Clone Information

BLAST Search Result

Clone Name	bastl31c04
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	MSH2_MAIZE (Q9XGC9) DNA mismatch repair protein MSH2 (MUS1)	195	5e-50
2	MSH2_ARATH (O24617) DNA mismatch repair protein MSH2 (AtMsh2)	165	7e-41
3	MSH2_NEUCR (O13396) DNA mismatch repair protein msh-2	75	7e-14
4	MSH2_CERAE (Q5XXB5) DNA mismatch repair protein Msh2 (MutS prote...	68	1e-11
5	MSH2_MOUSE (P43247) DNA mismatch repair protein Msh2 (MutS prote...	67	2e-11
6	MSH2_HUMAN (P43246) DNA mismatch repair protein Msh2 (MutS prote...	67	2e-11
7	MSH2_BOVIN (Q3MHE4) DNA mismatch repair protein Msh2 (MutS prote...	64	2e-10
8	MSH2_RAT (P54275) DNA mismatch repair protein Msh2 (MutS protein...	62	1e-09
9	MSH2_SCHPO (O74773) DNA mismatch repair protein msh2	56	6e-08
10	MSH2_YEAST (P25847) DNA mismatch repair protein MSH2	52	6e-07
11	MSH2_DROME (P43248) DNA mismatch repair protein spellchecker 1	50	3e-06
12	DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in azoosp...	36	0.060
13	SEPA_EMENI (P78621) Cytokinesis protein sepA (FH1/2 protein) (Fo...	36	0.060
14	PI5PA_MOUSE (P59644) Phosphatidylinositol 4,5-bisphosphate 5-pho...	35	0.078
15	SEM6C_HUMAN (Q9H3T2) Semaphorin-6C precursor (Semaphorin Y) (Sem...	35	0.078
16	FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chlor...	33	0.39
17	GFI1_HUMAN (Q99684) Zinc finger protein Gfi-1 (Growth factor ind...	33	0.51
18	SCNAA_MOUSE (Q61180) Amiloride-sensitive sodium channel alpha-su...	33	0.51
19	WASL_RAT (O08816) Neural Wiskott-Aldrich syndrome protein (N-WASP)	33	0.51
20	CN032_MACFA (Q4R837) Protein C14orf32 homolog	32	0.66
21	MORC2_HUMAN (Q9Y6X9) MORC family CW-type zinc finger 2 (Zinc fin...	32	0.66
22	WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-W...	32	0.66
23	WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1	32	0.87
24	Y2083_MYCTU (Q10691) Hypothetical protein Rv2083/MT2145	32	1.1
25	FOXL2_MOUSE (O88470) Forkhead box protein L2 (Pituitary forkhead...	32	1.1
26	ATM_GIBZE (Q4IB89) Serine/threonine-protein kinase TEL1 (EC 2.7....	32	1.1
27	SCNAA_RAT (P37089) Amiloride-sensitive sodium channel alpha-subu...	32	1.1
28	EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline...	31	1.5
29	DSCL1_HUMAN (Q8TD84) Down syndrome cell adhesion molecule-like p...	31	1.5
30	PI5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosp...	31	1.5
31	RTN4_RAT (Q9JK11) Reticulon-4 (Neurite outgrowth inhibitor) (Nog...	31	1.5
32	ZDHC8_HUMAN (Q9ULC8) Probable palmitoyltransferase ZDHHC8 (EC 2....	31	1.5
33	RXRB_RAT (P49743) Retinoic acid receptor RXR-beta (Retinoid X re...	31	1.5
34	RXRB_MOUSE (P28704) Retinoic acid receptor RXR-beta (Retinoid X ...	31	1.9
35	CUTL2_HUMAN (O14529) Homeobox protein cut-like 2 (Homeobox prote...	31	1.9
36	PACC_ASPPA (Q96UW0) pH-response transcription factor pacC/RIM101	31	1.9
37	FOXD1_CHICK (Q98937) Forkhead box protein D1 (Brain factor-2) (H...	31	1.9
38	SDK2_CHICK (Q8AV57) Protein sidekick-2 precursor	31	1.9
39	TAF4_HUMAN (O00268) Transcription initiation factor TFIID subuni...	30	2.5
40	RTN4_MOUSE (Q99P72) Reticulon-4 (Neurite outgrowth inhibitor) (N...	30	2.5
41	RASH_MSVHA (P01115) Transforming protein p29 precursor [Contains...	30	2.5
42	LECT_SOLTU (Q9S8M0) Chitin-binding lectin 1 precursor (PL-I)	30	2.5
43	K1543_HUMAN (Q9P1Y5) Protein KIAA1543	30	2.5
44	NOTC2_MOUSE (O35516) Neurogenic locus notch homolog protein 2 pr...	30	2.5
45	SCNAA_HUMAN (P37088) Amiloride-sensitive sodium channel alpha-su...	30	2.5
46	SOX3_HUMAN (P41225) Transcription factor SOX-3	30	2.5
47	GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor (H...	30	2.5
48	PSAD_HORVU (P36213) Photosystem I reaction center subunit II, ch...	30	3.3
49	RXRB_HUMAN (P28702) Retinoic acid receptor RXR-beta (Retinoid X ...	30	3.3
50	AB1IP_BRARE (Q6PFT9) Amyloid beta A4 precursor protein-binding f...	30	3.3
51	KPC2_DROME (P13677) Protein kinase C, eye isozyme (EC 2.7.11.13)...	30	3.3
52	CN032_BOVIN (Q5E9L3) Protein C14orf32 homolog	30	3.3
53	NMDE4_HUMAN (O15399) Glutamate [NMDA] receptor subunit epsilon 4...	30	3.3
54	WASL_MOUSE (Q91YD9) Neural Wiskott-Aldrich syndrome protein (N-W...	30	3.3
55	UBP51_HUMAN (Q70EK9) Ubiquitin carboxyl-terminal hydrolase 51 (E...	30	3.3
56	MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)	30	4.3
57	G7C_MOUSE (Q9JHA8) Protein G7c precursor	30	4.3
58	OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-b...	30	4.3
59	M3K6_HUMAN (O95382) Mitogen-activated protein kinase kinase kina...	30	4.3
60	GAG_AVISY (P03327) Gag polyprotein [Contains: Core protein p19; ...	30	4.3
61	MURG_BRUME (Q8YI66) UDP-N-acetylglucosamine--N-acetylmuramyl-(pe...	30	4.3
62	MURG_BRUAB (Q57C78) UDP-N-acetylglucosamine--N-acetylmuramyl-(pe...	30	4.3
63	WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-W...	30	4.3
64	NUC1_NEUCR (P20824) Phosphorus acquisition-controlling protein	30	4.3
65	RXRB_CANFA (Q5TJF7) Retinoic acid receptor RXR-beta (Retinoid X ...	29	5.6
66	RANB9_HUMAN (Q96S59) Ran-binding protein 9 (RanBP9) (RanBP7) (Ra...	29	5.6
67	GABR2_HUMAN (O75899) Gamma-aminobutyric acid type B receptor, su...	29	5.6
68	FOXD2_HUMAN (O60548) Forkhead box protein D2 (Forkhead-related p...	29	5.6
69	EXON_HHV11 (P04294) Alkaline exonuclease (EC 3.1.11.-)	29	5.6
70	DEGX_CAEEL (Q09274) Degenerin-like protein C41C4.5 in chromosome II	29	5.6
71	DPO41_METMA (Q8PYH6) DNA polymerase IV 1 (EC 2.7.7.7) (Pol IV 1)	29	5.6
72	CJ078_MOUSE (Q8BP27) Protein C10orf78 homolog	29	5.6
73	BAZ2A_MOUSE (Q91YE5) Bromodomain adjacent to zinc finger domain ...	29	5.6
74	NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)	29	7.3
75	APA_MYCTU (Q50906) Alanine and proline-rich secreted protein apa...	29	7.3
76	APA_MYCBO (O30620) Alanine and proline-rich secreted protein apa...	29	7.3
77	ARHGB_HUMAN (O15085) Rho guanine nucleotide exchange factor 11 (...	29	7.3
78	FOXL2_HUMAN (P58012) Forkhead box protein L2	29	7.3
79	RPB1_CAEBR (P35074) DNA-directed RNA polymerase II largest subun...	29	7.3
80	TATB_PSEAE (Q9HUB4) Sec-independent protein translocase protein ...	29	7.3
81	PCD15_HUMAN (Q96QU1) Protocadherin-15 precursor	29	7.3
82	GFC1_HUMAN (P63117) HERV-F(c)1_Xq21.33 provirus ancestral Gag po...	28	9.6
83	SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1	28	9.6
84	CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor	28	9.6
85	CO8B_PAROL (Q9PVW7) Complement component C8 beta chain precursor...	28	9.6
86	FMN1B_MOUSE (Q05859) Formin-1 isoform IV (Limb deformity protein)	28	9.6
87	TOPI_DROME (Q9VH70) Testis-specific zinc finger protein topi (Pr...	28	9.6
88	SYI_NATPD (Q3ITY7) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isole...	28	9.6
89	Y406_METJA (Q57849) Hypothetical sugar kinase MJ0406	28	9.6
90	ALX4_MOUSE (O35137) Homeobox protein aristaless-like 4 (ALX-4)	28	9.6
91	WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting ...	28	9.6
92	FMN1A_MOUSE (Q05860) Formin-1 isoforms I/II/III (Limb deformity ...	28	9.6
93	AB1IP_HUMAN (Q7Z5R6) Amyloid beta A4 precursor protein-binding f...	28	9.6
94	LORI_HUMAN (P23490) Loricrin	28	9.6
95	HES2_MOUSE (O54792) Transcription factor HES-2 (Hairy and enhanc...	28	9.6

>MSH2_MAIZE (Q9XGC9) DNA mismatch repair protein MSH2 (MUS1)|
          Length = 942

 Score =  195 bits (496), Expect = 5e-50
 Identities = 94/112 (83%), Positives = 103/112 (91%)
 Frame = +2

Query: 146 MDSGDFLPEGGKLPELKLDARQAQGFISFFKKLPKDPRAIRLFDRRDYYTAHGENATFIA 325
           M+  DF PEGGKLPE KLDARQAQGFISFFKKLP+DPRA+RLFDRRDYYTAHGENATFIA
Sbjct: 1   MEGDDFTPEGGKLPEFKLDARQAQGFISFFKKLPQDPRAVRLFDRRDYYTAHGENATFIA 60

Query: 326 KAYYHTMTALRQLGGNSDGISSVSVSRAMFETIARNLLLDRTDHTLELYEGS 481
           + YYHTM+ALRQLG +SDGI S SVS+AMFETIARN+LL+RTD TLELYEGS
Sbjct: 61  RTYYHTMSALRQLGSSSDGILSASVSKAMFETIARNILLERTDCTLELYEGS 112

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>MSH2_ARATH (O24617) DNA mismatch repair protein MSH2 (AtMsh2)|
          Length = 937

 Score =  165 bits (417), Expect = 7e-41
 Identities = 78/104 (75%), Positives = 90/104 (86%)
 Frame = +2

Query: 170 EGGKLPELKLDARQAQGFISFFKKLPKDPRAIRLFDRRDYYTAHGENATFIAKAYYHTMT 349
           E  KLPELKLDA+QAQGF+SF+K LP D RA+R FDR+DYYTAHGEN+ FIAK YYHT T
Sbjct: 7   EQNKLPELKLDAKQAQGFLSFYKTLPNDTRAVRFFDRKDYYTAHGENSVFIAKTYYHTTT 66

Query: 350 ALRQLGGNSDGISSVSVSRAMFETIARNLLLDRTDHTLELYEGS 481
           ALRQLG  S+ +SSVS+SR MFETIAR+LLL+R DHT+ELYEGS
Sbjct: 67  ALRQLGSGSNALSSVSISRNMFETIARDLLLERNDHTVELYEGS 110

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>MSH2_NEUCR (O13396) DNA mismatch repair protein msh-2|
          Length = 937

 Score = 75.5 bits (184), Expect = 7e-14
 Identities = 41/87 (47%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
 Frame = +2

Query: 185 PELKLDARQAQGFISFFKKLPK-DPRAIRLFDRRDYYTAHGENATFIAKAYYHTMTALRQ 361
           PELK+D     GFI F+K LP+    AIR+FDR D+YTAHG++ATFIA+  Y T + +RQ
Sbjct: 5   PELKVD--DEHGFIRFYKSLPQLGEEAIRIFDRGDWYTAHGDDATFIARTVYKTTSVIRQ 62

Query: 362 LG-GNSDGISSVSVSRAMFETIARNLL 439
           LG  +  G+ SV+++  +F    R  L
Sbjct: 63  LGRSDHTGLPSVTMTVTVFRQFLREAL 89

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>MSH2_CERAE (Q5XXB5) DNA mismatch repair protein Msh2 (MutS protein homolog 2)|
          Length = 933

 Score = 67.8 bits (164), Expect = 1e-11
 Identities = 35/97 (36%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
 Frame = +2

Query: 191 LKLDARQAQGFISFFKKLPKDPRA-IRLFDRRDYYTAHGENATFIAKAYYHTMTALRQLG 367
           L+L++    GF+ FF+ +P+ P   +RLFDR D+YTAHGE+A   A+  + T   ++ +G
Sbjct: 9   LQLESAAEVGFVRFFQSMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68

Query: 368 -GNSDGISSVSVSRAMFETIARNLLLDRTDHTLELYE 475
              +  + SV +S+  FE+  ++LLL R  + +E+Y+
Sbjct: 69  PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYK 104

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>MSH2_MOUSE (P43247) DNA mismatch repair protein Msh2 (MutS protein homolog 2)|
          Length = 935

 Score = 67.4 bits (163), Expect = 2e-11
 Identities = 36/97 (37%), Positives = 60/97 (61%), Gaps = 2/97 (2%)
 Frame = +2

Query: 191 LKLDARQAQGFISFFKKLPKDPRA-IRLFDRRDYYTAHGENATFIAKAYYHTMTALRQLG 367
           L+L+     GF+ FF+ +P+ P   +RLFDR D+YTAHGE+A   A+  + T   ++ +G
Sbjct: 9   LQLEGAAEAGFVRFFEGMPEKPSTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68

Query: 368 -GNSDGISSVSVSRAMFETIARNLLLDRTDHTLELYE 475
              S  + SV +S+  FE+  ++LLL R  + +E+Y+
Sbjct: 69  PAGSKTLQSVVLSKMNFESFVKDLLLVR-QYRVEVYK 104

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>MSH2_HUMAN (P43246) DNA mismatch repair protein Msh2 (MutS protein homolog 2)|
          Length = 934

 Score = 67.0 bits (162), Expect = 2e-11
 Identities = 35/97 (36%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
 Frame = +2

Query: 191 LKLDARQAQGFISFFKKLPKDPRA-IRLFDRRDYYTAHGENATFIAKAYYHTMTALRQLG 367
           L+L++    GF+ FF+ +P+ P   +RLFDR D+YTAHGE+A   A+  + T   ++ +G
Sbjct: 9   LQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68

Query: 368 -GNSDGISSVSVSRAMFETIARNLLLDRTDHTLELYE 475
              +  + SV +S+  FE+  ++LLL R  + +E+Y+
Sbjct: 69  PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYK 104

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>MSH2_BOVIN (Q3MHE4) DNA mismatch repair protein Msh2 (MutS protein homolog 2)|
          Length = 934

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 35/97 (36%), Positives = 60/97 (61%), Gaps = 2/97 (2%)
 Frame = +2

Query: 191 LKLDARQAQGFISFFKKLPKDPRA-IRLFDRRDYYTAHGENATFIAKAYYHTMTALRQLG 367
           L+LD+    GF+ FF+ +P+ P   +RLFDR D+YTAH E+A   A+  + T   ++ +G
Sbjct: 9   LQLDSAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHREDALLAAREVFKTQGVVKYMG 68

Query: 368 -GNSDGISSVSVSRAMFETIARNLLLDRTDHTLELYE 475
              +  + SV +S+  FE+  ++LLL R  + +E+Y+
Sbjct: 69  PAGAKTLESVVLSKMNFESFVKDLLLVR-QYRVEVYK 104

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>MSH2_RAT (P54275) DNA mismatch repair protein Msh2 (MutS protein homolog 2)|
          Length = 933

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 33/97 (34%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
 Frame = +2

Query: 191 LKLDARQAQGFISFFKKLPKDPRA-IRLFDRRDYYTAHGENATFIAKAYYHTMTALRQLG 367
           L+L+     GF+ FF+ +P+ P   + LFDR D+YTAHGE+A   A+  + T   ++ +G
Sbjct: 9   LQLEGAAEVGFVRFFEGMPEKPSTTVGLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68

Query: 368 -GNSDGISSVSVSRAMFETIARNLLLDRTDHTLELYE 475
              +  + +V +S+  FE+  ++LLL R  + +E+Y+
Sbjct: 69  PAGAKTLQTVVLSKMNFESFVKDLLLVR-HYRVEVYK 104

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>MSH2_SCHPO (O74773) DNA mismatch repair protein msh2|
          Length = 982

 Score = 55.8 bits (133), Expect = 6e-08
 Identities = 26/71 (36%), Positives = 46/71 (64%)
 Frame = +2

Query: 227 SFFKKLPKDPRAIRLFDRRDYYTAHGENATFIAKAYYHTMTALRQLGGNSDGISSVSVSR 406
           +F++K+PKD   +R+FDR ++Y A GE+A+F+A+  YHT + L+    N    S  ++S 
Sbjct: 20  NFYEKMPKDTNTVRVFDRGEFYVAIGEDASFVAQNAYHTTSVLKH--HNVSNTSYCNLSP 77

Query: 407 AMFETIARNLL 439
           ++F   A ++L
Sbjct: 78  SLFIKFAEDVL 88

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>MSH2_YEAST (P25847) DNA mismatch repair protein MSH2|
          Length = 964

 Score = 52.4 bits (124), Expect = 6e-07
 Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 11/108 (10%)
 Frame = +2

Query: 185 PELKL-DARQAQGFISFFKKLPKDP-RAIRLFDRRDYYTAHGENATFIAKAYYHTMTALR 358
           PELK  D  + + F   +  LPK P + IRL D+ DYYT  G +A F+A + YHT + L+
Sbjct: 6   PELKFSDVSEERNFYKKYTGLPKKPLKTIRLVDKGDYYTVIGSDAIFVADSVYHTQSVLK 65

Query: 359 QLGGNSDGISS---------VSVSRAMFETIARNLLLDRTDHTLELYE 475
                 D +++         V+VS  +  T+ +  LLD   + +E+Y+
Sbjct: 66  NC--QLDPVTAKNFHEPTKYVTVSLQVLATLLKLCLLD-LGYKVEIYD 110

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>MSH2_DROME (P43248) DNA mismatch repair protein spellchecker 1|
          Length = 917

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
 Frame = +2

Query: 185 PELKLDARQAQGFISFFKKLPKDPRA-IRLFDRRDYYTAHG-ENATFIAKAYYHTMTALR 358
           P L +D    + FI F  KL + P   +R FD  D YT HG ++   +AK  Y +   + 
Sbjct: 12  PTLNMDTNARRNFIKFHAKLGEKPATTVRFFDHTDRYTVHGSDDCELVAKIVYKSTAFIG 71

Query: 359 QL--GGNSDGISSVSVSRAMFETIARNLLLDRTDHTLELY 472
            L      + +  VS+S+  FE   R LLL R ++ +E+Y
Sbjct: 72  ALLPDDKKETLQFVSMSKGNFELAVRELLLVR-NYRVEVY 110

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>DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in|
           azoospermia-associated protein 1)
          Length = 406

 Score = 35.8 bits (81), Expect = 0.060
 Identities = 22/59 (37%), Positives = 28/59 (47%)
 Frame = +1

Query: 4   GPPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLYGQRRLLAGGGK 180
           G P PP+   A  LA P      PPP+ A    S+ P   P  P G YG  + L+G G+
Sbjct: 308 GVPPPPATPGAAPLAFP------PPPSQAAPDMSKPPTAQPDFPYGQYGYGQDLSGFGQ 360

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>SEPA_EMENI (P78621) Cytokinesis protein sepA (FH1/2 protein) (Forced expression|
            inhibition of growth A)
          Length = 1790

 Score = 35.8 bits (81), Expect = 0.060
 Identities = 19/48 (39%), Positives = 21/48 (43%)
 Frame = +1

Query: 7    PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLYG 150
            PP PP+H      A P      PPP  A  +P   P  PP  P GL G
Sbjct: 1020 PPPPPAHPGLSGAAPPPPPPPPPPPPGAGAAPPPPPPPPPPPPGGLGG 1067

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>PI5PA_MOUSE (P59644) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC|
           3.1.3.56)
          Length = 1003

 Score = 35.4 bits (80), Expect = 0.078
 Identities = 27/85 (31%), Positives = 33/85 (38%), Gaps = 15/85 (17%)
 Frame = +1

Query: 7   PPNPPSHTRARSLALPL------KSLTFPPPA---------FAHISPSRSPALPPSTPAG 141
           P  P S TR+  L  P        S T PPP              SP+RSP LPP+    
Sbjct: 311 PGLPESGTRSPGLLSPTFRPGIPSSQTVPPPLRKPPRSPSRSPSRSPNRSPCLPPAPEVA 370

Query: 142 LYGQRRLLAGGGKAPGAQARCEASP 216
           L       AG G+ P    + + SP
Sbjct: 371 LPKPVTQAAGSGRCPSPNLQAQESP 395

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>SEM6C_HUMAN (Q9H3T2) Semaphorin-6C precursor (Semaphorin Y) (Sema Y)|
          Length = 930

 Score = 35.4 bits (80), Expect = 0.078
 Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 9/85 (10%)
 Frame = +1

Query: 4    GPPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLYGQRRLLAGGGKA 183
            G P+P  H  A  L L +     PP      +P+R     P+   G+ G RRL   G +A
Sbjct: 805  GGPSPRPHECASPLRLDV-----PPEGRCASAPARPALSAPAPRLGVGGGRRLPFSGHRA 859

Query: 184  P---------GAQARCEASPGFHLL 231
            P         G  +R    PG HLL
Sbjct: 860  PPALLTRVPSGGPSRYSGGPGKHLL 884

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>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 716

 Score = 33.1 bits (74), Expect = 0.39
 Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
 Frame = +1

Query: 4   GPPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSP-------ALPPSTPAGLYGQRRL 162
           G PN P  ++    A+ L S++  P A A +    SP       A+ PSTP+ L+ Q  +
Sbjct: 58  GKPNSPFSSQVALAAILLSSISSSPLALAVVDEPASPSVVIESQAVKPSTPSPLFIQNEI 117

Query: 163 LAGGGKAPGAQA 198
           L    KAP  ++
Sbjct: 118 L----KAPSPKS 125

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>GFI1_HUMAN (Q99684) Zinc finger protein Gfi-1 (Growth factor independence 1)|
          Length = 422

 Score = 32.7 bits (73), Expect = 0.51
 Identities = 17/36 (47%), Positives = 18/36 (50%)
 Frame = +1

Query: 112 PALPPSTPAGLYGQRRLLAGGGKAPGAQARCEASPG 219
           PA  P  PA LYG +R  A GG   GA   C A  G
Sbjct: 157 PAPEPGHPAALYGPKR--AAGGAGAGAPGSCSAGAG 190

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>SCNAA_MOUSE (Q61180) Amiloride-sensitive sodium channel alpha-subunit|
           (Epithelial Na+ channel alpha subunit) (Alpha ENaC)
           (Nonvoltage-gated sodium channel 1 alpha subunit)
           (SCNEA) (Alpha NaCH)
          Length = 699

 Score = 32.7 bits (73), Expect = 0.51
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
 Frame = +1

Query: 7   PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSP---ALPPST 132
           P +PP     +    PL +LT PPPA+A + PS SP   A+P S+
Sbjct: 648 PTSPPPSLPQQGTTPPL-ALTAPPPAYATLGPSASPLDSAVPGSS 691

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>WASL_RAT (O08816) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 501

 Score = 32.7 bits (73), Expect = 0.51
 Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
 Frame = +1

Query: 7   PPNPPSHTRARSLALPLKS---LTFPPPAFAHISPSRSPALPPSTPAGLYGQRRLLAGGG 177
           PP PPS     +   P  S   +  PPP    + P   PALP S P+G      L   G 
Sbjct: 307 PPPPPSRAPTAAPPPPPPSRPGVVVPPPPPNRMYPPPPPALPSSAPSGPPPPPPLSMAGS 366

Query: 178 KAP 186
            AP
Sbjct: 367 TAP 369

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>CN032_MACFA (Q4R837) Protein C14orf32 homolog|
          Length = 245

 Score = 32.3 bits (72), Expect = 0.66
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +1

Query: 19  PSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGL 144
           P H+ A++ A+       PP  +   SP  +P+ PPS P+GL
Sbjct: 12  PEHSPAKTSAVSNTKPGQPPQGWPGSSPWNNPSAPPSVPSGL 53

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>MORC2_HUMAN (Q9Y6X9) MORC family CW-type zinc finger 2 (Zinc finger CW-type|
           coiled-coil domain protein 1)
          Length = 970

 Score = 32.3 bits (72), Expect = 0.66
 Identities = 19/54 (35%), Positives = 27/54 (50%)
 Frame = +1

Query: 52  PLKSLTFPPPAFAHISPSRSPALPPSTPAGLYGQRRLLAGGGKAPGAQARCEAS 213
           P +  + P PA    +PSR P+LP   PA    +  +++   K P   AR EAS
Sbjct: 548 PQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISSTPKLPALAAREEAS 601

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>WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 505

 Score = 32.3 bits (72), Expect = 0.66
 Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
 Frame = +1

Query: 7   PPNPPSHTRARSLALP-----LKSLTFPPPAFAHISPSRSPALPPSTPAG 141
           PP PPS  RA + A P       S+  PPP    + P   PALP S P+G
Sbjct: 310 PPPPPS--RAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSG 357



 Score = 29.6 bits (65), Expect = 4.3
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +1

Query: 7   PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLYG 150
           PP PP    + ++  P  +  +PPP  A   PS +P+ PP  P  + G
Sbjct: 322 PPPPPPSRPSVAVPPPPPNRMYPPPPPA--LPSSAPSGPPPPPPSVLG 367

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>WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1|
          Length = 574

 Score = 32.0 bits (71), Expect = 0.87
 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
 Frame = +1

Query: 7   PPNPPSHTRARSL-ALP-----LKSLTFPPPAFAHISPSRSPALPPSTPAGL 144
           PP PP     RS  ALP      ++ T P P    + PS  P+LPPS P  L
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSL 439



 Score = 30.8 bits (68), Expect = 1.9
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +1

Query: 7   PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPP 126
           PP PP    A S+ LP +  + PPP     +PS     PP
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378

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>Y2083_MYCTU (Q10691) Hypothetical protein Rv2083/MT2145|
          Length = 314

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
 Frame = +1

Query: 7   PPNPPSHTRARSLALPLKSLTFPP-----PAFAHISPSRSPALPP 126
           PP P S         P KS T PP     PA AH+  +  P +PP
Sbjct: 192 PPVPTSSPPTTPAGAPTKSATMPPPGGASPASAHMGAAGMPMVPP 236

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>FOXL2_MOUSE (O88470) Forkhead box protein L2 (Pituitary forkhead factor)|
           (P-Frk)
          Length = 375

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 23/72 (31%), Positives = 27/72 (37%), Gaps = 2/72 (2%)
 Frame = +1

Query: 7   PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSP--ALPPSTPAGLYGQRRLLAGGGK 180
           PP PP H      A  L +   PPPA  H   +  P   L P++PA              
Sbjct: 282 PPPPPPHPHPHPHAHHLHAAAAPPPAPPHHGAAAPPPGQLSPASPATAAPP---APAPTS 338

Query: 181 APGAQARCEASP 216
           APG Q  C   P
Sbjct: 339 APGLQFACARQP 350

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>ATM_GIBZE (Q4IB89) Serine/threonine-protein kinase TEL1 (EC 2.7.11.1)|
           (DNA-damage checkpoint kinase TEL1) (Telomere length
           regulation protein 1) (ATM homolog)
          Length = 2813

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 20/47 (42%), Positives = 27/47 (57%)
 Frame = +1

Query: 109 SPALPPSTPAGLYGQRRLLAGGGKAPGAQARCEASPGFHLLLQEVAE 249
           SPAL  S+PA   G  R  +GG   P  Q++  A+PG   LL++V E
Sbjct: 194 SPALTRSSPAPGSGYSR--SGGRSTPSTQSQRRAAPGEGGLLKDVLE 238

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>SCNAA_RAT (P37089) Amiloride-sensitive sodium channel alpha-subunit|
           (Epithelial Na+ channel alpha subunit) (Alpha ENaC)
           (Nonvoltage-gated sodium channel 1 alpha subunit)
           (SCNEA) (Alpha NaCH)
          Length = 698

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +1

Query: 7   PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSP 114
           P +PP     + +  PL +LT PPPA+A + PS  P
Sbjct: 648 PTSPPPSLPQQGMTPPL-ALTAPPPAYATLGPSAPP 682

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>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 24/63 (38%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
 Frame = +1

Query: 16  PPSHTRARSLALPLKSLTFPPPAFAHISPSR------SPALPPSTPAGLYGQRRLLAGGG 177
           PPSH       LP  S+  PPP   H+ PSR      SP + PS P   YG      G G
Sbjct: 79  PPSHGH-----LP-PSVGGPPPHRGHLPPSRGFNPPPSPVISPSHPPPSYGAPPPSHGPG 132

Query: 178 KAP 186
             P
Sbjct: 133 HLP 135

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>DSCL1_HUMAN (Q8TD84) Down syndrome cell adhesion molecule-like protein 1|
            precursor (Down syndrome cell adhesion molecule 2)
          Length = 2053

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = +1

Query: 4    GPPNPPSHTRARSLALPLKSLTFP-PPA-FAHISPSRSPALPPSTPA 138
            G P+P +   A +  LP ++L  P PPA  A  +P  +PA PP+ P+
Sbjct: 1954 GLPHPGAPAAASTATLPQRTLAMPAPPAGTAPPAPGPTPAEPPTAPS 2000

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>PI5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC|
           3.1.3.56) (Proline-rich inositol polyphosphate
           5-phosphatase)
          Length = 1001

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 15/82 (18%)
 Frame = +1

Query: 16  PPSHTRARSLALPL------KSLTFPPPA---------FAHISPSRSPALPPSTPAGLYG 150
           P S TR+  L  P        + T PPP              SP+RSP +PP+    L  
Sbjct: 314 PESGTRSPGLLSPTFRPGIPSNQTVPPPLPKPPRSPSRSPSRSPNRSPCVPPAPEVALPR 373

Query: 151 QRRLLAGGGKAPGAQARCEASP 216
                AG GK P    + + SP
Sbjct: 374 PVTQGAGPGKCPSPNLQTQESP 395

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>RTN4_RAT (Q9JK11) Reticulon-4 (Neurite outgrowth inhibitor) (Nogo protein)|
           (Foocen) (Glut4 vesicle 20 kDa protein)
          Length = 1163

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 14/22 (63%), Positives = 14/22 (63%)
 Frame = +1

Query: 73  PPPAFAHISPSRSPALPPSTPA 138
           PPP  A  SP   PA PPSTPA
Sbjct: 141 PPPPPAGASPLAEPAAPPSTPA 162

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>ZDHC8_HUMAN (Q9ULC8) Probable palmitoyltransferase ZDHHC8 (EC 2.3.1.-) (Zinc|
           finger DHHC domain-containing protein 8) (DHHC-8) (Zinc
           finger protein 378)
          Length = 765

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 25/81 (30%), Positives = 39/81 (48%)
 Frame = +1

Query: 4   GPPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLYGQRRLLAGGGKA 183
           G P+ PS+   +++A     L  PPP+   ++  R      + P+ L GQ   LA  G A
Sbjct: 678 GTPHSPSYAGPKAVAFIHTDLPEPPPS---LTVQRDHPQLKTPPSKLNGQSPGLARLGPA 734

Query: 184 PGAQARCEASPGFHLLLQEVA 246
            G      ASP  H L+++V+
Sbjct: 735 TGPPGP-SASPTRHTLVKKVS 754

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>RXRB_RAT (P49743) Retinoic acid receptor RXR-beta (Retinoid X receptor beta)|
           (Nuclear receptor coregulator 1) (Fragment)
          Length = 458

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 23/68 (33%), Positives = 25/68 (36%), Gaps = 8/68 (11%)
 Frame = +1

Query: 7   PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLYG--------QRRL 162
           PP PP    A    +P   L  P P  +  S   SP LPP  P G  G            
Sbjct: 35  PPGPPHTPSAPPPPMPPPPLGSPFPVIS--SSMGSPGLPPPAPPGFSGPVSSPQINSTVS 92

Query: 163 LAGGGKAP 186
           L GGG  P
Sbjct: 93  LPGGGSGP 100

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>RXRB_MOUSE (P28704) Retinoic acid receptor RXR-beta (Retinoid X receptor beta)|
           (MHC class I regulatory element-binding protein
           H-2RIIBP)
          Length = 520

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 23/68 (33%), Positives = 25/68 (36%), Gaps = 8/68 (11%)
 Frame = +1

Query: 7   PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLYG--------QRRL 162
           PP PP    A    +P   L  P P  +  S   SP LPP  P G  G            
Sbjct: 97  PPGPPLTPSAPPPPMPPPPLGSPFPVIS--SSMGSPGLPPPAPPGFSGPVSSPQINSTVS 154

Query: 163 LAGGGKAP 186
           L GGG  P
Sbjct: 155 LPGGGSGP 162

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>CUTL2_HUMAN (O14529) Homeobox protein cut-like 2 (Homeobox protein Cux-2)|
           (Cut-like 2)
          Length = 1424

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 18/44 (40%), Positives = 19/44 (43%)
 Frame = +1

Query: 76  PPAFAHISPSRSPALPPSTPAGLYGQRRLLAGGGKAPGAQARCE 207
           PPAF    P  +PA P   P  L G      GGG A G  A  E
Sbjct: 446 PPAFYGAKPPTAPATPAPGPEPLGGPEPADGGGGGAAGPGAEEE 489

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>PACC_ASPPA (Q96UW0) pH-response transcription factor pacC/RIM101|
          Length = 662

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
 Frame = +1

Query: 13  NPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLY--GQRRLLAGG 174
           +PP H    S+   L S T P    A   P+ S A PPST  G++    RR   GG
Sbjct: 439 SPPHHEGGSSMYPRLPSATMPDSMTAGY-PTTSSAAPPSTLGGIFDHDDRRRYTGG 493

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>FOXD1_CHICK (Q98937) Forkhead box protein D1 (Brain factor-2) (HFH-BF-2)|
           (CBF-2) (T-14-6)
          Length = 440

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 15/86 (17%)
 Frame = +1

Query: 7   PPNPPSHTRARSLALPLKSLTFPPPAFAH-ISPSRSPALPPSTPA-------GLYGQRRL 162
           PP PP   R R+  LP   L   P  + H + P+ + +L  + P          +    +
Sbjct: 323 PPPPPPPPRRRAPLLPAAELARTPFGYPHPLGPALAASLHAAKPGSGAAVARSPFSIESI 382

Query: 163 LAGG-------GKAPGAQARCEASPG 219
           + GG       G APGA   C +  G
Sbjct: 383 IGGGPGPGLGAGPAPGAGGSCASQSG 408

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>SDK2_CHICK (Q8AV57) Protein sidekick-2 precursor|
          Length = 2177

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 19/56 (33%), Positives = 25/56 (44%)
 Frame = +1

Query: 19   PSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLYGQRRLLAGGGKAP 186
            P HT   +     +   F P A + I   ++P  PPS P  LY     LA G +AP
Sbjct: 2115 PDHTPLSNSTSTQQGSLFRPKA-SRIPTPQTPGNPPSQPGTLYRPPSSLAPGSRAP 2169

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>TAF4_HUMAN (O00268) Transcription initiation factor TFIID subunit 4|
           (Transcription initiation factor TFIID 135 kDa subunit)
           (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130)
           (TAFII130)
          Length = 1085

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 11/82 (13%)
 Frame = +1

Query: 7   PPNP--PSHTRARSLALPLKSLTFPPPAFAHIS---------PSRSPALPPSTPAGLYGQ 153
           PP P  PS   A + A P  +   PPPA A ++         P+ +PA+PP   A   G 
Sbjct: 249 PPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGS 308

Query: 154 RRLLAGGGKAPGAQARCEASPG 219
                    A G  A     PG
Sbjct: 309 AGAAPAPAPAAGGPAGVSGQPG 330

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>RTN4_MOUSE (Q99P72) Reticulon-4 (Neurite outgrowth inhibitor) (Nogo protein)|
          Length = 1162

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 14/21 (66%), Positives = 14/21 (66%)
 Frame = +1

Query: 76  PPAFAHISPSRSPALPPSTPA 138
           PPA A  SP   PA PPSTPA
Sbjct: 138 PPAPAGASPLAEPAAPPSTPA 158

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>RASH_MSVHA (P01115) Transforming protein p29 precursor [Contains: Transforming|
           protein p21]
          Length = 241

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +1

Query: 94  ISPSRSPALPPSTPAGLYGQRRLLAGGGKAPGAQARCEASPGFHLLL 234
           ++P R+PALP   P    G     +GG +APG  A  EA   + L++
Sbjct: 18  VAPVRAPALPRPAP----GAVAPASGGARAPGLAAPVEAMTEYKLVV 60

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>LECT_SOLTU (Q9S8M0) Chitin-binding lectin 1 precursor (PL-I)|
          Length = 323

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
 Frame = +1

Query: 7   PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTP-AGLYGQRRLLAGGGK 180
           PP+PPS         P  S   P P     SP   PA PP  P A  Y Q  +  GGGK
Sbjct: 163 PPSPPSPPPPSPPPPPPPSPPPPSPPPPSPSPPPPPASPPPPPPALPYPQCGIKKGGGK 221

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>K1543_HUMAN (Q9P1Y5) Protein KIAA1543|
          Length = 1249

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 26/87 (29%), Positives = 31/87 (35%), Gaps = 18/87 (20%)
 Frame = +1

Query: 10   PNPPSHTRARSLAL-PLKSLTFPP------PAFAHISPSRSPA-----------LPPSTP 135
            P  P HTR   L L PL  +  PP      P     SPS+ P             PP  P
Sbjct: 778  PRSPKHTRPAELRLAPLTRVLTPPHDVDSLPHLRKFSPSQVPVQTRSSILLAEETPPEEP 837

Query: 136  AGLYGQRRLLAGGGKAPGAQARCEASP 216
            A   G   +  G    P A+   + SP
Sbjct: 838  AARPGLIEIPLGSLADPAAEDEGDGSP 864

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>NOTC2_MOUSE (O35516) Neurogenic locus notch homolog protein 2 precursor (Notch|
           2) (Motch B) [Contains: Notch 2 extracellular
           truncation; Notch 2 intracellular domain]
          Length = 2470

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +1

Query: 349 CLKATGR*L*WNLKCQC*QGYV*DHCPQPFVR 444
           CL   G     + +CQC QG+   HC  P+VR
Sbjct: 198 CLNLPG-----SYRCQCGQGFTGQHCDSPYVR 224

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>SCNAA_HUMAN (P37088) Amiloride-sensitive sodium channel alpha-subunit|
           (Epithelial Na+ channel alpha subunit) (Alpha ENaC)
           (Nonvoltage-gated sodium channel 1 alpha subunit)
           (SCNEA) (Alpha NaCH)
          Length = 669

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 8/42 (19%)
 Frame = +1

Query: 13  NPPSHTRARSLAL--------PLKSLTFPPPAFAHISPSRSP 114
           +PPSH     ++L        P  +LT PPPA+A + P  SP
Sbjct: 612 SPPSHFCPHPMSLSLSQPGPAPSPALTAPPPAYATLGPRPSP 653

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>SOX3_HUMAN (P41225) Transcription factor SOX-3|
          Length = 446

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 21/68 (30%), Positives = 30/68 (44%)
 Frame = +1

Query: 34  ARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLYGQRRLLAGGGKAPGAQARCEAS 213
           ARS+ +   SL FPP + AH    R P+  P+   GL+       G    P   A    +
Sbjct: 21  ARSILI---SLPFPPDSLAH----RPPSSAPTESQGLFTVAAPAPGAPSPPATLAHLLPA 73

Query: 214 PGFHLLLQ 237
           P  + LL+
Sbjct: 74  PAMYSLLE 81

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>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor|
           (Hydroxyproline-rich glycoprotein 1)
          Length = 555

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 18/41 (43%), Positives = 21/41 (51%)
 Frame = +1

Query: 7   PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPS 129
           PP PPS +   S A PL     PP     + PS SP +PPS
Sbjct: 131 PPAPPSPSPP-SPAPPLPPSPAPPSPSPPVPPSPSPPVPPS 170

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>PSAD_HORVU (P36213) Photosystem I reaction center subunit II, chloroplast|
           precursor (Photosystem I 20 kDa subunit) (PSI-D)
          Length = 205

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +1

Query: 13  NPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPA 138
           +P +  R  +LA+P  S   P P FA    + +PA PP+ PA
Sbjct: 20  SPSAKPRPATLAMP-SSARGPAPLFAAAPDTPAPAAPPAEPA 60

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>RXRB_HUMAN (P28702) Retinoic acid receptor RXR-beta (Retinoid X receptor beta)|
          Length = 533

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 27/79 (34%), Positives = 28/79 (35%), Gaps = 19/79 (24%)
 Frame = +1

Query: 7   PPNPPSHTRARSLALPLKSLTFPPPA----------FAHISPSR-SPALPPSTPAGLYG- 150
           PP+PP      S A  L     PPP           F  IS S  SP LPP  P G  G 
Sbjct: 97  PPSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPFPVISSSMGSPGLPPPAPPGFSGP 156

Query: 151 -------QRRLLAGGGKAP 186
                      L GGG  P
Sbjct: 157 VSSPQINSTVSLPGGGSGP 175

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>AB1IP_BRARE (Q6PFT9) Amyloid beta A4 precursor protein-binding family B member|
           1-interacting protein (APBB1-interacting protein 1)
          Length = 646

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 6/49 (12%)
 Frame = +1

Query: 7   PPNPPSHTRARSLALP------LKSLTFPPPAFAHISPSRSPALPPSTP 135
           PP PPS       +LP      + SL  PPPAF     +  P  PP  P
Sbjct: 546 PPPPPSFVSHGGESLPPPPPDPVASLPPPPPAFTSAGGAPPPPPPPPPP 594

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>KPC2_DROME (P13677) Protein kinase C, eye isozyme (EC 2.7.11.13) (PKC)|
           (dPKC53E(EY)) (Protein INAC) (Inactivation no
           after-potential C protein) (Photoreceptor-specific PKC)
           (Eye-PKC)
          Length = 700

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 82  AFAHISPSRSPALPPSTPAGLYGQRRLLAGGGKAPG 189
           A A ++   +  LPPS P+   G +   AG GK PG
Sbjct: 2   AAAAVATPGATVLPPSVPSAAPGAKAPAAGAGKGPG 37

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>CN032_BOVIN (Q5E9L3) Protein C14orf32 homolog|
          Length = 240

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +1

Query: 7   PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGL 144
           P N P+ T A S   P +    PP  +   +P  +P+ PP+ P+GL
Sbjct: 12  PENSPAKTSAVSNTKPGQ----PPQGWPGSNPWNNPSAPPAVPSGL 53

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>NMDE4_HUMAN (O15399) Glutamate [NMDA] receptor subunit epsilon 4 precursor|
            (N-methyl D-aspartate receptor subtype 2D) (NR2D)
            (NMDAR2D) (EB11)
          Length = 1336

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 26/73 (35%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
 Frame = +1

Query: 7    PPNPPSHTRARSLALPLKSLTFP---PPAFAHISPSRSPALPPSTPAGLYGQRRLLAGGG 177
            PP PP+   A ++  PL  L F    PPA A   P   P   P    G  G       GG
Sbjct: 1030 PPAPPA-AAATAVGPPLCRLAFEDESPPAPARW-PRSDPESQPLLGPGAGGAGGTGGAGG 1087

Query: 178  KAPGAQARCEASP 216
             AP A   C A+P
Sbjct: 1088 GAPAAPPPCCAAP 1100

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>WASL_MOUSE (Q91YD9) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 501

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 14/60 (23%)
 Frame = +1

Query: 4   GPPNPPSHTRARSLALPLKSLT--------------FPPPAFAHISPSRSPALPPSTPAG 141
           GPP PP+  R      P ++ T               PPP    + P   PALP S P+G
Sbjct: 295 GPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPGVVVPPPPPNRMYPPPPPALPSSAPSG 354

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>UBP51_HUMAN (Q70EK9) Ubiquitin carboxyl-terminal hydrolase 51 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 51)
           (Ubiquitin-specific-processing protease 51)
           (Deubiquitinating enzyme 51)
          Length = 711

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
 Frame = +1

Query: 10  PNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPS-TPAGLYGQRRLLAGGGKAP 186
           P P    RARS + P   L+ PPP  A   P   P  PP+  P    G RR    G + P
Sbjct: 104 PRPRPQPRARSRSQP--GLSAPPPPPARPPPPPPPPPPPAPRPRAWRGSRRRSRPGSR-P 160

Query: 187 GAQARC 204
             +  C
Sbjct: 161 QTRRSC 166

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>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)|
          Length = 5179

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
 Frame = +1

Query: 10   PNPPSHTRARSLAL-----PLKSLTFPPPAFAHISPSRSPALPPSTPA 138
            P+PP  T    L       P+ + T PPP      P+ +P+ P +TP+
Sbjct: 1438 PSPPITTTTTPLPTTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPS 1485

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>G7C_MOUSE (Q9JHA8) Protein G7c precursor|
          Length = 891

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 26/59 (44%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = +1

Query: 16  PPSHTRARSLALPLKS---LTFPPPAFAHISPSRSPALPPSTPAGLYGQRRLLAGGGKA 183
           PP+H   R L L   S   L  P  + A + P  SPAL PST   L  Q R  AGGG A
Sbjct: 818 PPTHAFLRLLVLAQSSKDQLDGPAHSAAPVLPPVSPALLPST---LVTQGR--AGGGMA 871

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>OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-blind)|
           (L(1)omb) (Protein bifid)
          Length = 972

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +1

Query: 7   PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGL 144
           PPN  S + + + +    +     P  AH SPS   A PP+ P GL
Sbjct: 174 PPNNNSSSSSSNNSASAAAHPSHHPTAAHHSPSTGAAAPPAGPTGL 219



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 21/54 (38%), Positives = 28/54 (51%)
 Frame = +1

Query: 55  LKSLTFPPPAFAHISPSRSPALPPSTPAGLYGQRRLLAGGGKAPGAQARCEASP 216
           L S   P PA +H  P+R  ++ P+TP  L  Q R   GGG   G  A+ + SP
Sbjct: 838 LSSSPRPRPA-SHSPPTRPISMSPTTPPSLMKQPR---GGGAGAGV-AQSQHSP 886

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>M3K6_HUMAN (O95382) Mitogen-activated protein kinase kinase kinase 6 (EC|
           2.7.11.25)
          Length = 1011

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 25/78 (32%), Positives = 31/78 (39%)
 Frame = +1

Query: 7   PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLYGQRRLLAGGGKAP 186
           P + PS +   S     +S TFP P     +PS+ P  PP       G  +L      A 
Sbjct: 647 PSDAPSASPTPSANSTTQSQTFPCPQ----APSQHPPSPPKRCLSYGGTSQLRVPEEPAA 702

Query: 187 GAQARCEASPGFHLLLQE 240
              A  E S G  LL QE
Sbjct: 703 EEPASPEESSGLSLLHQE 720

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>GAG_AVISY (P03327) Gag polyprotein [Contains: Core protein p19; Core protein|
           p10]
          Length = 284

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
 Frame = +1

Query: 1   KGPPNPPSHTRARSLAL-PLKSLTFPPPAFAHISPSRSPALPPSTPAGLYGQRRLLAGGG 177
           +G   P +  R   L L P +S   PPPA     PS  P LPP  P       R+ A  G
Sbjct: 201 RGAEQPRAEPRHTGLTLGPARSARLPPPA---PLPSSLPLLPPFPP-------RVAAVPG 250

Query: 178 KAPGAQARCEASPGFH 225
            A GA     +   FH
Sbjct: 251 GAGGAPLPSLSPSFFH 266

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>MURG_BRUME (Q8YI66) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 379

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 23/52 (44%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
 Frame = +1

Query: 97  SPSRSPAL----PPSTPAGLYGQRRLLAGGGKAPGAQARCEASPGFHLLLQE 240
           +P RSP L     P TPAG   + RLL  GG + GAQ   +A P    LL E
Sbjct: 166 NPVRSPVLVAAATPYTPAGKDDRFRLLVFGG-SQGAQFFSQAIPAAVALLPE 216

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>MURG_BRUAB (Q57C78) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 379

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 23/52 (44%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
 Frame = +1

Query: 97  SPSRSPAL----PPSTPAGLYGQRRLLAGGGKAPGAQARCEASPGFHLLLQE 240
           +P RSP L     P TPAG   + RLL  GG + GAQ   +A P    LL E
Sbjct: 166 NPVRSPVLVAAATPYTPAGKDDRFRLLVFGG-SQGAQFFSQAIPAAVALLPE 216

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>WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 505

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
 Frame = +1

Query: 7   PPNPPSHTRARSLALPLKS---LTFPPPAFAHISPSRSPALPPSTPAG 141
           PP PPS     +   P  S   +  PPP    + P   PALP S P+G
Sbjct: 310 PPPPPSRAPTAAPPPPPPSRPGVGAPPPPPNRMYPPPLPALPSSAPSG 357



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +1

Query: 7   PPNPPSHTRARSL-ALPLKSLTFPPPAFAHISPSRSPALPPSTP 135
           PP PP+      L ALP  + + PPP    +S S S A PP  P
Sbjct: 335 PPPPPNRMYPPPLPALPSSAPSGPPPPPPPLSVSGSVAPPPPPP 378

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>NUC1_NEUCR (P20824) Phosphorus acquisition-controlling protein|
          Length = 823

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +1

Query: 4   GPPNPPSHTRARSLALPLKSLTFP--PPAFAHISPSRSPALPP 126
           G P PPS   A+ LALP  +L+ P   P  AH S  R+P L P
Sbjct: 549 GLPPPPSPAVAKPLALPSAALSSPQLKPDSAH-SLKRTPQLAP 590

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>RXRB_CANFA (Q5TJF7) Retinoic acid receptor RXR-beta (Retinoid X receptor beta)|
          Length = 533

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 27/79 (34%), Positives = 28/79 (35%), Gaps = 19/79 (24%)
 Frame = +1

Query: 7   PPNPPSHTRARSLALPLKSLTFPPPA----------FAHISPSR-SPALPPSTPAGLYG- 150
           PP+PP      S A  L     PPP           F  IS S  SP LPP  P G  G 
Sbjct: 97  PPSPPGLPLPPSSAPTLGGSGAPPPPPMPPPQLGSPFPVISSSMGSPGLPPPAPPGFSGP 156

Query: 151 -------QRRLLAGGGKAP 186
                      L GGG  P
Sbjct: 157 VSSPQINSTVSLPGGGSGP 175

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>RANB9_HUMAN (Q96S59) Ran-binding protein 9 (RanBP9) (RanBP7) (Ran-binding|
           protein M) (RanBPM) (BPM90) (BPM-L)
          Length = 729

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 23/72 (31%), Positives = 27/72 (37%)
 Frame = +1

Query: 7   PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLYGQRRLLAGGGKAP 186
           PP PP  T A     P      PPP  +  +P+  P  PP   AG        AGG   P
Sbjct: 72  PPPPPPATAAPPPPPPP-----PPPPASAAAPASGPPAPPGLAAGPGP-----AGGAPTP 121

Query: 187 GAQARCEASPGF 222
              A   A+  F
Sbjct: 122 ALVAGSSAAAPF 133

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>GABR2_HUMAN (O75899) Gamma-aminobutyric acid type B receptor, subunit 2|
           precursor (GABA-B receptor 2) (GABA-B-R2) (Gb2)
           (GABABR2) (G-protein coupled receptor 51) (HG20)
          Length = 941

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
 Frame = +1

Query: 4   GPPNPPSHTRARSLALPLKSLTFP--PPA--FAHISPSRSPALPPSTPAGLYGQRRLLAG 171
           GPP PP    AR L L L  L  P  P A  +A  +P   P+ PP +  GL    + +A 
Sbjct: 11  GPPPPPPPPPARLLLLLLLPLLLPLAPGAWGWARGAPRPPPSSPPLSIMGLMPLTKEVAK 70

Query: 172 GGKAPG 189
           G    G
Sbjct: 71  GSIGRG 76

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>FOXD2_HUMAN (O60548) Forkhead box protein D2 (Forkhead-related protein FKHL17)|
           (Forkhead-related transcription factor 9) (FREAC-9)
          Length = 497

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 18/70 (25%), Positives = 23/70 (32%)
 Frame = +1

Query: 10  PNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLYGQRRLLAGGGKAPG 189
           P P  H      A    +     P    + P R+ A PP  P        + AG G AP 
Sbjct: 284 PAPHPHPHPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGPPTA-----SVFAGAGSAPA 338

Query: 190 AQARCEASPG 219
                 + PG
Sbjct: 339 PAPASGSGPG 348

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>EXON_HHV11 (P04294) Alkaline exonuclease (EC 3.1.11.-)|
          Length = 626

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
 Frame = +1

Query: 1   KGPPNPPSHTRARSLALPLKSLTFPPP--AFAHISP-SRSPALPP 126
           +GP +PP   R  SL L       PPP    + + P S SP  PP
Sbjct: 28  RGPDSPPKRPRPNSLPLTTTFRPLPPPPQTTSAVDPSSHSPVNPP 72

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>DEGX_CAEEL (Q09274) Degenerin-like protein C41C4.5 in chromosome II|
          Length = 849

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
 Frame = +1

Query: 43  LALPLKSLTFPPPAFAHISPSRSPALP--PSTPAGLYGQRRLLAGGGKAPGAQARCEASP 216
           L L  ++  FP     +++P +  A+   P+T A +    R +  G K  G  A   A+ 
Sbjct: 88  LDLKFENAPFPSITICNLNPYKKSAIQSNPNTKAMMEAYSRRIGSGDKTEGIAAALSATG 147

Query: 217 GFH 225
           G H
Sbjct: 148 GLH 150

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>DPO41_METMA (Q8PYH6) DNA polymerase IV 1 (EC 2.7.7.7) (Pol IV 1)|
          Length = 365

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 20/65 (30%), Positives = 30/65 (46%)
 Frame = +2

Query: 236 KKLPKDPRAIRLFDRRDYYTAHGENATFIAKAYYHTMTALRQLGGNSDGISSVSVSRAMF 415
           KKL  +P A+ L  R+D+YT+  +    I ++Y           GN D    +SV  A  
Sbjct: 68  KKL--NPEAVFLPVRKDFYTSVSDRIMEILRSYADP--------GNGDSFEQISVDEAFL 117

Query: 416 ETIAR 430
           E+  R
Sbjct: 118 ESSER 122

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>CJ078_MOUSE (Q8BP27) Protein C10orf78 homolog|
          Length = 319

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 13  NPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPA 138
           NPPS   + +   P ++   PP + A   P  +P  PP++PA
Sbjct: 64  NPPSPPTSPAAPQPRENPPSPPTSPAAPQPRENPPSPPTSPA 105

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>BAZ2A_MOUSE (Q91YE5) Bromodomain adjacent to zinc finger domain 2A|
           (Transcription termination factor I-interacting protein
           5) (TTF-I-interacting protein 5) (Tip5)
          Length = 1850

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +1

Query: 52  PLKSLTFPPPAFAHISPSRSPALP 123
           P+ S   PP  F  +SP+ SPALP
Sbjct: 408 PVASSPVPPEVFVAVSPASSPALP 431

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>NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)|
          Length = 268

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 21/48 (43%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
 Frame = +1

Query: 7   PPNPPSHTRARSLAL----PLKSLTFPPPAFAHISPSRSPA-LPPSTP 135
           PP PPS    RS       P +SL  PP      SPS SP+  P STP
Sbjct: 136 PPPPPSPPTPRSSTPIPHPPRRSLPSPPSPSPSPSPSPSPSPSPRSTP 183

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>APA_MYCTU (Q50906) Alanine and proline-rich secreted protein apa precursor|
           (45/47 kDa antigen) (Fibronectin attachment protein)
           (Immunogenic protein MPT32) (Antigen MPT-32) (45-kDa
           glycoprotein) (FAP-B)
          Length = 325

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +1

Query: 13  NPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPA 138
           NP     A++LA  ++ L  PPPA     P+ +PA P   PA
Sbjct: 269 NPVDKGAAKALAESIRPLVAPPPA-----PAPAPAEPAPAPA 305

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>APA_MYCBO (O30620) Alanine and proline-rich secreted protein apa precursor|
           (Fibronectin attachment protein) (45/47 kDa antigen)
           (FAP-B)
          Length = 325

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +1

Query: 13  NPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPA 138
           NP     A++LA  ++ L  PPPA     P+ +PA P   PA
Sbjct: 269 NPVDKGAAKALAESIRPLVAPPPA-----PAPAPAEPAPAPA 305

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>ARHGB_HUMAN (O15085) Rho guanine nucleotide exchange factor 11 (PDZ-RhoGEF)|
          Length = 1522

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 21/71 (29%), Positives = 27/71 (38%), Gaps = 1/71 (1%)
 Frame = +1

Query: 4    GPPNPPSHTRARSLALPLKSLTFPPPAFA-HISPSRSPALPPSTPAGLYGQRRLLAGGGK 180
            GPP     T+A      +   + PP +   H     SP  P S PAG    +  L GG  
Sbjct: 1346 GPPEVEGGTKATGNCFYVSMPSGPPDSSTDHSEAPMSPPQPDSLPAGQTEPQPQLQGGND 1405

Query: 181  APGAQARCEAS 213
             P   +R   S
Sbjct: 1406 DPRRPSRSPPS 1416

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>FOXL2_HUMAN (P58012) Forkhead box protein L2|
          Length = 376

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 22/71 (30%), Positives = 26/71 (36%), Gaps = 2/71 (2%)
 Frame = +1

Query: 10  PNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSP--ALPPSTPAGLYGQRRLLAGGGKA 183
           P PP H      A  L +   PPPA  H   +  P   L P++PA              A
Sbjct: 284 PPPPPHPHPHPHAHHLHAAAAPPPAPPHHGAAAPPPGQLSPASPATAAPP---APAPTSA 340

Query: 184 PGAQARCEASP 216
           PG Q  C   P
Sbjct: 341 PGLQFACARQP 351

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>RPB1_CAEBR (P35074) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
          Length = 1853

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +1

Query: 10   PNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPA 138
            P+ P++T +     P     F  P ++  SP+ SP  P  TP+
Sbjct: 1754 PSSPTYTPSSPTYNPTSPRAFSSPQYSPTSPTYSPTSPSYTPS 1796

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>TATB_PSEAE (Q9HUB4) Sec-independent protein translocase protein tatB homolog|
          Length = 141

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = +1

Query: 13  NPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPA 138
           NPP  T   +   P  S+  PPP      P    A PP+  A
Sbjct: 86  NPPQETPPPAAESPAPSVPTPPPTSTPAVPPADAAAPPAVAA 127

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>PCD15_HUMAN (Q96QU1) Protocadherin-15 precursor|
          Length = 1955

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +1

Query: 7    PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPP 126
            PP+PPS      + LPL   TF P + +   P   P LPP
Sbjct: 1780 PPSPPS------IPLPLPPPTFFPLSVSTSGPPTPPLLPP 1813

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>GFC1_HUMAN (P63117) HERV-F(c)1_Xq21.33 provirus ancestral Gag polyprotein (Gag|
           polyprotein) [Contains: Matrix protein; Capsid protein]
          Length = 469

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +1

Query: 1   KGPPNPPSHTRARSLALPLKSLTFPPPAFAHISPS-RSPALPPSTPA 138
           K P + P      +LALP      PPP      P+  +P LPP+ P+
Sbjct: 114 KEPDSSPLSEPPEALALPPLPAALPPPYPGSSGPTPTAPPLPPTPPS 160

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>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 9/51 (17%)
 Frame = +1

Query: 1   KGPPNPPSHTRARSLALPLKSLTFPPPAFAHISPSR---------SPALPP 126
           + P  PP   R RS +LP +    PPP     SP R         SP+ PP
Sbjct: 553 RSPSPPPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPP 603

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>CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor|
          Length = 1355

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 22/72 (30%), Positives = 28/72 (38%)
 Frame = +1

Query: 4   GPPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLYGQRRLLAGGGKA 183
           GP  P   T AR  A P  +  FP PA    +P     + PS P G  G+      G + 
Sbjct: 757 GPNGPAGSTGARGDAGPSGATGFPGPAGRAGAPGPPGNVGPSGPTGHPGK-----DGSRG 811

Query: 184 PGAQARCEASPG 219
           P   +     PG
Sbjct: 812 PRGDSGPVGRPG 823

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>CO8B_PAROL (Q9PVW7) Complement component C8 beta chain precursor (Complement|
           component 8 beta subunit)
          Length = 588

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -3

Query: 146 YSPAGVEGGSAGDLLGEMCAN-AGGGKVRDF 57
           Y  AG+EGGS   LL EM  + A G  V DF
Sbjct: 389 YVSAGIEGGSCNGLLNEMGEDTAIGSSVEDF 419

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>FMN1B_MOUSE (Q05859) Formin-1 isoform IV (Limb deformity protein)|
          Length = 1206

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/46 (36%), Positives = 18/46 (39%)
 Frame = +1

Query: 7   PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGL 144
           PP PP       LALP      PPP      P  +P  PP    GL
Sbjct: 705 PPPPPPPPLPNVLALPNSGGPPPPPPPPPPPPGLAPPPPPGLSFGL 750

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>TOPI_DROME (Q9VH70) Testis-specific zinc finger protein topi (Protein|
           matotopetli)
          Length = 814

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -3

Query: 392 HLRFHQSYRPVALRQSLCD-SMPLQ*RLHSHHEQCN 288
           HLRFHQ  +P   ++  CD    ++  L+ H  +C+
Sbjct: 529 HLRFHQGVKPFVCQEENCDRKFTIRPDLNDHIRKCH 564

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>SYI_NATPD (Q3ITY7) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 1061

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -3

Query: 161 SLRCPYSPAGVEGGSAGDLLGEMCANAGGGKVRDFSGRAKLRAR 30
           S+ CP  P GV   +AGD  G+   +A    + D   +  L +R
Sbjct: 346 SVFCPVGPDGVYEDAAGDYAGQFVKDADAAIMDDLEAKGLLLSR 389

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>Y406_METJA (Q57849) Hypothetical sugar kinase MJ0406|
          Length = 302

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
 Frame = +2

Query: 173 GGKLPELKLDARQAQGFISFFKKLPKDPRAIRLFDRRDYYTAHGENATFIAKAYYHTMTA 352
           GGK+ ++      A  +I   +K P+   +I++   R YY     N          T   
Sbjct: 2   GGKMEKITCVGHTALDYIFNVEKFPEPNTSIQIPSARKYYGGAAAN----------TAVG 51

Query: 353 LRQLGGNSDGISSV--SVSRAMFETIARNL 436
           +++LG NS+ +S V      + +E   +NL
Sbjct: 52  IKKLGVNSELLSCVGYDFKNSGYERYLKNL 81

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>ALX4_MOUSE (O35137) Homeobox protein aristaless-like 4 (ALX-4)|
          Length = 399

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
 Frame = +1

Query: 37  RSLALPLKSLTFPPPAFAHISPS----RSPALPPSTPAGLYGQRRLLAGGGKAP--GAQA 198
           + LA PL+S +    +F    P     + P  PP+ PA LY QR    G  K P  G+  
Sbjct: 71  QDLAAPLESSSGARGSFNKFQPQPPTPQPPPAPPAPPAHLYLQR----GACKTPPDGSLK 126

Query: 199 RCEASPGFHLLLQ 237
             E S G +  LQ
Sbjct: 127 LQEGSGGHNAALQ 139

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>WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein)
          Length = 487

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 18/47 (38%), Positives = 19/47 (40%)
 Frame = +1

Query: 10  PNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLYG 150
           P PP  +  RS  LP      PPP      P RS  LPP  P    G
Sbjct: 328 PTPPLPSPGRSGPLPPPPTERPPPP-VRDPPGRSGPLPPPPPINRNG 373

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>FMN1A_MOUSE (Q05860) Formin-1 isoforms I/II/III (Limb deformity protein)|
          Length = 1468

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/46 (36%), Positives = 18/46 (39%)
 Frame = +1

Query: 7    PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGL 144
            PP PP       LALP      PPP      P  +P  PP    GL
Sbjct: 931  PPPPPPPPLPNVLALPNSGGPPPPPPPPPPPPGLAPPPPPGLSFGL 976

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>AB1IP_HUMAN (Q7Z5R6) Amyloid beta A4 precursor protein-binding family B member|
           1-interacting protein (APBB1-interacting protein 1)
           (Rap1-GTP-interacting adapter molecule) (RIAM)
           (Proline-rich EVH1 ligand 1) (PREL-1) (Proline-rich
           protein 73) (Retinoic ac
          Length = 666

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +1

Query: 7   PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPA 138
           PP PP          P   +  PPP++A I+ S  P  PP  PA
Sbjct: 569 PPPPPDFMEP-----PPDFVPPPPPSYAGIAGSELPPPPPPPPA 607

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>LORI_HUMAN (P23490) Loricrin|
          Length = 316

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 16/53 (30%), Positives = 23/53 (43%)
 Frame = -3

Query: 164 RSLRCPYSPAGVEGGSAGDLLGEMCANAGGGKVRDFSGRAKLRARVCDGGFGG 6
           ++++C        GGS+G   G   +  GGG V  +SG        C GG  G
Sbjct: 154 QAVQCQSYGGVSSGGSSGGGSGCFSSGGGGGSVCGYSGGGSGGGSGCGGGSSG 206

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>HES2_MOUSE (O54792) Transcription factor HES-2 (Hairy and enhancer of split 2)|
          Length = 157

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +1

Query: 25  HTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLY 147
           H R R+++    SLT PP      +P+ SP +PP   +GL+
Sbjct: 118 HLRQRTVSDDSPSLTLPPAP----APAPSPPVPPPGSSGLW 154


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,012,647
Number of Sequences: 219361
Number of extensions: 1511836
Number of successful extensions: 6714
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 5766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6599
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result