>gb|AY111306.1| Zea mays CL10099_1 mRNA sequence
          Length = 649

 Score =  198 bits (100), Expect = 1e-47
 Identities = 189/219 (86%)
 Strand = Plus / Plus

                                                                       
Query: 252 atggaggccgcggcggcgcgcaaggagtggcgcgccgtccccgacgccccgctccgcacc 311
           |||||| ||||||  |||||||||||||||||||||| ||||||| || |||||||| ||
Sbjct: 240 atggagcccgcgggcgcgcgcaaggagtggcgcgccgnccccgactcctcgctccgctcc 299

                                                                       
Query: 312 aatggcgccgaggatgccgcggagcgcatgaagatggcgcagtccgagggcagggccatc 371
           ||||||||||||||||||||||||| |  |||| ||| |||||| ||||   | || |||
Sbjct: 300 aatggcgccgaggatgccgcggagcacgggaagctggggcagtcggaggaacgagctatc 359

                                                                       
Query: 372 taccaggatgagtcgggagggctggacgacttctgctcgatcaccatcgatgggagcggt 431
           ||| |||| | | |||| || ||||| ||||||||| | |||||||| ||||||||||| 
Sbjct: 360 tacgaggaaggggcgggtggactggaggacttctgcgccatcaccattgatgggagcgga 419

                                                  
Query: 432 gggctcagcgatgacatcctgcagcagcgcctgcagagc 470
           ||||||||||| |||||||||||||||||||||||||||
Sbjct: 420 gggctcagcgaggacatcctgcagcagcgcctgcagagc 458

>ref|XM_483606.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3172

 Score =  174 bits (88), Expect = 2e-40
 Identities = 190/224 (84%)
 Strand = Plus / Plus

                                                                       
Query: 252 atggaggccgcggcggcgcgcaaggagtggcgcgccgtccccgacgccccgctccgcacc 311
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 293 atggacgccgcggcggcgcgcaaggagtggcgcgccgtccccgacgccccgctccgctcc 352

                                                                       
Query: 312 aatggcgccgaggatgccgcggagcgcatgaagatggcgcagtccgagggcagggccatc 371
           ||||||||||| ||| ||| |||||     ||||||| ||| ||||||| ||| ||||| 
Sbjct: 353 aatggcgccgacgatcccggggagcatggcaagatggggcaatccgaggacagagccatg 412

                                                                       
Query: 372 taccaggatgagtcgggagggctggacgacttctgctcgatcaccatcgatgggagcggt 431
           ||| |||| | |   ||| | ||||| || | |||||||||||||||||| || ||||| 
Sbjct: 413 tacgaggacgggggtggaagactggatgattactgctcgatcaccatcgacggaagcggg 472

                                                       
Query: 432 gggctcagcgatgacatcctgcagcagcgcctgcagagcatcgt 475
           || |||||||| |||||| | |||||||||||||||||| ||||
Sbjct: 473 ggcctcagcgaggacatcatccagcagcgcctgcagagcgtcgt 516

>dbj|AK066525.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072L17, full
           insert sequence
          Length = 3173

 Score =  174 bits (88), Expect = 2e-40
 Identities = 190/224 (84%)
 Strand = Plus / Plus

                                                                       
Query: 252 atggaggccgcggcggcgcgcaaggagtggcgcgccgtccccgacgccccgctccgcacc 311
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 293 atggacgccgcggcggcgcgcaaggagtggcgcgccgtccccgacgccccgctccgctcc 352

                                                                       
Query: 312 aatggcgccgaggatgccgcggagcgcatgaagatggcgcagtccgagggcagggccatc 371
           ||||||||||| ||| ||| |||||     ||||||| ||| ||||||| ||| ||||| 
Sbjct: 353 aatggcgccgacgatcccggggagcatggcaagatggggcaatccgaggacagagccatg 412

                                                                       
Query: 372 taccaggatgagtcgggagggctggacgacttctgctcgatcaccatcgatgggagcggt 431
           ||| |||| | |   ||| | ||||| || | |||||||||||||||||| || ||||| 
Sbjct: 413 tacgaggacgggggtggaagactggatgattactgctcgatcaccatcgacggaagcggg 472

                                                       
Query: 432 gggctcagcgatgacatcctgcagcagcgcctgcagagcatcgt 475
           || |||||||| |||||| | |||||||||||||||||| ||||
Sbjct: 473 ggcctcagcgaggacatcatccagcagcgcctgcagagcgtcgt 516

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  125 bits (63), Expect = 1e-25
 Identities = 69/71 (97%)
 Strand = Plus / Minus

                                                                            
Query: 252      atggaggccgcggcggcgcgcaaggagtggcgcgccgtccccgacgccccgctccgcacc 311
                ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 27209483 atggacgccgcggcggcgcgcaaggagtggcgcgccgtccccgacgccccgctccgctcc 27209424

                           
Query: 312      aatggcgccga 322
                |||||||||||
Sbjct: 27209423 aatggcgccga 27209413



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 64/72 (88%)
 Strand = Plus / Minus

                                                                            
Query: 404      ctgctcgatcaccatcgatgggagcggtgggctcagcgatgacatcctgcagcagcgcct 463
                |||||||||||||||||| || ||||| || |||||||| |||||| | |||||||||||
Sbjct: 27209108 ctgctcgatcaccatcgacggaagcgggggcctcagcgaggacatcatccagcagcgcct 27209049

                            
Query: 464      gcagagcatcgt 475
                ||||||| ||||
Sbjct: 27209048 gcagagcgtcgt 27209037

>dbj|AP003914.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1521_G02
          Length = 117964

 Score =  125 bits (63), Expect = 1e-25
 Identities = 69/71 (97%)
 Strand = Plus / Minus

                                                                          
Query: 252    atggaggccgcggcggcgcgcaaggagtggcgcgccgtccccgacgccccgctccgcacc 311
              ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 110516 atggacgccgcggcggcgcgcaaggagtggcgcgccgtccccgacgccccgctccgctcc 110457

                         
Query: 312    aatggcgccga 322
              |||||||||||
Sbjct: 110456 aatggcgccga 110446



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 64/72 (88%)
 Strand = Plus / Minus

                                                                          
Query: 404    ctgctcgatcaccatcgatgggagcggtgggctcagcgatgacatcctgcagcagcgcct 463
              |||||||||||||||||| || ||||| || |||||||| |||||| | |||||||||||
Sbjct: 110141 ctgctcgatcaccatcgacggaagcgggggcctcagcgaggacatcatccagcagcgcct 110082

                          
Query: 464    gcagagcatcgt 475
              ||||||| ||||
Sbjct: 110081 gcagagcgtcgt 110070

>dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0623F08
          Length = 154540

 Score =  125 bits (63), Expect = 1e-25
 Identities = 69/71 (97%)
 Strand = Plus / Minus

                                                                         
Query: 252   atggaggccgcggcggcgcgcaaggagtggcgcgccgtccccgacgccccgctccgcacc 311
             ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 32686 atggacgccgcggcggcgcgcaaggagtggcgcgccgtccccgacgccccgctccgctcc 32627

                        
Query: 312   aatggcgccga 322
             |||||||||||
Sbjct: 32626 aatggcgccga 32616



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 64/72 (88%)
 Strand = Plus / Minus

                                                                         
Query: 404   ctgctcgatcaccatcgatgggagcggtgggctcagcgatgacatcctgcagcagcgcct 463
             |||||||||||||||||| || ||||| || |||||||| |||||| | |||||||||||
Sbjct: 32311 ctgctcgatcaccatcgacggaagcgggggcctcagcgaggacatcatccagcagcgcct 32252

                         
Query: 464   gcagagcatcgt 475
             ||||||| ||||
Sbjct: 32251 gcagagcgtcgt 32240

>gb|AF305872.2| Homo sapiens chromosome 8 clone CTD-2182N23 map 8q24.3 , complete
              sequence
          Length = 134215

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 113    tccccccatcggcctccagcc 133
              |||||||||||||||||||||
Sbjct: 120748 tccccccatcggcctccagcc 120768

>gb|AF235100.4| Homo sapiens chromosome 8 clone RP11-98A24 map 8q24.3 , complete
             sequence
          Length = 129619

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 113   tccccccatcggcctccagcc 133
             |||||||||||||||||||||
Sbjct: 17626 tccccccatcggcctccagcc 17646

>gb|AC124316.32| Mus musculus chromosome 17, clone RP24-222O13, complete sequence
          Length = 223552

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 4      ggcatcccgccgcctcctctc 24
              |||||||||||||||||||||
Sbjct: 113989 ggcatcccgccgcctcctctc 114009

>gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (Lrr19), TAK19-1 (Tak19-1), and
             LRK19 (Lrk19) genes, complete cds
          Length = 35872

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 426   agcggtgggctcagcgatgacatcc 450
             |||||||||||| ||||||||||||
Sbjct: 17785 agcggtgggctcggcgatgacatcc 17809

>emb|Y18319.1|SLAP18319 Homo sapiens SLAP gene, clone SEQ.A1
          Length = 2939

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 113 tccccccatcggcctccagcc 133
           |||||||||||||||||||||
Sbjct: 842 tccccccatcggcctccagcc 822

>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 118    ccatcggcctccagccggcg 137
              ||||||||||||||||||||
Sbjct: 831695 ccatcggcctccagccggcg 831676

>ref|XM_366100.1| Magnaporthe grisea 70-15 hypothetical protein (MG10320.4) partial
          mRNA
          Length = 2169

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 5  gcatcccgccgcctcctctc 24
          ||||||||||||||||||||
Sbjct: 46 gcatcccgccgcctcctctc 65

>gb|AY650399.1| Homo sapiens cell division cycle 34 (CDC34) gene, complete cds
          Length = 14358

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 346 tggcgcagtccgagggcagggcca 369
           |||| |||||||||||||||||||
Sbjct: 563 tggcacagtccgagggcagggcca 586

>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 448     tcctgcagcagcgcctgcag 467
               ||||||||||||||||||||
Sbjct: 3873140 tcctgcagcagcgcctgcag 3873159

>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 434     gctcagcgatgacatcctgc 453
               ||||||||||||||||||||
Sbjct: 4788440 gctcagcgatgacatcctgc 4788421

>gb|AC130551.4| Mus musculus BAC clone RP24-538J2 from chromosome 9, complete sequence
          Length = 189707

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    ccctagcccctccccccatc 122
              ||||||||||||||||||||
Sbjct: 188108 ccctagcccctccccccatc 188127

>emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete chromosome; segment 3/12
          Length = 300000

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    atcggcctccagccggcgct 139
              ||||||||||||||||||||
Sbjct: 119368 atcggcctccagccggcgct 119349

>gb|AC100550.7| Mus musculus chromosome 9, clone RP23-152P11, complete sequence
          Length = 188119

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 103  ccctagcccctccccccatc 122
            ||||||||||||||||||||
Sbjct: 8133 ccctagcccctccccccatc 8152

>emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome; segment 3/13
          Length = 349564

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 118    ccatcggcctccagccggcg 137
              ||||||||||||||||||||
Sbjct: 145232 ccatcggcctccagccggcg 145213

>emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 3/14
          Length = 320050

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 118    ccatcggcctccagccggcg 137
              ||||||||||||||||||||
Sbjct: 164327 ccatcggcctccagccggcg 164308

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 313     atggcgccgaggatgccgcg 332
               ||||||||||||||||||||
Sbjct: 2772107 atggcgccgaggatgccgcg 2772126

>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 187     agccccgccgccagatcccg 206
               ||||||||||||||||||||
Sbjct: 1991878 agccccgccgccagatcccg 1991859

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 448     tcctgcagcagcgcctgcag 467
               ||||||||||||||||||||
Sbjct: 3506280 tcctgcagcagcgcctgcag 3506261

>gb|AC011531.7|AC011531 Homo sapiens chromosome 19 clone LLNLR-231G5, complete sequence
          Length = 36377

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 346   tggcgcagtccgagggcagggcca 369
             |||| |||||||||||||||||||
Sbjct: 19784 tggcacagtccgagggcagggcca 19807

>gb|U77912.1|MBU77912 Mycobacterium bovis MBE50a gene, partial cds; and MBE50b, MBE50c,
            preprotein translocase SecY subunit (secY), adenylate
            kinase (adk), methionine aminopeptidase (map), RNA
            polymerase ECF sigma factor (sigE50), MBE50d, and MBE50e
            genes, complete cds
          Length = 7163

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 118  ccatcggcctccagccggcg 137
            ||||||||||||||||||||
Sbjct: 6961 ccatcggcctccagccggcg 6942

>gb|AF478411.1| Chlamydomonas reinhardtii iron transporter Ftr1 (FTR1) mRNA,
           complete cds
          Length = 2833

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 122 cggcctccagccggcgcttc 141
           ||||||||||||||||||||
Sbjct: 619 cggcctccagccggcgcttc 600


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,715,581
Number of Sequences: 3902068
Number of extensions: 2715581
Number of successful extensions: 63259
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62505
Number of HSP's gapped (non-prelim): 753
length of query: 475
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 453
effective length of database: 17,147,199,772
effective search space: 7767681496716
effective search space used: 7767681496716
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)