Clone Name | bastl31c02 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | PP14C_HUMAN (Q8TAE6) Protein phosphatase 1 regulatory subunit 14... | 32 | 1.2 | 2 | K1C12_HUMAN (Q99456) Keratin, type I cytoskeletal 12 (Cytokerati... | 30 | 3.5 | 3 | INSM1_MOUSE (Q63ZV0) Insulinoma-associated protein 1 (Zinc finge... | 29 | 7.8 |
---|
>PP14C_HUMAN (Q8TAE6) Protein phosphatase 1 regulatory subunit 14C| (PKC-potentiated PP1 inhibitory protein) (Kinase-enhanced PP1 inhibitor) (Serologically defined breast cancer antigen NY-BR-81) Length = 165 Score = 31.6 bits (70), Expect = 1.2 Identities = 15/27 (55%), Positives = 19/27 (70%) Frame = -1 Query: 182 VQSDAKKTAGTASRGGARFCFRSPGGG 102 V + + +TAG AS GGAR F+SP GG Sbjct: 3 VATGSSETAGGASGGGARVFFQSPRGG 29
>K1C12_HUMAN (Q99456) Keratin, type I cytoskeletal 12 (Cytokeratin-12) (CK-12)| (Keratin-12) (K12) Length = 494 Score = 30.0 bits (66), Expect = 3.5 Identities = 17/42 (40%), Positives = 19/42 (45%) Frame = -1 Query: 140 GGARFCFRSPGGGGISAVLMRALRRDMGDGRASERARGDGCG 15 GG+ F F + GGG SA M G G S A G G G Sbjct: 43 GGSAFGFGASCGGGFSAASMFGSSSGFGGGSGSSMAGGLGAG 84
>INSM1_MOUSE (Q63ZV0) Insulinoma-associated protein 1 (Zinc finger protein IA-1)| Length = 521 Score = 28.9 bits (63), Expect = 7.8 Identities = 15/55 (27%), Positives = 19/55 (34%) Frame = +1 Query: 7 PIPPQPSPLXXXXXXXXXXXXXXXXXXTAEIPPPPGERKQNLAPPRLAVPAVFFA 171 P+PP P P PPPPG R + P A PA ++ Sbjct: 50 PLPPPPPPALAERAHAALAAALACAPGPPP-PPPPGPRAAHFGNPEAAHPAPLYS 103 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,262,459 Number of Sequences: 219361 Number of extensions: 656556 Number of successful extensions: 2378 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2076 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2345 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3465624120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)