ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl31b02 |
|---|---|
| Clone Library Name | barley_pub |
>RPP13_ARATH (Q9M667) Disease resistance protein RPP13 (Resistance to| Peronospora parasitica protein 13) Length = 835 Score = 40.0 bits (92), Expect = 0.002 Identities = 22/69 (31%), Positives = 41/69 (59%) Frame = +1 Query: 211 MDEYNLHKRVKKDVEFLSKELESMHAALIKVGDVPRDQLDRQVKLWAGEVRELSYDMEDV 390 ++E ++ VK+D+E L EL +H L V R++ D K W+ V + +YD+EDV Sbjct: 18 IEEASMFMAVKEDLEELKTELTCIHGYLKDVE--AREREDEVSKEWSKLVLDFAYDVEDV 75 Query: 391 VDKFLVRVD 417 +D + ++++ Sbjct: 76 LDTYHLKLE 84
>R13L3_ARATH (Q9STE7) Putative disease resistance RPP13-like protein 3| Length = 847 Score = 38.5 bits (88), Expect = 0.007 Identities = 21/60 (35%), Positives = 35/60 (58%) Frame = +1 Query: 238 VKKDVEFLSKELESMHAALIKVGDVPRDQLDRQVKLWAGEVRELSYDMEDVVDKFLVRVD 417 VK D+E L EL +H L V R++ D K W V +++YD+EDV+D + ++++ Sbjct: 27 VKDDLEELKTELTCIHGYLKDVE--AREREDEVSKEWTKLVLDIAYDIEDVLDTYFLKLE 84
>R13L2_ARATH (Q9STE5) Putative disease resistance RPP13-like protein 2| Length = 847 Score = 34.3 bits (77), Expect = 0.13 Identities = 20/60 (33%), Positives = 33/60 (55%) Frame = +1 Query: 238 VKKDVEFLSKELESMHAALIKVGDVPRDQLDRQVKLWAGEVRELSYDMEDVVDKFLVRVD 417 VK D+E L EL + L V D+ D K W V +++YD+EDV+D + ++++ Sbjct: 27 VKDDLEELKTELTCIQVYLKNVEVC--DKEDEVSKEWTKLVLDIAYDVEDVLDTYFLKLE 84
>RRFC_DAUCA (P37706) Ribosome recycling factor, chloroplast precursor| (Ribosome-releasing factor, chloroplast) (Nuclear located protein D2) (Fragment) Length = 227 Score = 33.9 bits (76), Expect = 0.17 Identities = 21/66 (31%), Positives = 36/66 (54%) Frame = +1 Query: 226 LHKRVKKDVEFLSKELESMHAALIKVGDVPRDQLDRQVKLWAGEVRELSYDMEDVVDKFL 405 L K V K E L ++ IK D+L+++ KL V++LS D++ V+D+++ Sbjct: 155 LSKIVAKQAEEGKVALRNIRRDAIK----SYDKLEKEKKLSEDNVKDLSSDLQKVIDEYI 210 Query: 406 VRVDGI 423 +VD I Sbjct: 211 KKVDSI 216
>DRL4_ARATH (Q9SX38) Putative disease resistance protein At1g50180| Length = 839 Score = 33.1 bits (74), Expect = 0.29 Identities = 18/56 (32%), Positives = 33/56 (58%) Frame = +1 Query: 250 VEFLSKELESMHAALIKVGDVPRDQLDRQVKLWAGEVRELSYDMEDVVDKFLVRVD 417 V+ L EL+ ++ L K D + + +R V+ W +RE SYD ED+++ F ++ + Sbjct: 31 VKQLQDELKRLNCFL-KDADEKQHESER-VRNWVAGIREASYDAEDILEAFFLKAE 84
>RP8L1_ARATH (O04093) Putative disease resistance protein RPP8-like protein 1| Length = 821 Score = 31.6 bits (70), Expect = 0.85 Identities = 16/57 (28%), Positives = 36/57 (63%) Frame = +1 Query: 238 VKKDVEFLSKELESMHAALIKVGDVPRDQLDRQVKLWAGEVRELSYDMEDVVDKFLV 408 + + V+ L ++L + + L+K D + + +R V+ + +VR++ YD ED+++ FL+ Sbjct: 27 IGEQVDGLKRQLGRLQS-LLKDADAKKHESER-VRNFLEDVRDIVYDAEDIIESFLL 81
>RP8L2_ARATH (Q9MAG6) Probable disease resistance RPP8-like protein 2| Length = 1271 Score = 30.8 bits (68), Expect = 1.5 Identities = 14/57 (24%), Positives = 37/57 (64%) Frame = +1 Query: 238 VKKDVEFLSKELESMHAALIKVGDVPRDQLDRQVKLWAGEVRELSYDMEDVVDKFLV 408 + + V+ L ++L + + L+K D +++ +R V+ + +V+++ YD +D+++ FL+ Sbjct: 27 IDEQVDGLKRQLGRLQS-LLKDADAKKNETER-VRNFLEDVKDIVYDADDIIESFLL 81
>YQ38_CAEEL (Q09459) Hypothetical protein C09G5.8| Length = 1531 Score = 30.8 bits (68), Expect = 1.5 Identities = 22/54 (40%), Positives = 26/54 (48%) Frame = -1 Query: 393 DDILHVVGELSDLAGPELDLPVELVPRHVANLDEGSVHALKLLAEELDIFLDAL 232 DD+ V EL +GPE + VE P VA +E LK EEL L AL Sbjct: 1217 DDVAPVDPELEPESGPEPEPVVESEPNEVAETEEDRKRELK--TEELKSLLGAL 1268
>M11P_SCVM1 (P01546) M1-1 protoxin precursor (Killer toxin K1) [Contains: M1-1| delta chain; M1-1 alpha chain; M1-1 gamma immunity chain; M1-1 beta chain] Length = 316 Score = 30.4 bits (67), Expect = 1.9 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = -1 Query: 387 ILHVVGELSDLAGPELDLPVELVPRHVANLDE 292 +LH+V L+D+AGP PV L+PR D+ Sbjct: 20 LLHLVVALNDVAGPAETAPVSLLPREAPWYDK 51
>RX24L_ARATH (Q9C646) Probable disease resistance protein RXW24L| Length = 899 Score = 30.0 bits (66), Expect = 2.5 Identities = 17/65 (26%), Positives = 34/65 (52%) Frame = +1 Query: 217 EYNLHKRVKKDVEFLSKELESMHAALIKVGDVPRDQLDRQVKLWAGEVRELSYDMEDVVD 396 EY+ K V+ V L L + + L K D + + V+ E++++ YD ED+++ Sbjct: 18 EYDQFKGVEDQVTELKSNLNLLKSFL-KDADAKK-HISEMVRHCVEEIKDIVYDTEDIIE 75 Query: 397 KFLVR 411 F+++ Sbjct: 76 TFILK 80
>RCOR_CAEEL (Q18919) REST corepressor spr-1 (CoREST) (Suppressor of presenilin| 1) Length = 558 Score = 30.0 bits (66), Expect = 2.5 Identities = 13/41 (31%), Positives = 23/41 (56%) Frame = -1 Query: 405 EELVDDILHVVGELSDLAGPELDLPVELVPRHVANLDEGSV 283 E + + V E S +AGPE D+P E + +V ++E ++ Sbjct: 9 ESAQSEKVDVPSEESTIAGPETDIPAETIEENVPEVEENTL 49
>AKA11_HUMAN (Q9UKA4) A-kinase anchor protein 11 (Protein kinase A-anchoring| protein 11) (PRKA11) (A kinase anchor protein 220 kDa) (AKAP 220) (hAKAP220) Length = 1901 Score = 30.0 bits (66), Expect = 2.5 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = -1 Query: 366 LSDLAGPELDLPVELVPRHVANLDEGSVHALKLLAEELDIFLDALVQ 226 + DLA L+LP L H +L+E + +K + + LDI D L Q Sbjct: 71 IQDLAAVSLELPDILNSLHFCSLNENEIICMKNINKPLDISSDPLNQ 117
>ARGA_PASMU (Q9CMJ6) Amino-acid acetyltransferase (EC 2.3.1.1)| (N-acetylglutamate synthase) (AGS) (NAGS) Length = 440 Score = 29.6 bits (65), Expect = 3.2 Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 17/105 (16%) Frame = -1 Query: 429 RMNAVNTYEELVDDILHVVGELS-DLAGPELDLPVELVPRHVAN---------------- 301 R+N + ++L D + ++G ++ + G +LP E + +A Sbjct: 148 RINTESIQQQLDRDAIVLIGPIAPSVTGESFNLPFEEIASQLAIKLKAEKLIGFSATQGI 207 Query: 300 LDEGSVHALKLLAEELDIFLDALVQVVLIHEQQAQLGEQAAHAPR 166 LDE + LL ++ +++L L+Q H QA+ + A A R Sbjct: 208 LDENNQTISDLLPQDAELYLAKLIQQNQYHSSQARFLQAAIEACR 252
>C71A2_SOLME (P37118) Cytochrome P450 71A2 (EC 1.14.-.-) (CYPLXXIA2) (P-450EG4)| Length = 505 Score = 28.9 bits (63), Expect = 5.5 Identities = 19/73 (26%), Positives = 40/73 (54%), Gaps = 1/73 (1%) Frame = -1 Query: 411 TYEELVDDILHVVGELSDLAGPELDLPVELVPR-HVANLDEGSVHALKLLAEELDIFLDA 235 TY+E I H++ + +L G + + +PR N G +K +A+ELD+FL+ Sbjct: 195 TYDEKESGIEHIIEQFVELLG--IFNVGDYIPRLEWVNKFTGLDAKVKKVAKELDMFLEI 252 Query: 234 LVQVVLIHEQQAQ 196 +++ +I +++ + Sbjct: 253 VIEEHIIRKKKEE 265
>TRA6_BURCE (P24575) Transposase for insertion sequence element IS406| Length = 388 Score = 28.9 bits (63), Expect = 5.5 Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Frame = -1 Query: 378 VVGELSDLAGPELDLPVELVPRHVANLDEG-SVHALKLLAEELDIFLDALVQVV 220 V+ L L GPE+ L V R A LDEG + L E +FLDA + V Sbjct: 119 VIDVLQRLLGPEISLSSAQVSRAAAKLDEGLRAWRERPLGETPYLFLDARYEKV 172
>PFD4_ARATH (Q9M4B5) Probable prefoldin subunit 4 (ABI3-interacting protein 3)| Length = 128 Score = 28.5 bits (62), Expect = 7.2 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%) Frame = -1 Query: 276 LKLLAEELDIFLDALVQVVLIHEQQA--QLGEQAAHAPRDDLHEQL 145 +K E+ + DA +++L E+ Q+GE AH PRDD+ ++ Sbjct: 38 IKSAKEKCENLEDAGNELILADEEMVRFQIGEVFAHVPRDDVETKI 83
>KUP1_BRAJA (Q89NN6) Probable potassium transport system protein kup 1| Length = 657 Score = 28.5 bits (62), Expect = 7.2 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = -1 Query: 219 LIHEQQAQLGEQAAHAPRDDLHEQLSLQPIS*K 121 ++HE L + AH PR DL E+ ++ IS K Sbjct: 535 VLHEHNVVLTIETAHTPRVDLSERFRMEKISDK 567
>DRL13_ARATH (Q9XIF0) Putative disease resistance protein At1g59780| Length = 906 Score = 28.5 bits (62), Expect = 7.2 Identities = 16/65 (24%), Positives = 34/65 (52%) Frame = +1 Query: 217 EYNLHKRVKKDVEFLSKELESMHAALIKVGDVPRDQLDRQVKLWAGEVRELSYDMEDVVD 396 EY + V++ + L +L+ + A L + Q + E++E++YD ED+++ Sbjct: 25 EYERFQGVEEQITELRDDLKMLMAFLSDAD--AKKQTRALARNCLEEIKEITYDAEDIIE 82 Query: 397 KFLVR 411 FL++ Sbjct: 83 IFLLK 87
>PAAC_ECOLI (P76079) Phenylacetic acid degradation protein paaC| Length = 248 Score = 28.1 bits (61), Expect = 9.4 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Frame = -2 Query: 134 QSARNLWRFTAEQNTAPEADTA-AAVSLSIRPLAQAVKHETQVF 6 Q+ LWRFTAE A E D A + +++ P E +VF Sbjct: 157 QAINKLWRFTAELFDADEIDIALSEEGIAVDPRTLRAAWEAEVF 200
>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)| Length = 603 Score = 28.1 bits (61), Expect = 9.4 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 3/75 (4%) Frame = -1 Query: 348 PELDLPVELVPRHVANLDEGSVHALKLLAEELDIFLDALVQVVLIHEQQAQLGEQAAHAP 169 P+L+ E++ H N+ G L+ +AEE D+F A ++ + L E A Sbjct: 458 PDLEARFEILQVHTRNMTLGDDVDLRKIAEETDLFTGAELEGLCRESGTVSLRENIAATA 517 Query: 168 RDDLHEQL---SLQP 133 + H Q SL+P Sbjct: 518 VFNRHFQTAKSSLKP 532
>DRL9_ARATH (Q8W3K0) Probable disease resistance protein At1g58602| Length = 1138 Score = 28.1 bits (61), Expect = 9.4 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 5/77 (6%) Frame = +1 Query: 217 EYNLHKRVKKDVEFLSKELESMHAALIKVGDVPRDQLDRQVKLWAGEVRELSYDMEDVVD 396 EY L + V+ V L +L + + L K D + V+ E++++ YD EDV++ Sbjct: 20 EYTLFQGVEDQVAELKSDLNLLKSFL-KDADAKK-HTSALVRYCVEEIKDIVYDAEDVLE 77 Query: 397 KFLVR-----VDGIHPH 432 F+ + GI H Sbjct: 78 TFVQKEKLGTTSGIRKH 94
>Y328_MYCGE (Q49419) Hypothetical protein MG328| Length = 756 Score = 28.1 bits (61), Expect = 9.4 Identities = 24/88 (27%), Positives = 40/88 (45%) Frame = -1 Query: 375 VGELSDLAGPELDLPVELVPRHVANLDEGSVHALKLLAEELDIFLDALVQVVLIHEQQAQ 196 V EL D EL L + + + +L E + + L +E+D L + H + Sbjct: 233 VDELDDYNNKELLLENADLKKQIDDLKENNNDQIFDLEQEIDDLKRRLSEEKSKHLHTKK 292 Query: 195 LGEQAAHAPRDDLHEQLSLQPIS*KPLA 112 L + RD L+EQL +P++ PL+ Sbjct: 293 LQDDLLQENRD-LYEQLQNKPVAINPLS 319
>ARNC_SHIFL (Q7UC63) Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose| transferase (EC 2.7.8.-) (Undecaprenyl-phosphate Ara4FN transferase) (Ara4FN transferase) Length = 322 Score = 28.1 bits (61), Expect = 9.4 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -1 Query: 381 HVVGELSDLAGPELDLPVELVPRHVANLDEG 289 HV G+L +L P E +PR VA DEG Sbjct: 90 HVTGDLIITLDADLQNPPEEIPRLVAKADEG 120
>ARNC_ECOLI (P77757) Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose| transferase (EC 2.7.8.-) (Undecaprenyl-phosphate Ara4FN transferase) (Ara4FN transferase) (Polymyxin resistance protein pmrF) Length = 322 Score = 28.1 bits (61), Expect = 9.4 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -1 Query: 381 HVVGELSDLAGPELDLPVELVPRHVANLDEG 289 HV G+L +L P E +PR VA DEG Sbjct: 90 HVTGDLIITLDADLQNPPEEIPRLVAKADEG 120
>ARNC_ECOL6 (Q8FFM2) Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose| transferase (EC 2.7.8.-) (Undecaprenyl-phosphate Ara4FN transferase) (Ara4FN transferase) Length = 322 Score = 28.1 bits (61), Expect = 9.4 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -1 Query: 381 HVVGELSDLAGPELDLPVELVPRHVANLDEG 289 HV G+L +L P E +PR VA DEG Sbjct: 90 HVTGDLIITLDADLQNPPEEIPRLVAKADEG 120
>ARNC_ECO57 (Q8XDZ5) Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose| transferase (EC 2.7.8.-) (Undecaprenyl-phosphate Ara4FN transferase) (Ara4FN transferase) Length = 322 Score = 28.1 bits (61), Expect = 9.4 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -1 Query: 381 HVVGELSDLAGPELDLPVELVPRHVANLDEG 289 HV G+L +L P E +PR VA DEG Sbjct: 90 HVTGDLIITLDADLQNPPEEIPRLVAKADEG 120 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,358,396 Number of Sequences: 219361 Number of extensions: 544481 Number of successful extensions: 2824 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 2784 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2824 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
