>CESAA_ARATH (Q9SKJ5) Probable cellulose synthase A catalytic subunit 10|
           [UDP-forming] (EC 2.4.1.12) (AtCesA-10) (AtCesA-13)
          Length = 1065

 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 44/106 (41%), Positives = 62/106 (58%), Gaps = 4/106 (3%)
 Frame = +2

Query: 173 IFAGILLIWFYRATHIPARGSSSLGWRAGLGLLVAELWFGLYWVLTLSVRWNPVRRTTFK 352
           I  G+ L   YR TH P + + +L W   L  ++ E+WF   W+L    +W P+ R TF 
Sbjct: 270 IILGVFL--HYRTTH-PVKDAYAL-W---LTSVICEIWFAFSWLLDQFPKWYPINRETFL 322

Query: 353 DRLSASYDDD----QLPGVDIFVCTADPALEPPMLVISTVLSVMAM 478
           DRL+  YD D    QL  VD+FV T DP  EPP++  +TVLS++A+
Sbjct: 323 DRLALRYDRDGEPSQLAPVDVFVSTVDPMKEPPLVTANTVLSILAV 368

>CESA8_ARATH (Q8LPK5) Cellulose synthase A catalytic subunit 8 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-8) (Irregular xylem protein 1)
           (AtIRX1)
          Length = 985

 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 43/117 (36%), Positives = 66/117 (56%), Gaps = 4/117 (3%)
 Frame = +2

Query: 140 RVLAYRLYAGTIFAGILLIWFYRATHIPARGSSSLGWRAGLGLLVAELWFGLYWVLTLSV 319
           ++ +YR+        + L + YR TH P   +  L W   L  ++ E+WF + WVL    
Sbjct: 179 KITSYRIVIIMRLIILALFFNYRITH-PVDSAYGL-W---LTSVICEIWFAVSWVLDQFP 233

Query: 320 RWNPVRRTTFKDRLSASY----DDDQLPGVDIFVCTADPALEPPMLVISTVLSVMAM 478
           +W+P+ R T+ DRLSA +    +  QL  VD FV T DP  EPP++  +TVLS++A+
Sbjct: 234 KWSPINRETYIDRLSARFEREGEQSQLAAVDFFVSTVDPLKEPPLITANTVLSILAL 290

>CESA5_ARATH (Q8L778) Cellulose synthase A catalytic subunit 5 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-5)
          Length = 1069

 Score = 76.6 bits (187), Expect = 3e-14
 Identities = 43/120 (35%), Positives = 67/120 (55%), Gaps = 4/120 (3%)
 Frame = +2

Query: 131 KPKRVLAYRLYAGTIFAGILLIWFYRATHIPARGSSSLGWRAGLGLLVAELWFGLYWVLT 310
           K  ++  YR+        + L + YR  H P   + +L W   L  ++ E+WF + WVL 
Sbjct: 256 KSSKINPYRMLIVLRLVILGLFFHYRILH-PVNDAYAL-W---LISVICEIWFAVSWVLD 310

Query: 311 LSVRWNPVRRTTFKDRLSASYDDD----QLPGVDIFVCTADPALEPPMLVISTVLSVMAM 478
              +W P+ R T+ DRLS  Y+ +    +L GVD+FV T DP  EPP++  +TVLS++A+
Sbjct: 311 QFPKWYPIERETYLDRLSLRYEKEGKPSELAGVDVFVSTVDPMKEPPLITANTVLSILAV 370

>CESA3_ARATH (Q941L0) Cellulose synthase A catalytic subunit 3 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-3) (Constitutive expression of VSP1
           protein 1) (Isoxaben resistant protein 1) (Ath-B)
          Length = 1065

 Score = 75.5 bits (184), Expect = 7e-14
 Identities = 45/117 (38%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
 Frame = +2

Query: 140 RVLAYRLYAGTIFAGILLIWFYRATHIPARGSSSLGWRAGLGLLVAELWFGLYWVLTLSV 319
           R+  YR+        + L   YR T+ P   + +L W   L  ++ E+WF L W+L    
Sbjct: 254 RINPYRMVIMLRLVILCLFLHYRITN-PVPNAFAL-W---LVSVICEIWFALSWILDQFP 308

Query: 320 RWNPVRRTTFKDRLSASYDDD----QLPGVDIFVCTADPALEPPMLVISTVLSVMAM 478
           +W PV R T+ DRL+  YD +    QL  VDIFV T DP  EPP++  +TVLS++A+
Sbjct: 309 KWFPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAV 365

>CESA9_ARATH (Q9SJ22) Probable cellulose synthase A catalytic subunit 9|
           [UDP-forming] (EC 2.4.1.12) (AtCesA-9)
          Length = 1088

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 42/120 (35%), Positives = 66/120 (55%), Gaps = 4/120 (3%)
 Frame = +2

Query: 131 KPKRVLAYRLYAGTIFAGILLIWFYRATHIPARGSSSLGWRAGLGLLVAELWFGLYWVLT 310
           +  R+  YR+      A + L + YR  H P   +  L W   L  ++ E+WF + W+L 
Sbjct: 274 RSSRINPYRMLIFCRLAILGLFFHYRILH-PVNDAFGL-W---LTSVICEIWFAVSWILD 328

Query: 311 LSVRWNPVRRTTFKDRLSASYDDD----QLPGVDIFVCTADPALEPPMLVISTVLSVMAM 478
              +W P+ R T+ DRLS  Y+ +    +L  VD+FV T DP  EPP++  +TVLS++A+
Sbjct: 329 QFPKWYPIERETYLDRLSLRYEKEGKPSELAPVDVFVSTVDPLKEPPLITANTVLSILAV 388

>CESA1_ARATH (O48946) Cellulose synthase A catalytic subunit 1 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-1) (Radially swollen protein 1)
           (AtRSW1)
          Length = 1081

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 46/119 (38%), Positives = 68/119 (57%), Gaps = 6/119 (5%)
 Frame = +2

Query: 140 RVLAYRLYAGTIFAGILLIWF--YRATHIPARGSSSLGWRAGLGLLVAELWFGLYWVLTL 313
           R+  YR+    I   I+L +F  YR TH P + +  L W   L  ++ E+WF   W+L  
Sbjct: 270 RLTPYRVVI--ILRLIILCFFLQYRTTH-PVKNAYPL-W---LTSVICEIWFAFSWLLDQ 322

Query: 314 SVRWNPVRRTTFKDRLSASYDDD----QLPGVDIFVCTADPALEPPMLVISTVLSVMAM 478
             +W P+ R T+ DRL+  YD D    QL  VD+FV T DP  EPP++  +TVLS++++
Sbjct: 323 FPKWYPINRETYLDRLAIRYDRDGEPSQLVPVDVFVSTVDPLKEPPLVTANTVLSILSV 381

>CESA2_ARATH (O48947) Cellulose synthase A catalytic subunit 2 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-2) (Ath-A)
          Length = 1084

 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 42/120 (35%), Positives = 65/120 (54%), Gaps = 4/120 (3%)
 Frame = +2

Query: 131 KPKRVLAYRLYAGTIFAGILLIWFYRATHIPARGSSSLGWRAGLGLLVAELWFGLYWVLT 310
           +  R+  YR+      A + L + YR  H P   +  L W   L  ++ E+WF + W+L 
Sbjct: 269 RSSRINPYRMLILCRLAILGLFFHYRILH-PVNDAYGL-W---LTSVICEIWFAVSWILD 323

Query: 311 LSVRWNPVRRTTFKDRLSASYDDDQLPG----VDIFVCTADPALEPPMLVISTVLSVMAM 478
              +W P+ R T+ DRLS  Y+ +  P     VD+FV T DP  EPP++  +TVLS++A+
Sbjct: 324 QFPKWYPIERETYLDRLSLRYEKEGKPSGLAPVDVFVSTVDPLKEPPLITANTVLSILAV 383

>CESA6_ARATH (Q94JQ6) Cellulose synthase A catalytic subunit 6 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-6) (Isoxaben resistant protein 2)
           (Protein PROCUSTE1) (Protein Quill) (AraxCelA)
          Length = 1084

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 42/120 (35%), Positives = 66/120 (55%), Gaps = 4/120 (3%)
 Frame = +2

Query: 131 KPKRVLAYRLYAGTIFAGILLIWFYRATHIPARGSSSLGWRAGLGLLVAELWFGLYWVLT 310
           K  ++  YR+        + L + YR  H P + + +L W   L  ++ E+WF + WVL 
Sbjct: 268 KSSKINPYRMLIVLRLVILGLFFHYRILH-PVKDAYAL-W---LISVICEIWFAVSWVLD 322

Query: 311 LSVRWNPVRRTTFKDRLSASYDDDQLPG----VDIFVCTADPALEPPMLVISTVLSVMAM 478
              +W P+ R T+ DRLS  Y+ +  P     VD+FV T DP  EPP++  +TVLS++A+
Sbjct: 323 QFPKWYPIERETYLDRLSLRYEKEGKPSGLSPVDVFVSTVDPLKEPPLITANTVLSILAV 382

>CESA4_ARATH (Q84JA6) Cellulose synthase A catalytic subunit 4 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-4) (Irregular xylem protein 5)
           (AtIRX5)
          Length = 1049

 Score = 72.8 bits (177), Expect = 5e-13
 Identities = 38/103 (36%), Positives = 64/103 (62%), Gaps = 5/103 (4%)
 Frame = +2

Query: 185 ILLIWFYRATHI-PARGSSSLGWRAGLGLLVAELWFGLYWVLTLSVRWNPVRRTTFKDRL 361
           ++L++F+R   + PA+ +  L W   L  ++ E+WF L W+L    +W P+ R T+ DRL
Sbjct: 223 VILVFFFRFRILTPAKDAYPL-W---LISVICEIWFALSWILDQFPKWFPINRETYLDRL 278

Query: 362 SASYDDD----QLPGVDIFVCTADPALEPPMLVISTVLSVMAM 478
           S  ++ D    +L  VD+FV T DP  EPP++  +T+LS++A+
Sbjct: 279 SMRFERDGEKNKLAPVDVFVSTVDPLKEPPIITANTILSILAV 321

>CESA7_ARATH (Q9SWW6) Cellulose synthase A catalytic subunit 7 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-7) (Irregular xylem protein 3)
           (AtIRX3)
          Length = 1026

 Score = 70.1 bits (170), Expect = 3e-12
 Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
 Frame = +2

Query: 269 LVAELWFGLYWVLTLSVRWNPVRRTTFKDRLSASYDDDQLPG----VDIFVCTADPALEP 436
           ++ E+WF + W+L    +W P+ R T+ DRLS  Y+ +  P     VD+FV T DP  EP
Sbjct: 271 VICEIWFAVSWILDQFPKWFPIERETYLDRLSLRYEREGEPNMLAPVDVFVSTVDPLKEP 330

Query: 437 PMLVISTVLSVMAM 478
           P++  +TVLS++AM
Sbjct: 331 PLVTSNTVLSILAM 344

>RPOB1_METTH (O27124) DNA-directed RNA polymerase subunit B' (EC 2.7.7.6)|
          Length = 603

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -3

Query: 391 GELVIVIAGREAVLEGGAADRVPAHGEGEDPVE 293
           G+++ ++AG+ A +EG   D  P  GE ED ++
Sbjct: 407 GQVLEMLAGKAACMEGRRVDGTPFTGEDEDDIK 439


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,684,812
Number of Sequences: 219361
Number of extensions: 911146
Number of successful extensions: 2805
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2794
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3465624120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)