ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl31b02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 442 bits (223), Expect = e-121 Identities = 292/315 (92%) Strand = Plus / Minus Query: 118 aggtttctagctgattggttgcaaagagagctgctcatggaggtcgtcacggggggcatg 177 |||||||||| |||||| ||| ||||||||||||||||||||||||||||||| | |||| Sbjct: 190528 aggtttctaggtgattgtttgtaaagagagctgctcatggaggtcgtcacgggtgccatg 190469 Query: 178 ggcagcctgctccccaagctgggcctgctgctcatggatgagtacaacttgcacaagcgc 237 |||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||| Sbjct: 190468 ggcagcctgctccccaagcttggccagctgctcatggatgagtacaacctgcacaagcgc 190409 Query: 238 gtcaagaaagatgtcgagttcctcagcaaggagcttgagagcatgcacgctgccctcatc 297 ||||||||||| ||| |||||| || |||||||||||||||||||||||||||| || Sbjct: 190408 gtcaagaaagacgtccgcttcctctccagggagcttgagagcatgcacgctgccctcgtc 190349 Query: 298 aaggttggcgacgtgccgcgggaccagctcgacaggcaggtcaagctctgggccggcgag 357 ||||||||||||||||||||||| |||||||||| || || ||||||||||||| |||| Sbjct: 190348 aaggttggcgacgtgccgcgggatcagctcgacacacaagttaagctctgggccgacgag 190289 Query: 358 gtcagagagctctcctacgacatggaggatgtcgtcgacaagttcctcgtacgtgttgac 417 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 190288 gtcagagaactctcctacgacatggaggatgtcgtcgacaagttcctcgtacgtgttgac 190229 Query: 418 ggcattcatcctcac 432 ||||||||||||||| Sbjct: 190228 ggcattcatcctcac 190214 Score = 268 bits (135), Expect = 1e-68 Identities = 228/259 (88%) Strand = Plus / Plus Query: 174 catgggcagcctgctccccaagctgggcctgctgctcatggatgagtacaacttgcacaa 233 |||||| |||||||||||||||||||||| | |||||||||| |||||||| ||||||| Sbjct: 207937 catgggaagcctgctccccaagctgggccagttgctcatggaggagtacaagctgcacaa 207996 Query: 234 gcgcgtcaagaaagatgtcgagttcctcagcaaggagcttgagagcatgcacgctgccct 293 ||||||||||| |||||||||||||| | ||||||||||||||||||||| ||||||| Sbjct: 207997 acgcgtcaagaatgatgtcgagttcctgcggaaggagcttgagagcatgcacactgccct 208056 Query: 294 catcaaggttggcgacgtgccgcgggaccagctcgacaggcaggtcaagctctgggccgg 353 ||||||||||| || || |||||| |||||||||||| ||| |||||||||||||||| Sbjct: 208057 tatcaaggttggtgaggtaccgcggcaccagctcgacaagcaagtcaagctctgggccga 208116 Query: 354 cgaggtcagagagctctcctacgacatggaggatgtcgtcgacaagttcctcgtacgtgt 413 || || ||||| ||||||||| ||||||||||||| || |||||||||||||||||||| Sbjct: 208117 tgaagttagagacctctcctacaacatggaggatgtggttgacaagttcctcgtacgtgt 208176 Query: 414 tgacggcattcatcctcac 432 || ||| || |||||||| Sbjct: 208177 cgatggcgttgatcctcac 208195 Score = 208 bits (105), Expect = 1e-50 Identities = 177/201 (88%) Strand = Plus / Plus Query: 217 gagtacaacttgcacaagcgcgtcaagaaagatgtcgagttcctcagcaaggagcttgag 276 ||||||||| ||| |||| | ||||| ||| |||||||||||||| | | |||||||||| Sbjct: 121293 gagtacaacctgcgcaagagtgtcaaaaaaaatgtcgagttcctccggagggagcttgag 121352 Query: 277 agcatgcacgctgccctcatcaaggttggcgacgtgccgcgggaccagctcgacaggcag 336 | ||||||| ||| |||||||||||||| ||| ||||||||||| ||||||||||| || Sbjct: 121353 atcatgcacactgtcctcatcaaggttgacgaggtgccgcgggagcagctcgacagtcaa 121412 Query: 337 gtcaagctctgggccggcgaggtcagagagctctcctacgacatggaggatgtcgtcgac 396 || ||| ||||||||| |||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 121413 gttaagatctgggccgacgaggtcagagagctctcctacaacatggaggatgtcatcgac 121472 Query: 397 aagttcctcgtacgtgttgac 417 |||| ||||||||| |||||| Sbjct: 121473 aagtgcctcgtacgggttgac 121493 Score = 208 bits (105), Expect = 1e-50 Identities = 177/201 (88%) Strand = Plus / Plus Query: 217 gagtacaacttgcacaagcgcgtcaagaaagatgtcgagttcctcagcaaggagcttgag 276 ||||||||| ||| |||| | ||||| ||| |||||||||||||| | | |||||||||| Sbjct: 81580 gagtacaacctgcgcaagagtgtcaaaaaaaatgtcgagttcctccggagggagcttgag 81639 Query: 277 agcatgcacgctgccctcatcaaggttggcgacgtgccgcgggaccagctcgacaggcag 336 | ||||||| ||| |||||||||||||| ||| ||||||||||| ||||||||||| || Sbjct: 81640 atcatgcacactgtcctcatcaaggttgacgaggtgccgcgggagcagctcgacagtcaa 81699 Query: 337 gtcaagctctgggccggcgaggtcagagagctctcctacgacatggaggatgtcgtcgac 396 || ||| ||||||||| |||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 81700 gttaagatctgggccgacgaggtcagagagctctcctacaacatggaggatgtcatcgac 81759 Query: 397 aagttcctcgtacgtgttgac 417 |||| ||||||||| |||||| Sbjct: 81760 aagtgcctcgtacgggttgac 81780 Score = 69.9 bits (35), Expect = 6e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 79 gcctctggtgctgtgttctgctctgccgtgaagcgccaaaggtttctagct 129 |||||||||||| |||||||||||||| |||||| |||||||| ||||||| Sbjct: 190650 gcctctggtgctttgttctgctctgccctgaagcaccaaaggtatctagct 190600
>emb|AJ302296.1|HVU302296 Hordeum vulgare genomic sequence, clone BAC 80H14, isolate Mla-RGH1bcd Length = 2833 Score = 394 bits (199), Expect = e-107 Identities = 259/279 (92%) Strand = Plus / Plus Query: 154 atggaggtcgtcacggggggcatgggcagcctgctccccaagctgggcctgctgctcatg 213 ||||||||||||||||| | |||||||||||||||||||||||| |||| |||||||||| Sbjct: 1 atggaggtcgtcacgggtgccatgggcagcctgctccccaagcttggccagctgctcatg 60 Query: 214 gatgagtacaacttgcacaagcgcgtcaagaaagatgtcgagttcctcagcaaggagctt 273 |||||||||||| |||||||||||||||||||||| ||| |||||| || ||||||| Sbjct: 61 gatgagtacaacctgcacaagcgcgtcaagaaagacgtccgcttcctctccagggagctt 120 Query: 274 gagagcatgcacgctgccctcatcaaggttggcgacgtgccgcgggaccagctcgacagg 333 ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 121 gagagcatgcacgctgccctcgtcaaggttggcgacgtgccgcgggatcagctcgacaca 180 Query: 334 caggtcaagctctgggccggcgaggtcagagagctctcctacgacatggaggatgtcgtc 393 || || ||||||||||||| |||||||||||| ||||||||||||||||||||||||||| Sbjct: 181 caagttaagctctgggccgacgaggtcagagaactctcctacgacatggaggatgtcgtc 240 Query: 394 gacaagttcctcgtacgtgttgacggcattcatcctcac 432 ||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gacaagttcctcgtacgtgttgacggcattcatcctcac 279
>emb|AJ302297.1|HVU302297 Hordeum vulgare genomic sequence, clone BAC 80H14, isolate Mla-RGH1a Length = 2904 Score = 268 bits (135), Expect = 1e-68 Identities = 228/259 (88%) Strand = Plus / Plus Query: 174 catgggcagcctgctccccaagctgggcctgctgctcatggatgagtacaacttgcacaa 233 |||||| |||||||||||||||||||||| | |||||||||| |||||||| ||||||| Sbjct: 21 catgggaagcctgctccccaagctgggccagttgctcatggaggagtacaagctgcacaa 80 Query: 234 gcgcgtcaagaaagatgtcgagttcctcagcaaggagcttgagagcatgcacgctgccct 293 ||||||||||| |||||||||||||| | ||||||||||||||||||||| ||||||| Sbjct: 81 acgcgtcaagaatgatgtcgagttcctgcggaaggagcttgagagcatgcacactgccct 140 Query: 294 catcaaggttggcgacgtgccgcgggaccagctcgacaggcaggtcaagctctgggccgg 353 ||||||||||| || || |||||| |||||||||||| ||| |||||||||||||||| Sbjct: 141 tatcaaggttggtgaggtaccgcggcaccagctcgacaagcaagtcaagctctgggccga 200 Query: 354 cgaggtcagagagctctcctacgacatggaggatgtcgtcgacaagttcctcgtacgtgt 413 || || ||||| ||||||||| ||||||||||||| || |||||||||||||||||||| Sbjct: 201 tgaagttagagacctctcctacaacatggaggatgtggttgacaagttcctcgtacgtgt 260 Query: 414 tgacggcattcatcctcac 432 || ||| || |||||||| Sbjct: 261 cgatggcgttgatcctcac 279
>emb|AJ302299.1|HVU302299 Hordeum vulgare genomic sequence, clone BAC 711N16, isolate Mla-RGH1f Length = 2853 Score = 208 bits (105), Expect = 1e-50 Identities = 177/201 (88%) Strand = Plus / Plus Query: 217 gagtacaacttgcacaagcgcgtcaagaaagatgtcgagttcctcagcaaggagcttgag 276 ||||||||| ||| |||| | ||||| ||| |||||||||||||| | | |||||||||| Sbjct: 64 gagtacaacctgcgcaagagtgtcaaaaaaaatgtcgagttcctccggagggagcttgag 123 Query: 277 agcatgcacgctgccctcatcaaggttggcgacgtgccgcgggaccagctcgacaggcag 336 | ||||||| ||| |||||||||||||| ||| ||||||||||| ||||||||||| || Sbjct: 124 atcatgcacactgtcctcatcaaggttgacgaggtgccgcgggagcagctcgacagtcaa 183 Query: 337 gtcaagctctgggccggcgaggtcagagagctctcctacgacatggaggatgtcgtcgac 396 || ||| ||||||||| |||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 184 gttaagatctgggccgacgaggtcagagagctctcctacaacatggaggatgtcatcgac 243 Query: 397 aagttcctcgtacgtgttgac 417 |||| ||||||||| |||||| Sbjct: 244 aagtgcctcgtacgggttgac 264
>emb|AJ302298.1|HVU302298 Hordeum vulgare genomic sequence, clone BAC 80H14, isolate Mla-RGH1e Length = 2853 Score = 208 bits (105), Expect = 1e-50 Identities = 177/201 (88%) Strand = Plus / Plus Query: 217 gagtacaacttgcacaagcgcgtcaagaaagatgtcgagttcctcagcaaggagcttgag 276 ||||||||| ||| |||| | ||||| ||| |||||||||||||| | | |||||||||| Sbjct: 64 gagtacaacctgcgcaagagtgtcaaaaaaaatgtcgagttcctccggagggagcttgag 123 Query: 277 agcatgcacgctgccctcatcaaggttggcgacgtgccgcgggaccagctcgacaggcag 336 | ||||||| ||| |||||||||||||| ||| ||||||||||| ||||||||||| || Sbjct: 124 atcatgcacactgtcctcatcaaggttgacgaggtgccgcgggagcagctcgacagtcaa 183 Query: 337 gtcaagctctgggccggcgaggtcagagagctctcctacgacatggaggatgtcgtcgac 396 || ||| ||||||||| |||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 184 gttaagatctgggccgacgaggtcagagagctctcctacaacatggaggatgtcatcgac 243 Query: 397 aagttcctcgtacgtgttgac 417 |||| ||||||||| |||||| Sbjct: 244 aagtgcctcgtacgggttgac 264
>gb|AY266443.1| Hordeum vulgare MLA13-2 (Mla13-2) gene and LINE element Lauren, partial sequence; Copia/Ty1-like retrotransposon HORPIA-4 and Copia/Ty1-like retrotransposon HORPIA-5, complete sequence Length = 18901 Score = 202 bits (102), Expect = 7e-49 Identities = 192/222 (86%) Strand = Plus / Plus Query: 204 gctgctcatggatgagtacaacttgcacaagcgcgtcaagaaagatgtcgagttcctcag 263 |||||||| ||| |||| ||| |||||||| | ||||||||| || | ||| |||| | Sbjct: 2456 gctgctcacggaggagttcaagctgcacaagggtgtcaagaaaaatattgaggacctcgg 2515 Query: 264 caaggagcttgagagcatgcacgctgccctcatcaaggttggcgacgtgccgcgggacca 323 |||||||||||||||||| ||||||||||||||||| |||| || |||||| |||| || Sbjct: 2516 gaaggagcttgagagcatgaacgctgccctcatcaagattggtgaggtgccgagggagca 2575 Query: 324 gctcgacaggcaggtcaagctctgggccggcgaggtcagagagctctcctacgacatgga 383 ||||||||| || | |||||||||||||| |||||||||||||||||||||| ||| || Sbjct: 2576 gctcgacagccaagacaagctctgggccgatgaggtcagagagctctcctacgtcattga 2635 Query: 384 ggatgtcgtcgacaagttcctcgtacgtgttgacggcattca 425 |||||||||||||||||||||||||| ||||| |||||||| Sbjct: 2636 ggatgtcgtcgacaagttcctcgtacaggttgatggcattca 2677 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gctgtgttctgctctgccgtgaag 111 |||||||||||||| ||||||||| Sbjct: 2231 gctgtgttctgctccgccgtgaag 2254
>gb|AY266442.1| Hordeum vulgare LINE element Lauren, partial sequence; MLA6-2 (Mla6-2) gene, complete cds, alternatively spliced; Copia/Ty1-like retrotransposon HORPIA-4 and Copia/Ty1-like retrotransposon HORPIA-5, complete sequence Length = 17053 Score = 202 bits (102), Expect = 7e-49 Identities = 192/222 (86%) Strand = Plus / Plus Query: 204 gctgctcatggatgagtacaacttgcacaagcgcgtcaagaaagatgtcgagttcctcag 263 |||||||| ||| |||| ||| |||||||| | ||||||||| || | ||| |||| | Sbjct: 1205 gctgctcacggaggagttcaagctgcacaagggtgtcaagaaaaatattgaggacctcgg 1264 Query: 264 caaggagcttgagagcatgcacgctgccctcatcaaggttggcgacgtgccgcgggacca 323 |||||||||||||||||| ||||||||||||||||| |||| || |||||| |||| || Sbjct: 1265 gaaggagcttgagagcatgaacgctgccctcatcaagattggtgaggtgccgagggagca 1324 Query: 324 gctcgacaggcaggtcaagctctgggccggcgaggtcagagagctctcctacgacatgga 383 ||||||||| || | |||||||||||||| |||||||||||||||||||||| ||| || Sbjct: 1325 gctcgacagccaagacaagctctgggccgatgaggtcagagagctctcctacgtcattga 1384 Query: 384 ggatgtcgtcgacaagttcctcgtacgtgttgacggcattca 425 |||||||||||||||||||||||||| ||||| |||||||| Sbjct: 1385 ggatgtcgtcgacaagttcctcgtacaggttgatggcattca 1426 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gctgtgttctgctctgccgtgaag 111 |||||||||||||| ||||||||| Sbjct: 980 gctgtgttctgctccgccgtgaag 1003
>gb|AY009939.1| Hordeum vulgare Mla1 (Mla1) mRNA, complete cds Length = 3380 Score = 194 bits (98), Expect = 2e-46 Identities = 191/222 (86%) Strand = Plus / Plus Query: 204 gctgctcatggatgagtacaacttgcacaagcgcgtcaagaaagatgtcgagttcctcag 263 |||||||| ||| |||| ||| |||||||| | ||||||||| || | ||| |||| | Sbjct: 280 gctgctcacggaggagttcaagctgcacaagggtgtcaagaaaaatattgaggacctcgg 339 Query: 264 caaggagcttgagagcatgcacgctgccctcatcaaggttggcgacgtgccgcgggacca 323 |||||||||||||||||| ||||||||||||||||| |||| || |||||| |||| || Sbjct: 340 gaaggagcttgagagcatgaacgctgccctcatcaagattggtgaggtgccgagggagca 399 Query: 324 gctcgacaggcaggtcaagctctgggccggcgaggtcagagagctctcctacgacatgga 383 ||||||||| || | |||||||||||||| || ||||||||||||||||||| ||| || Sbjct: 400 gctcgacagccaagacaagctctgggccgatgaagtcagagagctctcctacgtcattga 459 Query: 384 ggatgtcgtcgacaagttcctcgtacgtgttgacggcattca 425 |||||||||||||||||||||||||| ||||| |||||||| Sbjct: 460 ggatgtcgtcgacaagttcctcgtacaggttgatggcattca 501 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gctgtgttctgctctgccgtgaag 111 |||||||||||||| ||||||||| Sbjct: 157 gctgtgttctgctccgccgtgaag 180
>gb|AY009938.2| Hordeum vulgare subsp. vulgare MLA1-2 (Mla1-2) gene, partial cds; and MLA1 (Mla1) gene, complete cds Length = 18958 Score = 194 bits (98), Expect = 2e-46 Identities = 191/222 (86%) Strand = Plus / Plus Query: 204 gctgctcatggatgagtacaacttgcacaagcgcgtcaagaaagatgtcgagttcctcag 263 |||||||| ||| |||| ||| |||||||| | ||||||||| || | ||| |||| | Sbjct: 10269 gctgctcacggaggagttcaagctgcacaagggtgtcaagaaaaatattgaggacctcgg 10328 Query: 264 caaggagcttgagagcatgcacgctgccctcatcaaggttggcgacgtgccgcgggacca 323 |||||||||||||||||| ||||||||||||||||| |||| || |||||| |||| || Sbjct: 10329 gaaggagcttgagagcatgaacgctgccctcatcaagattggtgaggtgccgagggagca 10388 Query: 324 gctcgacaggcaggtcaagctctgggccggcgaggtcagagagctctcctacgacatgga 383 ||||||||| || | |||||||||||||| || ||||||||||||||||||| ||| || Sbjct: 10389 gctcgacagccaagacaagctctgggccgatgaagtcagagagctctcctacgtcattga 10448 Query: 384 ggatgtcgtcgacaagttcctcgtacgtgttgacggcattca 425 |||||||||||||||||||||||||| ||||| |||||||| Sbjct: 10449 ggatgtcgtcgacaagttcctcgtacaggttgatggcattca 10490 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gctgtgttctgctctgccgtgaag 111 |||||||||||||| ||||||||| Sbjct: 10044 gctgtgttctgctccgccgtgaag 10067
>emb|AJ302293.1|HVU302293 Hordeum vulgare Mla6 gene, exons 1-5 Length = 8074 Score = 194 bits (98), Expect = 2e-46 Identities = 191/222 (86%) Strand = Plus / Plus Query: 204 gctgctcatggatgagtacaacttgcacaagcgcgtcaagaaagatgtcgagttcctcag 263 |||||||| ||| |||| ||| |||||||| | ||||||||| || | ||| |||| | Sbjct: 1755 gctgctcacggaggagttcaagctgcacaagggtgtcaagaaaaatattgaggacctcgg 1814 Query: 264 caaggagcttgagagcatgcacgctgccctcatcaaggttggcgacgtgccgcgggacca 323 |||||||||||||||||| ||||||||||||||||| |||| || |||||| |||| || Sbjct: 1815 gaaggagcttgagagcatgaacgctgccctcatcaagattggtgaggtgccgagggagca 1874 Query: 324 gctcgacaggcaggtcaagctctgggccggcgaggtcagagagctctcctacgacatgga 383 ||||||||| || | |||||||||||||| |||||||||||||||||||||| ||| || Sbjct: 1875 gctcgacagccaagacaagctctgggccgatgaggtcagagagctctcctacgtcattga 1934 Query: 384 ggatgtcgtcgacaagttcctcgtacgtgttgacggcattca 425 ||||||||||||||| |||||||||| ||||| |||||||| Sbjct: 1935 ggatgtcgtcgacaaattcctcgtacaggttgatggcattca 1976 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gctgtgttctgctctgccgtgaag 111 |||||||||||||| ||||||||| Sbjct: 1529 gctgtgttctgctccgccgtgaag 1552
>emb|AJ302292.1|HVU302292 Hordeum vulgare mRNA for MLA6 protein Length = 2871 Score = 194 bits (98), Expect = 2e-46 Identities = 191/222 (86%) Strand = Plus / Plus Query: 204 gctgctcatggatgagtacaacttgcacaagcgcgtcaagaaagatgtcgagttcctcag 263 |||||||| ||| |||| ||| |||||||| | ||||||||| || | ||| |||| | Sbjct: 51 gctgctcacggaggagttcaagctgcacaagggtgtcaagaaaaatattgaggacctcgg 110 Query: 264 caaggagcttgagagcatgcacgctgccctcatcaaggttggcgacgtgccgcgggacca 323 |||||||||||||||||| ||||||||||||||||| |||| || |||||| |||| || Sbjct: 111 gaaggagcttgagagcatgaacgctgccctcatcaagattggtgaggtgccgagggagca 170 Query: 324 gctcgacaggcaggtcaagctctgggccggcgaggtcagagagctctcctacgacatgga 383 ||||||||| || | |||||||||||||| |||||||||||||||||||||| ||| || Sbjct: 171 gctcgacagccaagacaagctctgggccgatgaggtcagagagctctcctacgtcattga 230 Query: 384 ggatgtcgtcgacaagttcctcgtacgtgttgacggcattca 425 ||||||||||||||| |||||||||| ||||| |||||||| Sbjct: 231 ggatgtcgtcgacaaattcctcgtacaggttgatggcattca 272
>gb|AY266444.1| Hordeum vulgare MLA7 (Mla7) mRNA, complete cds Length = 3761 Score = 192 bits (97), Expect = 7e-46 Identities = 172/197 (87%) Strand = Plus / Plus Query: 227 tgcacaagcgcgtcaagaaagatgtcgagttcctcagcaaggagcttgagagcatgcacg 286 |||||||| | ||||||||| || | ||| |||| | |||||||||||||||||| ||| Sbjct: 487 tgcacaagggtgtcaagaaaaatattgaggacctcgggaaggagcttgagagcatgaacg 546 Query: 287 ctgccctcatcaaggttggcgacgtgccgcgggaccagctcgacaggcaggtcaagctct 346 |||||||||||||| |||| || |||||| |||| ||||||||||| || | |||||||| Sbjct: 547 ctgccctcatcaagattggtgaggtgccgagggagcagctcgacagccaagacaagctct 606 Query: 347 gggccggcgaggtcagagagctctcctacgacatggaggatgtcgtcgacaagttcctcg 406 |||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 607 gggccgatgaggtcagagagctctcctacgtcattgaggatgtcgtcgacaagttcctcg 666 Query: 407 tacgtgttgacggcatt 423 ||| ||||| |||||| Sbjct: 667 tacaggttgatggcatt 683 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gctgtgttctgctctgccgtgaag 111 |||||||||||||| ||||||||| Sbjct: 239 gctgtgttctgctccgccgtgaag 262
>gb|AY196347.1| Hordeum vulgare subsp. vulgare MLA12 (Mla12) gene, complete cds Length = 6604 Score = 192 bits (97), Expect = 7e-46 Identities = 172/197 (87%) Strand = Plus / Plus Query: 227 tgcacaagcgcgtcaagaaagatgtcgagttcctcagcaaggagcttgagagcatgcacg 286 |||||||| | ||||||||| || | ||| |||| | |||||||||||||||||| ||| Sbjct: 855 tgcacaagggtgtcaagaaaaatattgaggacctcgggaaggagcttgagagcatgaacg 914 Query: 287 ctgccctcatcaaggttggcgacgtgccgcgggaccagctcgacaggcaggtcaagctct 346 |||||||||||||| |||| || |||||| |||| ||||||||||| || | |||||||| Sbjct: 915 ctgccctcatcaagattggtgaggtgccgagggagcagctcgacagccaagacaagctct 974 Query: 347 gggccggcgaggtcagagagctctcctacgacatggaggatgtcgtcgacaagttcctcg 406 |||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 975 gggccgatgaggtcagagagctctcctacgtcattgaggatgtcgtcgacaagttcctcg 1034 Query: 407 tacgtgttgacggcatt 423 ||| ||||| |||||| Sbjct: 1035 tacaggttgatggcatt 1051 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gctgtgttctgctctgccgtgaag 111 |||||||||||||| ||||||||| Sbjct: 595 gctgtgttctgctccgccgtgaag 618
>gb|AF523683.1| Hordeum vulgare CC-NBS-LRR resistance protein MLA13 mRNA, complete cds; alternatively spliced Length = 3617 Score = 192 bits (97), Expect = 7e-46 Identities = 172/197 (87%) Strand = Plus / Plus Query: 227 tgcacaagcgcgtcaagaaagatgtcgagttcctcagcaaggagcttgagagcatgcacg 286 |||||||| | ||||||||| || | ||| |||| | |||||||||||||||||| ||| Sbjct: 385 tgcacaagggtgtcaagaaaaatattgaggacctcgggaaggagcttgagagcatgaacg 444 Query: 287 ctgccctcatcaaggttggcgacgtgccgcgggaccagctcgacaggcaggtcaagctct 346 |||||||||||||| |||| || |||||| |||| ||||||||||| || | |||||||| Sbjct: 445 ctgccctcatcaagattggtgaggtgccgagggagcagctcgacagccaagacaagctct 504 Query: 347 gggccggcgaggtcagagagctctcctacgacatggaggatgtcgtcgacaagttcctcg 406 |||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 505 gggccgatgaggtcagagagctctcctacgtcattgaggatgtcgtcgacaagttcctcg 564 Query: 407 tacgtgttgacggcatt 423 ||| ||||| |||||| Sbjct: 565 tacaggttgatggcatt 581 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gctgtgttctgctctgccgtgaag 111 |||||||||||||| ||||||||| Sbjct: 239 gctgtgttctgctccgccgtgaag 262
>gb|AF523682.1| Hordeum vulgare CC-NBS-LRR resistance protein MLA13 mRNA, complete cds; alternatively spliced Length = 3719 Score = 192 bits (97), Expect = 7e-46 Identities = 172/197 (87%) Strand = Plus / Plus Query: 227 tgcacaagcgcgtcaagaaagatgtcgagttcctcagcaaggagcttgagagcatgcacg 286 |||||||| | ||||||||| || | ||| |||| | |||||||||||||||||| ||| Sbjct: 487 tgcacaagggtgtcaagaaaaatattgaggacctcgggaaggagcttgagagcatgaacg 546 Query: 287 ctgccctcatcaaggttggcgacgtgccgcgggaccagctcgacaggcaggtcaagctct 346 |||||||||||||| |||| || |||||| |||| ||||||||||| || | |||||||| Sbjct: 547 ctgccctcatcaagattggtgaggtgccgagggagcagctcgacagccaagacaagctct 606 Query: 347 gggccggcgaggtcagagagctctcctacgacatggaggatgtcgtcgacaagttcctcg 406 |||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 607 gggccgatgaggtcagagagctctcctacgtcattgaggatgtcgtcgacaagttcctcg 666 Query: 407 tacgtgttgacggcatt 423 ||| ||||| |||||| Sbjct: 667 tacaggttgatggcatt 683 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gctgtgttctgctctgccgtgaag 111 |||||||||||||| ||||||||| Sbjct: 239 gctgtgttctgctccgccgtgaag 262
>gb|AF523681.1| Hordeum vulgare CC-NBS-LRR resistance protein MLA13 mRNA, complete cds; alternatively spliced Length = 3716 Score = 192 bits (97), Expect = 7e-46 Identities = 172/197 (87%) Strand = Plus / Plus Query: 227 tgcacaagcgcgtcaagaaagatgtcgagttcctcagcaaggagcttgagagcatgcacg 286 |||||||| | ||||||||| || | ||| |||| | |||||||||||||||||| ||| Sbjct: 484 tgcacaagggtgtcaagaaaaatattgaggacctcgggaaggagcttgagagcatgaacg 543 Query: 287 ctgccctcatcaaggttggcgacgtgccgcgggaccagctcgacaggcaggtcaagctct 346 |||||||||||||| |||| || |||||| |||| ||||||||||| || | |||||||| Sbjct: 544 ctgccctcatcaagattggtgaggtgccgagggagcagctcgacagccaagacaagctct 603 Query: 347 gggccggcgaggtcagagagctctcctacgacatggaggatgtcgtcgacaagttcctcg 406 |||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 604 gggccgatgaggtcagagagctctcctacgtcattgaggatgtcgtcgacaagttcctcg 663 Query: 407 tacgtgttgacggcatt 423 ||| ||||| |||||| Sbjct: 664 tacaggttgatggcatt 680 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gctgtgttctgctctgccgtgaag 111 |||||||||||||| ||||||||| Sbjct: 236 gctgtgttctgctccgccgtgaag 259
>gb|AF523680.1| Hordeum vulgare CC-NBS-LRR resistance protein MLA13 mRNA, complete cds; alternatively spliced Length = 3614 Score = 192 bits (97), Expect = 7e-46 Identities = 172/197 (87%) Strand = Plus / Plus Query: 227 tgcacaagcgcgtcaagaaagatgtcgagttcctcagcaaggagcttgagagcatgcacg 286 |||||||| | ||||||||| || | ||| |||| | |||||||||||||||||| ||| Sbjct: 382 tgcacaagggtgtcaagaaaaatattgaggacctcgggaaggagcttgagagcatgaacg 441 Query: 287 ctgccctcatcaaggttggcgacgtgccgcgggaccagctcgacaggcaggtcaagctct 346 |||||||||||||| |||| || |||||| |||| ||||||||||| || | |||||||| Sbjct: 442 ctgccctcatcaagattggtgaggtgccgagggagcagctcgacagccaagacaagctct 501 Query: 347 gggccggcgaggtcagagagctctcctacgacatggaggatgtcgtcgacaagttcctcg 406 |||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 502 gggccgatgaggtcagagagctctcctacgtcattgaggatgtcgtcgacaagttcctcg 561 Query: 407 tacgtgttgacggcatt 423 ||| ||||| |||||| Sbjct: 562 tacaggttgatggcatt 578 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gctgtgttctgctctgccgtgaag 111 |||||||||||||| ||||||||| Sbjct: 236 gctgtgttctgctccgccgtgaag 259
>gb|AF523679.1| Hordeum vulgare CC-NBS-LRR resistance protein MLA13 mRNA, complete cds; alternatively spliced Length = 3727 Score = 192 bits (97), Expect = 7e-46 Identities = 172/197 (87%) Strand = Plus / Plus Query: 227 tgcacaagcgcgtcaagaaagatgtcgagttcctcagcaaggagcttgagagcatgcacg 286 |||||||| | ||||||||| || | ||| |||| | |||||||||||||||||| ||| Sbjct: 495 tgcacaagggtgtcaagaaaaatattgaggacctcgggaaggagcttgagagcatgaacg 554 Query: 287 ctgccctcatcaaggttggcgacgtgccgcgggaccagctcgacaggcaggtcaagctct 346 |||||||||||||| |||| || |||||| |||| ||||||||||| || | |||||||| Sbjct: 555 ctgccctcatcaagattggtgaggtgccgagggagcagctcgacagccaagacaagctct 614 Query: 347 gggccggcgaggtcagagagctctcctacgacatggaggatgtcgtcgacaagttcctcg 406 |||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 615 gggccgatgaggtcagagagctctcctacgtcattgaggatgtcgtcgacaagttcctcg 674 Query: 407 tacgtgttgacggcatt 423 ||| ||||| |||||| Sbjct: 675 tacaggttgatggcatt 691 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gctgtgttctgctctgccgtgaag 111 |||||||||||||| ||||||||| Sbjct: 349 gctgtgttctgctccgccgtgaag 372
>gb|AF523678.1| Hordeum vulgare CC-NBS-LRR resistance protein MLA13 gene, complete cds; alternatively spliced Length = 13525 Score = 192 bits (97), Expect = 7e-46 Identities = 172/197 (87%) Strand = Plus / Plus Query: 227 tgcacaagcgcgtcaagaaagatgtcgagttcctcagcaaggagcttgagagcatgcacg 286 |||||||| | ||||||||| || | ||| |||| | |||||||||||||||||| ||| Sbjct: 2264 tgcacaagggtgtcaagaaaaatattgaggacctcgggaaggagcttgagagcatgaacg 2323 Query: 287 ctgccctcatcaaggttggcgacgtgccgcgggaccagctcgacaggcaggtcaagctct 346 |||||||||||||| |||| || |||||| |||| ||||||||||| || | |||||||| Sbjct: 2324 ctgccctcatcaagattggtgaggtgccgagggagcagctcgacagccaagacaagctct 2383 Query: 347 gggccggcgaggtcagagagctctcctacgacatggaggatgtcgtcgacaagttcctcg 406 |||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 2384 gggccgatgaggtcagagagctctcctacgtcattgaggatgtcgtcgacaagttcctcg 2443 Query: 407 tacgtgttgacggcatt 423 ||| ||||| |||||| Sbjct: 2444 tacaggttgatggcatt 2460 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gctgtgttctgctctgccgtgaag 111 |||||||||||||| ||||||||| Sbjct: 2016 gctgtgttctgctccgccgtgaag 2039
>emb|AJ302295.1|HVU302295 Hordeum vulgare mRNA for MLA6-2 protein, class C alternative splice variant (Mla6-2 gene) Length = 1064 Score = 188 bits (95), Expect = 1e-44 Identities = 192/223 (86%), Gaps = 1/223 (0%) Strand = Plus / Plus Query: 204 gctgctcatggatgagtacaacttgcacaagcgcgtcaagaaagatgtcgagttcctcag 263 |||||||| ||| |||| ||| |||||||| | ||||||||| || | ||| |||| | Sbjct: 381 gctgctcacggaggagttcaagctgcacaagggtgtcaagaaaaatattgaggacctcgg 440 Query: 264 caaggagcttgagagcatgcacgctgccctcatcaaggttggcgacgtgccgcgggacca 323 |||||||||||||||||| ||||||||||||||||| |||| || |||||| |||| || Sbjct: 441 gaaggagcttgagagcatgaacgctgccctcatcaagattggtgaggtgccgagggagca 500 Query: 324 gctcgacaggcaggtcaagctctgggccggcgaggtcagagagctctcctacgacatgga 383 ||||||||| || | |||||||||||||| |||||||||||||||||||||| ||| || Sbjct: 501 gctcgacagccaagacaagctctgggccgatgaggtcagagagctctcctacgtcattga 560 Query: 384 ggatgtcgtcgacaagttcc-tcgtacgtgttgacggcattca 425 |||||||||||||||||||| |||||| ||||| |||||||| Sbjct: 561 ggatgtcgtcgacaagttccttcgtacaggttgatggcattca 603 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gctgtgttctgctctgccgtgaag 111 |||||||||||||| ||||||||| Sbjct: 156 gctgtgttctgctccgccgtgaag 179
>emb|AJ302294.1|HVU302294 Hordeum vulgare mRNA for MLA6-2 protein, class B alternative splice variant (Mla6-2 gene) Length = 1077 Score = 188 bits (95), Expect = 1e-44 Identities = 192/223 (86%), Gaps = 1/223 (0%) Strand = Plus / Plus Query: 204 gctgctcatggatgagtacaacttgcacaagcgcgtcaagaaagatgtcgagttcctcag 263 |||||||| ||| |||| ||| |||||||| | ||||||||| || | ||| |||| | Sbjct: 394 gctgctcacggaggagttcaagctgcacaagggtgtcaagaaaaatattgaggacctcgg 453 Query: 264 caaggagcttgagagcatgcacgctgccctcatcaaggttggcgacgtgccgcgggacca 323 |||||||||||||||||| ||||||||||||||||| |||| || |||||| |||| || Sbjct: 454 gaaggagcttgagagcatgaacgctgccctcatcaagattggtgaggtgccgagggagca 513 Query: 324 gctcgacaggcaggtcaagctctgggccggcgaggtcagagagctctcctacgacatgga 383 ||||||||| || | |||||||||||||| |||||||||||||||||||||| ||| || Sbjct: 514 gctcgacagccaagacaagctctgggccgatgaggtcagagagctctcctacgtcattga 573 Query: 384 ggatgtcgtcgacaagttcc-tcgtacgtgttgacggcattca 425 |||||||||||||||||||| |||||| ||||| |||||||| Sbjct: 574 ggatgtcgtcgacaagttccttcgtacaggttgatggcattca 616 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gctgtgttctgctctgccgtgaag 111 |||||||||||||| ||||||||| Sbjct: 266 gctgtgttctgctccgccgtgaag 289
>gb|AY266445.1| Hordeum vulgare MLA10 (Mla10) mRNA, complete cds Length = 3611 Score = 184 bits (93), Expect = 2e-43 Identities = 171/197 (86%) Strand = Plus / Plus Query: 227 tgcacaagcgcgtcaagaaagatgtcgagttcctcagcaaggagcttgagagcatgcacg 286 |||||||| | ||||||||| || | ||| |||| | ||||||||||| |||||| ||| Sbjct: 487 tgcacaagggtgtcaagaaaaatattgaggacctcgggaaggagcttgatagcatgaacg 546 Query: 287 ctgccctcatcaaggttggcgacgtgccgcgggaccagctcgacaggcaggtcaagctct 346 |||||||||||||| |||| || |||||| |||| ||||||||||| || | |||||||| Sbjct: 547 ctgccctcatcaagattggtgaggtgccgagggagcagctcgacagccaagacaagctct 606 Query: 347 gggccggcgaggtcagagagctctcctacgacatggaggatgtcgtcgacaagttcctcg 406 |||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 607 gggccgatgaggtcagagagctctcctacgtcattgaggatgtcgtcgacaagttcctcg 666 Query: 407 tacgtgttgacggcatt 423 ||| ||||| |||||| Sbjct: 667 tacaggttgatggcatt 683 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gctgtgttctgctctgccgtgaag 111 |||||||||||||| ||||||||| Sbjct: 239 gctgtgttctgctccgccgtgaag 262
>gb|AY222610.1| Triticum aestivum mla-like protein mRNA, complete cds Length = 2813 Score = 107 bits (54), Expect = 3e-20 Identities = 135/162 (83%) Strand = Plus / Plus Query: 264 caaggagcttgagagcatgcacgctgccctcatcaaggttggcgacgtgccgcgggacca 323 ||||||||||||||||||| || |||||||||||| | || || |||||| || || Sbjct: 111 caaggagcttgagagcatgaaccaagccctcatcaagataggtgaggtgccggatgagca 170 Query: 324 gctcgacaggcaggtcaagctctgggccggcgaggtcagagagctctcctacgacatgga 383 ||||||| || | |||||||||||||| ||||||||||||||||||||| ||| || Sbjct: 171 gctcgacgaccaagacaagctctgggccgatgaggtcagagagctctcctacatcattga 230 Query: 384 ggatgtcgtcgacaagttcctcgtacgtgttgacggcattca 425 ||||||||||||||| ||||||||| ||||| |||||||| Sbjct: 231 ggatgtcgtcgacaaattcctcgtagacgttgatggcattca 272
>gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0035B18, complete sequence Length = 123425 Score = 101 bits (51), Expect = 2e-18 Identities = 111/131 (84%) Strand = Plus / Minus Query: 266 aggagcttgagagcatgcacgctgccctcatcaaggttggcgacgtgccgcgggaccagc 325 ||||||| ||||||||| | |||| |||| ||||||| || || ||||| | ||||||| Sbjct: 40504 aggagctggagagcatgaatgctgtcctcctcaaggtcggtgaggtgcctccagaccagc 40445 Query: 326 tcgacaggcaggtcaagctctgggccggcgaggtcagagagctctcctacgacatggagg 385 ||||| || ||||||||||||||| || || ||||| ||||| |||||||||||||||| Sbjct: 40444 tcgacgagctggtcaagctctgggcaggggatgtcagggagctgtcctacgacatggagg 40385 Query: 386 atgtcgtcgac 396 | ||||||||| Sbjct: 40384 acgtcgtcgac 40374
>gb|AF497779.1| Triticum aestivm Mla-like gene, partial sequence Length = 571 Score = 101 bits (51), Expect = 2e-18 Identities = 69/75 (92%) Strand = Plus / Minus Query: 339 caagctctgggccggcgaggtcagagagctctcctacgacatggaggatgtcgtcgacaa 398 |||||| |||||| |||||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 250 caagctatgggcccacgaggtcagagagctctcctacaacatggaggacgtcgtcgacaa 191 Query: 399 gttcctcgtacgtgt 413 ||||||| ||||||| Sbjct: 190 gttcctcatacgtgt 176
>gb|AF499035.1| Triticum aestivum MLA6-like protein mRNA, partial sequence Length = 571 Score = 101 bits (51), Expect = 2e-18 Identities = 69/75 (92%) Strand = Plus / Plus Query: 339 caagctctgggccggcgaggtcagagagctctcctacgacatggaggatgtcgtcgacaa 398 |||||| |||||| |||||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 322 caagctatgggcccacgaggtcagagagctctcctacaacatggaggacgtcgtcgacaa 381 Query: 399 gttcctcgtacgtgt 413 ||||||| ||||||| Sbjct: 382 gttcctcatacgtgt 396
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 101 bits (51), Expect = 2e-18 Identities = 111/131 (84%) Strand = Plus / Minus Query: 266 aggagcttgagagcatgcacgctgccctcatcaaggttggcgacgtgccgcgggaccagc 325 ||||||| ||||||||| | |||| |||| ||||||| || || ||||| | ||||||| Sbjct: 1421709 aggagctggagagcatgaatgctgtcctcctcaaggtcggtgaggtgcctccagaccagc 1421650 Query: 326 tcgacaggcaggtcaagctctgggccggcgaggtcagagagctctcctacgacatggagg 385 ||||| || ||||||||||||||| || || ||||| ||||| |||||||||||||||| Sbjct: 1421649 tcgacgagctggtcaagctctgggcaggggatgtcagggagctgtcctacgacatggagg 1421590 Query: 386 atgtcgtcgac 396 | ||||||||| Sbjct: 1421589 acgtcgtcgac 1421579 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 337 gtcaagctctgggccggcgaggtcagagagctctcctacgacatggagga 386 ||||||||||||| | || ||||||||||||||||||||||| ||||| Sbjct: 19631344 gtcaagctctgggtgagagacgtcagagagctctcctacgacatcgagga 19631393 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Minus Query: 319 gaccagctcgacaggcaggtcaagctctgggc 350 |||||||||||| ||||||||| ||||||||| Sbjct: 18363269 gaccagctcgacgggcaggtcaggctctgggc 18363238 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Minus Query: 319 gaccagctcgacaggcaggtcaagctctgggc 350 |||||||||||| ||||||||| ||||||||| Sbjct: 18333169 gaccagctcgacgggcaggtcaggctctgggc 18333138 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 362 gagagctctcctacgacatggaggat 387 ||||||||||||||||||| |||||| Sbjct: 8698794 gagagctctcctacgacatcgaggat 8698819
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 101 bits (51), Expect = 2e-18 Identities = 111/131 (84%) Strand = Plus / Minus Query: 266 aggagcttgagagcatgcacgctgccctcatcaaggttggcgacgtgccgcgggaccagc 325 ||||||| ||||||||| | |||| |||| ||||||| || || ||||| | ||||||| Sbjct: 1419430 aggagctggagagcatgaatgctgtcctcctcaaggtcggtgaggtgcctccagaccagc 1419371 Query: 326 tcgacaggcaggtcaagctctgggccggcgaggtcagagagctctcctacgacatggagg 385 ||||| || ||||||||||||||| || || ||||| ||||| |||||||||||||||| Sbjct: 1419370 tcgacgagctggtcaagctctgggcaggggatgtcagggagctgtcctacgacatggagg 1419311 Query: 386 atgtcgtcgac 396 | ||||||||| Sbjct: 1419310 acgtcgtcgac 1419300 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 337 gtcaagctctgggccggcgaggtcagagagctctcctacgacatggagga 386 ||||||||||||| | || ||||||||||||||||||||||| ||||| Sbjct: 19917203 gtcaagctctgggtgagagacgtcagagagctctcctacgacatcgagga 19917252 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Minus Query: 319 gaccagctcgacaggcaggtcaagctctgggc 350 |||||||||||| ||||||||| ||||||||| Sbjct: 18522670 gaccagctcgacgggcaggtcaggctctgggc 18522639 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Minus Query: 319 gaccagctcgacaggcaggtcaagctctgggc 350 |||||||||||| ||||||||| ||||||||| Sbjct: 18492570 gaccagctcgacgggcaggtcaggctctgggc 18492539 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 362 gagagctctcctacgacatggaggat 387 ||||||||||||||||||| |||||| Sbjct: 8769557 gagagctctcctacgacatcgaggat 8769582
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 85.7 bits (43), Expect = 1e-13 Identities = 94/111 (84%) Strand = Plus / Minus Query: 268 gagcttgagagcatgcacgctgccctcatcaaggttggcgacgtgccgcgggaccagctc 327 ||||| ||||||||||| || |||||| |||||| ||||||||||| ||||||||| Sbjct: 11502315 gagctggagagcatgcaggccgccctccgcaaggtcggcgacgtgccctccgaccagctc 11502256 Query: 328 gacaggcaggtcaagctctgggccggcgaggtcagagagctctcctacgac 378 ||| ||||||| |||||||||| |||| ||||| ||||||||||||||| Sbjct: 11502255 gacgagcaggtcgagctctgggcgcgcgacgtcagggagctctcctacgac 11502205 Score = 65.9 bits (33), Expect = 1e-07 Identities = 87/105 (82%) Strand = Plus / Minus Query: 274 gagagcatgcacgctgccctcatcaaggttggcgacgtgccgcgggaccagctcgacagg 333 |||||||||| || |||||| |||||| |||||| |||| |||||||||||| | Sbjct: 11511423 gagagcatgccggccgccctccgcaaggtcggcgacatgccctccgaccagctcgacgag 11511364 Query: 334 caggtcaagctctgggccggcgaggtcagagagctctcctacgac 378 ||||||||||| ||||| |||| ||||| ||||||||||||||| Sbjct: 11511363 caggtcaagctttgggcgcgcgacgtcagggagctctcctacgac 11511319 Score = 40.1 bits (20), Expect = 5.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 175 atgggcagcctgctccccaagctgggcctgctgctcatggatgagtacaacttgca 230 ||||| ||||||||||| ||| ||| | |||||||| ||| ||||||||| |||| Sbjct: 3751665 atggggagcctgctcccaaagatggttcagctgctcaaggaggagtacaacctgca 3751610
>dbj|AP005836.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0013F08 Length = 166989 Score = 85.7 bits (43), Expect = 1e-13 Identities = 94/111 (84%) Strand = Plus / Minus Query: 268 gagcttgagagcatgcacgctgccctcatcaaggttggcgacgtgccgcgggaccagctc 327 ||||| ||||||||||| || |||||| |||||| ||||||||||| ||||||||| Sbjct: 18322 gagctggagagcatgcaggccgccctccgcaaggtcggcgacgtgccctccgaccagctc 18263 Query: 328 gacaggcaggtcaagctctgggccggcgaggtcagagagctctcctacgac 378 ||| ||||||| |||||||||| |||| ||||| ||||||||||||||| Sbjct: 18262 gacgagcaggtcgagctctgggcgcgcgacgtcagggagctctcctacgac 18212 Score = 65.9 bits (33), Expect = 1e-07 Identities = 87/105 (82%) Strand = Plus / Minus Query: 274 gagagcatgcacgctgccctcatcaaggttggcgacgtgccgcgggaccagctcgacagg 333 |||||||||| || |||||| |||||| |||||| |||| |||||||||||| | Sbjct: 27430 gagagcatgccggccgccctccgcaaggtcggcgacatgccctccgaccagctcgacgag 27371 Query: 334 caggtcaagctctgggccggcgaggtcagagagctctcctacgac 378 ||||||||||| ||||| |||| ||||| ||||||||||||||| Sbjct: 27370 caggtcaagctttgggcgcgcgacgtcagggagctctcctacgac 27326
>dbj|AP006526.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0591A03 Length = 147043 Score = 85.7 bits (43), Expect = 1e-13 Identities = 94/111 (84%) Strand = Plus / Minus Query: 268 gagcttgagagcatgcacgctgccctcatcaaggttggcgacgtgccgcgggaccagctc 327 ||||| ||||||||||| || |||||| |||||| ||||||||||| ||||||||| Sbjct: 136003 gagctggagagcatgcaggccgccctccgcaaggtcggcgacgtgccctccgaccagctc 135944 Query: 328 gacaggcaggtcaagctctgggccggcgaggtcagagagctctcctacgac 378 ||| ||||||| |||||||||| |||| ||||| ||||||||||||||| Sbjct: 135943 gacgagcaggtcgagctctgggcgcgcgacgtcagggagctctcctacgac 135893 Score = 65.9 bits (33), Expect = 1e-07 Identities = 87/105 (82%) Strand = Plus / Minus Query: 274 gagagcatgcacgctgccctcatcaaggttggcgacgtgccgcgggaccagctcgacagg 333 |||||||||| || |||||| |||||| |||||| |||| |||||||||||| | Sbjct: 145111 gagagcatgccggccgccctccgcaaggtcggcgacatgccctccgaccagctcgacgag 145052 Query: 334 caggtcaagctctgggccggcgaggtcagagagctctcctacgac 378 ||||||||||| ||||| |||| ||||| ||||||||||||||| Sbjct: 145051 caggtcaagctttgggcgcgcgacgtcagggagctctcctacgac 145007
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 336 ggtcaagctctgggccggcgaggtcagagagctctcctacgacatggagga 386 ||||||||||||||| | || ||||| ||||| ||||||||||||||||| Sbjct: 4105706 ggtcaagctctgggcacgtgatgtcagggagctgtcctacgacatggagga 4105756 Score = 48.1 bits (24), Expect = 0.024 Identities = 63/76 (82%) Strand = Plus / Plus Query: 322 cagctcgacaggcaggtcaagctctgggccggcgaggtcagagagctctcctacgacatg 381 ||||||||| || ||||||||||||||| | || || || ||||| ||||| |||||| Sbjct: 4099889 cagctcgacgagctggtcaagctctgggcacgtgatgtgagggagctgtcctatgacatg 4099948 Query: 382 gaggatgtcgtcgaca 397 ||||| ||||||||| Sbjct: 4099949 gaggacatcgtcgaca 4099964 Score = 44.1 bits (22), Expect = 0.37 Identities = 49/58 (84%) Strand = Plus / Minus Query: 340 aagctctgggccggcgaggtcagagagctctcctacgacatggaggatgtcgtcgaca 397 ||||||||||| |||| ||| | ||||| ||||| ||||||||||| ||||||||| Sbjct: 4145385 aagctctgggcacgcgatgtccgggagctgtcctatgacatggaggacatcgtcgaca 4145328 Score = 44.1 bits (22), Expect = 0.37 Identities = 49/58 (84%) Strand = Plus / Minus Query: 175 atgggcagcctgctccccaagctgggcctgctgctcatggatgagtacaacttgcaca 232 ||||| || |||||||||||||| |||| | |||||| ||| |||||| || |||||| Sbjct: 4122393 atgggtaggctgctccccaagctcggccagatgctcaaggacgagtacgacctgcaca 4122336 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 175 atgggcagcctgctccccaagctggg 200 |||||||| ||||||||||||||||| Sbjct: 4105545 atgggcagtctgctccccaagctggg 4105570 Score = 42.1 bits (21), Expect = 1.5 Identities = 42/49 (85%) Strand = Plus / Plus Query: 153 catggaggtcgtcacggggggcatgggcagcctgctccccaagctgggc 201 ||||||| ||||||| |||| ||| | |||||| |||||||||||||| Sbjct: 2872608 catggagttcgtcactggggcgatgagtagcctgatccccaagctgggc 2872656 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 176 tgggcagcctgctccccaagctgggcctgctgctca 211 ||||||| ||||||||||||||||| |||||||| Sbjct: 4099743 tgggcagtttgctccccaagctgggcgagctgctca 4099778
>dbj|AP005606.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1590_E05 Length = 148205 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 336 ggtcaagctctgggccggcgaggtcagagagctctcctacgacatggagga 386 ||||||||||||||| | || ||||| ||||| ||||||||||||||||| Sbjct: 5329 ggtcaagctctgggcacgtgatgtcagggagctgtcctacgacatggagga 5379 Score = 44.1 bits (22), Expect = 0.37 Identities = 49/58 (84%) Strand = Plus / Minus Query: 340 aagctctgggccggcgaggtcagagagctctcctacgacatggaggatgtcgtcgaca 397 ||||||||||| |||| ||| | ||||| ||||| ||||||||||| ||||||||| Sbjct: 45008 aagctctgggcacgcgatgtccgggagctgtcctatgacatggaggacatcgtcgaca 44951 Score = 44.1 bits (22), Expect = 0.37 Identities = 49/58 (84%) Strand = Plus / Minus Query: 175 atgggcagcctgctccccaagctgggcctgctgctcatggatgagtacaacttgcaca 232 ||||| || |||||||||||||| |||| | |||||| ||| |||||| || |||||| Sbjct: 22016 atgggtaggctgctccccaagctcggccagatgctcaaggacgagtacgacctgcaca 21959 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 175 atgggcagcctgctccccaagctggg 200 |||||||| ||||||||||||||||| Sbjct: 5168 atgggcagtctgctccccaagctggg 5193
>dbj|AP005501.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0458D06 Length = 166038 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 336 ggtcaagctctgggccggcgaggtcagagagctctcctacgacatggagga 386 ||||||||||||||| | || ||||| ||||| ||||||||||||||||| Sbjct: 98819 ggtcaagctctgggcacgtgatgtcagggagctgtcctacgacatggagga 98869 Score = 48.1 bits (24), Expect = 0.024 Identities = 63/76 (82%) Strand = Plus / Plus Query: 322 cagctcgacaggcaggtcaagctctgggccggcgaggtcagagagctctcctacgacatg 381 ||||||||| || ||||||||||||||| | || || || ||||| ||||| |||||| Sbjct: 93002 cagctcgacgagctggtcaagctctgggcacgtgatgtgagggagctgtcctatgacatg 93061 Query: 382 gaggatgtcgtcgaca 397 ||||| ||||||||| Sbjct: 93062 gaggacatcgtcgaca 93077 Score = 44.1 bits (22), Expect = 0.37 Identities = 49/58 (84%) Strand = Plus / Minus Query: 340 aagctctgggccggcgaggtcagagagctctcctacgacatggaggatgtcgtcgaca 397 ||||||||||| |||| ||| | ||||| ||||| ||||||||||| ||||||||| Sbjct: 138498 aagctctgggcacgcgatgtccgggagctgtcctatgacatggaggacatcgtcgaca 138441 Score = 44.1 bits (22), Expect = 0.37 Identities = 49/58 (84%) Strand = Plus / Minus Query: 175 atgggcagcctgctccccaagctgggcctgctgctcatggatgagtacaacttgcaca 232 ||||| || |||||||||||||| |||| | |||||| ||| |||||| || |||||| Sbjct: 115506 atgggtaggctgctccccaagctcggccagatgctcaaggacgagtacgacctgcaca 115449 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 175 atgggcagcctgctccccaagctggg 200 |||||||| ||||||||||||||||| Sbjct: 98658 atgggcagtctgctccccaagctggg 98683 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 176 tgggcagcctgctccccaagctgggcctgctgctca 211 ||||||| ||||||||||||||||| |||||||| Sbjct: 92856 tgggcagtttgctccccaagctgggcgagctgctca 92891
>gb|AC128706.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0063F24, complete sequence Length = 152738 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 337 gtcaagctctgggccggcgaggtcagagagctctcctacgacatggagga 386 ||||||||||||| | || ||||||||||||||||||||||| ||||| Sbjct: 139665 gtcaagctctgggtgagagacgtcagagagctctcctacgacatcgagga 139714
>gb|AC134624.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041I05, complete sequence Length = 148785 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 337 gtcaagctctgggccggcgaggtcagagagctctcctacgacatggagga 386 ||||||||||||| | || ||||||||||||||||||||||| ||||| Sbjct: 36840 gtcaagctctgggtgagagacgtcagagagctctcctacgacatcgagga 36889
>dbj|AK067546.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109H16, full insert sequence Length = 3271 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 337 gtcaagctctgggccggcgaggtcagagagctctcctacgacatggagga 386 ||||||||||||| | || ||||||||||||||||||||||| ||||| Sbjct: 545 gtcaagctctgggtgagagacgtcagagagctctcctacgacatcgagga 594
>gb|AF509533.1| Aegilops tauschii putative NBS-LRR resistance protein gene, complete cds Length = 6256 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 268 gagcttgagagcatgcacgctgccctcatcaag 300 ||||||||||||||| | ||||||||||||||| Sbjct: 1463 gagcttgagagcatggaggctgccctcatcaag 1495 Score = 40.1 bits (20), Expect = 5.8 Identities = 59/72 (81%) Strand = Plus / Plus Query: 154 atggaggtcgtcacggggggcatgggcagcctgctccccaagctgggcctgctgctcatg 213 ||||||||||| || |||| ||| ||| ||| ||||||| ||| ||| | ||||||| | Sbjct: 1349 atggaggtcgtgaccggggcgatgagcaccctcctccccatgctcggcatcctgctcaag 1408 Query: 214 gatgagtacaac 225 || ||||||||| Sbjct: 1409 gaggagtacaac 1420
>ref|XM_480286.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2946 Score = 48.1 bits (24), Expect = 0.024 Identities = 63/76 (82%) Strand = Plus / Plus Query: 322 cagctcgacaggcaggtcaagctctgggccggcgaggtcagagagctctcctacgacatg 381 ||||||||| || ||||||||||||||| | || || || ||||| ||||| |||||| Sbjct: 169 cagctcgacgagctggtcaagctctgggcacgtgatgtgagggagctgtcctatgacatg 228 Query: 382 gaggatgtcgtcgaca 397 ||||| ||||||||| Sbjct: 229 gaggacatcgtcgaca 244 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 176 tgggcagcctgctccccaagctgggcctgctgctca 211 ||||||| ||||||||||||||||| |||||||| Sbjct: 23 tgggcagtttgctccccaagctgggcgagctgctca 58
>gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0056I10, complete sequence Length = 158833 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Minus Query: 319 gaccagctcgacaggcaggtcaagctctgggc 350 |||||||||||| ||||||||| ||||||||| Sbjct: 98634 gaccagctcgacgggcaggtcaggctctgggc 98603 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Minus Query: 319 gaccagctcgacaggcaggtcaagctctgggc 350 |||||||||||| ||||||||| ||||||||| Sbjct: 68534 gaccagctcgacgggcaggtcaggctctgggc 68503
>gb|AY613786.1| Aegilops tauschii isolate TA1691 clone 1 LZ-NBS-LRR class RGA gene, complete cds Length = 9601 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 268 gagcttgagagcatgcacgctgccctcatcaaggtt 303 ||||| ||||||||| | |||||||||||||||||| Sbjct: 2667 gagctggagagcatggaggctgccctcatcaaggtt 2702
>gb|AY613785.1| Aegilops tauschii isolate TA1704 clone 1 LZ-NBS-LRR class gene, complete cds Length = 11607 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 268 gagcttgagagcatgcacgctgccctcatcaaggtt 303 ||||| ||||||||| | |||||||||||||||||| Sbjct: 2684 gagctggagagcatggaggctgccctcatcaaggtt 2719
>gb|AY613783.1| Aegilops tauschii isolate TA2468 clone 1 LZ-NBS-LRR class RGA and NBS-LRR class RGA genes, complete cds Length = 15042 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 268 gagcttgagagcatgcacgctgccctcatcaaggtt 303 ||||| ||||||||| | |||||||||||||||||| Sbjct: 2688 gagctggagagcatggaggctgccctcatcaaggtt 2723
>gb|AF149113.1|AF149113 Triticum aestivum candidate stripe rust resistance Yr10 pseudogene 4E, complete sequence Length = 3662 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 268 gagcttgagagcatgcacgctgccctcatcaaggtt 303 ||||| ||||||||| | |||||||||||||||||| Sbjct: 115 gagctcgagagcatggaggctgccctcatcaaggtt 150
>gb|AF446141.1| Aegilops tauschii LZ-NBS-LRR class RGA, NBS-LRR class RGA, HCBT-like putative defense response protein, and putative alliin lyase genes, complete cds; and unknown genes Length = 106618 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 268 gagcttgagagcatgcacgctgccctcatcaaggtt 303 ||||| ||||||||| | |||||||||||||||||| Sbjct: 15691 gagctggagagcatggaggctgccctcatcaaggtt 15726
>ref|NM_194679.1| Oryza sativa (japonica cultivar-group) putative MLA6 protein (OSJNBa0056A20.8), mRNA Length = 2142 Score = 46.1 bits (23), Expect = 0.094 Identities = 47/55 (85%) Strand = Plus / Plus Query: 334 caggtcaagctctgggccggcgaggtcagagagctctcctacgacatggaggatg 388 ||||||||| ||||||| | |||| |||||| |||| |||||||||||||||| Sbjct: 181 caggtcaagatctgggcatccaaggtgagagagatctcgtacgacatggaggatg 235
>gb|AC079128.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0056A20, complete sequence Length = 151163 Score = 46.1 bits (23), Expect = 0.094 Identities = 47/55 (85%) Strand = Plus / Minus Query: 334 caggtcaagctctgggccggcgaggtcagagagctctcctacgacatggaggatg 388 ||||||||| ||||||| | |||| |||||| |||| |||||||||||||||| Sbjct: 43805 caggtcaagatctgggcatccaaggtgagagagatctcgtacgacatggaggatg 43751
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 46.1 bits (23), Expect = 0.094 Identities = 47/55 (85%) Strand = Plus / Minus Query: 334 caggtcaagctctgggccggcgaggtcagagagctctcctacgacatggaggatg 388 ||||||||| ||||||| | |||| |||||| |||| |||||||||||||||| Sbjct: 1525232 caggtcaagatctgggcatccaaggtgagagagatctcgtacgacatggaggatg 1525178
>gb|AC131967.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0049K09, complete sequence Length = 154181 Score = 46.1 bits (23), Expect = 0.094 Identities = 47/55 (85%) Strand = Plus / Minus Query: 334 caggtcaagctctgggccggcgaggtcagagagctctcctacgacatggaggatg 388 ||||||||| ||||||| | |||| |||||| |||| |||||||||||||||| Sbjct: 137986 caggtcaagatctgggcatccaaggtgagagagatctcgtacgacatggaggatg 137932
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.094 Identities = 47/55 (85%) Strand = Plus / Minus Query: 334 caggtcaagctctgggccggcgaggtcagagagctctcctacgacatggaggatg 388 ||||||||| ||||||| | |||| |||||| |||| |||||||||||||||| Sbjct: 1525232 caggtcaagatctgggcatccaaggtgagagagatctcgtacgacatggaggatg 1525178
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.094 Identities = 47/55 (85%) Strand = Plus / Minus Query: 334 caggtcaagctctgggccggcgaggtcagagagctctcctacgacatggaggatg 388 ||||||||| ||||||| | |||| |||||| |||| |||||||||||||||| Sbjct: 1525229 caggtcaagatctgggcatccaaggtgagagagatctcgtacgacatggaggatg 1525175
>ref|XM_480291.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3126 Score = 44.1 bits (22), Expect = 0.37 Identities = 49/58 (84%) Strand = Plus / Plus Query: 340 aagctctgggccggcgaggtcagagagctctcctacgacatggaggatgtcgtcgaca 397 ||||||||||| |||| ||| | ||||| ||||| ||||||||||| ||||||||| Sbjct: 187 aagctctgggcacgcgatgtccgggagctgtcctatgacatggaggacatcgtcgaca 244
>ref|XM_480288.1| Oryza sativa (japonica cultivar-group), mRNA Length = 579 Score = 44.1 bits (22), Expect = 0.37 Identities = 49/58 (84%) Strand = Plus / Plus Query: 175 atgggcagcctgctccccaagctgggcctgctgctcatggatgagtacaacttgcaca 232 ||||| || |||||||||||||| |||| | |||||| ||| |||||| || |||||| Sbjct: 19 atgggtaggctgctccccaagctcggccagatgctcaaggacgagtacgacctgcaca 76
>ref|NM_192657.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2943 Score = 44.1 bits (22), Expect = 0.37 Identities = 78/94 (82%), Gaps = 2/94 (2%) Strand = Plus / Plus Query: 304 ggcgacgtgccgcgggaccagctcgacaggcaggtcaagctctgggc-cggcgaggtcag 362 ||||| ||||| | ||| || |||||| ||||||| | ||| ||||| |||| ||||| | Sbjct: 277 ggcgaggtgccaccggagcaactcgacgggcaggtgaggctgtgggcgcggc-aggtccg 335 Query: 363 agagctctcctacgacatggaggatgtcgtcgac 396 ||| ||||||||||||||||||| | ||||||| Sbjct: 336 cgagatctcctacgacatggaggacgccgtcgac 369
>ref|XM_476559.1| Oryza sativa (japonica cultivar-group), mRNA Length = 690 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 68 ccgctgtgtctgcctctggtgctgtgttct 97 ||||||| ||||| |||||||||||||||| Sbjct: 245 ccgctgtttctgcgtctggtgctgtgttct 274
>gb|AC145366.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0014O08 map near S2137, complete sequence Length = 134033 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 362 gagagctctcctacgacatggaggat 387 ||||||||||||||||||| |||||| Sbjct: 109960 gagagctctcctacgacatcgaggat 109985
>gb|AF509534.1| Aegilops tauschii NBS-LRR-like gene sequence Length = 5171 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 274 gagagcatgcacgctgccctcatcaaggtt 303 ||||||||| | |||||||||||||||||| Sbjct: 525 gagagcatggaagctgccctcatcaaggtt 554
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Minus Query: 68 ccgctgtgtctgcctctggtgctgtgttct 97 ||||||| ||||| |||||||||||||||| Sbjct: 1936633 ccgctgtttctgcgtctggtgctgtgttct 1936604 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 70 gctgtgtctgcctctggtgctgtgttct 97 ||||| ||||||||||||| |||||||| Sbjct: 1923308 gctgtttctgcctctggtgttgtgttct 1923335
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.37 Identities = 78/94 (82%), Gaps = 2/94 (2%) Strand = Plus / Plus Query: 304 ggcgacgtgccgcgggaccagctcgacaggcaggtcaagctctgggc-cggcgaggtcag 362 ||||| ||||| | ||| || |||||| ||||||| | ||| ||||| |||| ||||| | Sbjct: 23743100 ggcgaggtgccaccggagcaactcgacgggcaggtgaggctgtgggcgcggc-aggtccg 23743158 Query: 363 agagctctcctacgacatggaggatgtcgtcgac 396 ||| ||||||||||||||||||| | ||||||| Sbjct: 23743159 cgagatctcctacgacatggaggacgccgtcgac 23743192
>dbj|AP003330.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1085F01 Length = 163671 Score = 44.1 bits (22), Expect = 0.37 Identities = 78/94 (82%), Gaps = 2/94 (2%) Strand = Plus / Plus Query: 304 ggcgacgtgccgcgggaccagctcgacaggcaggtcaagctctgggc-cggcgaggtcag 362 ||||| ||||| | ||| || |||||| ||||||| | ||| ||||| |||| ||||| | Sbjct: 120804 ggcgaggtgccaccggagcaactcgacgggcaggtgaggctgtgggcgcggc-aggtccg 120862 Query: 363 agagctctcctacgacatggaggatgtcgtcgac 396 ||| ||||||||||||||||||| | ||||||| Sbjct: 120863 cgagatctcctacgacatggaggacgccgtcgac 120896
>dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0681B11 Length = 144091 Score = 44.1 bits (22), Expect = 0.37 Identities = 78/94 (82%), Gaps = 2/94 (2%) Strand = Plus / Plus Query: 304 ggcgacgtgccgcgggaccagctcgacaggcaggtcaagctctgggc-cggcgaggtcag 362 ||||| ||||| | ||| || |||||| ||||||| | ||| ||||| |||| ||||| | Sbjct: 23685 ggcgaggtgccaccggagcaactcgacgggcaggtgaggctgtgggcgcggc-aggtccg 23743 Query: 363 agagctctcctacgacatggaggatgtcgtcgac 396 ||| ||||||||||||||||||| | ||||||| Sbjct: 23744 cgagatctcctacgacatggaggacgccgtcgac 23777
>dbj|AP004338.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0507H12 Length = 143030 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Minus Query: 68 ccgctgtgtctgcctctggtgctgtgttct 97 ||||||| ||||| |||||||||||||||| Sbjct: 141212 ccgctgtttctgcgtctggtgctgtgttct 141183 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 70 gctgtgtctgcctctggtgctgtgttct 97 ||||| ||||||||||||| |||||||| Sbjct: 127887 gctgtttctgcctctggtgttgtgttct 127914
>dbj|AP004314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0495H05 Length = 205595 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Minus Query: 68 ccgctgtgtctgcctctggtgctgtgttct 97 ||||||| ||||| |||||||||||||||| Sbjct: 20930 ccgctgtttctgcgtctggtgctgtgttct 20901 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 70 gctgtgtctgcctctggtgctgtgttct 97 ||||| ||||||||||||| |||||||| Sbjct: 7605 gctgtttctgcctctggtgttgtgttct 7632
>dbj|AK073480.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046J06, full insert sequence Length = 2966 Score = 44.1 bits (22), Expect = 0.37 Identities = 78/94 (82%), Gaps = 2/94 (2%) Strand = Plus / Plus Query: 304 ggcgacgtgccgcgggaccagctcgacaggcaggtcaagctctgggc-cggcgaggtcag 362 ||||| ||||| | ||| || |||||| ||||||| | ||| ||||| |||| ||||| | Sbjct: 152 ggcgaagtgccaccggagcaactcgacgggcaggtgaggctgtgggcgcggc-aggtccg 210 Query: 363 agagctctcctacgacatggaggatgtcgtcgac 396 ||| ||||||||||||||||||| | ||||||| Sbjct: 211 cgagatctcctacgacatggaggacgccgtcgac 244
>gb|AF527808.1| Sorghum bicolor clone BAC SBTXS_0040L6 php200725 orthologous region Length = 90923 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 358 gtcagagagctctcctacgacatggagga 386 ||||| ||||||||||||||||| ||||| Sbjct: 38743 gtcagggagctctcctacgacatagagga 38771
>gb|DP000036.1| Papio anubis target 106 genomic scaffold Length = 492848 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 tgctcatggatgagtacaact 226 ||||||||||||||||||||| Sbjct: 255210 tgctcatggatgagtacaact 255230
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Minus Query: 334 caggtcaagctctgggccggcgaggtcagagagctctcctacgacatggagga 386 |||| |||| |||||||| | || ||||||||||||||| |||||| ||||| Sbjct: 10779676 caggacaagatctgggccagggatctcagagagctctccttcgacatcgagga 10779624
>gb|AF149114.1|AF149114 Triticum aestivum stripe rust resistance protein Yr10 (Yr10) mRNA, complete cds Length = 2475 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 268 gagcttgagagcatgcacgctgccctcatcaag 300 ||||| ||||||||| | ||||||||||||||| Sbjct: 115 gagctggagagcatggaggctgccctcatcaag 147
>gb|AF149112.1|AF149112 Triticum aestivum stripe rust resistance protein Yr10 (Yr10) gene, complete cds Length = 3630 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 268 gagcttgagagcatgcacgctgccctcatcaag 300 ||||| ||||||||| | ||||||||||||||| Sbjct: 115 gagctggagagcatggaggctgccctcatcaag 147
>dbj|AP005740.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0015A04 Length = 152058 Score = 42.1 bits (21), Expect = 1.5 Identities = 42/49 (85%) Strand = Plus / Plus Query: 153 catggaggtcgtcacggggggcatgggcagcctgctccccaagctgggc 201 ||||||| ||||||| |||| ||| | |||||| |||||||||||||| Sbjct: 135757 catggagttcgtcactggggcgatgagtagcctgatccccaagctgggc 135805
>dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_D03 Length = 169378 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Minus Query: 334 caggtcaagctctgggccggcgaggtcagagagctctcctacgacatggagga 386 |||| |||| |||||||| | || ||||||||||||||| |||||| ||||| Sbjct: 119157 caggacaagatctgggccagggatctcagagagctctccttcgacatcgagga 119105
>dbj|AP004461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0443G08 Length = 162139 Score = 42.1 bits (21), Expect = 1.5 Identities = 42/49 (85%) Strand = Plus / Plus Query: 153 catggaggtcgtcacggggggcatgggcagcctgctccccaagctgggc 201 ||||||| ||||||| |||| ||| | |||||| |||||||||||||| Sbjct: 45670 catggagttcgtcactggggcgatgagtagcctgatccccaagctgggc 45718
>gb|AC139574.4| Mus musculus BAC clone RP23-477I8 from chromosome 15, complete sequence Length = 190948 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 tgcttcactgcttgagctag 41 |||||||||||||||||||| Sbjct: 189548 tgcttcactgcttgagctag 189567
>ref|XM_480115.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2967 Score = 40.1 bits (20), Expect = 5.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 154 atggaggtcgtcacggggggcatgggcagcctgctccccaagctgggc 201 |||||| ||||||| |||| ||| | |||||| |||||||||||||| Sbjct: 1 atggagttcgtcactggggcgatgagtagcctgatccccaagctgggc 48
>ref|XM_476553.1| Oryza sativa (japonica cultivar-group), mRNA Length = 234 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 70 gctgtgtctgcctctggtgctgtgttct 97 ||||| ||||||||||||| |||||||| Sbjct: 157 gctgtttctgcctctggtgttgtgttct 184
>gb|AC008581.11| Homo sapiens chromosome 5 clone CTC-564N23, complete sequence Length = 198564 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 tgcttcactgcttgagctag 41 |||||||||||||||||||| Sbjct: 4660 tgcttcactgcttgagctag 4641
>gb|U56248.1|CBRG01D9 Caenorhabditis briggsae cosmid G01D9 Length = 40031 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 gattggttgcaaagagagct 149 |||||||||||||||||||| Sbjct: 14681 gattggttgcaaagagagct 14662
>gb|AC008875.9| Homo sapiens chromosome 5 clone CTD-2201E18, complete sequence Length = 167100 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 tgctcatggatgagtacaac 225 |||||||||||||||||||| Sbjct: 158234 tgctcatggatgagtacaac 158253
>gb|AC027342.5| Homo sapiens chromosome 5 clone CTD-2294O13, complete sequence Length = 112904 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 tgcttcactgcttgagctag 41 |||||||||||||||||||| Sbjct: 75002 tgcttcactgcttgagctag 74983
>gb|AC008945.6|AC008945 Homo sapiens chromosome 5 clone CTD-2325A15, complete sequence Length = 193254 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 tgctcatggatgagtacaac 225 |||||||||||||||||||| Sbjct: 44845 tgctcatggatgagtacaac 44864
>gb|AC034114.17| Homo sapiens chromosome 8, clone RP11-775E10, complete sequence Length = 154210 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 aggcaggtcaagctctgggc 350 |||||||||||||||||||| Sbjct: 84637 aggcaggtcaagctctgggc 84656
>gb|AC022077.20| Homo sapiens 3 BAC RP11-34I16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 158176 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 agagagctgctcatggaggt 161 |||||||||||||||||||| Sbjct: 51893 agagagctgctcatggaggt 51912
>dbj|AP005553.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1116_H10 Length = 101054 Score = 40.1 bits (20), Expect = 5.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 175 atgggcagcctgctccccaagctgggcctgctgctcatggatgagtacaacttgca 230 ||||| ||||||||||| ||| ||| | |||||||| ||| ||||||||| |||| Sbjct: 58967 atggggagcctgctcccaaagatggttcagctgctcaaggaggagtacaacctgca 58912
>dbj|AP004550.2| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-60D22, complete sequence Length = 118465 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 gcctgctccccaagctgggc 201 |||||||||||||||||||| Sbjct: 23819 gcctgctccccaagctgggc 23800 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,418,037 Number of Sequences: 3902068 Number of extensions: 3418037 Number of successful extensions: 59019 Number of sequences better than 10.0: 84 Number of HSP's better than 10.0 without gapping: 89 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 58502 Number of HSP's gapped (non-prelim): 513 length of query: 432 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 410 effective length of database: 17,147,199,772 effective search space: 7030351906520 effective search space used: 7030351906520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
