ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl31d05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_467429.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3201 Score = 317 bits (160), Expect = 2e-83 Identities = 244/272 (89%) Strand = Plus / Plus Query: 166 gcggtggcgagcatcgacctgggctccgagtggctcaaggtcgcggccgtgcacctcgcg 225 ||||||||||||||||||||||| || |||||||||||||| || |||||||||||||| Sbjct: 235 gcggtggcgagcatcgacctggggtcggagtggctcaaggtggccgccgtgcacctcgcc 294 Query: 226 ccgggccgcgccccgatcgccgtcgccatcaacgagatgtccaagcgcaagtcccccgcg 285 || || |||| ||||||||| || ||||||||||||||||| |||||||||||||| ||| Sbjct: 295 cccggacgcgtcccgatcgcggtggccatcaacgagatgtcgaagcgcaagtccccggcg 354 Query: 286 ctcgccgcgctggccgacggcaaccgcctcgccggcgaggaggcggccggcatcaccgcg 345 ||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 355 ctcgccgcgctcgccgacggcaaccggctcgccggcgaggaggcgtccggcatcaccgcg 414 Query: 346 cgccacccggccaaggtcttctcccgcatgcgcgacctcctcgccaagcccttcccctac 405 ||||||||| ||||||| ||| ||||| ||| ||||||||||| ||||||||||||||| Sbjct: 415 cgccacccgtccaaggtgttcgcccgcgcgcgggacctcctcgcgaagcccttcccctac 474 Query: 406 gcgcgggccctcgccgactcgctcttcctccc 437 | |||| || |||| || ||||||||||||| Sbjct: 475 gtgcggtccgtcgcggaggcgctcttcctccc 506
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 317 bits (160), Expect = 2e-83 Identities = 244/272 (89%) Strand = Plus / Plus Query: 166 gcggtggcgagcatcgacctgggctccgagtggctcaaggtcgcggccgtgcacctcgcg 225 ||||||||||||||||||||||| || |||||||||||||| || |||||||||||||| Sbjct: 29470665 gcggtggcgagcatcgacctggggtcggagtggctcaaggtggccgccgtgcacctcgcc 29470724 Query: 226 ccgggccgcgccccgatcgccgtcgccatcaacgagatgtccaagcgcaagtcccccgcg 285 || || |||| ||||||||| || ||||||||||||||||| |||||||||||||| ||| Sbjct: 29470725 cccggacgcgtcccgatcgcggtggccatcaacgagatgtcgaagcgcaagtccccggcg 29470784 Query: 286 ctcgccgcgctggccgacggcaaccgcctcgccggcgaggaggcggccggcatcaccgcg 345 ||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 29470785 ctcgccgcgctcgccgacggcaaccggctcgccggcgaggaggcgtccggcatcaccgcg 29470844 Query: 346 cgccacccggccaaggtcttctcccgcatgcgcgacctcctcgccaagcccttcccctac 405 ||||||||| ||||||| ||| ||||| ||| ||||||||||| ||||||||||||||| Sbjct: 29470845 cgccacccgtccaaggtgttcgcccgcgcgcgggacctcctcgcgaagcccttcccctac 29470904 Query: 406 gcgcgggccctcgccgactcgctcttcctccc 437 | |||| || |||| || ||||||||||||| Sbjct: 29470905 gtgcggtccgtcgcggaggcgctcttcctccc 29470936
>dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1038_A06 Length = 147836 Score = 317 bits (160), Expect = 2e-83 Identities = 244/272 (89%) Strand = Plus / Plus Query: 166 gcggtggcgagcatcgacctgggctccgagtggctcaaggtcgcggccgtgcacctcgcg 225 ||||||||||||||||||||||| || |||||||||||||| || |||||||||||||| Sbjct: 65695 gcggtggcgagcatcgacctggggtcggagtggctcaaggtggccgccgtgcacctcgcc 65754 Query: 226 ccgggccgcgccccgatcgccgtcgccatcaacgagatgtccaagcgcaagtcccccgcg 285 || || |||| ||||||||| || ||||||||||||||||| |||||||||||||| ||| Sbjct: 65755 cccggacgcgtcccgatcgcggtggccatcaacgagatgtcgaagcgcaagtccccggcg 65814 Query: 286 ctcgccgcgctggccgacggcaaccgcctcgccggcgaggaggcggccggcatcaccgcg 345 ||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 65815 ctcgccgcgctcgccgacggcaaccggctcgccggcgaggaggcgtccggcatcaccgcg 65874 Query: 346 cgccacccggccaaggtcttctcccgcatgcgcgacctcctcgccaagcccttcccctac 405 ||||||||| ||||||| ||| ||||| ||| ||||||||||| ||||||||||||||| Sbjct: 65875 cgccacccgtccaaggtgttcgcccgcgcgcgggacctcctcgcgaagcccttcccctac 65934 Query: 406 gcgcgggccctcgccgactcgctcttcctccc 437 | |||| || |||| || ||||||||||||| Sbjct: 65935 gtgcggtccgtcgcggaggcgctcttcctccc 65966
>dbj|AP004161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1311_H06 Length = 139868 Score = 317 bits (160), Expect = 2e-83 Identities = 244/272 (89%) Strand = Plus / Plus Query: 166 gcggtggcgagcatcgacctgggctccgagtggctcaaggtcgcggccgtgcacctcgcg 225 ||||||||||||||||||||||| || |||||||||||||| || |||||||||||||| Sbjct: 121537 gcggtggcgagcatcgacctggggtcggagtggctcaaggtggccgccgtgcacctcgcc 121596 Query: 226 ccgggccgcgccccgatcgccgtcgccatcaacgagatgtccaagcgcaagtcccccgcg 285 || || |||| ||||||||| || ||||||||||||||||| |||||||||||||| ||| Sbjct: 121597 cccggacgcgtcccgatcgcggtggccatcaacgagatgtcgaagcgcaagtccccggcg 121656 Query: 286 ctcgccgcgctggccgacggcaaccgcctcgccggcgaggaggcggccggcatcaccgcg 345 ||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 121657 ctcgccgcgctcgccgacggcaaccggctcgccggcgaggaggcgtccggcatcaccgcg 121716 Query: 346 cgccacccggccaaggtcttctcccgcatgcgcgacctcctcgccaagcccttcccctac 405 ||||||||| ||||||| ||| ||||| ||| ||||||||||| ||||||||||||||| Sbjct: 121717 cgccacccgtccaaggtgttcgcccgcgcgcgggacctcctcgcgaagcccttcccctac 121776 Query: 406 gcgcgggccctcgccgactcgctcttcctccc 437 | |||| || |||| || ||||||||||||| Sbjct: 121777 gtgcggtccgtcgcggaggcgctcttcctccc 121808
>dbj|AK100997.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023146N12, full insert sequence Length = 3201 Score = 317 bits (160), Expect = 2e-83 Identities = 244/272 (89%) Strand = Plus / Plus Query: 166 gcggtggcgagcatcgacctgggctccgagtggctcaaggtcgcggccgtgcacctcgcg 225 ||||||||||||||||||||||| || |||||||||||||| || |||||||||||||| Sbjct: 235 gcggtggcgagcatcgacctggggtcggagtggctcaaggtggccgccgtgcacctcgcc 294 Query: 226 ccgggccgcgccccgatcgccgtcgccatcaacgagatgtccaagcgcaagtcccccgcg 285 || || |||| ||||||||| || ||||||||||||||||| |||||||||||||| ||| Sbjct: 295 cccggacgcgtcccgatcgcggtggccatcaacgagatgtcgaagcgcaagtccccggcg 354 Query: 286 ctcgccgcgctggccgacggcaaccgcctcgccggcgaggaggcggccggcatcaccgcg 345 ||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 355 ctcgccgcgctcgccgacggcaaccggctcgccggcgaggaggcgtccggcatcaccgcg 414 Query: 346 cgccacccggccaaggtcttctcccgcatgcgcgacctcctcgccaagcccttcccctac 405 ||||||||| ||||||| ||| ||||| ||| ||||||||||| ||||||||||||||| Sbjct: 415 cgccacccgtccaaggtgttcgcccgcgcgcgggacctcctcgcgaagcccttcccctac 474 Query: 406 gcgcgggccctcgccgactcgctcttcctccc 437 | |||| || |||| || ||||||||||||| Sbjct: 475 gtgcggtccgtcgcggaggcgctcttcctccc 506
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 123 cgccctcgtcgcggcggccgtggccg 148 |||||||||||||||||||||||||| Sbjct: 23156 cgccctcgtcgcggcggccgtggccg 23131
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Minus Query: 328 gcggccggcatcaccgcgcgcca 350 ||||||||||||||||||||||| Sbjct: 4951458 gcggccggcatcaccgcgcgcca 4951436
>gb|AE004715.1| Pseudomonas aeruginosa PAO1, section 276 of 529 of the complete genome Length = 10189 Score = 46.1 bits (23), Expect = 0.096 Identities = 29/31 (93%) Strand = Plus / Minus Query: 138 ggccgtggccgtgccgccggcgagcgccgcg 168 |||| |||||| ||||||||||||||||||| Sbjct: 8570 ggccatggccgcgccgccggcgagcgccgcg 8540
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 46.1 bits (23), Expect = 0.096 Identities = 32/35 (91%) Strand = Plus / Plus Query: 132 cgcggcggccgtggccgtgccgccggcgagcgccg 166 |||||||||||||||| |||||| ||| ||||||| Sbjct: 1961565 cgcggcggccgtggccctgccgctggccagcgccg 1961599
>ref|NM_188531.1| Oryza sativa (japonica cultivar-group), Ozsa8200 predicted mRNA Length = 1122 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 132 cgcggcggccgtggccgtgccgccgg 157 ||||||||| |||||||||||||||| Sbjct: 270 cgcggcggcggtggccgtgccgccgg 295
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 281 ccgcgctcgccgcgctggccgacggc 306 ||||||||||||||||| |||||||| Sbjct: 2884535 ccgcgctcgccgcgctgcccgacggc 2884560 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 cggcgagcgccgcggtggcg 174 |||||||||||||||||||| Sbjct: 3241233 cggcgagcgccgcggtggcg 3241214 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 147 cgtgccgccggcgagcgccgcggtggcg 174 |||||||| |||| |||||||||||||| Sbjct: 28102 cgtgccgctggcgggcgccgcggtggcg 28129
>ref|XM_472588.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1281 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 125 ccctcgtcgcggcggccgtggc 146 |||||||||||||||||||||| Sbjct: 712 ccctcgtcgcggcggccgtggc 691
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 342 cgcgcgccacccggccaaggtcttctcccgcatg 375 ||||||||| |||| |||||| |||||||||||| Sbjct: 1284686 cgcgcgccatccggacaaggtgttctcccgcatg 1284719 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 286 ctcgccgcgctggccgacggcaaccgcctcgccg 319 ||||||||||||||| |||||| |||||| |||| Sbjct: 351092 ctcgccgcgctggcccacggcatccgcctggccg 351059
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 287 tcgccgcgctggccgacggcaa 308 |||||||||||||||||||||| Sbjct: 4490242 tcgccgcgctggccgacggcaa 4490221
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 125 ccctcgtcgcggcggccgtggc 146 |||||||||||||||||||||| Sbjct: 21755213 ccctcgtcgcggcggccgtggc 21755192
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 132 cgcggcggccgtggccgtgccgccgg 157 ||||||||| |||||||||||||||| Sbjct: 6813360 cgcggcggcggtggccgtgccgccgg 6813385 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 119 tcctcgccctcgtcgcggcggccgt 143 |||||||||||| |||||||||||| Sbjct: 19055464 tcctcgccctcgccgcggcggccgt 19055488 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 cggcaaccgcctcgccggcg 322 |||||||||||||||||||| Sbjct: 7081663 cggcaaccgcctcgccggcg 7081682
>gb|AE004776.1| Pseudomonas aeruginosa PAO1, section 337 of 529 of the complete genome Length = 11673 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 281 ccgcgctcgccgcgctggccga 302 |||||||||||||||||||||| Sbjct: 5763 ccgcgctcgccgcgctggccga 5742
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E05 Length = 176935 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 132 cgcggcggccgtggccgtgccgccgg 157 ||||||||| |||||||||||||||| Sbjct: 165512 cgcggcggcggtggccgtgccgccgg 165537
>dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0417G05 Length = 147803 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 132 cgcggcggccgtggccgtgccgccgg 157 ||||||||| |||||||||||||||| Sbjct: 95421 cgcggcggcggtggccgtgccgccgg 95446
>dbj|AK121647.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058N21, full insert sequence Length = 1800 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 125 ccctcgtcgcggcggccgtggc 146 |||||||||||||||||||||| Sbjct: 1112 ccctcgtcgcggcggccgtggc 1091
>dbj|AK106517.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-B02, full insert sequence Length = 1817 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 132 cgcggcggccgtggccgtgccgccgg 157 ||||||||| |||||||||||||||| Sbjct: 642 cgcggcggcggtggccgtgccgccgg 667
>dbj|AK101054.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033015K21, full insert sequence Length = 1560 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 132 cgcggcggccgtggccgtgccgccgg 157 ||||||||| |||||||||||||||| Sbjct: 408 cgcggcggcggtggccgtgccgccgg 433
>emb|AL606592.2|OSJN00024 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006B20, complete sequence Length = 141915 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 125 ccctcgtcgcggcggccgtggc 146 |||||||||||||||||||||| Sbjct: 66830 ccctcgtcgcggcggccgtggc 66809
>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome Length = 4222334 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 gcggccgtggccgtgccgccg 156 ||||||||||||||||||||| Sbjct: 569278 gcggccgtggccgtgccgccg 569298
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 281 ccgcgctcgccgcgctggccg 301 ||||||||||||||||||||| Sbjct: 2943634 ccgcgctcgccgcgctggccg 2943614 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gcgctcgccgcgctggccgac 303 ||||||||||||||||||||| Sbjct: 2856828 gcgctcgccgcgctggccgac 2856808
>ref|NM_193176.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1437 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 119 tcctcgccctcgtcgcggcggccgt 143 |||||||||||| |||||||||||| Sbjct: 44 tcctcgccctcgccgcggcggccgt 68
>gb|AE017356.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 14, complete sequence Length = 762694 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 gtggcgagcatcgacctgggc 189 ||||||||||||||||||||| Sbjct: 551153 gtggcgagcatcgacctgggc 551173
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0097K08 map C827S, complete sequence Length = 137870 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 308 accgcctcgccggcgaggaggcggc 332 ||||||||| ||||||||||||||| Sbjct: 43657 accgcctcggcggcgaggaggcggc 43681
>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0026P08 map near C827S, complete sequence Length = 148676 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 308 accgcctcgccggcgaggaggcggc 332 ||||||||| ||||||||||||||| Sbjct: 52118 accgcctcggcggcgaggaggcggc 52094
>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome Length = 4222645 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 gcggccgtggccgtgccgccg 156 ||||||||||||||||||||| Sbjct: 569094 gcggccgtggccgtgccgccg 569114
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 324 ggaggcggccggcatcaccgc 344 ||||||||||||||||||||| Sbjct: 1624218 ggaggcggccggcatcaccgc 1624238 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 tgccgccggcgagcgccgcgg 169 ||||||||||||||||||||| Sbjct: 479867 tgccgccggcgagcgccgcgg 479847
>gb|DQ013294.1| Polyangium cellulosum strain So ce12 disorazole biosynthesis gene cluster, complete sequence Length = 84868 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 280 cccgcgctcgccgcgctggccgacg 304 |||||||||||||||||| |||||| Sbjct: 83527 cccgcgctcgccgcgctgcccgacg 83551
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 287 tcgccgcgctggccgacggca 307 ||||||||||||||||||||| Sbjct: 769362 tcgccgcgctggccgacggca 769382
>emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genome; segment 11/16 Length = 349635 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 287 tcgccgcgctggccgacggca 307 ||||||||||||||||||||| Sbjct: 199733 tcgccgcgctggccgacggca 199713
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 324 ggaggcggccggcatcaccgc 344 ||||||||||||||||||||| Sbjct: 2959550 ggaggcggccggcatcaccgc 2959570 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 tgccgccggcgagcgccgcgg 169 ||||||||||||||||||||| Sbjct: 1799257 tgccgccggcgagcgccgcgg 1799237
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 276 gtcccccgcgctcgccgcgctggcc 300 |||| |||||||||||||||||||| Sbjct: 58323 gtcctccgcgctcgccgcgctggcc 58299
>gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequence Length = 505334 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 303 cggcaaccgcctcgccggcga 323 ||||||||||||||||||||| Sbjct: 430241 cggcaaccgcctcgccggcga 430261
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 153 gccggcgagcgccgcggtggcgagc 177 |||||||||||||||| |||||||| Sbjct: 557157 gccggcgagcgccgcgatggcgagc 557181 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 tcgccgtcgccatcaacgag 261 |||||||||||||||||||| Sbjct: 2342704 tcgccgtcgccatcaacgag 2342723
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 tgccgccggcgagcgccgcgg 169 ||||||||||||||||||||| Sbjct: 984780 tgccgccggcgagcgccgcgg 984800
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 308 accgcctcgccggcgaggaggcggc 332 ||||||||| ||||||||||||||| Sbjct: 7138898 accgcctcggcggcgaggaggcggc 7138874
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 ctcctgctcctcgccctcgtc 132 ||||||||||||||||||||| Sbjct: 26574931 ctcctgctcctcgccctcgtc 26574911 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 gcggcggccgtggccgtgccgccg 156 |||||||||| ||||||||||||| Sbjct: 6965044 gcggcggccggggccgtgccgccg 6965021
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 122 tcgccctcgtcgcggcggccgtggc 146 |||||||||||||||||||| |||| Sbjct: 565159 tcgccctcgtcgcggcggccctggc 565183
>dbj|AP003350.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0702H08 Length = 166899 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 119 tcctcgccctcgtcgcggcggccgt 143 |||||||||||| |||||||||||| Sbjct: 20881 tcctcgccctcgccgcggcggccgt 20905
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 123 cgccctcgtcgcggcggccgt 143 ||||||||||||||||||||| Sbjct: 3862737 cgccctcgtcgcggcggccgt 3862717 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 276 gtcccccgcgctcgccgcgct 296 ||||||||||||||||||||| Sbjct: 2182727 gtcccccgcgctcgccgcgct 2182707 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 tgccgccggcgagcgccgcg 168 |||||||||||||||||||| Sbjct: 8742906 tgccgccggcgagcgccgcg 8742887 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 cggcgagcgccgcggtggcg 174 |||||||||||||||||||| Sbjct: 2682573 cggcgagcgccgcggtggcg 2682554
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 cgaggaggcggccggcatcac 341 ||||||||||||||||||||| Sbjct: 782531 cgaggaggcggccggcatcac 782511 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 cgcgctcgccgcgctggccg 301 |||||||||||||||||||| Sbjct: 4644587 cgcgctcgccgcgctggccg 4644568 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 gcctcgccggcgaggaggcg 330 |||||||||||||||||||| Sbjct: 3628239 gcctcgccggcgaggaggcg 3628220 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 gcgctcgccgcgctggccga 302 |||||||||||||||||||| Sbjct: 3595630 gcgctcgccgcgctggccga 3595649 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 cacctcgcgccgggccgcgc 236 |||||||||||||||||||| Sbjct: 3037224 cacctcgcgccgggccgcgc 3037243
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 281 ccgcgctcgccgcgctggccg 301 ||||||||||||||||||||| Sbjct: 2355652 ccgcgctcgccgcgctggccg 2355632 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 cgcgctcgccgcgctggccg 301 |||||||||||||||||||| Sbjct: 2066856 cgcgctcgccgcgctggccg 2066837 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 gcggcggccgtggccgtgccgccg 156 ||||| |||||||||||||||||| Sbjct: 1803008 gcggccgccgtggccgtgccgccg 1802985
>dbj|AP003712.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0460H04 Length = 166490 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 ctcctgctcctcgccctcgtc 132 ||||||||||||||||||||| Sbjct: 108584 ctcctgctcctcgccctcgtc 108564
>dbj|AK109762.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-G11, full insert sequence Length = 1040 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 ctcctgctcctcgccctcgtc 132 ||||||||||||||||||||| Sbjct: 39 ctcctgctcctcgccctcgtc 59
>dbj|AK101002.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023147G07, full insert sequence Length = 1933 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 119 tcctcgccctcgtcgcggcggccgt 143 |||||||||||| |||||||||||| Sbjct: 120 tcctcgccctcgccgcggcggccgt 144
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 324 ggaggcggccggcatcaccgc 344 ||||||||||||||||||||| Sbjct: 2783868 ggaggcggccggcatcaccgc 2783888
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 145 gccgtgccgccggcgagcgccgcgg 169 ||||||||||| ||||||||||||| Sbjct: 3699970 gccgtgccgcccgcgagcgccgcgg 3699946 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tcgtcgcggcggccgtggcc 147 |||||||||||||||||||| Sbjct: 3358835 tcgtcgcggcggccgtggcc 3358854
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 308 accgcctcgccggcgaggaggcggc 332 ||||||||| ||||||||||||||| Sbjct: 7204869 accgcctcggcggcgaggaggcggc 7204845
>emb|AJ874112.1| Polyangium cellulosum disA gene, disB gene, disC gene, disD gene, ORF1, ORF2, ORF3, ORF4, ORF5, ORF6, ORF7, ORF8, ORF9, ORF10, ORF11, ORF12, ORF13, ORF14, ORF15, ORF16, ORF17, ORF18 and ORF19 Length = 86080 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 280 cccgcgctcgccgcgctggccgacg 304 |||||||||||||||||| |||||| Sbjct: 83444 cccgcgctcgccgcgctgcccgacg 83468
>ref|XM_476056.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3354 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 cggcaaccgcctcgccggcg 322 |||||||||||||||||||| Sbjct: 2235 cggcaaccgcctcgccggcg 2254
>ref|NM_188585.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3408 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 cggcaaccgcctcgccggcg 322 |||||||||||||||||||| Sbjct: 837 cggcaaccgcctcgccggcg 856
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 cgcgctcgccgcgctggccg 301 |||||||||||||||||||| Sbjct: 1146119 cgcgctcgccgcgctggccg 1146138
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cctcgccctcgtcgcggcgg 139 |||||||||||||||||||| Sbjct: 2226303 cctcgccctcgtcgcggcgg 2226322
>ref|XM_481192.1| Oryza sativa (japonica cultivar-group), mRNA Length = 582 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 tcgcggcggccgtggccgtg 150 |||||||||||||||||||| Sbjct: 44 tcgcggcggccgtggccgtg 63
>ref|XM_479735.1| Oryza sativa (japonica cultivar-group), mRNA Length = 750 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 tcgccgcgctggccgacggcaacc 310 ||||||||||||||| |||||||| Sbjct: 101 tcgccgcgctggccgccggcaacc 124
>ref|NM_197567.1| Oryza sativa (japonica cultivar-group) putative chloroplast nucleoid DNA binding protein (OSJNBa0025B05.4), mRNA Length = 1218 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 cgccggcgaggaggcggccg 334 |||||||||||||||||||| Sbjct: 100 cgccggcgaggaggcggccg 81
>ref|XM_479336.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1614 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 132 cgcggcggccgtggccgtgccgccggcg 159 ||||||||||||||||||| || ||||| Sbjct: 39 cgcggcggccgtggccgtggcggcggcg 66
>ref|XM_477081.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3138 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 caaccgcctcgccggcgagg 325 |||||||||||||||||||| Sbjct: 1395 caaccgcctcgccggcgagg 1414
>gb|DQ149987.1| Streptomyces neyagawaensis concanamycin A biosynthetic gene cluster, complete sequence Length = 99892 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 gctcgccgcgctggccgacg 304 |||||||||||||||||||| Sbjct: 26177 gctcgccgcgctggccgacg 26196
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 281 ccgcgctcgccgcgctggccgacggcaa 308 ||||||||||||||| | |||||||||| Sbjct: 853115 ccgcgctcgccgcgccgcccgacggcaa 853088
>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10, complete sequence Length = 156772 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 cggcaaccgcctcgccggcg 322 |||||||||||||||||||| Sbjct: 42835 cggcaaccgcctcgccggcg 42854
>ref|XM_370324.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein (MG06821.4) partial mRNA Length = 1383 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 352 ccggccaaggtcttctcccgcatgcgcg 379 |||||||||| ||||| ||||||||||| Sbjct: 196 ccggccaaggccttcttccgcatgcgcg 223
>ref|XM_415543.1| PREDICTED: Gallus gallus similar to CDC26 subunit of anaphase promoting complex (LOC417269), mRNA Length = 931 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 316 gccggcgaggaggcggccggcatc 339 ||||||||||||||||| |||||| Sbjct: 286 gccggcgaggaggcggcgggcatc 309
>ref|NM_145952.2| Mus musculus TBC1D12: TBC1 domain family, member 12 (Tbc1d12), mRNA Length = 3961 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cgtcgcggcggccgtggccg 148 |||||||||||||||||||| Sbjct: 69 cgtcgcggcggccgtggccg 88
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 281 ccgcgctcgccgcgctggccgacggcaa 308 ||||||||||||||| | |||||||||| Sbjct: 1869559 ccgcgctcgccgcgccgcccgacggcaa 1869532
>ref|NM_177454.2| Homo sapiens KIAA1946 (KIAA1946), mRNA Length = 3575 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 gcccgctcgctcgctccccc 97 |||||||||||||||||||| Sbjct: 31 gcccgctcgctcgctccccc 12
>gb|AC101775.10| Mus musculus chromosome 19, clone RP24-116B5, complete sequence Length = 167945 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cgtcgcggcggccgtggccg 148 |||||||||||||||||||| Sbjct: 30055 cgtcgcggcggccgtggccg 30074
>ref|XM_001000978.1| PREDICTED: Mus musculus RIKEN cDNA D430039N05 gene (D430039N05Rik), mRNA Length = 5757 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 gcccgctcgctcgctccccc 97 |||||||||||||||||||| Sbjct: 250 gcccgctcgctcgctccccc 231
>ref|XM_922613.2| PREDICTED: Mus musculus similar to KIAA1946, transcript variant 2 (LOC634842), mRNA Length = 5674 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 gcccgctcgctcgctccccc 97 |||||||||||||||||||| Sbjct: 298 gcccgctcgctcgctccccc 279
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 cggcgagcgccgcggtggcg 174 |||||||||||||||||||| Sbjct: 2178243 cggcgagcgccgcggtggcg 2178224
>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome Length = 138390 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 ccgcgctcgccgcgctggccgacg 304 |||||||||||||||| ||||||| Sbjct: 54911 ccgcgctcgccgcgctcgccgacg 54934
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gccgcgctggccgacggcaa 308 |||||||||||||||||||| Sbjct: 1113814 gccgcgctggccgacggcaa 1113833
>emb|Z78205.1|BHT1UL Bovine herpesvirus type 1 UL22-35 genes Length = 37000 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 ccgcgctcgccgcgctggccgacg 304 |||||||||||||||||| ||||| Sbjct: 22820 ccgcgctcgccgcgctgggcgacg 22843
>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome Length = 135301 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 ccgcgctcgccgcgctggccgacg 304 |||||||||||||||||| ||||| Sbjct: 53620 ccgcgctcgccgcgctgggcgacg 53643
>ref|XM_798078.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053505115.10) partial mRNA Length = 1683 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ccacccggccaaggtcttct 367 |||||||||||||||||||| Sbjct: 811 ccacccggccaaggtcttct 792
>ref|XM_798889.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053505057.10) partial mRNA Length = 1683 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ccacccggccaaggtcttct 367 |||||||||||||||||||| Sbjct: 811 ccacccggccaaggtcttct 792
>ref|XM_799469.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510837.30) partial mRNA Length = 1683 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ccacccggccaaggtcttct 367 |||||||||||||||||||| Sbjct: 811 ccacccggccaaggtcttct 792
>emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete chromosome; segment 3/12 Length = 300000 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 gccgccggcgagcgccgcgg 169 |||||||||||||||||||| Sbjct: 266584 gccgccggcgagcgccgcgg 266565
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cgcggcggccgtggccgtgc 151 |||||||||||||||||||| Sbjct: 724679 cgcggcggccgtggccgtgc 724660
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 aggcggccggcatcaccgcg 345 |||||||||||||||||||| Sbjct: 1478407 aggcggccggcatcaccgcg 1478426
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 cggcgagcgccgcggtggcgagca 178 ||||||||| |||||||||||||| Sbjct: 823583 cggcgagcggcgcggtggcgagca 823560
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16 Length = 348074 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 cgcgctcgccgcgctggccg 301 |||||||||||||||||||| Sbjct: 253039 cgcgctcgccgcgctggccg 253020
>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16 Length = 348624 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 137 cggccgtggccgtgccgccggcgagcgccgcg 168 ||||||||||||||| || |||| |||||||| Sbjct: 90969 cggccgtggccgtgctgcaggcgcgcgccgcg 91000
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14 Length = 344805 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 cgcgctcgccgcgctggccg 301 |||||||||||||||||||| Sbjct: 197234 cgcgctcgccgcgctggccg 197215
>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14 Length = 348866 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 137 cggccgtggccgtgccgccggcgagcgccgcg 168 ||||||||||||||| || |||| |||||||| Sbjct: 204004 cggccgtggccgtgctgcaggcgcgcgccgcg 204035
>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12 Length = 349672 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 cgcgctcgccgcgctggccg 301 |||||||||||||||||||| Sbjct: 213689 cgcgctcgccgcgctggccg 213708
>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12 Length = 343243 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 137 cggccgtggccgtgccgccggcgagcgccgcg 168 ||||||||||||||| || |||| |||||||| Sbjct: 4535 cggccgtggccgtgctgcaggcgcgcgccgcg 4566
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 281 ccgcgctcgccgcgctggccgacggcaa 308 ||||||||||||||| | |||||||||| Sbjct: 2495364 ccgcgctcgccgcgccgcccgacggcaa 2495391
>gb|BC060872.1| Homo sapiens KIAA1946, mRNA (cDNA clone MGC:71825 IMAGE:30347998), complete cds Length = 3575 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 gcccgctcgctcgctccccc 97 |||||||||||||||||||| Sbjct: 31 gcccgctcgctcgctccccc 12
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 gcatcaccgcgcgccacccg 354 |||||||||||||||||||| Sbjct: 38394 gcatcaccgcgcgccacccg 38375
>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04, complete sequence Length = 136713 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 cggcaaccgcctcgccggcg 322 |||||||||||||||||||| Sbjct: 131050 cggcaaccgcctcgccggcg 131069
>gb|AC074196.14| Oryza sativa chromosome 10 BAC OSJNBa0040D23 genomic sequence, complete sequence Length = 134102 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 cgccggcgaggaggcggccg 334 |||||||||||||||||||| Sbjct: 133069 cgccggcgaggaggcggccg 133050
>gb|AC096782.6| Oryza sativa chromosome 10 BAC OSJNBa0025B05 genomic sequence, complete sequence Length = 14849 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 cgccggcgaggaggcggccg 334 |||||||||||||||||||| Sbjct: 11687 cgccggcgaggaggcggccg 11706
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 gccgcgctggccgacggcaa 308 |||||||||||||||||||| Sbjct: 3863632 gccgcgctggccgacggcaa 3863613
>gb|AE005848.1| Caulobacter crescentus CB15 section 174 of 359 of the complete genome Length = 12510 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gccctcgtcgcggcggccgt 143 |||||||||||||||||||| Sbjct: 432 gccctcgtcgcggcggccgt 451
>dbj|AK091423.1| Homo sapiens cDNA FLJ34104 fis, clone FCBBF3007860 Length = 3283 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 gcccgctcgctcgctccccc 97 |||||||||||||||||||| Sbjct: 31 gcccgctcgctcgctccccc 12
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 cctgctcctcgccctcgtcg 133 |||||||||||||||||||| Sbjct: 1010309 cctgctcctcgccctcgtcg 1010290
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 281 ccgcgctcgccgcgctggccgacggcaaccgc 312 ||||||||||||| | ||||||||||| |||| Sbjct: 653338 ccgcgctcgccgcacaggccgacggcacccgc 653307
>emb|BX934329.2| Gallus gallus finished cDNA, clone ChEST51j10 Length = 346 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 316 gccggcgaggaggcggccggcatc 339 ||||||||||||||||| |||||| Sbjct: 98 gccggcgaggaggcggcgggcatc 121
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 310 cgcctcgccggcgaggaggcggcc 333 |||| ||||||||||||||||||| Sbjct: 4002558 cgccgcgccggcgaggaggcggcc 4002535
>dbj|AK038899.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230073I09 product:NPD019 homolog [Homo sapiens], full insert sequence Length = 945 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 gcccgctcgctcgctccccc 97 |||||||||||||||||||| Sbjct: 34 gcccgctcgctcgctccccc 15
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 cgccggcgaggaggcggccg 334 |||||||||||||||||||| Sbjct: 20492921 cgccggcgaggaggcggccg 20492902
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 tcgcggcggccgtggccgtg 150 |||||||||||||||||||| Sbjct: 10501904 tcgcggcggccgtggccgtg 10501923 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 287 tcgccgcgctggccgacggcaacc 310 ||||||||||||||| |||||||| Sbjct: 551827 tcgccgcgctggccgccggcaacc 551804
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 132 cgcggcggccgtggccgtgccgccggcg 159 ||||||||||||||||||| || ||||| Sbjct: 26969900 cgcggcggccgtggccgtggcggcggcg 26969873 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 caaccgcctcgccggcgagg 325 |||||||||||||||||||| Sbjct: 5808456 caaccgcctcgccggcgagg 5808437
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 cggcaaccgcctcgccggcg 322 |||||||||||||||||||| Sbjct: 4156356 cggcaaccgcctcgccggcg 4156375
>gb|AC017101.10| Homo sapiens BAC clone RP11-556A11 from 2, complete sequence Length = 195635 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 gcccgctcgctcgctccccc 97 |||||||||||||||||||| Sbjct: 113070 gcccgctcgctcgctccccc 113051
>dbj|AK172979.1| Mus musculus mRNA for mKIAA0608 protein Length = 3947 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cgtcgcggcggccgtggccg 148 |||||||||||||||||||| Sbjct: 69 cgtcgcggcggccgtggccg 88
>ref|XM_575160.1| PREDICTED: Rattus norvegicus similar to RIKEN cDNA D430039N05 gene (LOC499821), mRNA Length = 2649 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 gcccgctcgctcgctccccc 97 |||||||||||||||||||| Sbjct: 96 gcccgctcgctcgctccccc 77
>dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0452F10 Length = 145120 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 cggcaaccgcctcgccggcg 322 |||||||||||||||||||| Sbjct: 69243 cggcaaccgcctcgccggcg 69262
>dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1119_B04 Length = 151721 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 caaccgcctcgccggcgagg 325 |||||||||||||||||||| Sbjct: 115484 caaccgcctcgccggcgagg 115465
>dbj|AP003822.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1316_A04 Length = 87144 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 132 cgcggcggccgtggccgtgccgccggcg 159 ||||||||||||||||||| || ||||| Sbjct: 34378 cgcggcggccgtggccgtggcggcggcg 34351
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ccggcgagcgccgcggtggc 173 |||||||||||||||||||| Sbjct: 481743 ccggcgagcgccgcggtggc 481724
>dbj|AP004785.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0061B07 Length = 124766 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 gcggcggccgtggccgtgccgccg 156 |||||||||| ||||||||||||| Sbjct: 24471 gcggcggccggggccgtgccgccg 24448
>dbj|AP005455.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0503D09 Length = 144443 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 132 cgcggcggccgtggccgtgccgccggcg 159 ||||||||||||||||||| || ||||| Sbjct: 118491 cgcggcggccgtggccgtggcggcggcg 118464
>gb|AE005029.1| Halobacterium sp. NRC-1 section 60 of 170 of the complete genome Length = 12664 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 ccgtggccgtgccgccggcg 159 |||||||||||||||||||| Sbjct: 6265 ccgtggccgtgccgccggcg 6284
>emb|X94677.1|BHV1ULGNS Bovine herpesvirus type 1 genes for UL[27,28,29,30,31] Length = 10500 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 ccgcgctcgccgcgctggccgacg 304 |||||||||||||||||| ||||| Sbjct: 8544 ccgcgctcgccgcgctgggcgacg 8567
>dbj|AP005163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0053M06 Length = 175416 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 tcgcggcggccgtggccgtg 150 |||||||||||||||||||| Sbjct: 124495 tcgcggcggccgtggccgtg 124514
>dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0007D08 Length = 183142 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 287 tcgccgcgctggccgacggcaacc 310 ||||||||||||||| |||||||| Sbjct: 141787 tcgccgcgctggccgccggcaacc 141764
>dbj|AK111823.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048C13, full insert sequence Length = 3430 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 caaccgcctcgccggcgagg 325 |||||||||||||||||||| Sbjct: 1182 caaccgcctcgccggcgagg 1201
>dbj|AP004130.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1014_B05 Length = 121853 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 tcgcggcggccgtggccgtg 150 |||||||||||||||||||| Sbjct: 21372 tcgcggcggccgtggccgtg 21391
>dbj|AK109468.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-C06, full insert sequence Length = 1654 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 tcgcggcggccgtggccgtg 150 |||||||||||||||||||| Sbjct: 780 tcgcggcggccgtggccgtg 799
>emb|AL929058.4| Zebrafish DNA sequence from clone DKEY-69H9 in linkage group 20, complete sequence Length = 106063 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 cccccgcgctcgccgcgctg 297 |||||||||||||||||||| Sbjct: 65761 cccccgcgctcgccgcgctg 65742
>emb|X86780.1|SHGCPIR S.hygroscopicus gene cluster for polyketide immunosuppressant rapamycin Length = 107379 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 cgcgctcgccgcgctggccg 301 |||||||||||||||||||| Sbjct: 5448 cgcgctcgccgcgctggccg 5429
>gb|AF043654.1|AF043654 Streptomyces lividans 1326 BxlS (bxlS), BxlR (bxlR), BxlE (bxlE), BxlF (bxlF), BxlG (bxlG), and BxlA (bxlA) genes, complete cds Length = 8616 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 cgccggcgagcgccgcggtg 171 |||||||||||||||||||| Sbjct: 7804 cgccggcgagcgccgcggtg 7785
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 gccgcgctggccgacggcaa 308 |||||||||||||||||||| Sbjct: 3864306 gccgcgctggccgacggcaa 3864287
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 gaggaggcggccggcatcac 341 |||||||||||||||||||| Sbjct: 1139724 gaggaggcggccggcatcac 1139743
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 cgccggcgaggaggcggccg 334 |||||||||||||||||||| Sbjct: 20504193 cgccggcgaggaggcggccg 20504174
>emb|AL772301.7| Mouse DNA sequence from clone RP23-111F12 on chromosome 2, complete sequence Length = 187665 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 gcccgctcgctcgctccccc 97 |||||||||||||||||||| Sbjct: 165328 gcccgctcgctcgctccccc 165309
>emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete genome; segment 27/29 Length = 303450 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 cgccggcgagcgccgcggtg 171 |||||||||||||||||||| Sbjct: 60242 cgccggcgagcgccgcggtg 60223 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,606,318 Number of Sequences: 3902068 Number of extensions: 2606318 Number of successful extensions: 81084 Number of sequences better than 10.0: 133 Number of HSP's better than 10.0 without gapping: 138 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 68533 Number of HSP's gapped (non-prelim): 12551 length of query: 440 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 418 effective length of database: 17,147,199,772 effective search space: 7167529504696 effective search space used: 7167529504696 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
