>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 165/202 (81%), Gaps = 2/202 (0%)
 Strand = Plus / Minus

                                                                           
Query: 256     attcagatgatgagtactctgtagctggtgataagcccgaagtagagttcatggattttc 315
               ||||||||||||| | |||||| ||||| || ||||| || |||||||||||||| | ||
Sbjct: 3201000 attcagatgatgaattctctgtggctggcgagaagccagatgtagagttcatggactatc 3200941

                                                                           
Query: 316     agaatgacaacactcttcaggattat-caatctgatgatggtcccgtagttgttacggct 374
               |||||||   | || |||| |||||| || || || ||||  || || ||||| |||| |
Sbjct: 3200940 agaatgatggctctattcaagattattcactc-gaagatgcccctgtggttgtcacggtt 3200882

                                                                           
Query: 375     cctttcccgtttgtgaacggaaaacctaaatctgtccttgttggagaaacatctacagac 434
               |||||||| ||  |  |||| ||||| ||||||||||||||||||||||||||| | |||
Sbjct: 3200881 cctttccctttcatcgacggcaaaccaaaatctgtccttgttggagaaacatctgccgac 3200822

                                     
Query: 435     accatttacatagagaatacct 456
               ||||||  |||||| |||||||
Sbjct: 3200821 accattagcatagaaaatacct 3200800

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 165/202 (81%), Gaps = 2/202 (0%)
 Strand = Plus / Minus

                                                                           
Query: 256     attcagatgatgagtactctgtagctggtgataagcccgaagtagagttcatggattttc 315
               ||||||||||||| | |||||| ||||| || ||||| || |||||||||||||| | ||
Sbjct: 3201111 attcagatgatgaattctctgtggctggcgagaagccagatgtagagttcatggactatc 3201052

                                                                           
Query: 316     agaatgacaacactcttcaggattat-caatctgatgatggtcccgtagttgttacggct 374
               |||||||   | || |||| |||||| || || || ||||  || || ||||| |||| |
Sbjct: 3201051 agaatgatggctctattcaagattattcactc-gaagatgcccctgtggttgtcacggtt 3200993

                                                                           
Query: 375     cctttcccgtttgtgaacggaaaacctaaatctgtccttgttggagaaacatctacagac 434
               |||||||| ||  |  |||| ||||| ||||||||||||||||||||||||||| | |||
Sbjct: 3200992 cctttccctttcatcgacggcaaaccaaaatctgtccttgttggagaaacatctgccgac 3200933

                                     
Query: 435     accatttacatagagaatacct 456
               ||||||  |||||| |||||||
Sbjct: 3200932 accattagcatagaaaatacct 3200911

>gb|AC119797.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0083G16, complete sequence
          Length = 145590

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 165/202 (81%), Gaps = 2/202 (0%)
 Strand = Plus / Minus

                                                                         
Query: 256   attcagatgatgagtactctgtagctggtgataagcccgaagtagagttcatggattttc 315
             ||||||||||||| | |||||| ||||| || ||||| || |||||||||||||| | ||
Sbjct: 25873 attcagatgatgaattctctgtggctggcgagaagccagatgtagagttcatggactatc 25814

                                                                         
Query: 316   agaatgacaacactcttcaggattat-caatctgatgatggtcccgtagttgttacggct 374
             |||||||   | || |||| |||||| || || || ||||  || || ||||| |||| |
Sbjct: 25813 agaatgatggctctattcaagattattcactc-gaagatgcccctgtggttgtcacggtt 25755

                                                                         
Query: 375   cctttcccgtttgtgaacggaaaacctaaatctgtccttgttggagaaacatctacagac 434
             |||||||| ||  |  |||| ||||| ||||||||||||||||||||||||||| | |||
Sbjct: 25754 cctttccctttcatcgacggcaaaccaaaatctgtccttgttggagaaacatctgccgac 25695

                                   
Query: 435   accatttacatagagaatacct 456
             ||||||  |||||| |||||||
Sbjct: 25694 accattagcatagaaaatacct 25673

>dbj|AK068372.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151B11, full
           insert sequence
          Length = 3650

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 165/202 (81%), Gaps = 2/202 (0%)
 Strand = Plus / Plus

                                                                       
Query: 256 attcagatgatgagtactctgtagctggtgataagcccgaagtagagttcatggattttc 315
           ||||||||||||| | |||||| ||||| || ||||| || |||||||||||||| | ||
Sbjct: 476 attcagatgatgaattctctgtggctggcgagaagccagatgtagagttcatggactatc 535

                                                                       
Query: 316 agaatgacaacactcttcaggattat-caatctgatgatggtcccgtagttgttacggct 374
           |||||||   | || |||| |||||| || || || ||||  || || ||||| |||| |
Sbjct: 536 agaatgatggctctattcaagattattcactc-gaagatgcccctgtggttgtcacggtt 594

                                                                       
Query: 375 cctttcccgtttgtgaacggaaaacctaaatctgtccttgttggagaaacatctacagac 434
           |||||||| ||  |  |||| ||||| ||||||||||||||||||||||||||| | |||
Sbjct: 595 cctttccctttcatcgacggcaaaccaaaatctgtccttgttggagaaacatctgccgac 654

                                 
Query: 435 accatttacatagagaatacct 456
           ||||||  |||||| |||||||
Sbjct: 655 accattagcatagaaaatacct 676

>gb|AC146947.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0057M18 map near E10005S, complete sequence
          Length = 140920

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 121   ctccttccgactcccaccaccacc 144
             |||||||| |||||||||||||||
Sbjct: 30582 ctccttcccactcccaccaccacc 30559

>gb|AC128642.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OJ1115_A03
             map S20262S, complete sequence
          Length = 149553

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 121   ctccttccgactcccaccaccacc 144
             |||||||| |||||||||||||||
Sbjct: 79043 ctccttcccactcccaccaccacc 79066

>gb|DQ017380.1| Trichoplusia ni single nucleopolyhedrovirus, complete genome
          Length = 134394

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 232   ctcgaggattcaagatggggcatcattc 259
             |||||| |||||||||||||||| ||||
Sbjct: 78143 ctcgagaattcaagatggggcattattc 78170

>gb|AC126277.3| Mus musculus BAC clone RP23-161L22 from 12, complete sequence
          Length = 191231

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 304   tcatggattttcagaatgac 323
             ||||||||||||||||||||
Sbjct: 82461 tcatggattttcagaatgac 82480

>emb|Z99112.2|BSUB0009 Bacillus subtilis complete genome (section 9 of 21): from 1602883 to
             1807145
          Length = 204263

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 385   ttgtgaacggaaaacctaaa 404
             ||||||||||||||||||||
Sbjct: 52090 ttgtgaacggaaaacctaaa 52071

>emb|Y13937.1|BSY13937 Bacillus subtilis genomic DNA from the spoVM region
          Length = 27779

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 385   ttgtgaacggaaaacctaaa 404
             ||||||||||||||||||||
Sbjct: 18423 ttgtgaacggaaaacctaaa 18404

>gb|AC114496.2| Homo sapiens chromosome 1 clone RP11-504B1, complete sequence
          Length = 186551

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 396    aaacctaaatctgtccttgt 415
              ||||||||||||||||||||
Sbjct: 180257 aaacctaaatctgtccttgt 180276

>gb|AC097659.3| Homo sapiens BAC clone RP11-408C24 from 4, complete sequence
          Length = 131944

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 294 gaagtagagttcatggattttcagaatg 321
           ||||| |||||||||| |||||||||||
Sbjct: 416 gaagtggagttcatggcttttcagaatg 389

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 121      ctccttccgactcccaccaccacc 144
                |||||||| |||||||||||||||
Sbjct: 13671942 ctccttcccactcccaccaccacc 13671919



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 121      ctccttccgactcccaccaccacc 144
                |||||||| |||||||||||||||
Sbjct: 13362690 ctccttcccactcccaccaccacc 13362713

>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome
          Length = 2088737

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 133    cccaccaccacctcgtcccg 152
              ||||||||||||||||||||
Sbjct: 910944 cccaccaccacctcgtcccg 910963

>gb|AC096651.1| Homo sapiens BAC clone RP11-16J15 from 4, complete sequence
          Length = 158661

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 294    gaagtagagttcatggattttcagaatg 321
              ||||| |||||||||| |||||||||||
Sbjct: 157077 gaagtggagttcatggcttttcagaatg 157050

>gb|AC110183.10| Mus musculus chromosome 3, clone RP24-406M9, complete sequence
          Length = 171452

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 252    catcattcagatgatgagta 271
              ||||||||||||||||||||
Sbjct: 115438 catcattcagatgatgagta 115457

>gb|AC006560.8| Homo sapiens 12 BAC RPCI11-792F18 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 202478

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 303   ttcatggattttcagaatga 322
             ||||||||||||||||||||
Sbjct: 57338 ttcatggattttcagaatga 57357

>emb|AL929174.19| Zebrafish DNA sequence from clone CH211-117C16 in linkage group 12,
              complete sequence
          Length = 161610

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 393    ggaaaacctaaatctgtcct 412
              ||||||||||||||||||||
Sbjct: 101280 ggaaaacctaaatctgtcct 101299

>dbj|AK068090.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132N13, full
           insert sequence
          Length = 1354

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 121 ctccttccgactcccaccaccacc 144
           |||||||| |||||||||||||||
Sbjct: 60  ctccttcccactcccaccaccacc 83

>gb|L12244.1|BACSPORLG Bacillus subtilis sporulation factor (spoVM) gene and ribosomal
           protein L28 gene, complete cds's
          Length = 716

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 385 ttgtgaacggaaaacctaaa 404
           ||||||||||||||||||||
Sbjct: 370 ttgtgaacggaaaacctaaa 351

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 121      ctccttccgactcccaccaccacc 144
                |||||||| |||||||||||||||
Sbjct: 13753940 ctccttcccactcccaccaccacc 13753917



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 121      ctccttccgactcccaccaccacc 144
                |||||||| |||||||||||||||
Sbjct: 13442869 ctccttcccactcccaccaccacc 13442892

>emb|AM050332.1| Unidentified microorganism phagemid clone pBKR.41
          Length = 2802

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 370  cggctcctttcccgtttgtg 389
            ||||||||||||||||||||
Sbjct: 2703 cggctcctttcccgtttgtg 2684


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,401,773
Number of Sequences: 3902068
Number of extensions: 3401773
Number of successful extensions: 65349
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65204
Number of HSP's gapped (non-prelim): 145
length of query: 474
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 452
effective length of database: 17,147,199,772
effective search space: 7750534296944
effective search space used: 7750534296944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)