +2 Query: 329 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 ++ R+ QSLV PGE +G +A+QSIGEP+TQMTLNTFH+AG AK Sbjct: 1179 MQLRYQQSLVDPGESVGVLASQSIGEPSTQMTLNTFHFAGFGAK 1222
>RPA1_DROME (P91875) DNA-directed RNA polymerase I largest subunit (EC 2.7.7.6)| Length = 1642 Score = 64.3 bits (155), Expect = 1e-10 Identities = 30/62 (48%), Positives = 46/62 (74%), Gaps = 1/62 (1%) Frame = +2 Query: 266 SKRVLKEYRLTKESFEWVIGEI-ESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 442 +++++ +Y K + + I +I + ++SL APGE +G +AAQSIGEP+TQMTLNTFH+ Sbjct: 1141 TRKLITDYAKRKPALKETIADIMRVKTIKSLAAPGEPVGLIAAQSIGEPSTQMTLNTFHF 1200 Query: 443 AG 448 AG Sbjct: 1201 AG 1202
>RPOA2_SULAC (P11514) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)| (Subunit C) Length = 393 Score = 62.8 bits (151), Expect = 4e-10 Identities = 29/53 (54%), Positives = 37/53 (69%) Frame = +2 Query: 293 LTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 LT+E + +I + QSL+ PGE IG V AQS+GEP TQMTL TFH+AG+ Sbjct: 41 LTEEDIDRIIDLTIREYQQSLIEPGEAIGVVTAQSVGEPGTQMTLRTFHFAGI 93
>RPOA2_SULSO (P58192) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)| Length = 392 Score = 62.8 bits (151), Expect = 4e-10 Identities = 28/57 (49%), Positives = 39/57 (68%) Frame = +2 Query: 281 KEYRLTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 KE +T++ + + + + L+APGE IG VAAQS+GEP TQMTL TFH+AG+ Sbjct: 36 KEIIVTRDEIDKIFDLAIKEYSEGLIAPGEAIGIVAAQSVGEPGTQMTLRTFHFAGI 92
>RPOA2_ARCFU (O28390) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)| Length = 380 Score = 62.4 bits (150), Expect = 6e-10 Identities = 31/62 (50%), Positives = 42/62 (67%) Frame = +2 Query: 269 KRVLKEYRLTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG 448 K L+++ L K + V+ + +L +L+ PGE G VAAQSIGEP TQMT+ TFHYAG Sbjct: 24 KAELEKHGLKKTEAKKVVEKCFQAYLANLMEPGEAAGIVAAQSIGEPGTQMTMRTFHYAG 83 Query: 449 VS 454 V+ Sbjct: 84 VA 85
>RPOA2_METVA (P14247) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)| Length = 386 Score = 62.4 bits (150), Expect = 6e-10 Identities = 29/63 (46%), Positives = 44/63 (69%) Frame = +2 Query: 266 SKRVLKEYRLTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYA 445 S+++LKE + + +I E + ++++ PGE +G +AAQSIGEP TQMT+ TFHYA Sbjct: 24 SEKILKENINEEYIVDEIIQETIRAYSRTVIEPGEAVGVIAAQSIGEPGTQMTMRTFHYA 83 Query: 446 GVS 454 GV+ Sbjct: 84 GVA 86
>RPOA2_HALMO (P15353) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)| (Subunit C) Length = 393 Score = 61.6 bits (148), Expect = 1e-09 Identities = 29/54 (53%), Positives = 39/54 (72%) Frame = +2 Query: 293 LTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 +T E + +ESR+L + V P + +G V+AQSIGEP TQMT+NTFHYAGV+ Sbjct: 34 VTDEQAVSIAEAVESRYLDTRVEPLDPVGTVSAQSIGEPGTQMTMNTFHYAGVA 87
>RPOA2_METTH (O27126) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)| Length = 451 Score = 61.6 bits (148), Expect = 1e-09 Identities = 38/116 (32%), Positives = 64/116 (55%), Gaps = 10/116 (8%) Frame = +2 Query: 137 EIVEAIDKLQERLKVVPGDDAM-SIEAQKNATLFFNILL---RSTFASK------RVLKE 286 E+V ++ ER + + D+ + ++E L L+ R+ F K V+K+ Sbjct: 43 EMVRLFSRIAERNQGLDDDELLDAVEDDYQRILKVQELVKRKRARFPPKLIEDIAEVMKK 102 Query: 287 YRLTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 + L+ + + +I + + ++ V GE +G VAAQS+GEP TQMT+ TFHYAGV+ Sbjct: 103 HELSDDELDELIRRVRRAYDRARVEAGEAVGTVAAQSVGEPGTQMTMRTFHYAGVA 158
>RPO1_MIMIV (Q7T6X5) DNA-directed RNA polymerase subunit 1 (EC 2.7.7.6)| Length = 1495 Score = 61.2 bits (147), Expect = 1e-09 Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 6/142 (4%) Frame = +2 Query: 41 TWPMPVNLKRLIWNAQKTFKIDLRRPSDM-HPMEIVEAIDKL-----QERLKVVPGDDAM 202 T+ MPV++++ I+N D+R + + P +++ I + + +K + Sbjct: 950 TYKMPVDIQQFIFNI---INRDVRNNNVVVDPYYVLKMIKDMYYGSDSKIMKYNNRTSRI 1006 Query: 203 SIEAQKNATLFFNILLRSTFASKRVLKEYRLTKESFEWVIGEIESRFLQSLVAPGEMIGC 382 E +K I L A K+ Y+ +K+ F+ ++ + + + V GEM+G Sbjct: 1007 KKEDEKRIKFLMKIYLYDVLAPKKCTHVYKFSKQEFDEIVDYFKKTIMLAKVEGGEMVGF 1066 Query: 383 VAAQSIGEPATQMTLNTFHYAG 448 VAAQSIGEP TQ L +FH +G Sbjct: 1067 VAAQSIGEPVTQTNLKSFHKSG 1088
>RPOA2_HALSA (P15354) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)| (Subunit C) Length = 396 Score = 60.5 bits (145), Expect = 2e-09 Identities = 28/58 (48%), Positives = 41/58 (70%) Frame = +2 Query: 281 KEYRLTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 +E +TK + +E+++L + V P + +G V+AQSIGEP TQMT+NTFHYAGV+ Sbjct: 31 EERGVTKSQANEIATAVEAQYLDTRVDPLDPVGTVSAQSIGEPGTQMTMNTFHYAGVA 88
>RPA1_YEAST (P10964) DNA-directed RNA polymerase I 190 kDa polypeptide (EC| 2.7.7.6) (A190) Length = 1664 Score = 60.5 bits (145), Expect = 2e-09 Identities = 24/43 (55%), Positives = 37/43 (86%) Frame = +2 Query: 329 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 ++ ++++SL+ PGE +G +A+QS+GEP+TQMTLNTFH+AG A Sbjct: 1170 MQLKYMRSLINPGEAVGIIASQSVGEPSTQMTLNTFHFAGHGA 1212
>RPOA2_SULTO (Q976A6) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)| Length = 392 Score = 60.1 bits (144), Expect = 3e-09 Identities = 27/56 (48%), Positives = 38/56 (67%) Frame = +2 Query: 284 EYRLTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 + LT+ + +I + +SL+ PGE +G V+AQSIGEP TQMTL TFH+AG+ Sbjct: 37 DINLTESDVDKIIDLAVKDYQESLIEPGEAVGIVSAQSIGEPGTQMTLRTFHFAGI 92
>RPA1_HUMAN (O95602) DNA-directed RNA polymerase I largest subunit (EC 2.7.7.6)| (RNA polymerase I 194 kDa subunit) (RPA194) Length = 1717 Score = 59.7 bits (143), Expect = 4e-09 Identities = 28/56 (50%), Positives = 41/56 (73%) Frame = +2 Query: 281 KEYRLTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG 448 K Y ++ S + + ++ ++ +SL PGE +G +AAQSIGEP+TQMTLNTFH+AG Sbjct: 1181 KSYEKSELSLDRLRTLLQLKWQRSLCEPGEAVGLLAAQSIGEPSTQMTLNTFHFAG 1236
>RPC1_SCHPO (O94666) DNA-directed RNA polymerase III largest subunit (EC 2.7.7.6)| Length = 1405 Score = 59.3 bits (142), Expect = 5e-09 Identities = 27/64 (42%), Positives = 41/64 (64%) Frame = +2 Query: 269 KRVLKEYRLTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG 448 K V R+T++ + +++++ V PG +G + AQSIGEP TQMTL TFH+AG Sbjct: 1012 KSVENIIRVTEKQLRSFVDRCWEKYMRAKVEPGTAVGAIGAQSIGEPGTQMTLKTFHFAG 1071 Query: 449 VSAK 460 V+A+ Sbjct: 1072 VAAQ 1075
>RPOA2_METTW (P09847) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)| (Subunit C) Length = 449 Score = 59.3 bits (142), Expect = 5e-09 Identities = 25/59 (42%), Positives = 41/59 (69%) Frame = +2 Query: 278 LKEYRLTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 +K + L+ + + ++ + + +++V GE +G VAAQS+GEP TQMT+ TFHYAGV+ Sbjct: 100 IKRHGLSDDELDELVRGVRRAYERAMVEAGEAVGTVAAQSVGEPGTQMTMRTFHYAGVA 158
>RPA1_MOUSE (O35134) DNA-directed RNA polymerase I largest subunit (EC 2.7.7.6)| (RNA polymerase I 194 kDa subunit) (RPA194) Length = 1717 Score = 58.9 bits (141), Expect = 6e-09 Identities = 27/56 (48%), Positives = 42/56 (75%) Frame = +2 Query: 281 KEYRLTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG 448 + Y+ ++ S + + ++ ++ +SL PGE +G +AAQSIGEP+TQMTLNTFH+AG Sbjct: 1187 RSYKKSELSLDRLRTLLQLKWQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAG 1242
>RPA1_RAT (O54889) DNA-directed RNA polymerase I largest subunit (EC 2.7.7.6)| (RNA polymerase I 194 kDa subunit) (RPA194) Length = 1716 Score = 57.4 bits (137), Expect = 2e-08 Identities = 25/40 (62%), Positives = 34/40 (85%) Frame = +2 Query: 329 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG 448 ++ ++ +SL PGE +G +AAQSIGEP+TQMTLNTFH+AG Sbjct: 1203 LQLKWQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAG 1242
>RPC1_TRYBB (P08968) DNA-directed RNA polymerase III largest subunit (EC 2.7.7.6)| Length = 1530 Score = 57.0 bits (136), Expect = 2e-08 Identities = 26/55 (47%), Positives = 37/55 (67%) Frame = +2 Query: 293 LTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 LT+ I + S++L+ PG G +AAQS+GEP+TQMTL TFH+AGV++ Sbjct: 1118 LTRGMVTRFIAQCASKYLRKACEPGTPCGAIAAQSVGEPSTQMTLRTFHFAGVAS 1172
>RPOA2_METMA (Q8PUR2) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)| Length = 408 Score = 57.0 bits (136), Expect = 2e-08 Identities = 26/54 (48%), Positives = 36/54 (66%) Frame = +2 Query: 293 LTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 ++K+ E +I + + S + P + G VAAQSIGEP TQMT+ TFHYAGV+ Sbjct: 35 VSKKEMEEIIERVMEEYTVSCIEPCDAAGVVAAQSIGEPGTQMTMRTFHYAGVA 88
>RPOA2_METAC (Q8TRB8) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)| Length = 397 Score = 57.0 bits (136), Expect = 2e-08 Identities = 26/54 (48%), Positives = 37/54 (68%) Frame = +2 Query: 293 LTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 ++K+ E +I ++ + S + P + G VAAQSIGEP TQMT+ TFHYAGV+ Sbjct: 32 VSKKEMEEIIEKMMEEYATSCIEPCDAAGVVAAQSIGEPGTQMTMRTFHYAGVA 85
>RPC1_PLAFA (P27625) DNA-directed RNA polymerase III largest subunit (EC 2.7.7.6)| Length = 2339 Score = 56.2 bits (134), Expect = 4e-08 Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 2/87 (2%) Frame = +2 Query: 203 SIEAQKNATLFFNILLRSTFASKRVLKEYRLT--KESFEWVIGEIESRFLQSLVAPGEMI 376 SIE K F I+ + + ++ +Y K+ + ++ I ++ + + PG+ + Sbjct: 1725 SIELIKKKDYFNYIIKNYDISHRYIIHDYSFINLKQLYLFIFFNIY-KYFKYISTPGDAV 1783 Query: 377 GCVAAQSIGEPATQMTLNTFHYAGVSA 457 G ++AQSIGEP TQMTL TFH+AGV++ Sbjct: 1784 GSISAQSIGEPGTQMTLKTFHFAGVAS 1810
>RPA1_TRYBB (P16355) DNA-directed RNA polymerase I largest subunit (EC 2.7.7.6)| Length = 1744 Score = 55.5 bits (132), Expect = 7e-08 Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 8/81 (9%) Frame = +2 Query: 230 LFFNILLRSTFASKRVLKEYRLTKESFEWVIGEIES--------RFLQSLVAPGEMIGCV 385 LF + + + +K+ LKE RL + +WV G E R L +L PGE +G + Sbjct: 1109 LFRKVSTLARWDAKQQLKE-RLQQRRQKWV-GAFEKTLADITARRRLWALCEPGEPVGLL 1166 Query: 386 AAQSIGEPATQMTLNTFHYAG 448 AAQ+ GEP+TQMTLNTFH AG Sbjct: 1167 AAQAAGEPSTQMTLNTFHTAG 1187
>RPC1_GIALA (P25202) DNA-directed RNA polymerase III largest subunit (EC 2.7.7.6)| Length = 1741 Score = 55.5 bits (132), Expect = 7e-08 Identities = 23/55 (41%), Positives = 40/55 (72%) Frame = +2 Query: 293 LTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 LTK+ + + ++ ++++ + PG G VAAQS+GEP+TQMTL +FH+AG+++ Sbjct: 1267 LTKKDIDDFLRQVRRKYIRLNLEPGSPCGAVAAQSVGEPSTQMTLKSFHHAGLAS 1321
>RPC1_YEAST (P04051) DNA-directed RNA polymerase III largest subunit (EC 2.7.7.6)| (C160) Length = 1460 Score = 55.1 bits (131), Expect = 9e-08 Identities = 25/57 (43%), Positives = 39/57 (68%) Frame = +2 Query: 287 YRLTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 YR++++S + ++ ++ + PG IG + AQSIGEP TQMTL TFH+AGV++ Sbjct: 1060 YRISEKSVRKFLEIALFKYRKARLEPGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1116
>RPC1_HUMAN (O14802) DNA-directed RNA polymerase III largest subunit (EC 2.7.7.6)| (RPC155) (RPC1) Length = 1391 Score = 54.7 bits (130), Expect = 1e-07 Identities = 23/56 (41%), Positives = 36/56 (64%) Frame = +2 Query: 290 RLTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 R+T E + +++++ + PG +G + AQSIGEP TQMTL TFH+ GV++ Sbjct: 1005 RITPTQVEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFGGVAS 1060
>RPOA2_PYRAE (Q8ZYQ7) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)| Length = 379 Score = 53.9 bits (128), Expect = 2e-07 Identities = 24/37 (64%), Positives = 29/37 (78%) Frame = +2 Query: 341 FLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 ++ SL+ PGE IG V AQSIGEP TQM L +FHYAG+ Sbjct: 46 YVTSLIDPGEAIGIVTAQSIGEPGTQMILRSFHYAGL 82
>RPC1_DEBHA (Q6BI69) DNA-directed RNA polymerase III largest subunit (EC 2.7.7.6)| Length = 1457 Score = 53.5 bits (127), Expect = 3e-07 Identities = 48/183 (26%), Positives = 80/183 (43%), Gaps = 48/183 (26%) Frame = +2 Query: 53 PVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDK----LQERL-------KVVPGDDA 199 PVN R W+ D+ + P +I+E +D L++RL K++P +D+ Sbjct: 928 PVNFVRQ-WDHAYNITFDIE-DKGLLPYQIIELVDSILHPLEDRLVRYDNVGKIIPLEDS 985 Query: 200 MSIEA--QKNATLFFNILLR----------STFASKRVLKEY------------------ 289 IE Q +A F +R + K++LK + Sbjct: 986 DKIEYIDQNDAEREFYQSIREFTTNKATKLAEIREKKMLKPFLTEPAEDFIRLDESDESL 1045 Query: 290 -------RLTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG 448 +++ S + + ++ ++ V PG +G + AQSIGEP TQMTL TFH+AG Sbjct: 1046 VAINQLSKVSANSINKFLEQCIYKYSRAKVEPGTAVGAIGAQSIGEPGTQMTLKTFHFAG 1105 Query: 449 VSA 457 V++ Sbjct: 1106 VAS 1108
>RPOA2_THEVO (Q979F5) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)| Length = 508 Score = 53.1 bits (126), Expect = 3e-07 Identities = 23/51 (45%), Positives = 33/51 (64%) Frame = +2 Query: 299 KESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 ++ + ++ I L+ P E +G +AAQSIGEP TQMT+ TFH+AGV Sbjct: 158 EKKYREILKRIGEEIQDELIDPYEAVGIIAAQSIGEPGTQMTMRTFHFAGV 208
>RPOA2_THEAC (Q03586) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)| Length = 508 Score = 52.8 bits (125), Expect = 4e-07 Identities = 23/51 (45%), Positives = 35/51 (68%) Frame = +2 Query: 299 KESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 +++++ ++ I L+ P E +G +AAQSIGEP TQMT+ TFH+AGV Sbjct: 158 EKAYKNILKRIGEEIGNELIDPYEAVGIIAAQSIGEPGTQMTMRTFHFAGV 208
>RPOC2_PSINU (Q8WI26) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1408 Score = 51.6 bits (122), Expect = 1e-06 Identities = 28/55 (50%), Positives = 34/55 (61%), Gaps = 2/55 (3%) Frame = +2 Query: 293 LTKESFEWVIGEIESRFL--QSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 LT++S WV L Q+LV GE +G +A QSIGEP TQ+TL TFH GV Sbjct: 290 LTRKSISWVCQLCYGWSLTHQNLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGV 344
>RPOA2_METJA (Q58446) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)| [Contains: Mja rpoA2 intein (Mja rpol A'' intein)] Length = 859 Score = 51.2 bits (121), Expect = 1e-06 Identities = 25/53 (47%), Positives = 38/53 (71%) Frame = +2 Query: 269 KRVLKEYRLTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTL 427 +++ KE LT+E + +I E+ + + ++LV P E +G VAAQSIGEP TQM+L Sbjct: 25 EKLSKEKDLTEEMVDEIIDEVVNAYRKALVEPYEAVGIVAAQSIGEPGTQMSL 77
>RPOC_PORGI (Q7MX26) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1433 Score = 51.2 bits (121), Expect = 1e-06 Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%) Frame = +2 Query: 293 LTKESFEWVIGEIESRFLQS--LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKM 463 LT ES + V + R L + +V GE++G +AAQSIGEP TQ+TL TFH G+++ + Sbjct: 887 LTCESKKGVCAKCYGRNLATNRMVQRGEVVGVIAAQSIGEPGTQLTLRTFHVGGIASNV 945
>RPOC_RICTY (Q68XM7) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1372 Score = 50.8 bits (120), Expect = 2e-06 Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 2/65 (3%) Frame = +2 Query: 272 RVLKEYRLTKESFEWVIGEIESRFLQS--LVAPGEMIGCVAAQSIGEPATQMTLNTFHYA 445 R++ + LT ES + R L + LV+ GE IG +AAQSIGEP TQ+T+ TFH Sbjct: 873 RIMIKSVLTCESSTGICSICYGRDLATGTLVSEGEAIGVIAAQSIGEPGTQLTMRTFHIG 932 Query: 446 GVSAK 460 G + K Sbjct: 933 GAATK 937
>RPOC_RICPR (Q9ZE20) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1372 Score = 50.8 bits (120), Expect = 2e-06 Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 2/65 (3%) Frame = +2 Query: 272 RVLKEYRLTKESFEWVIGEIESRFLQS--LVAPGEMIGCVAAQSIGEPATQMTLNTFHYA 445 R++ + LT ES + R L + LV+ GE IG +AAQSIGEP TQ+T+ TFH Sbjct: 873 RIMIKSVLTCESSTGICSICYGRDLATGTLVSEGEAIGVIAAQSIGEPGTQLTMRTFHIG 932 Query: 446 GVSAK 460 G + K Sbjct: 933 GAATK 937
>RPOC_RICFE (Q4UKD5) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1372 Score = 50.8 bits (120), Expect = 2e-06 Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 2/65 (3%) Frame = +2 Query: 272 RVLKEYRLTKESFEWVIGEIESRFLQS--LVAPGEMIGCVAAQSIGEPATQMTLNTFHYA 445 R++ + LT ES + R L + LV+ GE IG +AAQSIGEP TQ+T+ TFH Sbjct: 873 RIMIKSVLTCESTTGICSICYGRDLATGTLVSEGEAIGVIAAQSIGEPGTQLTMRTFHIG 932 Query: 446 GVSAK 460 G + K Sbjct: 933 GAATK 937
>RPOC_RICCN (Q9RH40) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1372 Score = 50.8 bits (120), Expect = 2e-06 Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 2/65 (3%) Frame = +2 Query: 272 RVLKEYRLTKESFEWVIGEIESRFLQS--LVAPGEMIGCVAAQSIGEPATQMTLNTFHYA 445 R++ + LT ES + R L + LV+ GE IG +AAQSIGEP TQ+T+ TFH Sbjct: 873 RIMIKSVLTCESTTGICSICYGRDLATGTLVSEGEAIGVIAAQSIGEPGTQLTMRTFHIG 932 Query: 446 GVSAK 460 G + K Sbjct: 933 GAATK 937
>RPOC2_MARPO (P06274) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1386 Score = 50.4 bits (119), Expect = 2e-06 Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Frame = +2 Query: 257 TFASKRVLKEYRLTKESFEWVIGEIESRFLQ--SLVAPGEMIGCVAAQSIGEPATQMTLN 430 T +K++ LT +S W+ L +L+ GE +G +A QSIGEP TQ+TL Sbjct: 275 TLKTKQIFLRSPLTCKSMNWICQLCYGWSLSHGNLIEMGEAVGIIAGQSIGEPGTQLTLR 334 Query: 431 TFHYAGV 451 TFH GV Sbjct: 335 TFHTGGV 341
>RPOBC_HELHP (Q7VJ82) Bifunctional DNA-directed RNA polymerase, beta and beta'| chain (EC 2.7.7.6) [Includes: DNA-directed RNA polymerase beta chain (Transcriptase beta chain) (RNA polymerase beta subunit); DNA-directed RNA polymerase beta' chain (Transcri Length = 2894 Score = 50.4 bits (119), Expect = 2e-06 Identities = 21/36 (58%), Positives = 28/36 (77%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 +V PGE +G +AAQSIGEP TQ+TL TFH G +++ Sbjct: 2273 MVKPGEAVGVLAAQSIGEPGTQLTLRTFHVGGTASR 2308
>RPOC_PORCN (O33431) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) (Fragment) Length = 1159 Score = 50.4 bits (119), Expect = 2e-06 Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 2/59 (3%) Frame = +2 Query: 293 LTKESFEWVIGEIESRFLQS--LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKM 463 LT ES + V + R L +V GE++G VAAQSIGEP TQ+TL TFH G+++ + Sbjct: 813 LTCESKKGVCAKCYGRNLSQGHMVHIGEVVGVVAAQSIGEPGTQLTLRTFHTGGIASNI 871
>RPOC_BACFR (Q64NJ8) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1427 Score = 50.4 bits (119), Expect = 2e-06 Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 2/59 (3%) Frame = +2 Query: 293 LTKESFEWVIGEIESRFLQS--LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKM 463 LT ES + V + R L + +V GE +G +AAQSIGEP TQ+TL TFH G +A + Sbjct: 887 LTCESKKGVCAKCYGRNLATNHMVQKGEAVGVIAAQSIGEPGTQLTLRTFHAGGTAANI 945
>RPOC_BACFN (Q5L898) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1427 Score = 50.4 bits (119), Expect = 2e-06 Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 2/59 (3%) Frame = +2 Query: 293 LTKESFEWVIGEIESRFLQS--LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKM 463 LT ES + V + R L + +V GE +G +AAQSIGEP TQ+TL TFH G +A + Sbjct: 887 LTCESKKGVCAKCYGRNLATNHMVQKGEAVGVIAAQSIGEPGTQLTLRTFHAGGTAANI 945
>RPOBC_WOLSU (Q7MA56) Bifunctional DNA-directed RNA polymerase, beta and beta'| chain (EC 2.7.7.6) [Includes: DNA-directed RNA polymerase beta chain (Transcriptase beta chain) (RNA polymerase beta subunit); DNA-directed RNA polymerase beta' chain (Transcri Length = 2883 Score = 49.7 bits (117), Expect = 4e-06 Identities = 21/33 (63%), Positives = 26/33 (78%) Frame = +2 Query: 362 PGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 PGE +G VAAQSIGEP TQ+TL TFH G +++ Sbjct: 2273 PGEAVGVVAAQSIGEPGTQLTLRTFHIGGTASR 2305
>RPOBC_HELPY (O25806) Bifunctional DNA-directed RNA polymerase, beta and beta'| chain (EC 2.7.7.6) [Includes: DNA-directed RNA polymerase beta chain (Transcriptase beta chain) (RNA polymerase beta subunit); DNA-directed RNA polymerase beta' chain (Transcri Length = 2890 Score = 49.7 bits (117), Expect = 4e-06 Identities = 21/33 (63%), Positives = 26/33 (78%) Frame = +2 Query: 362 PGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 PGE +G VAAQSIGEP TQ+TL TFH G +++ Sbjct: 2276 PGEAVGVVAAQSIGEPGTQLTLRTFHVGGTASR 2308
>RPOBC_HELPJ (Q9ZK23) Bifunctional DNA-directed RNA polymerase, beta and beta'| chain (EC 2.7.7.6) [Includes: DNA-directed RNA polymerase beta chain (Transcriptase beta chain) (RNA polymerase beta subunit); DNA-directed RNA polymerase beta' chain (Transcri Length = 2890 Score = 49.7 bits (117), Expect = 4e-06 Identities = 21/33 (63%), Positives = 26/33 (78%) Frame = +2 Query: 362 PGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 PGE +G VAAQSIGEP TQ+TL TFH G +++ Sbjct: 2276 PGEAVGVVAAQSIGEPGTQLTLRTFHVGGTASR 2308
>RPOC_CAMJR (Q5HVY8) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1517 Score = 49.7 bits (117), Expect = 4e-06 Identities = 21/35 (60%), Positives = 27/35 (77%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 LV PGE +G ++AQSIGEP TQ+TL TFH G ++ Sbjct: 906 LVKPGEAVGIISAQSIGEPGTQLTLRTFHSGGTAS 940
>RPOC_CAMJE (Q9PI30) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1517 Score = 49.7 bits (117), Expect = 4e-06 Identities = 21/35 (60%), Positives = 27/35 (77%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 LV PGE +G ++AQSIGEP TQ+TL TFH G ++ Sbjct: 906 LVKPGEAVGIISAQSIGEPGTQLTLRTFHSGGTAS 940
>RPOC_SILPO (Q5LMQ6) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1413 Score = 49.7 bits (117), Expect = 4e-06 Identities = 28/56 (50%), Positives = 35/56 (62%), Gaps = 2/56 (3%) Frame = +2 Query: 293 LTKESFEWVIGEIESRFLQ--SLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 LT ES E V R L ++V GE +G +AAQSIGEP TQ+T+ TFH GV+ Sbjct: 883 LTCESEEGVCAMCYGRDLARGTMVNQGEAVGIIAAQSIGEPGTQLTMRTFHIGGVA 938
>RPOC2_CYACA (Q9TM34) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1269 Score = 49.3 bits (116), Expect = 5e-06 Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 14/85 (16%) Frame = +2 Query: 239 NILLRSTFASKRVLKEYR------------LTKESFEWVIGEIESRFLQS--LVAPGEMI 376 NI ++T + ++KE++ LT +S+ + + L LV GE I Sbjct: 269 NIASKNTLITGNLIKEFKKNNIQKIKLRSPLTCQSYRSICQKCYGASLSDGKLVDIGEAI 328 Query: 377 GCVAAQSIGEPATQMTLNTFHYAGV 451 G +AAQSIGEP TQ+T+ TFH GV Sbjct: 329 GIIAAQSIGEPGTQLTMRTFHTGGV 353
>RPOC_BACTN (Q8A470) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1427 Score = 49.3 bits (116), Expect = 5e-06 Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 2/59 (3%) Frame = +2 Query: 293 LTKESFEWVIGEIESRFLQS--LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKM 463 LT E+ + V + R L + +V GE +G +AAQSIGEP TQ+TL TFH G +A + Sbjct: 887 LTCEAKKGVCAKCYGRNLATSRMVQKGEAVGVIAAQSIGEPGTQLTLRTFHAGGTAANI 945
>RPOC2_MESVI (Q9MUS7) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1223 Score = 49.3 bits (116), Expect = 5e-06 Identities = 29/71 (40%), Positives = 39/71 (54%) Frame = +2 Query: 239 NILLRSTFASKRVLKEYRLTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQ 418 NIL+RS K + +L + W + +LV GE +G +AAQSIGEP TQ Sbjct: 298 NILVRSPLTCKSIRSVCQLC---YGWSLAH------GNLVDLGEAVGIIAAQSIGEPGTQ 348 Query: 419 MTLNTFHYAGV 451 +T+ TFH GV Sbjct: 349 LTMRTFHTGGV 359
>RPOC_CHLPN (Q9Z999) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1393 Score = 49.3 bits (116), Expect = 5e-06 Identities = 20/35 (57%), Positives = 27/35 (77%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 L+ GE +G +AAQSIGEP TQ+T+ TFH G++A Sbjct: 907 LIGMGEAVGIIAAQSIGEPGTQLTMRTFHLGGIAA 941
>RPOC_AZOSE (Q5P338) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1409 Score = 48.9 bits (115), Expect = 6e-06 Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 9/114 (7%) Frame = +2 Query: 146 EAIDKLQER-LKVVPGDDAMSIEAQKNATLFFNIL------LRSTFASKRVLKEYRLTKE 304 E I+ L++R L V +D ++ E+Q+ ++L L + V LT E Sbjct: 832 EVIEPLRDRILGRVCAEDVVNPESQETVIEAGSLLGEDAVDLIESLGIDEVKVRTALTCE 891 Query: 305 SFEWVIGEIESRFLQ--SLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 + + G+ R L S V GE +G +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 892 TRYGLCGKCYGRDLGRGSQVNVGEAVGVIAAQSIGEPGTQLTMRTFHVGGAASR 945
>RPOC_BURPS (Q63Q04) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1412 Score = 48.9 bits (115), Expect = 6e-06 Identities = 21/37 (56%), Positives = 28/37 (75%) Frame = +2 Query: 350 SLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 SLV GE +G +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 912 SLVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASR 948
>RPOC_BURP1 (Q3JMQ4) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1412 Score = 48.9 bits (115), Expect = 6e-06 Identities = 21/37 (56%), Positives = 28/37 (75%) Frame = +2 Query: 350 SLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 SLV GE +G +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 912 SLVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASR 948
>RPOC_BURMA (Q62GJ7) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1412 Score = 48.9 bits (115), Expect = 6e-06 Identities = 21/37 (56%), Positives = 28/37 (75%) Frame = +2 Query: 350 SLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 SLV GE +G +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 912 SLVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASR 948
>RPOC2_NEPOL (Q9TL04) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1463 Score = 48.9 bits (115), Expect = 6e-06 Identities = 29/72 (40%), Positives = 41/72 (56%) Frame = +2 Query: 242 ILLRSTFASKRVLKEYRLTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQM 421 IL+RS K + L + + W +G ++V+ GE +G +AAQSIGEP TQ+ Sbjct: 304 ILVRSVLLCK---SKRGLCRLCYGWNLGT------GTIVSIGEAVGIIAAQSIGEPGTQL 354 Query: 422 TLNTFHYAGVSA 457 T+ TFH GV A Sbjct: 355 TMRTFHTGGVFA 366
>RPOC_CHLTR (O84316) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1396 Score = 48.9 bits (115), Expect = 6e-06 Identities = 20/35 (57%), Positives = 27/35 (77%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 L+ GE +G +AAQSIGEP TQ+T+ TFH G++A Sbjct: 909 LIGLGEAVGIIAAQSIGEPGTQLTMRTFHLGGIAA 943
>RPOC_CHLTA (Q3KM48) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1396 Score = 48.9 bits (115), Expect = 6e-06 Identities = 20/35 (57%), Positives = 27/35 (77%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 L+ GE +G +AAQSIGEP TQ+T+ TFH G++A Sbjct: 909 LIGLGEAVGIIAAQSIGEPGTQLTMRTFHLGGIAA 943
>RPOC_CHLMU (Q9PK79) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1396 Score = 48.9 bits (115), Expect = 6e-06 Identities = 20/35 (57%), Positives = 27/35 (77%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 L+ GE +G +AAQSIGEP TQ+T+ TFH G++A Sbjct: 909 LIGLGEAVGIIAAQSIGEPGTQLTMRTFHLGGIAA 943
>RPOC_BURS3 (Q39KH4) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1414 Score = 48.9 bits (115), Expect = 6e-06 Identities = 21/37 (56%), Positives = 28/37 (75%) Frame = +2 Query: 350 SLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 SLV GE +G +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 912 SLVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASR 948
>RPOC_CHLCV (Q822J2) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1393 Score = 48.9 bits (115), Expect = 6e-06 Identities = 20/35 (57%), Positives = 27/35 (77%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 L+ GE +G +AAQSIGEP TQ+T+ TFH G++A Sbjct: 907 LIGLGEAVGIIAAQSIGEPGTQLTMRTFHLGGIAA 941
>RPOC_CHLAB (Q5L5I4) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1393 Score = 48.9 bits (115), Expect = 6e-06 Identities = 20/35 (57%), Positives = 27/35 (77%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 L+ GE +G +AAQSIGEP TQ+T+ TFH G++A Sbjct: 907 LIGLGEAVGIIAAQSIGEPGTQLTMRTFHLGGIAA 941
>RPOC_WIGBR (Q8D232) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1405 Score = 48.9 bits (115), Expect = 6e-06 Identities = 21/37 (56%), Positives = 28/37 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKM 463 LV GE IG +AAQSIGEP TQ+T+ TFH G ++++ Sbjct: 908 LVNKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRL 944
>RPOC2_PROMP (Q7V008) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1366 Score = 48.5 bits (114), Expect = 8e-06 Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 1/93 (1%) Frame = +2 Query: 179 VVPGDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYR-LTKESFEWVIGEIESRFLQSL 355 +VP + A I+ + TL +++ + S + R + ++ + W + L Sbjct: 284 IVPKNTA--IDPSLSKTLETSLISKVNIRSPLTCEANRSVCRKCYGWALAH------NHL 335 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 V GE +G +AAQSIGEP TQ+T+ TFH GVS Sbjct: 336 VDLGEAVGIIAAQSIGEPGTQLTMRTFHTGGVS 368
>RPOC_BUCAI (P57145) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1407 Score = 48.5 bits (114), Expect = 8e-06 Identities = 21/37 (56%), Positives = 28/37 (75%) Frame = +2 Query: 350 SLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 +LV GE IG +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 907 NLVNKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASR 943
>RPOC_BIFLO (Q8G515) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1345 Score = 48.5 bits (114), Expect = 8e-06 Identities = 23/35 (65%), Positives = 27/35 (77%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 LV GE +G VAAQSIGEP TQ+TL +FH GV+A Sbjct: 994 LVDVGETVGIVAAQSIGEPGTQLTLRSFHSGGVAA 1028
>RPOC_ACIAD (Q6FF89) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1397 Score = 48.5 bits (114), Expect = 8e-06 Identities = 20/35 (57%), Positives = 27/35 (77%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 V PGE +G +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 914 VNPGESVGVMAAQSIGEPGTQLTMRTFHVGGAASR 948
>RPOC_BUCAP (P41185) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1413 Score = 48.5 bits (114), Expect = 8e-06 Identities = 21/37 (56%), Positives = 28/37 (75%) Frame = +2 Query: 350 SLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 +LV GE IG +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 907 NLVNKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASR 943
>RPOC2_PROMT (Q46J24) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1369 Score = 48.5 bits (114), Expect = 8e-06 Identities = 23/34 (67%), Positives = 26/34 (76%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 LV GE +G VAAQSIGEP TQ+T+ TFH GVS Sbjct: 340 LVDLGEAVGIVAAQSIGEPGTQLTMRTFHTGGVS 373
>RPOC2_CHLRE (Q7PCJ6) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 3120 Score = 48.5 bits (114), Expect = 8e-06 Identities = 21/34 (61%), Positives = 27/34 (79%) Frame = +2 Query: 350 SLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 +LV+ GE +G +AAQSIGEP TQ+T+ TFH GV Sbjct: 415 NLVSVGEAVGVIAAQSIGEPGTQLTMRTFHTGGV 448
>RPOC_BUCBP (Q89B21) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1404 Score = 48.5 bits (114), Expect = 8e-06 Identities = 21/37 (56%), Positives = 28/37 (75%) Frame = +2 Query: 350 SLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 +LV GE IG +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 907 NLVNKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASR 943 Score = 28.9 bits (63), Expect = 6.8 Identities = 14/45 (31%), Positives = 27/45 (60%) Frame = +2 Query: 242 ILLRSTFASKRVLKEYRLTKESFEWVIGEIESRFLQSLVAPGEMI 376 I++ S ++L ++R TKES++ G I ++ + LV GE++ Sbjct: 973 IVITSRNVELKILDKFRRTKESYKVPYGAIIAKMDEELVNSGEIV 1017
>RPOC_MESFL (Q6F0L8) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1254 Score = 48.5 bits (114), Expect = 8e-06 Identities = 22/35 (62%), Positives = 27/35 (77%) Frame = +2 Query: 350 SLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 SLV GE +G +AAQSIGEP TQ+T+ TFH GV+ Sbjct: 965 SLVKIGEPVGVIAAQSIGEPGTQLTMRTFHTGGVA 999
>RPOC_BLOFL (Q7VRP8) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1420 Score = 48.5 bits (114), Expect = 8e-06 Identities = 21/37 (56%), Positives = 28/37 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKM 463 LV GE IG +AAQSIGEP TQ+T+ TFH G ++++ Sbjct: 916 LVNKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRV 952
>RPOC2_SYNPX (Q7U8K2) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1364 Score = 48.5 bits (114), Expect = 8e-06 Identities = 24/52 (46%), Positives = 32/52 (61%) Frame = +2 Query: 299 KESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 ++ + W + E LV GE +G +AAQSIGEP TQ+T+ TFH GVS Sbjct: 325 RKCYGWALAHNE------LVDLGEAVGIIAAQSIGEPGTQLTMRTFHTGGVS 370
>RPOC_CARHZ (Q3A9Q8) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1152 Score = 48.1 bits (113), Expect = 1e-05 Identities = 21/37 (56%), Positives = 28/37 (75%) Frame = +2 Query: 350 SLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 S+V GE +G +AAQSIGEP TQ+T+ TFH GV+ + Sbjct: 872 SIVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGE 908
>RPOC2_GUITH (O78483) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1286 Score = 48.1 bits (113), Expect = 1e-05 Identities = 22/34 (64%), Positives = 26/34 (76%) Frame = +2 Query: 350 SLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 SLV GE +G +AAQSIGEP TQ+T+ TFH GV Sbjct: 318 SLVDLGEAVGIIAAQSIGEPGTQLTMRTFHTGGV 351
>RPOC2_PSEAK (Q3ZJ90) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 3462 Score = 48.1 bits (113), Expect = 1e-05 Identities = 22/33 (66%), Positives = 25/33 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 LV GE IG +AAQSIGEP TQ+T+ TFH GV Sbjct: 355 LVPSGEAIGIIAAQSIGEPGTQLTMRTFHTGGV 387
>RPOC2_PROMA (Q7VA30) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1367 Score = 48.1 bits (113), Expect = 1e-05 Identities = 22/34 (64%), Positives = 26/34 (76%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 LV GE +G +AAQSIGEP TQ+T+ TFH GVS Sbjct: 337 LVDLGEAVGIIAAQSIGEPGTQLTMRTFHTGGVS 370
>RPOC_RHOS4 (Q3J5S9) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1415 Score = 48.1 bits (113), Expect = 1e-05 Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 2/56 (3%) Frame = +2 Query: 293 LTKESFEWVIGEIESRFLQ--SLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 LT E+ E V R L +LV GE +G +AAQSIGEP TQ+T+ TFH G++ Sbjct: 883 LTCEAEEGVCAMCYGRDLARGTLVNIGEAVGIIAAQSIGEPGTQLTMRTFHIGGIA 938
>RPOC_NOCFA (Q5YPE1) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1317 Score = 47.8 bits (112), Expect = 1e-05 Identities = 22/34 (64%), Positives = 26/34 (76%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 LV GE +G VAAQSIGEP TQ+T+ TFH GV+ Sbjct: 987 LVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGVA 1020
>RPOC_RALEJ (Q46WD5) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1415 Score = 47.8 bits (112), Expect = 1e-05 Identities = 20/36 (55%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 LV GE +G +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 914 LVNSGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASR 949
>RPOC_LEGPL (Q5WZL8) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1401 Score = 47.8 bits (112), Expect = 1e-05 Identities = 20/36 (55%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 LV GE +G +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 902 LVNTGEAVGIIAAQSIGEPGTQLTMRTFHIGGAASR 937
>RPOC_LEGPH (Q5ZYP9) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1401 Score = 47.8 bits (112), Expect = 1e-05 Identities = 20/36 (55%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 LV GE +G +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 902 LVNTGEAVGIIAAQSIGEPGTQLTMRTFHIGGAASR 937
>RPOC_LEGPA (Q5X865) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1401 Score = 47.8 bits (112), Expect = 1e-05 Identities = 20/36 (55%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 LV GE +G +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 902 LVNTGEAVGIIAAQSIGEPGTQLTMRTFHIGGAASR 937
>RPOC_PHOPR (Q6LLW3) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1404 Score = 47.8 bits (112), Expect = 1e-05 Identities = 20/36 (55%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 L+ GE +G VAAQSIGEP TQ+T+ TFH G +++ Sbjct: 909 LINTGEAVGVVAAQSIGEPGTQLTMRTFHIGGAASR 944
>RPOC_RALSO (Q8XUZ9) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1409 Score = 47.8 bits (112), Expect = 1e-05 Identities = 20/36 (55%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 LV GE +G +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 914 LVNSGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASR 949
>RPOC_NEIMB (Q9K1J1) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1391 Score = 47.8 bits (112), Expect = 1e-05 Identities = 20/36 (55%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 LV GE +G +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 910 LVNAGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASR 945
>RPOC_NEIMA (Q9JX03) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1391 Score = 47.8 bits (112), Expect = 1e-05 Identities = 20/36 (55%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 LV GE +G +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 910 LVNAGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASR 945
>RPOC_NEIG1 (Q5F5R6) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1391 Score = 47.8 bits (112), Expect = 1e-05 Identities = 20/36 (55%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 LV GE +G +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 910 LVNAGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASR 945
>RPOC_OENOE (P95405) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) (Fragment) Length = 1004 Score = 47.4 bits (111), Expect = 2e-05 Identities = 21/34 (61%), Positives = 26/34 (76%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 +V GE +G VAAQSIGEP TQ+T+ TFH GV+ Sbjct: 851 IVEVGEAVGTVAAQSIGEPGTQLTMRTFHTGGVA 884
>RPOC_THIDA (Q3SLQ5) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1398 Score = 47.4 bits (111), Expect = 2e-05 Identities = 20/36 (55%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 LV GE +G +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 908 LVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASR 943
>RPOC_BLOPB (Q492C0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1416 Score = 47.4 bits (111), Expect = 2e-05 Identities = 20/36 (55%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 +V GE IG +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 912 IVNKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASR 947
>RPOC_CHLCH (Q3ATP4) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1502 Score = 47.4 bits (111), Expect = 2e-05 Identities = 21/37 (56%), Positives = 26/37 (70%) Frame = +2 Query: 344 LQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 + LV GE +G +AAQSIGEP TQ+TL TFH G + Sbjct: 960 VHQLVEIGEAVGVIAAQSIGEPGTQLTLRTFHQGGAA 996
>RPOC_MYCTU (P0A674) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1316 Score = 47.4 bits (111), Expect = 2e-05 Identities = 22/33 (66%), Positives = 25/33 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 LV GE +G VAAQSIGEP TQ+T+ TFH GV Sbjct: 988 LVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGV 1020
>RPOC_MYCPA (Q73SE3) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1316 Score = 47.4 bits (111), Expect = 2e-05 Identities = 22/33 (66%), Positives = 25/33 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 LV GE +G VAAQSIGEP TQ+T+ TFH GV Sbjct: 988 LVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGV 1020
>RPOC_MYCLE (P30761) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1316 Score = 47.4 bits (111), Expect = 2e-05 Identities = 22/33 (66%), Positives = 25/33 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 LV GE +G VAAQSIGEP TQ+T+ TFH GV Sbjct: 988 LVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGV 1020
>RPOC_MYCBO (P0A675) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1316 Score = 47.4 bits (111), Expect = 2e-05 Identities = 22/33 (66%), Positives = 25/33 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 LV GE +G VAAQSIGEP TQ+T+ TFH GV Sbjct: 988 LVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGV 1020
>RPOC_CHLTE (Q8KG14) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1490 Score = 47.4 bits (111), Expect = 2e-05 Identities = 21/37 (56%), Positives = 26/37 (70%) Frame = +2 Query: 344 LQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 + LV GE +G +AAQSIGEP TQ+TL TFH G + Sbjct: 961 VHKLVEIGEAVGVIAAQSIGEPGTQLTLRTFHQGGAA 997
>RPOC_PROAC (Q6A6K7) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1293 Score = 47.4 bits (111), Expect = 2e-05 Identities = 21/34 (61%), Positives = 26/34 (76%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 LV GE +G +AAQSIGEP TQ+T+ TFH GV+ Sbjct: 970 LVDVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVA 1003
>RPOC_SYMTH (Q67JT4) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1179 Score = 47.4 bits (111), Expect = 2e-05 Identities = 21/34 (61%), Positives = 26/34 (76%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 LV GE +G +AAQSIGEP TQ+T+ TFH GV+ Sbjct: 891 LVDVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVA 924
>RPOC_DESPS (Q6AP77) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1349 Score = 47.4 bits (111), Expect = 2e-05 Identities = 19/36 (52%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 L+ GE +G +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 895 LINQGEAVGVIAAQSIGEPGTQLTMRTFHIGGTASR 930
>RPOC_DECAR (Q47JA9) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1403 Score = 47.4 bits (111), Expect = 2e-05 Identities = 19/37 (51%), Positives = 28/37 (75%) Frame = +2 Query: 350 SLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 ++V GE +G +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 909 TMVNAGEAVGVIAAQSIGEPGTQLTMRTFHVGGAASR 945
>RPOC_NITEU (Q82T76) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1404 Score = 47.4 bits (111), Expect = 2e-05 Identities = 20/36 (55%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 LV GE +G +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 919 LVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASR 954
>RPOC_LACAC (Q5FM96) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1217 Score = 47.4 bits (111), Expect = 2e-05 Identities = 22/33 (66%), Positives = 25/33 (75%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 V GE +G VAAQSIGEP TQ+TL TFH GV+ Sbjct: 916 VEVGEAVGTVAAQSIGEPGTQLTLRTFHNGGVA 948
>RPOC_CORDI (Q6NJF6) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1336 Score = 47.4 bits (111), Expect = 2e-05 Identities = 22/33 (66%), Positives = 25/33 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 LV GE +G VAAQSIGEP TQ+T+ TFH GV Sbjct: 1004 LVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGV 1036
>RPOBC_WOLTR (Q5GRY9) Bifunctional DNA-directed RNA polymerase, beta and beta'| chain (EC 2.7.7.6) [Includes: DNA-directed RNA polymerase beta chain (Transcriptase beta chain) (RNA polymerase beta subunit); DNA-directed RNA polymerase beta' chain (Transcri Length = 2839 Score = 47.4 bits (111), Expect = 2e-05 Identities = 19/36 (52%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 +V+ GE +G +AAQS+GEP TQ+T+ TFH GV + Sbjct: 2332 IVSIGEAVGVIAAQSVGEPGTQLTMRTFHIGGVMTR 2367
>RPOC2_NOSCO (P14564) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) (Fragment) Length = 717 Score = 47.4 bits (111), Expect = 2e-05 Identities = 21/34 (61%), Positives = 26/34 (76%) Frame = +2 Query: 350 SLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 S+V GE +G +AAQSIGEP TQ+T+ TFH GV Sbjct: 310 SMVDLGEAVGIIAAQSIGEPGTQLTMRTFHTGGV 343
>RPOBC_WOLPM (Q73IW9) Bifunctional DNA-directed RNA polymerase, beta and beta'| chain (EC 2.7.7.6) [Includes: DNA-directed RNA polymerase beta chain (Transcriptase beta chain) (RNA polymerase beta subunit); DNA-directed RNA polymerase beta' chain (Transcri Length = 2837 Score = 47.4 bits (111), Expect = 2e-05 Identities = 19/36 (52%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 +V+ GE +G +AAQS+GEP TQ+T+ TFH GV + Sbjct: 2329 IVSIGEAVGVIAAQSVGEPGTQLTMRTFHIGGVMTR 2364
>RPOC_COLP3 (Q47UW0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1406 Score = 47.4 bits (111), Expect = 2e-05 Identities = 20/36 (55%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 ++ GE IG VAAQSIGEP TQ+T+ TFH G +++ Sbjct: 908 MINQGEAIGVVAAQSIGEPGTQLTMRTFHIGGAASR 943
>RPOC_THET2 (Q72HM6) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1513 Score = 47.0 bits (110), Expect = 2e-05 Identities = 21/33 (63%), Positives = 26/33 (78%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 V+ GE +G VAAQSIGEP TQ+T+ TFH GV+ Sbjct: 1204 VSIGEAVGIVAAQSIGEPGTQLTMRTFHTGGVA 1236
>RPOC_CLOAB (Q97EH0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1182 Score = 47.0 bits (110), Expect = 2e-05 Identities = 20/33 (60%), Positives = 26/33 (78%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 ++ GE +G VAAQSIGEP TQ+T+ TFH GV+ Sbjct: 889 ISMGEAVGIVAAQSIGEPGTQLTMRTFHTGGVA 921
>RPOC_THET8 (Q8RQE8) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1524 Score = 47.0 bits (110), Expect = 2e-05 Identities = 21/33 (63%), Positives = 26/33 (78%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 V+ GE +G VAAQSIGEP TQ+T+ TFH GV+ Sbjct: 1215 VSIGEAVGIVAAQSIGEPGTQLTMRTFHTGGVA 1247
>RPOC_THEMA (P36252) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1690 Score = 47.0 bits (110), Expect = 2e-05 Identities = 21/33 (63%), Positives = 25/33 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 +V GE +G VAAQSIGEP TQ+T+ TFH GV Sbjct: 1315 IVNVGEAVGVVAAQSIGEPGTQLTMRTFHVGGV 1347
>RPOC_VIBVY (Q7MGS0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1400 Score = 47.0 bits (110), Expect = 2e-05 Identities = 20/35 (57%), Positives = 26/35 (74%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 LV GE +G +AAQSIGEP TQ+T+ TFH G ++ Sbjct: 908 LVNQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAS 942
>RPOC_VIBVU (Q8DD19) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1400 Score = 47.0 bits (110), Expect = 2e-05 Identities = 20/35 (57%), Positives = 26/35 (74%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 LV GE +G +AAQSIGEP TQ+T+ TFH G ++ Sbjct: 908 LVNQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAS 942
>RPOC_VIBPA (Q87KQ5) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1400 Score = 47.0 bits (110), Expect = 2e-05 Identities = 20/35 (57%), Positives = 26/35 (74%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 LV GE +G +AAQSIGEP TQ+T+ TFH G ++ Sbjct: 908 LVNQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAS 942
>RPOC_PELCD (Q3A6Q3) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1396 Score = 47.0 bits (110), Expect = 2e-05 Identities = 20/36 (55%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 LV GE +G +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 901 LVNLGEAVGVIAAQSIGEPGTQLTMRTFHIGGTASR 936
>RPOC_IDILO (Q5QWA4) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1411 Score = 47.0 bits (110), Expect = 2e-05 Identities = 19/36 (52%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 +V GE +G +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 908 MVNQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASR 943
>RPOC_WEIPA (P96178) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) (Fragment) Length = 1054 Score = 47.0 bits (110), Expect = 2e-05 Identities = 21/34 (61%), Positives = 26/34 (76%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 +V GE +G VAAQSIGEP TQ+T+ TFH GV+ Sbjct: 846 VVEVGEAVGTVAAQSIGEPGTQLTMRTFHTGGVA 879
>RPOC_WEIHE (P96177) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) (Fragment) Length = 1046 Score = 47.0 bits (110), Expect = 2e-05 Identities = 21/34 (61%), Positives = 26/34 (76%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 +V GE +G VAAQSIGEP TQ+T+ TFH GV+ Sbjct: 846 VVEVGEAVGTVAAQSIGEPGTQLTMRTFHTGGVA 879
>RPOC_COXBU (Q83ET0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1414 Score = 47.0 bits (110), Expect = 2e-05 Identities = 21/36 (58%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 +V GE IG VAAQSIGEP TQ+T+ TFH G +++ Sbjct: 908 VVNVGEAIGVVAAQSIGEPGTQLTMRTFHIGGAASR 943
>RPOC2_EMIHU (Q4G3A5) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1267 Score = 47.0 bits (110), Expect = 2e-05 Identities = 22/33 (66%), Positives = 25/33 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 LV GE +G VAAQSIGEP TQ+T+ TFH GV Sbjct: 310 LVDLGEAVGIVAAQSIGEPGTQLTMRTFHTGGV 342
>RPOC2_CHAGL (Q8MA10) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1373 Score = 47.0 bits (110), Expect = 2e-05 Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 2/66 (3%) Frame = +2 Query: 260 FASKRVLKEYRLTKESFEWVIGEIE--SRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNT 433 + K +L LT +S +W+ S +V GE +G +A QSIGEP TQ+TL T Sbjct: 280 YQKKAILIRSPLTCKSKQWLCQYCYGWSPCYGDMVELGEAVGIIAGQSIGEPGTQLTLRT 339 Query: 434 FHYAGV 451 FH GV Sbjct: 340 FHTGGV 345
>RPOC_AQUAE (O67763) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1574 Score = 47.0 bits (110), Expect = 2e-05 Identities = 19/36 (52%), Positives = 27/36 (75%) Frame = +2 Query: 347 QSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 + +V+ GE +G +AAQSIGEP TQ+T+ TFH G + Sbjct: 1020 RKIVSVGEAVGIIAAQSIGEPGTQLTMRTFHIGGAA 1055
>RPOC_BROTH (P77839) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) (Fragment) Length = 1053 Score = 47.0 bits (110), Expect = 2e-05 Identities = 22/35 (62%), Positives = 26/35 (74%) Frame = +2 Query: 350 SLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 S V GE +G VAAQSIGEP TQ+T+ TFH GV+ Sbjct: 911 SEVEVGEAVGIVAAQSIGEPGTQLTMRTFHTGGVA 945
>RPOC2_CHLVU (P12465) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1562 Score = 47.0 bits (110), Expect = 2e-05 Identities = 21/33 (63%), Positives = 25/33 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 LV GE +G +AAQSIGEP TQ+T+ TFH GV Sbjct: 358 LVCFGEAVGIIAAQSIGEPGTQLTMRTFHTGGV 390
>RPOC_PARUW (Q6MDM0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1388 Score = 47.0 bits (110), Expect = 2e-05 Identities = 18/34 (52%), Positives = 27/34 (79%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 ++ GE +G +AAQSIGEP TQ+T+ TFH G+++ Sbjct: 908 ISMGEAVGIIAAQSIGEPGTQLTMRTFHLGGIAS 941
>RPOC_SHEON (Q8EK73) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1405 Score = 47.0 bits (110), Expect = 2e-05 Identities = 20/36 (55%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 ++ GE IG VAAQSIGEP TQ+T+ TFH G +++ Sbjct: 908 IINHGEAIGVVAAQSIGEPGTQLTMRTFHIGGAASR 943
>RPOC2_PROMM (Q7V5P3) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1374 Score = 47.0 bits (110), Expect = 2e-05 Identities = 20/30 (66%), Positives = 24/30 (80%) Frame = +2 Query: 365 GEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 GE +G +AAQSIGEP TQ+T+ TFH GVS Sbjct: 349 GEAVGIIAAQSIGEPGTQLTMRTFHTGGVS 378
>RPOC2_SYNEL (Q8DL57) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1324 Score = 47.0 bits (110), Expect = 2e-05 Identities = 21/33 (63%), Positives = 25/33 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 LV GE +G +AAQSIGEP TQ+T+ TFH GV Sbjct: 312 LVDMGEAVGIIAAQSIGEPGTQLTMRTFHTGGV 344
>RPOC_STRCO (Q8CJT1) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1299 Score = 47.0 bits (110), Expect = 2e-05 Identities = 21/34 (61%), Positives = 26/34 (76%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 LV GE +G +AAQSIGEP TQ+T+ TFH GV+ Sbjct: 982 LVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVA 1015
>RPOC_STRAW (Q82DQ4) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1299 Score = 47.0 bits (110), Expect = 2e-05 Identities = 21/34 (61%), Positives = 26/34 (76%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 LV GE +G +AAQSIGEP TQ+T+ TFH GV+ Sbjct: 982 LVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVA 1015
>RPOC_SHISS (Q3YUZ6) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1407 Score = 47.0 bits (110), Expect = 2e-05 Identities = 19/36 (52%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 ++ GE IG +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 908 IINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASR 943
>RPOC_SHIFL (P0A8T9) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1407 Score = 47.0 bits (110), Expect = 2e-05 Identities = 19/36 (52%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 ++ GE IG +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 908 IINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASR 943
>RPOC_SHIDS (Q32AG0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1407 Score = 47.0 bits (110), Expect = 2e-05 Identities = 19/36 (52%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 ++ GE IG +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 908 IINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASR 943
>RPOC_SHIBS (Q31U09) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1407 Score = 47.0 bits (110), Expect = 2e-05 Identities = 19/36 (52%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 ++ GE IG +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 908 IINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASR 943
>RPOC_SALTY (P0A2R4) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1407 Score = 47.0 bits (110), Expect = 2e-05 Identities = 19/36 (52%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 ++ GE IG +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 908 IINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASR 943
>RPOC_SALTI (P0A2R5) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1407 Score = 47.0 bits (110), Expect = 2e-05 Identities = 19/36 (52%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 ++ GE IG +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 908 IINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASR 943
>RPOC_SALPA (Q5PK92) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1407 Score = 47.0 bits (110), Expect = 2e-05 Identities = 19/36 (52%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 ++ GE IG +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 908 IINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASR 943
>RPOC_SALCH (Q57H68) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1407 Score = 47.0 bits (110), Expect = 2e-05 Identities = 19/36 (52%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 ++ GE IG +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 908 IINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASR 943
>RPOC_ERWCT (Q6DAM9) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1407 Score = 47.0 bits (110), Expect = 2e-05 Identities = 19/36 (52%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 ++ GE IG +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 908 IINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASR 943
>RPOC_ECOLI (P0A8T7) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1407 Score = 47.0 bits (110), Expect = 2e-05 Identities = 19/36 (52%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 ++ GE IG +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 908 IINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASR 943
>RPOC_ECOL6 (Q8FB83) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1407 Score = 47.0 bits (110), Expect = 2e-05 Identities = 19/36 (52%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 ++ GE IG +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 908 IINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASR 943
>RPOC_ECO57 (P0A8T8) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1407 Score = 47.0 bits (110), Expect = 2e-05 Identities = 19/36 (52%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 ++ GE IG +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 908 IINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASR 943
>RPOC_ANAMM (Q5PBG3) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1415 Score = 47.0 bits (110), Expect = 2e-05 Identities = 19/36 (52%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 LV+ GE +G +AAQS+GEP TQ+T+ TFH G + + Sbjct: 899 LVSIGEAVGVIAAQSVGEPGTQLTMRTFHVGGTAMR 934
>RPOC_AQUPY (Q9X6Y2) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1576 Score = 47.0 bits (110), Expect = 2e-05 Identities = 19/36 (52%), Positives = 27/36 (75%) Frame = +2 Query: 347 QSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 + +V+ GE +G +AAQSIGEP TQ+T+ TFH G + Sbjct: 1020 RKIVSVGEAVGIIAAQSIGEPGTQLTMRTFHIGGAA 1055
>RPOC2_CYAPA (P48120) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1265 Score = 47.0 bits (110), Expect = 2e-05 Identities = 21/33 (63%), Positives = 25/33 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 LV GE +G +AAQSIGEP TQ+T+ TFH GV Sbjct: 317 LVELGEAVGIIAAQSIGEPGTQLTMRTFHTGGV 349
>RPOC_VIBCH (Q9KV29) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1401 Score = 47.0 bits (110), Expect = 2e-05 Identities = 20/35 (57%), Positives = 26/35 (74%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 LV GE +G +AAQSIGEP TQ+T+ TFH G ++ Sbjct: 908 LVNQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAS 942
>RPOC_STRP3 (Q8K8W2) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1207 Score = 46.6 bits (109), Expect = 3e-05 Identities = 20/34 (58%), Positives = 26/34 (76%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 V GE +G +AAQSIGEP TQ+T+ TFH GV++ Sbjct: 914 VEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAS 947
>RPOC_LACLA (Q9CEN7) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1207 Score = 46.6 bits (109), Expect = 3e-05 Identities = 20/34 (58%), Positives = 26/34 (76%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 V GE +G +AAQSIGEP TQ+T+ TFH GV++ Sbjct: 913 VEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAS 946
>RPOC2_ARATH (P56764) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1376 Score = 46.6 bits (109), Expect = 3e-05 Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Frame = +2 Query: 257 TFASKRVLKEYRLTKESFEWVIGEIESRFLQ--SLVAPGEMIGCVAAQSIGEPATQMTLN 430 TF ++ + T S W+ R LV GE +G +A QSIGEP TQ+TL Sbjct: 279 TFGTQSISIRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLR 338 Query: 431 TFHYAGV 451 TFH GV Sbjct: 339 TFHTGGV 345
>RPOC2_ACOCL (Q3V544) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1386 Score = 46.6 bits (109), Expect = 3e-05 Identities = 28/67 (41%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Frame = +2 Query: 257 TFASKRVLKEYRLTKESFEWVIGEIESRFLQ--SLVAPGEMIGCVAAQSIGEPATQMTLN 430 TF ++ V T S W+ R LV GE +G +A QSIGEP TQ+TL Sbjct: 280 TFRAQPVYIRTPFTCRSTSWICQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLR 339 Query: 431 TFHYAGV 451 TFH GV Sbjct: 340 TFHTGGV 346
>RPOC_MYCPN (P75271) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1290 Score = 46.6 bits (109), Expect = 3e-05 Identities = 21/36 (58%), Positives = 26/36 (72%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 LV G +G +AAQSIGEP TQ+T+ TFH GVS + Sbjct: 1005 LVELGTAVGVIAAQSIGEPGTQLTMRTFHTGGVSTE 1040
>RPOC_HAEI8 (Q4QN34) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1416 Score = 46.6 bits (109), Expect = 3e-05 Identities = 19/35 (54%), Positives = 26/35 (74%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 L+ GE +G +AAQSIGEP TQ+T+ TFH G ++ Sbjct: 909 LINQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAS 943
>RPOC_HAEIN (P43739) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1415 Score = 46.6 bits (109), Expect = 3e-05 Identities = 19/35 (54%), Positives = 26/35 (74%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 L+ GE +G +AAQSIGEP TQ+T+ TFH G ++ Sbjct: 909 LINQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAS 943
>RPOC_CHRVO (Q7NQE7) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1396 Score = 46.6 bits (109), Expect = 3e-05 Identities = 20/35 (57%), Positives = 26/35 (74%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 V GE IG +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 909 VNAGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASR 943
>RPOC_STRPY (P0C0D9) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) (Fragment) Length = 989 Score = 46.6 bits (109), Expect = 3e-05 Identities = 20/34 (58%), Positives = 26/34 (76%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 V GE +G +AAQSIGEP TQ+T+ TFH GV++ Sbjct: 847 VEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAS 880
>RPOC_STRT2 (Q5M2F6) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1212 Score = 46.6 bits (109), Expect = 3e-05 Identities = 20/34 (58%), Positives = 26/34 (76%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 V GE +G +AAQSIGEP TQ+T+ TFH GV++ Sbjct: 914 VEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAS 947
>RPOC_STRT1 (Q5LXV4) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1212 Score = 46.6 bits (109), Expect = 3e-05 Identities = 20/34 (58%), Positives = 26/34 (76%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 V GE +G +AAQSIGEP TQ+T+ TFH GV++ Sbjct: 914 VEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAS 947
>RPOC2_LOTJA (Q9BBS7) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1332 Score = 46.6 bits (109), Expect = 3e-05 Identities = 21/34 (61%), Positives = 25/34 (73%) Frame = +2 Query: 350 SLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 +LV GE +G +A QSIGEP TQ+TL TFH GV Sbjct: 310 NLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGV 343
>RPOC_STRA5 (Q8E238) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1216 Score = 46.6 bits (109), Expect = 3e-05 Identities = 20/34 (58%), Positives = 26/34 (76%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 V GE +G +AAQSIGEP TQ+T+ TFH GV++ Sbjct: 914 VEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAS 947
>RPOC_STRA3 (Q8E7J7) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1216 Score = 46.6 bits (109), Expect = 3e-05 Identities = 20/34 (58%), Positives = 26/34 (76%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 V GE +G +AAQSIGEP TQ+T+ TFH GV++ Sbjct: 914 VEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAS 947
>RPOC_STRA1 (Q3K3L1) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1216 Score = 46.6 bits (109), Expect = 3e-05 Identities = 20/34 (58%), Positives = 26/34 (76%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 V GE +G +AAQSIGEP TQ+T+ TFH GV++ Sbjct: 914 VEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAS 947
>RPOC_PSEHT (Q3ILP8) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1390 Score = 46.6 bits (109), Expect = 3e-05 Identities = 18/36 (50%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 ++ GE +G +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 908 IINAGESVGVIAAQSIGEPGTQLTMRTFHIGGAASR 943
>RPOC2_AMBTC (P60289) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1373 Score = 46.6 bits (109), Expect = 3e-05 Identities = 21/34 (61%), Positives = 25/34 (73%) Frame = +2 Query: 350 SLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 +LV GE +G +A QSIGEP TQ+TL TFH GV Sbjct: 315 NLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGV 348
>RPOC_STRR6 (Q8DNF1) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1225 Score = 46.6 bits (109), Expect = 3e-05 Identities = 20/34 (58%), Positives = 26/34 (76%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 V GE +G +AAQSIGEP TQ+T+ TFH GV++ Sbjct: 913 VEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAS 946
>RPOC_STRPN (Q97NQ8) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1225 Score = 46.6 bits (109), Expect = 3e-05 Identities = 20/34 (58%), Positives = 26/34 (76%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 V GE +G +AAQSIGEP TQ+T+ TFH GV++ Sbjct: 913 VEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAS 946
>RPOC2_ASTLO (P58132) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 817 Score = 46.6 bits (109), Expect = 3e-05 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 +V GE IG +AAQSIGEP TQ+T+ TFH G+ Sbjct: 311 IVELGETIGTIAAQSIGEPGTQLTMRTFHLGGI 343
>RPOC_STRPM (Q48VR0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1213 Score = 46.6 bits (109), Expect = 3e-05 Identities = 20/34 (58%), Positives = 26/34 (76%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 V GE +G +AAQSIGEP TQ+T+ TFH GV++ Sbjct: 914 VEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAS 947
>RPOC_STRP8 (Q8P2Y2) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1213 Score = 46.6 bits (109), Expect = 3e-05 Identities = 20/34 (58%), Positives = 26/34 (76%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 V GE +G +AAQSIGEP TQ+T+ TFH GV++ Sbjct: 914 VEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAS 947
>RPOC_STRP6 (Q5XE96) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1213 Score = 46.6 bits (109), Expect = 3e-05 Identities = 20/34 (58%), Positives = 26/34 (76%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 V GE +G +AAQSIGEP TQ+T+ TFH GV++ Sbjct: 914 VEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAS 947
>RPOC_STRP1 (P0C0E0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1213 Score = 46.6 bits (109), Expect = 3e-05 Identities = 20/34 (58%), Positives = 26/34 (76%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 V GE +G +AAQSIGEP TQ+T+ TFH GV++ Sbjct: 914 VEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAS 947
>RPOC_STRMU (Q8DS47) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1209 Score = 46.6 bits (109), Expect = 3e-05 Identities = 20/34 (58%), Positives = 26/34 (76%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 V GE +G +AAQSIGEP TQ+T+ TFH GV++ Sbjct: 914 VEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAS 947
>RPOC_MANSM (Q65W40) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1420 Score = 46.6 bits (109), Expect = 3e-05 Identities = 19/35 (54%), Positives = 26/35 (74%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 L+ GE +G +AAQSIGEP TQ+T+ TFH G ++ Sbjct: 909 LINQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAS 943
>RPOC_HAEDU (Q7VKL8) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1420 Score = 46.6 bits (109), Expect = 3e-05 Identities = 19/35 (54%), Positives = 26/35 (74%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 L+ GE +G +AAQSIGEP TQ+T+ TFH G ++ Sbjct: 909 LINQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAS 943
>RPOC2_GLOVI (Q7NDF7) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1262 Score = 46.6 bits (109), Expect = 3e-05 Identities = 21/33 (63%), Positives = 25/33 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 LV GE +G +AAQSIGEP TQ+T+ TFH GV Sbjct: 314 LVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGV 346
>RPOC2_ADICA (Q85FM9) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1420 Score = 46.6 bits (109), Expect = 3e-05 Identities = 21/34 (61%), Positives = 25/34 (73%) Frame = +2 Query: 350 SLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 +LV GE +G +A QSIGEP TQ+TL TFH GV Sbjct: 314 NLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGV 347
>RPOC_PASMU (Q9CK92) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1417 Score = 46.6 bits (109), Expect = 3e-05 Identities = 19/35 (54%), Positives = 26/35 (74%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 457 L+ GE +G +AAQSIGEP TQ+T+ TFH G ++ Sbjct: 909 LINQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAS 943
>RPOC_MYCGE (P47582) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1292 Score = 46.6 bits (109), Expect = 3e-05 Identities = 21/36 (58%), Positives = 26/36 (72%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 LV G +G +AAQSIGEP TQ+T+ TFH GVS + Sbjct: 1007 LVELGTAVGVIAAQSIGEPGTQLTMRTFHTGGVSTE 1042
>RPOC_YERPS (Q66FQ1) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1406 Score = 46.6 bits (109), Expect = 3e-05 Identities = 18/36 (50%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 ++ GE +G +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 908 IINKGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASR 943
>RPOC_YERPE (Q8D1H3) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1406 Score = 46.6 bits (109), Expect = 3e-05 Identities = 18/36 (50%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 ++ GE +G +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 908 IINKGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASR 943
>RPOC_PHOLL (Q7N9A3) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1406 Score = 46.6 bits (109), Expect = 3e-05 Identities = 18/36 (50%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 ++ GE +G +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 908 IINKGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASR 943
>RPOC2_ORYSA (P12093) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1513 Score = 46.2 bits (108), Expect = 4e-05 Identities = 21/33 (63%), Positives = 24/33 (72%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 LV GE +G +A QSIGEP TQ+TL TFH GV Sbjct: 316 LVELGEAVGVIAGQSIGEPGTQLTLRTFHTGGV 348
>RPOC2_ORYNI (Q6ENI2) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1513 Score = 46.2 bits (108), Expect = 4e-05 Identities = 21/33 (63%), Positives = 24/33 (72%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 LV GE +G +A QSIGEP TQ+TL TFH GV Sbjct: 316 LVELGEAVGVIAGQSIGEPGTQLTLRTFHTGGV 348
>RPOC_DESVH (Q727C6) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1385 Score = 46.2 bits (108), Expect = 4e-05 Identities = 19/36 (52%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 +V GE +G +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 903 IVNIGETVGIIAAQSIGEPGTQLTMRTFHIGGTASR 938
>RPOC2_SOLTU (Q2VEI6) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1392 Score = 46.2 bits (108), Expect = 4e-05 Identities = 21/33 (63%), Positives = 24/33 (72%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 LV GE +G +A QSIGEP TQ+TL TFH GV Sbjct: 315 LVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGV 347
>RPOC2_NICTO (Q33C48) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1392 Score = 46.2 bits (108), Expect = 4e-05 Identities = 21/33 (63%), Positives = 24/33 (72%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 LV GE +G +A QSIGEP TQ+TL TFH GV Sbjct: 315 LVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGV 347
>RPOC2_NICSY (Q3C1G9) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1392 Score = 46.2 bits (108), Expect = 4e-05 Identities = 21/33 (63%), Positives = 24/33 (72%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 LV GE +G +A QSIGEP TQ+TL TFH GV Sbjct: 315 LVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGV 347
>RPOC2_EUCGG (Q49L08) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1392 Score = 46.2 bits (108), Expect = 4e-05 Identities = 21/33 (63%), Positives = 24/33 (72%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 LV GE +G +A QSIGEP TQ+TL TFH GV Sbjct: 315 LVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGV 347
>RPOC_OCEIH (Q8ETY7) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1203 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 V GE +G +AAQSIGEP TQ+T+ TFH GV+ Sbjct: 913 VEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVA 945
>RPOC_BACHK (Q6HPR5) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1203 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 V GE +G +AAQSIGEP TQ+T+ TFH GV+ Sbjct: 913 VEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVA 945
>RPOC_BACCZ (Q63H97) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1203 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 V GE +G +AAQSIGEP TQ+T+ TFH GV+ Sbjct: 913 VEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVA 945
>RPOC_BACCR (Q81J47) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1203 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 V GE +G +AAQSIGEP TQ+T+ TFH GV+ Sbjct: 913 VEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVA 945
>RPOC_BACC1 (Q73FA3) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1203 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 V GE +G +AAQSIGEP TQ+T+ TFH GV+ Sbjct: 913 VEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVA 945
>RPOC_BACAN (P77819) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1203 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 V GE +G +AAQSIGEP TQ+T+ TFH GV+ Sbjct: 913 VEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVA 945
>RPOC_MYCS5 (Q4A5S8) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1492 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/34 (58%), Positives = 26/34 (76%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 +V GE +G +AAQSIGEP TQ+T+ TFH GV+ Sbjct: 1127 IVNIGEAVGVIAAQSIGEPGTQLTMRTFHTGGVA 1160
>RPOC_METCA (Q60A05) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1400 Score = 46.2 bits (108), Expect = 4e-05 Identities = 19/32 (59%), Positives = 25/32 (78%) Frame = +2 Query: 365 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 GE IG +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 912 GEAIGVIAAQSIGEPGTQLTMRTFHIGGAASR 943
>RPOC_CORGL (Q8NT25) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1333 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/29 (68%), Positives = 23/29 (79%) Frame = +2 Query: 365 GEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 GE +G VAAQSIGEP TQ+T+ TFH GV Sbjct: 1007 GEAVGIVAAQSIGEPGTQLTMRTFHQGGV 1035
>RPOC_COREF (Q8FS96) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1333 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/29 (68%), Positives = 23/29 (79%) Frame = +2 Query: 365 GEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 GE +G VAAQSIGEP TQ+T+ TFH GV Sbjct: 1007 GEAVGIVAAQSIGEPGTQLTMRTFHQGGV 1035
>RPOC_BORPE (Q7W0R8) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1414 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/37 (54%), Positives = 27/37 (72%) Frame = +2 Query: 350 SLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 S V GE +G +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 907 SHVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASR 943
>RPOC_BORPA (Q7W2G8) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1414 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/37 (54%), Positives = 27/37 (72%) Frame = +2 Query: 350 SLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 S V GE +G +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 907 SHVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASR 943
>RPOC_BORBR (Q7WRD8) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1414 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/37 (54%), Positives = 27/37 (72%) Frame = +2 Query: 350 SLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 S V GE +G +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 907 SHVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASR 943
>RPOC_GEOKA (Q5L404) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1199 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 V GE +G +AAQSIGEP TQ+T+ TFH GV+ Sbjct: 913 VEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVA 945
>RPOC_BACSU (P37871) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1199 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 V GE +G +AAQSIGEP TQ+T+ TFH GV+ Sbjct: 913 VEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVA 945
>RPOC_BACLD (Q65PB4) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1199 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 V GE +G +AAQSIGEP TQ+T+ TFH GV+ Sbjct: 913 VEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVA 945
>RPOC2_PHYPA (P60290) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1330 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/34 (58%), Positives = 25/34 (73%) Frame = +2 Query: 350 SLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 +L+ GE +G +A QSIGEP TQ+TL TFH GV Sbjct: 301 NLIELGEAVGIIAGQSIGEPGTQLTLRTFHTGGV 334
>RPOC2_ANTFO (Q85C71) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1445 Score = 46.2 bits (108), Expect = 4e-05 Identities = 21/33 (63%), Positives = 24/33 (72%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 LV GE +G +A QSIGEP TQ+TL TFH GV Sbjct: 314 LVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGV 346
>RPOC2_SILLA (Q589B8) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1373 Score = 46.2 bits (108), Expect = 4e-05 Identities = 21/33 (63%), Positives = 24/33 (72%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 LV GE +G +A QSIGEP TQ+TL TFH GV Sbjct: 311 LVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGV 343
>RPOC2_ATRBE (Q8S8Y1) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1389 Score = 46.2 bits (108), Expect = 4e-05 Identities = 21/33 (63%), Positives = 24/33 (72%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 LV GE +G +A QSIGEP TQ+TL TFH GV Sbjct: 315 LVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGV 347
>RPOC_NITOC (Q3J8Q8) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1403 Score = 46.2 bits (108), Expect = 4e-05 Identities = 19/32 (59%), Positives = 25/32 (78%) Frame = +2 Query: 365 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 GE IG +AAQSIGEP TQ+T+ TFH G +++ Sbjct: 912 GEAIGVIAAQSIGEPGTQLTMRTFHIGGAASR 943
>RPOC2_WHEAT (Q9XPS9) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1479 Score = 46.2 bits (108), Expect = 4e-05 Identities = 21/33 (63%), Positives = 24/33 (72%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 LV GE +G +A QSIGEP TQ+TL TFH GV Sbjct: 316 LVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGV 348
>RPOC_TREDE (Q73JJ8) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1424 Score = 46.2 bits (108), Expect = 4e-05 Identities = 19/36 (52%), Positives = 27/36 (75%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 460 +V GE +G +AAQSIG+P TQ+T+ TFH G ++K Sbjct: 877 IVRIGEAVGIIAAQSIGQPGTQLTMRTFHEGGTASK 912
>RPOC_THETN (Q8R7U7) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1183 Score = 46.2 bits (108), Expect = 4e-05 Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%) Frame = +2 Query: 146 EAIDKLQERL--KVVPGDDAMSIEAQKNATLFFNILLRSTFASK-------RVLKEYRLT 298 E I+KL +R+ ++ D ++++ N + N ++ A K RV LT Sbjct: 810 EIIEKLSDRIIGRIAAED---IVDSEGNVIVRRNEMINEEEAEKIDKAGITRVKIRSPLT 866 Query: 299 KESFEWVIGEIESRFLQS--LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 S V R L + LV GE +G +AAQ+IGEP TQ+T+ TFH GV+ Sbjct: 867 CRSRHGVCRMCYGRDLATGELVNIGEAVGIIAAQAIGEPGTQLTMRTFHTGGVA 920
>RPOC2_SINAL (Q9THV5) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1384 Score = 46.2 bits (108), Expect = 4e-05 Identities = 21/33 (63%), Positives = 24/33 (72%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 LV GE +G +A QSIGEP TQ+TL TFH GV Sbjct: 317 LVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGV 349
>RPOC_STAAU (P47770) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) (Fragment) Length = 1140 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 V GE +G +AAQSIGEP TQ+T+ TFH GV+ Sbjct: 917 VEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVA 949
>RPOC_LISGR (P77882) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) (Fragment) Length = 1053 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 V GE +G +AAQSIGEP TQ+T+ TFH GV+ Sbjct: 913 VEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVA 945
>RPOC_CORJK (Q4JT33) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1323 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/29 (68%), Positives = 23/29 (79%) Frame = +2 Query: 365 GEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 GE +G VAAQSIGEP TQ+T+ TFH GV Sbjct: 1001 GEAVGIVAAQSIGEPGTQLTMRTFHLGGV 1029
>RPOC_CLOPE (Q93R87) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1178 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/30 (66%), Positives = 24/30 (80%) Frame = +2 Query: 365 GEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 GE +G VAAQSIGEP TQ+T+ TFH GV+ Sbjct: 893 GEAVGIVAAQSIGEPGTQLTMRTFHTGGVA 922
>RPOC2_CUCSA (Q4VZP3) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1394 Score = 46.2 bits (108), Expect = 4e-05 Identities = 21/33 (63%), Positives = 24/33 (72%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 LV GE +G +A QSIGEP TQ+TL TFH GV Sbjct: 315 LVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGV 347
>RPOC_ENTFA (Q82Z41) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1217 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 V GE +G +AAQSIGEP TQ+T+ TFH GV+ Sbjct: 913 VEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVA 945
>RPOC2_MAIZE (P16025) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1527 Score = 46.2 bits (108), Expect = 4e-05 Identities = 21/33 (63%), Positives = 24/33 (72%) Frame = +2 Query: 353 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV 451 LV GE +G +A QSIGEP TQ+TL TFH GV Sbjct: 316 LVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGV 348
>RPOC_STAS1 (Q49V53) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1207 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 V GE +G +AAQSIGEP TQ+T+ TFH GV+ Sbjct: 917 VEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVA 949
>RPOC_STAES (Q8CQ83) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1207 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 V GE +G +AAQSIGEP TQ+T+ TFH GV+ Sbjct: 917 VEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVA 949
>RPOC_STAEQ (Q5HRK9) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1207 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 V GE +G +AAQSIGEP TQ+T+ TFH GV+ Sbjct: 917 VEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVA 949
>RPOC_STAAW (P60286) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1207 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 V GE +G +AAQSIGEP TQ+T+ TFH GV+ Sbjct: 917 VEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVA 949
>RPOC_STAAS (Q6GBU4) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1207 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 V GE +G +AAQSIGEP TQ+T+ TFH GV+ Sbjct: 917 VEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVA 949
>RPOC_STAAR (Q6GJC5) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1207 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 V GE +G +AAQSIGEP TQ+T+ TFH GV+ Sbjct: 917 VEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVA 949
>RPOC_STAAN (P60285) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1207 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 V GE +G +AAQSIGEP TQ+T+ TFH GV+ Sbjct: 917 VEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVA 949
>RPOC_STAAM (P60284) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1207 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 V GE +G +AAQSIGEP TQ+T+ TFH GV+ Sbjct: 917 VEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVA 949
>RPOC_STAAC (Q5HID2) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1207 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = +2 Query: 356 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS 454 V GE +G +AAQSIGEP TQ+T+ TFH GV+ Sbjct: 917 VEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVA 949 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,710,751 Number of Sequences: 219361 Number of extensions: 1224290 Number of successful extensions: 3978 Number of sequences better than 10.0: 362 Number of HSP's better than 10.0 without gapping: 3821 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3974 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
