ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl31c05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_467560.1| Oryza sativa (japonica cultivar-group), mRNA Length = 819 Score = 109 bits (55), Expect = 9e-21 Identities = 197/243 (81%), Gaps = 1/243 (0%) Strand = Plus / Plus Query: 252 gggcggggctcgggctgctcgtggccgagctctggttcggcctctactgggtcctcaccc 311 ||||| |||||||| |||||| ||| ||||||||||||||| ||||||||||||| || | Sbjct: 247 gggcgtggctcgggatgctcgcggcggagctctggttcggcttctactgggtcctgacgc 306 Query: 312 tctccgtgcgctggaacccggtccgccgcaccaccttcaaggaccgcctctcggccagct 371 | |||||||| ||| ||| ||| |||| ||||||||| ||||||||| | |||| Sbjct: 307 tgtccgtgcggtggtgccccgtctaccgccgcaccttcaaagaccgcctcgctcaaagct 366 Query: 372 atgacgatgaccagctccccggcgtggacatatttgtgtgtacagcggacccagctcttg 431 | || ||| |||| ||| | |||||||| ||||| ||||||||||| ||| | | Sbjct: 367 acagtgaagacgagcttcccagtgtggacatttttgtctgtacagcggatccaacagcag 426 Query: 432 aaccacccatgcttgtcatctccacggttctgtctgtcatggc-tatgactacccgccag 490 | ||||| ||||||||||||||||| ||| ||||||||||||| |||||||||| ||| | Sbjct: 427 agccaccgatgcttgtcatctccactgttttgtctgtcatggcttatgactacctgcctg 486 Query: 491 aga 493 ||| Sbjct: 487 aga 489
>dbj|AK107881.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-D06, full insert sequence Length = 819 Score = 109 bits (55), Expect = 9e-21 Identities = 197/243 (81%), Gaps = 1/243 (0%) Strand = Plus / Plus Query: 252 gggcggggctcgggctgctcgtggccgagctctggttcggcctctactgggtcctcaccc 311 ||||| |||||||| |||||| ||| ||||||||||||||| ||||||||||||| || | Sbjct: 247 gggcgtggctcgggatgctcgcggcggagctctggttcggcttctactgggtcctgacgc 306 Query: 312 tctccgtgcgctggaacccggtccgccgcaccaccttcaaggaccgcctctcggccagct 371 | |||||||| ||| ||| ||| |||| ||||||||| ||||||||| | |||| Sbjct: 307 tgtccgtgcggtggtgccccgtctaccgccgcaccttcaaagaccgcctcgctcaaagct 366 Query: 372 atgacgatgaccagctccccggcgtggacatatttgtgtgtacagcggacccagctcttg 431 | || ||| |||| ||| | |||||||| ||||| ||||||||||| ||| | | Sbjct: 367 acagtgaagacgagcttcccagtgtggacatttttgtctgtacagcggatccaacagcag 426 Query: 432 aaccacccatgcttgtcatctccacggttctgtctgtcatggc-tatgactacccgccag 490 | ||||| ||||||||||||||||| ||| ||||||||||||| |||||||||| ||| | Sbjct: 427 agccaccgatgcttgtcatctccactgttttgtctgtcatggcttatgactacctgcctg 486 Query: 491 aga 493 ||| Sbjct: 487 aga 489
>dbj|AK101487.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042D19, full insert sequence Length = 2346 Score = 109 bits (55), Expect = 9e-21 Identities = 197/243 (81%), Gaps = 1/243 (0%) Strand = Plus / Plus Query: 252 gggcggggctcgggctgctcgtggccgagctctggttcggcctctactgggtcctcaccc 311 ||||| |||||||| |||||| ||| ||||||||||||||| ||||||||||||| || | Sbjct: 256 gggcgtggctcgggatgctcgcggcggagctctggttcggcttctactgggtcctgacgc 315 Query: 312 tctccgtgcgctggaacccggtccgccgcaccaccttcaaggaccgcctctcggccagct 371 | |||||||| ||| ||| ||| |||| ||||||||| ||||||||| | |||| Sbjct: 316 tgtccgtgcggtggtgccccgtctaccgccgcaccttcaaagaccgcctcgctcaaagct 375 Query: 372 atgacgatgaccagctccccggcgtggacatatttgtgtgtacagcggacccagctcttg 431 | || ||| |||| ||| | |||||||| ||||| ||||||||||| ||| | | Sbjct: 376 acagtgaagacgagcttcccagtgtggacatttttgtctgtacagcggatccaacagcag 435 Query: 432 aaccacccatgcttgtcatctccacggttctgtctgtcatggc-tatgactacccgccag 490 | ||||| ||||||||||||||||| ||| ||||||||||||| |||||||||| ||| | Sbjct: 436 agccaccgatgcttgtcatctccactgttttgtctgtcatggcttatgactacctgcctg 495 Query: 491 aga 493 ||| Sbjct: 496 aga 498
>ref|XM_467561.1| Oryza sativa (japonica cultivar-group), mRNA Length = 513 Score = 83.8 bits (42), Expect = 5e-13 Identities = 93/110 (84%) Strand = Plus / Plus Query: 252 gggcggggctcgggctgctcgtggccgagctctggttcggcctctactgggtcctcaccc 311 ||||| |||||||| |||||| ||| ||||||||||||||| ||||||||||||| || | Sbjct: 247 gggcgtggctcgggatgctcgcggcggagctctggttcggcttctactgggtcctgacgc 306 Query: 312 tctccgtgcgctggaacccggtccgccgcaccaccttcaaggaccgcctc 361 | |||||||| ||| ||| ||| |||| ||||||||| ||||||||| Sbjct: 307 tgtccgtgcggtggtgccccgtctaccgccgcaccttcaaagaccgcctc 356
>gb|AF432501.1|AF432501 Oryza sativa cellulose synthase-like protein OsCslE2 gene, complete cds Length = 6037 Score = 83.8 bits (42), Expect = 5e-13 Identities = 93/110 (84%) Strand = Plus / Plus Query: 252 gggcggggctcgggctgctcgtggccgagctctggttcggcctctactgggtcctcaccc 311 ||||| |||||||| |||||| ||| ||||||||||||||| ||||||||||||| || | Sbjct: 914 gggcgtggctcgggatgctcgcggcggagctctggttcggcttctactgggtcctgacgc 973 Query: 312 tctccgtgcgctggaacccggtccgccgcaccaccttcaaggaccgcctc 361 | |||||||| ||| ||| ||| |||| ||||||||| ||||||||| Sbjct: 974 tgtccgtgcggtggtgccccgtctaccgccgcaccttcaaagaccgcctc 1023 Score = 71.9 bits (36), Expect = 2e-09 Identities = 85/100 (85%), Gaps = 1/100 (1%) Strand = Plus / Plus Query: 395 gtggacatatttgtgtgtacagcggacccagctcttgaaccacccatgcttgtcatctcc 454 |||||||| ||||| ||||||||||| ||| | || ||||| ||||||||||||||| Sbjct: 1271 gtggacatttttgtctgtacagcggatccaacagcagagccaccgatgcttgtcatctcc 1330 Query: 455 acggttctgtctgtcatggc-tatgactacccgccagaga 493 || ||| ||||||||||||| |||||||||| ||| |||| Sbjct: 1331 actgttttgtctgtcatggcttatgactacctgcctgaga 1370
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 83.8 bits (42), Expect = 5e-13 Identities = 93/110 (84%) Strand = Plus / Plus Query: 252 gggcggggctcgggctgctcgtggccgagctctggttcggcctctactgggtcctcaccc 311 ||||| |||||||| |||||| ||| ||||||||||||||| ||||||||||||| || | Sbjct: 30167605 gggcgtggctcgggatgctcgcggcggagctctggttcggcttctactgggtcctgacgc 30167664 Query: 312 tctccgtgcgctggaacccggtccgccgcaccaccttcaaggaccgcctc 361 | |||||||| ||| ||| ||| |||| ||||||||| ||||||||| Sbjct: 30167665 tgtccgtgcggtggtgccccgtctaccgccgcaccttcaaagaccgcctc 30167714 Score = 71.9 bits (36), Expect = 2e-09 Identities = 85/100 (85%), Gaps = 1/100 (1%) Strand = Plus / Plus Query: 395 gtggacatatttgtgtgtacagcggacccagctcttgaaccacccatgcttgtcatctcc 454 |||||||| ||||| ||||||||||| ||| | || ||||| ||||||||||||||| Sbjct: 30167962 gtggacatttttgtctgtacagcggatccaacagcagagccaccgatgcttgtcatctcc 30168021 Query: 455 acggttctgtctgtcatggc-tatgactacccgccagaga 493 || ||| ||||||||||||| |||||||||| ||| |||| Sbjct: 30168022 actgttttgtctgtcatggcttatgactacctgcctgaga 30168061
>dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0685G12 Length = 149155 Score = 83.8 bits (42), Expect = 5e-13 Identities = 93/110 (84%) Strand = Plus / Plus Query: 252 gggcggggctcgggctgctcgtggccgagctctggttcggcctctactgggtcctcaccc 311 ||||| |||||||| |||||| ||| ||||||||||||||| ||||||||||||| || | Sbjct: 147202 gggcgtggctcgggatgctcgcggcggagctctggttcggcttctactgggtcctgacgc 147261 Query: 312 tctccgtgcgctggaacccggtccgccgcaccaccttcaaggaccgcctc 361 | |||||||| ||| ||| ||| |||| ||||||||| ||||||||| Sbjct: 147262 tgtccgtgcggtggtgccccgtctaccgccgcaccttcaaagaccgcctc 147311 Score = 71.9 bits (36), Expect = 2e-09 Identities = 85/100 (85%), Gaps = 1/100 (1%) Strand = Plus / Plus Query: 395 gtggacatatttgtgtgtacagcggacccagctcttgaaccacccatgcttgtcatctcc 454 |||||||| ||||| ||||||||||| ||| | || ||||| ||||||||||||||| Sbjct: 147559 gtggacatttttgtctgtacagcggatccaacagcagagccaccgatgcttgtcatctcc 147618 Query: 455 acggttctgtctgtcatggc-tatgactacccgccagaga 493 || ||| ||||||||||||| |||||||||| ||| |||| Sbjct: 147619 actgttttgtctgtcatggcttatgactacctgcctgaga 147658
>dbj|AP004179.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_G07 Length = 93240 Score = 83.8 bits (42), Expect = 5e-13 Identities = 93/110 (84%) Strand = Plus / Plus Query: 252 gggcggggctcgggctgctcgtggccgagctctggttcggcctctactgggtcctcaccc 311 ||||| |||||||| |||||| ||| ||||||||||||||| ||||||||||||| || | Sbjct: 40309 gggcgtggctcgggatgctcgcggcggagctctggttcggcttctactgggtcctgacgc 40368 Query: 312 tctccgtgcgctggaacccggtccgccgcaccaccttcaaggaccgcctc 361 | |||||||| ||| ||| ||| |||| ||||||||| ||||||||| Sbjct: 40369 tgtccgtgcggtggtgccccgtctaccgccgcaccttcaaagaccgcctc 40418 Score = 71.9 bits (36), Expect = 2e-09 Identities = 85/100 (85%), Gaps = 1/100 (1%) Strand = Plus / Plus Query: 395 gtggacatatttgtgtgtacagcggacccagctcttgaaccacccatgcttgtcatctcc 454 |||||||| ||||| ||||||||||| ||| | || ||||| ||||||||||||||| Sbjct: 40666 gtggacatttttgtctgtacagcggatccaacagcagagccaccgatgcttgtcatctcc 40725 Query: 455 acggttctgtctgtcatggc-tatgactacccgccagaga 493 || ||| ||||||||||||| |||||||||| ||| |||| Sbjct: 40726 actgttttgtctgtcatggcttatgactacctgcctgaga 40765
>dbj|AK111344.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-F12, full insert sequence Length = 513 Score = 83.8 bits (42), Expect = 5e-13 Identities = 93/110 (84%) Strand = Plus / Plus Query: 252 gggcggggctcgggctgctcgtggccgagctctggttcggcctctactgggtcctcaccc 311 ||||| |||||||| |||||| ||| ||||||||||||||| ||||||||||||| || | Sbjct: 247 gggcgtggctcgggatgctcgcggcggagctctggttcggcttctactgggtcctgacgc 306 Query: 312 tctccgtgcgctggaacccggtccgccgcaccaccttcaaggaccgcctc 361 | |||||||| ||| ||| ||| |||| ||||||||| ||||||||| Sbjct: 307 tgtccgtgcggtggtgccccgtctaccgccgcaccttcaaagaccgcctc 356
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.11 Identities = 62/75 (82%) Strand = Plus / Minus Query: 278 gagctctggttcggcctctactgggtcctcaccctctccgtgcgctggaacccggtccgc 337 ||||||||||||| | ||||||||||| |||| | ||||| || ||| ||| |||||| Sbjct: 18266345 gagctctggttcgccgtctactgggtcatcacgcagtccgtccggtggtgccccgtccgc 18266286 Query: 338 cgcaccaccttcaag 352 ||| |||||||||| Sbjct: 18266285 cgccgcaccttcaag 18266271
>dbj|AP005759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556A05 Length = 158189 Score = 46.1 bits (23), Expect = 0.11 Identities = 62/75 (82%) Strand = Plus / Minus Query: 278 gagctctggttcggcctctactgggtcctcaccctctccgtgcgctggaacccggtccgc 337 ||||||||||||| | ||||||||||| |||| | ||||| || ||| ||| |||||| Sbjct: 115069 gagctctggttcgccgtctactgggtcatcacgcagtccgtccggtggtgccccgtccgc 115010 Query: 338 cgcaccaccttcaag 352 ||| |||||||||| Sbjct: 115009 cgccgcaccttcaag 114995
>gb|AC097502.3| Homo sapiens BAC clone RP11-340B18 from 4, complete sequence Length = 168254 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 231 gcagcagcagcctggggtggc 251 ||||||||||||||||||||| Sbjct: 79200 gcagcagcagcctggggtggc 79220
>gb|AF160490.1|AF160490S1 Sylvilagus floridanus transcription factor p64 (c-myc) gene, exon 2 Length = 760 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgct 270 ||||||||||||||||||||| Sbjct: 501 gcgggcggggctcgggctgct 481
>dbj|AP000787.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-712B9, complete sequence Length = 173441 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 tagcaggcagggaggatggcc 73 ||||||||||||||||||||| Sbjct: 130273 tagcaggcagggaggatggcc 130253
>gb|AC161505.4| Mus musculus chromosome 8, clone RP24-307K17, complete sequence Length = 215514 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 gagtagcaggcagggaggatggcc 73 |||| ||||||||||||||||||| Sbjct: 58914 gagtggcaggcagggaggatggcc 58891
>ref|XM_872379.1| PREDICTED: Bos taurus similar to Myc proto-oncogene protein (c-Myc) (Transcription factor p64), transcript variant 5 (LOC511077), mRNA Length = 1888 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 596 gcgggcggggctcgggctgc 577
>ref|XM_872276.1| PREDICTED: Bos taurus similar to Myc proto-oncogene protein (c-Myc) (Transcription factor p64), transcript variant 4 (LOC511077), mRNA Length = 1804 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 596 gcgggcggggctcgggctgc 577
>ref|XM_872163.1| PREDICTED: Bos taurus similar to Myc proto-oncogene protein (c-Myc) (Transcription factor p64), transcript variant 3 (LOC511077), mRNA Length = 1816 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 536 gcgggcggggctcgggctgc 517
>ref|XM_588339.2| PREDICTED: Bos taurus similar to Myc proto-oncogene protein (c-Myc) (Transcription factor p64), transcript variant 1 (LOC511077), mRNA Length = 1891 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 599 gcgggcggggctcgggctgc 580
>gb|AY239505.1| Paraxerus vexillarius C-myc (c-myc) gene, exon 2 and partial cds Length = 525 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 374 gcgggcggggctcgggctgc 355
>gb|AY239504.1| Paraxerus ochraceus C-myc (c-myc) gene, exon 2 and partial cds Length = 622 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 419 gcgggcggggctcgggctgc 400
>gb|AY239503.1| Paraxerus cepapi C-myc (c-myc) gene, exon 2 and partial cds Length = 691 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 474 gcgggcggggctcgggctgc 455
>gb|AY239502.1| Funisciurus carruthersi C-myc (c-myc) gene, exon 2 and partial cds Length = 685 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 471 gcgggcggggctcgggctgc 452
>gb|AY239501.1| Protoxerus stangeri C-myc (c-myc) gene, exon 2 and partial cds Length = 605 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 455 gcgggcggggctcgggctgc 436
>gb|AY239500.1| Heliosciurus undulatus C-myc (c-myc) gene, exon 2 and partial cds Length = 643 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 438 gcgggcggggctcgggctgc 419
>gb|AY239499.1| Heliosciurus ruwenzorii C-myc (c-myc) gene, exon 2 and partial cds Length = 689 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 471 gcgggcggggctcgggctgc 452
>gb|AY239496.1| Tamias sibiricus C-myc (c-myc) gene, exon 2 and partial cds Length = 629 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 453 gcgggcggggctcgggctgc 434
>gb|AY239495.1| Sciurotamias davidianus C-myc (c-myc) gene, exon 2 and partial cds Length = 611 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 399 gcgggcggggctcgggctgc 380
>gb|AY239493.1| Xerus rutilus C-myc (c-myc) gene, exon 2 and partial cds Length = 690 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 472 gcgggcggggctcgggctgc 453
>gb|AY239492.1| Xerus inauris C-myc (c-myc) gene, exon 2 and partial cds Length = 688 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 467 gcgggcggggctcgggctgc 448
>gb|AY239491.1| Exilisciurus concinnus C-myc (c-myc) gene, exon 2 and partial cds Length = 551 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 471 gcgggcggggctcgggctgc 452
>gb|AY239489.1| Dremomys pernyi C-myc (c-myc) gene, exon 2 and partial cds Length = 688 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 470 gcgggcggggctcgggctgc 451
>gb|AY239487.1| Callosciurus prevostii C-myc (c-myc) gene, exon 2 and partial cds Length = 661 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 445 gcgggcggggctcgggctgc 426
>gb|AY239486.1| Callosciurus erythraeus C-myc (c-myc) gene, exon 2 and partial cds Length = 608 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 437 gcgggcggggctcgggctgc 418
>gb|AY239485.1| Microsciurus flaviventer C-myc (c-myc) gene, exon 2 and partial cds Length = 569 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 473 gcgggcggggctcgggctgc 454
>gb|AY239484.1| Sciurus stramineus C-myc (c-myc) gene, exon 2 and partial cds Length = 681 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 465 gcgggcggggctcgggctgc 446
>gb|AY239483.1| Sciurus carolinensis C-myc (c-myc) gene, exon 2 and partial cds Length = 639 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 430 gcgggcggggctcgggctgc 411
>gb|AY239482.1| Tamiasciurus hudsonicus C-myc (c-myc) gene, exon 2 and partial cds Length = 633 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 461 gcgggcggggctcgggctgc 442
>gb|AY239480.1| Sciurillus pusillus C-myc (c-myc) gene, exon 2 and partial cds Length = 686 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 471 gcgggcggggctcgggctgc 452
>gb|AY239479.1| Ratufa sp. LSUMZ M3476 C-myc (c-myc) gene, exon 2 and partial cds Length = 691 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 471 gcgggcggggctcgggctgc 452
>gb|AY239478.1| Ratufa bicolor C-myc (c-myc) gene, exon 2 and partial cds Length = 686 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 471 gcgggcggggctcgggctgc 452
>gb|AC127677.4| Mus musculus BAC clone RP24-226C2 from chromosome 8, complete sequence Length = 167913 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 gagtagcaggcagggaggatggcc 73 |||| ||||||||||||||||||| Sbjct: 122789 gagtggcaggcagggaggatggcc 122766
>emb|CR712936.2|CNS0GD1W Tetraodon nigroviridis full-length cDNA Length = 725 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 cagctccccggcgtggacat 402 |||||||||||||||||||| Sbjct: 369 cagctccccggcgtggacat 350
>emb|CR656384.2|CNS0F5FQ Tetraodon nigroviridis full-length cDNA Length = 616 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 cagctccccggcgtggacat 402 |||||||||||||||||||| Sbjct: 260 cagctccccggcgtggacat 241
>emb|CR643206.2|CNS0EV9O Tetraodon nigroviridis full-length cDNA Length = 616 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 cagctccccggcgtggacat 402 |||||||||||||||||||| Sbjct: 260 cagctccccggcgtggacat 241
>gb|BC113343.1| Bos taurus similar to Myc proto-oncogene protein (c-Myc) (Transcription factor p64), transcript variant 5, mRNA (cDNA clone MGC:138120 IMAGE:8085722), complete cds Length = 2204 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 889 gcgggcggggctcgggctgc 870
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 216 acatcccggcgaggggcagcagca 239 ||||||||||||| |||||||||| Sbjct: 4511310 acatcccggcgagtggcagcagca 4511287
>emb|CR450789.9| Zebrafish DNA sequence from clone DKEY-7P12 in linkage group 8, complete sequence Length = 144569 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 cttgaaccacccatgcttgt 447 |||||||||||||||||||| Sbjct: 43699 cttgaaccacccatgcttgt 43680
>emb|Z68501.1|OACMYC O.aries mRNA for c-myc Length = 2003 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 706 gcgggcggggctcgggctgc 687
>gb|BC086990.1| Rattus norvegicus ras homolog gene family, member V, mRNA (cDNA clone MGC:93183 IMAGE:7135643), complete cds Length = 1741 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 actgggtcctcaccctctcc 316 |||||||||||||||||||| Sbjct: 1200 actgggtcctcaccctctcc 1219
>emb|CR382297.7| Zebrafish DNA sequence from clone CH211-195D9 in linkage group 8, complete sequence Length = 49585 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 cttgaaccacccatgcttgt 447 |||||||||||||||||||| Sbjct: 29713 cttgaaccacccatgcttgt 29732
>dbj|AK124304.1| Homo sapiens cDNA FLJ42311 fis, clone TRACH2008300 Length = 2312 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 acagagccacccacatcccg 223 |||||||||||||||||||| Sbjct: 663 acagagccacccacatcccg 644
>dbj|AK096545.1| Homo sapiens cDNA FLJ39226 fis, clone OCBBF2007232 Length = 3646 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 acagagccacccacatcccg 223 |||||||||||||||||||| Sbjct: 1998 acagagccacccacatcccg 1979
>gb|AC108211.3| Homo sapiens BAC clone RP11-511I14 from 4, complete sequence Length = 222457 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 gggcagcagcagcctggggt 248 |||||||||||||||||||| Sbjct: 198434 gggcagcagcagcctggggt 198453
>gb|AC116608.1| Papio hamadryas chromosome , clone RP41-155I24, complete sequence Length = 161654 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 cctggggtggcgggcggggc 260 |||||||||||||||||||| Sbjct: 41603 cctggggtggcgggcggggc 41584
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 216 acatcccggcgaggggcagcagca 239 ||||||||||||| |||||||||| Sbjct: 4779600 acatcccggcgagcggcagcagca 4779577
>ref|NM_138542.2| Rattus norvegicus ras homolog gene family, member V (Rhov), mRNA Length = 1741 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 actgggtcctcaccctctcc 316 |||||||||||||||||||| Sbjct: 1200 actgggtcctcaccctctcc 1219
>gb|AC006466.3|AC006466 Homo sapiens BAC clone CTA-471E18 from 7p11.2-p21, complete sequence Length = 156880 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 acagagccacccacatcccg 223 |||||||||||||||||||| Sbjct: 69344 acagagccacccacatcccg 69325
>ref|NM_001009426.1| Ovis aries cellular myelocytomatosis oncogene (C-MYC), mRNA Length = 2003 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 706 gcgggcggggctcgggctgc 687
>gb|AF160484.1|AF160484S1 Tupaia glis transcription factor p64 (c-myc) gene, exon 2 Length = 757 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 498 gcgggcggggctcgggctgc 479
>ref|XM_308760.2| Anopheles gambiae str. PEST ENSANGP00000023755 (ENSANGG00000005774), partial mRNA Length = 4623 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 324 ggaacccggtccgccgcaccacct 347 |||||||||||||||||| ||||| Sbjct: 4450 ggaacccggtccgccgcatcacct 4427
>ref|XM_308759.2| Anopheles gambiae str. PEST ENSANGP00000007659 (ENSANGG00000005774), partial mRNA Length = 4536 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 324 ggaacccggtccgccgcaccacct 347 |||||||||||||||||| ||||| Sbjct: 4354 ggaacccggtccgccgcatcacct 4331
>emb|BX538156.1|HSM806358 Homo sapiens mRNA; cDNA DKFZp686A0650 (from clone DKFZp686A0650) Length = 5003 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 acagagccacccacatcccg 223 |||||||||||||||||||| Sbjct: 3336 acagagccacccacatcccg 3317
>gb|U28401.1|FLU28401 Feline leukemia virus MYC mutant (v-myc) gene, complete cds Length = 1121 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 276 gcgggcggggctcgggctgc 257
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 254 gcggggctcgggctgctcgtggcc 277 |||||||| ||||||||||||||| Sbjct: 211866 gcggggctggggctgctcgtggcc 211843
>gb|M15204.1|FCVMYCCA Feline leukemia virus v-myc gene Length = 1497 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 627 gcgggcggggctcgggctgc 608
>gb|M10973.1|FCVMYC Feline leukemia virus (defective myc recombinant) v-myc gene Length = 1744 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 633 gcgggcggggctcgggctgc 614
>gb|M25762.1|CATFTT Cat feline proviral (FTT) v-myc gene, complete cds Length = 2721 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 985 gcgggcggggctcgggctgc 966
>gb|M22727.1|CATMYCCA2 Cat c-myc gene, complete cds Length = 901 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 568 gcgggcggggctcgggctgc 549
>dbj|AB019241.1| Oryctolagus cuniculus c-myc mRNA, partial cds Length = 326 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgggcggggctcgggctgc 269 |||||||||||||||||||| Sbjct: 69 gcgggcggggctcgggctgc 50 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,364,979 Number of Sequences: 3902068 Number of extensions: 3364979 Number of successful extensions: 68450 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 70 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 68131 Number of HSP's gapped (non-prelim): 312 length of query: 495 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 473 effective length of database: 17,147,199,772 effective search space: 8110625492156 effective search space used: 8110625492156 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
