ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl31a10 |
|---|---|
| Clone Library Name | barley_pub |
>UGDH_SOYBN (Q96558) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc| dehydrogenase) (UDP-GlcDH) (UDPGDH) Length = 480 Score = 56.6 bits (135), Expect = 2e-08 Identities = 24/25 (96%), Positives = 25/25 (100%) Frame = +2 Query: 134 MVKICCIGAGYVGGPTMAVIAIKCP 208 MVKICCIGAGYVGGPTMAVIA+KCP Sbjct: 1 MVKICCIGAGYVGGPTMAVIALKCP 25
>UGDH_DROME (O02373) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc| dehydrogenase) (UDP-GlcDH) (UDPGDH) (Protein sugarless) Length = 476 Score = 49.7 bits (117), Expect = 2e-06 Identities = 19/24 (79%), Positives = 23/24 (95%) Frame = +2 Query: 137 VKICCIGAGYVGGPTMAVIAIKCP 208 +K+CCIGAGYVGGPT AV+A+KCP Sbjct: 1 MKVCCIGAGYVGGPTCAVMALKCP 24
>UGDH_RAT (O70199) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc| dehydrogenase) (UDP-GlcDH) (UDPGDH) Length = 493 Score = 45.4 bits (106), Expect = 4e-05 Identities = 19/23 (82%), Positives = 20/23 (86%) Frame = +2 Query: 140 KICCIGAGYVGGPTMAVIAIKCP 208 KICCIGAGYVGGPT +VIA CP Sbjct: 6 KICCIGAGYVGGPTCSVIARMCP 28
>UGDH_MOUSE (O70475) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc| dehydrogenase) (UDP-GlcDH) (UDPGDH) Length = 493 Score = 45.4 bits (106), Expect = 4e-05 Identities = 19/23 (82%), Positives = 20/23 (86%) Frame = +2 Query: 140 KICCIGAGYVGGPTMAVIAIKCP 208 KICCIGAGYVGGPT +VIA CP Sbjct: 6 KICCIGAGYVGGPTCSVIAHMCP 28
>UGDH_HUMAN (O60701) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc| dehydrogenase) (UDP-GlcDH) (UDPGDH) Length = 494 Score = 45.4 bits (106), Expect = 4e-05 Identities = 19/23 (82%), Positives = 20/23 (86%) Frame = +2 Query: 140 KICCIGAGYVGGPTMAVIAIKCP 208 KICCIGAGYVGGPT +VIA CP Sbjct: 6 KICCIGAGYVGGPTCSVIAHMCP 28
>UGDH_BOVIN (P12378) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc| dehydrogenase) (UDP-GlcDH) (UDPGDH) Length = 494 Score = 45.4 bits (106), Expect = 4e-05 Identities = 19/23 (82%), Positives = 20/23 (86%) Frame = +2 Query: 140 KICCIGAGYVGGPTMAVIAIKCP 208 KICCIGAGYVGGPT +VIA CP Sbjct: 6 KICCIGAGYVGGPTCSVIAHMCP 28
>UGDH_CAEEL (Q19905) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc| dehydrogenase) (UDP-GlcDH) (UDPGDH) (Squashed vulva protein 4) Length = 481 Score = 44.7 bits (104), Expect = 7e-05 Identities = 18/26 (69%), Positives = 22/26 (84%) Frame = +2 Query: 131 KMVKICCIGAGYVGGPTMAVIAIKCP 208 K+ K+ C+GAGYVGGPT A+IA KCP Sbjct: 8 KVSKVVCVGAGYVGGPTCAMIAHKCP 33
>PKNF_MYCTU (P72003) Probable serine/threonine-protein kinase pknF (EC| 2.7.11.1) Length = 476 Score = 30.0 bits (66), Expect = 1.7 Identities = 16/44 (36%), Positives = 21/44 (47%) Frame = -3 Query: 192 MTAIVGPPT*PAPMQQIFTILAAYNQISATRRRSREEGRGAHCW 61 +TA P P P++Q I Q TRR REE R ++ W Sbjct: 432 VTATADPTEAPLPIEQESPIRVCMQQTGQTRRECREEIRRSNGW 475
>PKNF_MYCBO (Q7TZN1) Probable serine/threonine-protein kinase pknF (EC| 2.7.11.1) Length = 476 Score = 30.0 bits (66), Expect = 1.7 Identities = 16/44 (36%), Positives = 21/44 (47%) Frame = -3 Query: 192 MTAIVGPPT*PAPMQQIFTILAAYNQISATRRRSREEGRGAHCW 61 +TA P P P++Q I Q TRR REE R ++ W Sbjct: 432 VTATADPTEAPLPIEQESPIRVCMQQTGQTRRECREEIRRSNGW 475
>Y428_METJA (Q57871) Hypothetical protein MJ0428 (EC 1.1.1.-)| Length = 427 Score = 29.6 bits (65), Expect = 2.2 Identities = 11/21 (52%), Positives = 17/21 (80%) Frame = +2 Query: 140 KICCIGAGYVGGPTMAVIAIK 202 +IC IG GY+G PT +++AI+ Sbjct: 12 RICVIGLGYIGLPTASMLAIQ 32
>RTX31_ACTPL (P55130) RTX-III toxin determinant A from serotype 2 (APX-IIIA)| (Cytolysin IIIA) (CLY-IIIA) Length = 1049 Score = 28.1 bits (61), Expect = 6.5 Identities = 13/36 (36%), Positives = 18/36 (50%) Frame = -2 Query: 109 SNSEKISRGGEGRALLEESNGGDFLVCREEAAAHEL 2 S+ + GGEG LE +G DF V R + H + Sbjct: 836 SSGSDLLDGGEGNDYLEGGDGSDFYVYRSTSGNHTI 871
>RTX32_ACTPL (P55131) RTX-III toxin determinant A from serotype 8 (APX-IIIA)| (Cytolysin IIIA) (CLY-IIIA) Length = 1052 Score = 28.1 bits (61), Expect = 6.5 Identities = 13/36 (36%), Positives = 18/36 (50%) Frame = -2 Query: 109 SNSEKISRGGEGRALLEESNGGDFLVCREEAAAHEL 2 S+ + GGEG LE +G DF V R + H + Sbjct: 837 SSGSDLLDGGEGNDYLEGGDGSDFYVYRSTSGNHTI 872 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,442,268 Number of Sequences: 219361 Number of extensions: 464792 Number of successful extensions: 1690 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1667 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1689 length of database: 80,573,946 effective HSP length: 45 effective length of database: 70,702,701 effective search space used: 1696864824 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
