>MATK_CAPHA (Q5VH41) Maturase K (Intron maturase)|
          Length = 504

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 320 YLNFDHPMNHLFFHPFFVNEVVYIV 246
           YL FD    H F +PFF  E +Y++
Sbjct: 7   YLEFDGARQHNFLYPFFFRESIYVL 31

>AN3_XENLA (P24346) Putative ATP-dependent RNA helicase an3 (EC 3.6.1.-)|
          Length = 697

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +2

Query: 209 NKTDSQSR-ASCHGRYKPPHLRKKDGKTN 292
           N  D++S  A   GRY PPHLR K+   N
Sbjct: 22  NSADAESGVAGTKGRYIPPHLRNKEASRN 50

>MURD_BACSU (Q03522) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC|
           6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
           synthetase) (D-glutamic acid-adding enzyme)
          Length = 451

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = -1

Query: 234 ALDCESVLFSFGVI-ADGEDDLSPYTKNICKFATKPATCPESEAFGSE 94
           A D   +L + G+   +G DDL PY K++    T   T P+ E  G+E
Sbjct: 345 AFDKPVILLAGGLDRGNGFDDLKPYMKHVKAVLTFGQTAPKLEKLGNE 392

>IMB2_SCHPO (O14089) Putative importin beta-2 subunit (Karyopherin beta-2|
           subunit) (Importin 104) (Transportin) (TRN)
          Length = 910

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +3

Query: 57  FILPFFVVCISFFQNQKLHFQDM*QVLWQ 143
           ++LP FV+C++ ++N     +DM Q + Q
Sbjct: 854 YLLPMFVLCVAEYENPSAELRDMFQKILQ 882


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,436,337
Number of Sequences: 219361
Number of extensions: 1067130
Number of successful extensions: 3355
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3355
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)