ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl31a08 |
|---|---|
| Clone Library Name | barley_pub |
>UBE11_WHEAT (P20973) Ubiquitin-activating enzyme E1 1| Length = 1051 Score = 131 bits (330), Expect = 6e-31 Identities = 70/87 (80%), Positives = 70/87 (80%) Frame = +3 Query: 183 MLPRKREIVAGEVEDLQKKXXXXXXXXXXXXXXXXMARRGNEIDEDLHSRQLAVYGRETM 362 MLPRKREIVAGEVEDLQKK MA RGNEIDEDLHSRQLAVYGRETM Sbjct: 1 MLPRKREIVAGEVEDLQKKTRAGEGEVTREEGDAAMAGRGNEIDEDLHSRQLAVYGRETM 60 Query: 363 KRLFGSNVLVSGLQGLGAEIAKNLVLA 443 KRLFGSNVLVSGLQGLGAEIAKNLVLA Sbjct: 61 KRLFGSNVLVSGLQGLGAEIAKNLVLA 87
>UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2| Length = 1051 Score = 129 bits (324), Expect = 3e-30 Identities = 69/87 (79%), Positives = 69/87 (79%) Frame = +3 Query: 183 MLPRKREIVAGEVEDLQKKXXXXXXXXXXXXXXXXMARRGNEIDEDLHSRQLAVYGRETM 362 MLPRKREIVAGEVEDLQKK MA RGNEIDEDLHSRQLAVYGRETM Sbjct: 1 MLPRKREIVAGEVEDLQKKTRAGEGEATREEGDAAMAGRGNEIDEDLHSRQLAVYGRETM 60 Query: 363 KRLFGSNVLVSGLQGLGAEIAKNLVLA 443 K LFGSNVLVSGLQGLGAEIAKNLVLA Sbjct: 61 KPLFGSNVLVSGLQGLGAEIAKNLVLA 87
>UBE13_WHEAT (P31252) Ubiquitin-activating enzyme E1 3| Length = 1053 Score = 82.0 bits (201), Expect = 6e-16 Identities = 41/46 (89%), Positives = 43/46 (93%) Frame = +3 Query: 306 EIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLA 443 EIDEDLHSRQLAVYGRETM+RLF S+VLVSGL GLGAEIAKNL LA Sbjct: 45 EIDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLGAEIAKNLALA 90 Score = 30.8 bits (68), Expect = 1.6 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = +3 Query: 324 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVL 440 + Q++V+G + K++ +N V G LG E KNL L Sbjct: 448 YDAQVSVFGSKLQKKMEEANTFVVGSGALGCEFLKNLAL 486
>UBE1_RABIT (Q29504) Ubiquitin-activating enzyme E1| Length = 1058 Score = 64.3 bits (155), Expect = 1e-10 Identities = 35/53 (66%), Positives = 42/53 (79%), Gaps = 2/53 (3%) Frame = +3 Query: 288 MARRGNE--IDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVL 440 MA+ G+E IDE L+SRQL V G E MKRL S+VLVSGL+GLG EIAKN++L Sbjct: 41 MAKNGSEADIDEGLYSRQLYVLGHEAMKRLQTSSVLVSGLRGLGVEIAKNIIL 93
>UBE1_HUMAN (P22314) Ubiquitin-activating enzyme E1 (A1S9 protein)| Length = 1058 Score = 64.3 bits (155), Expect = 1e-10 Identities = 35/53 (66%), Positives = 42/53 (79%), Gaps = 2/53 (3%) Frame = +3 Query: 288 MARRGNE--IDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVL 440 MA+ G+E IDE L+SRQL V G E MKRL S+VLVSGL+GLG EIAKN++L Sbjct: 41 MAKNGSEADIDEGLYSRQLYVLGHEAMKRLQTSSVLVSGLRGLGVEIAKNIIL 93
>UBE1_MOUSE (Q02053) Ubiquitin-activating enzyme E1 1| Length = 1058 Score = 62.4 bits (150), Expect = 5e-10 Identities = 34/53 (64%), Positives = 41/53 (77%), Gaps = 2/53 (3%) Frame = +3 Query: 288 MARRGNE--IDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVL 440 MA+ G+E IDE L+SRQL V G E MK L S+VLVSGL+GLG EIAKN++L Sbjct: 41 MAKNGSEADIDESLYSRQLYVLGHEAMKMLQTSSVLVSGLRGLGVEIAKNIIL 93
>UBE1L_HUMAN (P41226) Ubiquitin-activating enzyme E1 homolog (D8)| Length = 1011 Score = 61.2 bits (147), Expect = 1e-09 Identities = 30/44 (68%), Positives = 37/44 (84%) Frame = +3 Query: 309 IDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVL 440 +DE+L+SRQL V G M+R+ G+ VLVSGLQGLGAE+AKNLVL Sbjct: 10 LDEELYSRQLYVLGSPAMQRIQGARVLVSGLQGLGAEVAKNLVL 53
>UBA1_YEAST (P22515) Ubiquitin-activating enzyme E1 1| Length = 1024 Score = 59.7 bits (143), Expect = 3e-09 Identities = 30/46 (65%), Positives = 37/46 (80%) Frame = +3 Query: 306 EIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLA 443 EIDE L+SRQL V G+E M ++ SNVL+ GL+GLG EIAKN+VLA Sbjct: 13 EIDESLYSRQLYVLGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLA 58
>UBA1_SCHPO (O94609) Ubiquitin-activating enzyme E1 1 (Poly(A)+ RNA transport| protein 3) Length = 1012 Score = 57.4 bits (137), Expect = 2e-08 Identities = 29/47 (61%), Positives = 35/47 (74%) Frame = +3 Query: 303 NEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLA 443 N IDE L+SRQL V G E MK++ SNVL+ G +GLG EIAKN+ LA Sbjct: 13 NTIDEGLYSRQLYVLGHEAMKQMSQSNVLIIGCKGLGVEIAKNVCLA 59
>ULE1A_HUMAN (Q9UBE0) Ubiquitin-like 1-activating enzyme E1A (SUMO-1-activating| enzyme subunit 1) Length = 346 Score = 49.7 bits (117), Expect = 3e-06 Identities = 24/40 (60%), Positives = 31/40 (77%) Frame = +3 Query: 324 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLA 443 + RQ+ ++G E KRL S VL+ GL+GLGAEIAKNL+LA Sbjct: 19 YDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILA 58
>ULE1A_MOUSE (Q9R1T2) Ubiquitin-like 1-activating enzyme E1A (SUMO-1-activating| enzyme subunit 1) Length = 350 Score = 49.7 bits (117), Expect = 3e-06 Identities = 23/40 (57%), Positives = 31/40 (77%) Frame = +3 Query: 324 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLA 443 + RQ+ ++G E KRL S VL+ G++GLGAEIAKNL+LA Sbjct: 23 YDRQIRLWGLEAQKRLRASRVLIVGMKGLGAEIAKNLILA 62
>ULA1_RAT (Q9Z1A5) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (Amyloid beta precursor protein-binding protein 1, 59 kDa) (APP-BP1) Length = 534 Score = 34.3 bits (77), Expect = 0.14 Identities = 18/51 (35%), Positives = 28/51 (54%) Frame = +3 Query: 288 MARRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVL 440 MA++G + E + RQL ++G + L ++V + G EI KNLVL Sbjct: 1 MAQQGKILKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVL 51
>UBA3_SCHPO (Q09765) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme E1 3) Length = 444 Score = 33.5 bits (75), Expect = 0.24 Identities = 15/30 (50%), Positives = 20/30 (66%) Frame = +3 Query: 354 ETMKRLFGSNVLVSGLQGLGAEIAKNLVLA 443 ET+K F S +L+ G GLG EI K+L L+ Sbjct: 37 ETLKSAFSSKILIIGAGGLGCEILKDLALS 66
>ULA1_MOUSE (Q8VBW6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (Amyloid beta precursor protein-binding protein 1, 59 kDa) (APP-BP1) Length = 534 Score = 33.1 bits (74), Expect = 0.31 Identities = 18/51 (35%), Positives = 27/51 (52%) Frame = +3 Query: 288 MARRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVL 440 MA+ G + E + RQL ++G + L ++V + G EI KNLVL Sbjct: 1 MAQPGKILKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVL 51
>ULA1_HUMAN (Q13564) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (Amyloid beta precursor protein-binding protein 1, 59 kDa) (APP-BP1) (Protooncogene protein 1) (HPP1) Length = 534 Score = 33.1 bits (74), Expect = 0.31 Identities = 18/51 (35%), Positives = 27/51 (52%) Frame = +3 Query: 288 MARRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVL 440 MA+ G + E + RQL ++G + L ++V + G EI KNLVL Sbjct: 1 MAQLGKLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVL 51
>ULA1_MACFA (Q4R3L6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (Amyloid beta precursor protein-binding protein 1, 59 kDa) (APP-BP1) Length = 510 Score = 33.1 bits (74), Expect = 0.31 Identities = 18/51 (35%), Positives = 27/51 (52%) Frame = +3 Query: 288 MARRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVL 440 MA+ G + E + RQL ++G + L ++V + G EI KNLVL Sbjct: 1 MAQPGKLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVL 51
>ULE1B_MOUSE (Q9Z1F9) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating| enzyme subunit 2) (Anthracycline-associated resistance ARX) Length = 638 Score = 31.2 bits (69), Expect = 1.2 Identities = 15/30 (50%), Positives = 19/30 (63%) Frame = +3 Query: 351 RETMKRLFGSNVLVSGLQGLGAEIAKNLVL 440 RE + + G VLV G G+G E+ KNLVL Sbjct: 9 RELAEAVSGGRVLVVGAGGIGCELLKNLVL 38
>ULE1B_HUMAN (Q9UBT2) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating| enzyme subunit 2) (Anthracycline-associated resistance ARX) Length = 640 Score = 31.2 bits (69), Expect = 1.2 Identities = 15/30 (50%), Positives = 19/30 (63%) Frame = +3 Query: 351 RETMKRLFGSNVLVSGLQGLGAEIAKNLVL 440 RE + + G VLV G G+G E+ KNLVL Sbjct: 9 RELAEAVAGGRVLVVGAGGIGCELLKNLVL 38
>RHC31_YEAST (Q06624) DNA damage tolerance protein RHC31 (RAD31 homolog)| Length = 347 Score = 30.8 bits (68), Expect = 1.6 Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 3/55 (5%) Frame = +3 Query: 288 MARRGNEIDED---LHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLA 443 M + ++ ED L+ RQ+ ++G + + VL+ L +G+EI K++VL+ Sbjct: 1 MDMKVEKLSEDEIALYDRQIRLWGMTAQANMRSAKVLLINLGAIGSEITKSIVLS 55
>ULA1_CHICK (Q5ZIE6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (APP-BP1) Length = 535 Score = 30.8 bits (68), Expect = 1.6 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = +3 Query: 288 MARRGN-EIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVL 440 MA+ G + E + RQL ++G + L ++V V G EI KNLVL Sbjct: 1 MAQPGRASLKEQRYDRQLRLWGDHGQEALESAHVCVINATATGTEILKNLVL 52
>CP2D6_HUMAN (P10635) Cytochrome P450 2D6 (EC 1.14.14.1) (CYPIID6) (P450-DB1)| (Debrisoquine 4-hydroxylase) Length = 497 Score = 30.8 bits (68), Expect = 1.6 Identities = 22/49 (44%), Positives = 26/49 (53%) Frame = -3 Query: 371 EALHGLAAIDGELATVQVLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 225 EAL LA I +A +LVDL+ + PG LPLPG G LL V Sbjct: 4 EALVPLAVI---VAIFLLLVDLMHRRQRWAARYPPGPLPLPGLGNLLHV 49
>RAD31_SCHPO (P79064) DNA damage tolerance protein rad31| Length = 307 Score = 30.4 bits (67), Expect = 2.0 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = +3 Query: 321 LHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLA 443 L+ RQ+ ++G + L S VL+ L EIAKNLVL+ Sbjct: 13 LYDRQIRLWGFNAQQALKQSRVLLITASPLANEIAKNLVLS 53
>UBA3_CAEEL (Q19360) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme 3 homolog) (Ectopic membrane ruffles in embryo protein 1) Length = 430 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +3 Query: 342 VYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLA 443 V G E + L + +LV G GLG E+ KNL L+ Sbjct: 31 VPGPENFEALQNTKILVIGAGGLGCELLKNLALS 64
>HESA1_ANAVT (P46049) Protein hesA, heterocyst| Length = 267 Score = 30.0 bits (66), Expect = 2.7 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%) Frame = +3 Query: 324 HSRQLAV--YGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLA 443 +SRQ+ + +G KRL + VLV+G+ GLG A L +A Sbjct: 12 YSRQMMLPNFGEAAQKRLKSATVLVTGVGGLGGTAALYLAVA 53
>YBHO_SALTY (Q8ZQP4) Putative cardiolipin synthetase ybhO (EC 2.7.8.-)| (Cardiolipin synthase) (CL synthase) Length = 413 Score = 30.0 bits (66), Expect = 2.7 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%) Frame = +2 Query: 320 PAQSPARRLWPRDHEA-----PLRLQRPRLWTSGSRCRD 421 P QSPARR W R H+A P Q +W RD Sbjct: 168 PGQSPARRWWKRHHQAEENRHPGEAQALFVWRDNEEHRD 206
>YBHO_SALTI (Q8Z883) Putative cardiolipin synthetase ybhO (EC 2.7.8.-)| (Cardiolipin synthase) (CL synthase) Length = 413 Score = 30.0 bits (66), Expect = 2.7 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%) Frame = +2 Query: 320 PAQSPARRLWPRDHEA-----PLRLQRPRLWTSGSRCRD 421 P QSPARR W R H+A P Q +W RD Sbjct: 168 PGQSPARRWWKRHHQAEENRHPGEAQALFVWRDNEEHRD 206
>ULA1_XENLA (Q6NTW6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (APP-BP1) Length = 533 Score = 29.6 bits (65), Expect = 3.5 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = +3 Query: 309 IDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVL 440 I E + RQL ++G + L ++V + G EI KNLVL Sbjct: 7 IKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVL 50
>HESA2_ANAVT (P46048) Protein hesA, vegetative| Length = 265 Score = 29.6 bits (65), Expect = 3.5 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = +3 Query: 345 YGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLA 443 +G+E +RL + VLV+G+ GLG A L +A Sbjct: 21 FGQEAQQRLKSATVLVTGVGGLGGTAALYLAIA 53
>CP2DQ_RAT (P10634) Cytochrome P450 2D26 (EC 1.14.14.1) (CYPIID26) (P450-DB2)| (P450-CMF2) (Debrisoquine 4-hydroxylase) Length = 500 Score = 29.3 bits (64), Expect = 4.5 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = -3 Query: 320 VLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 225 +LVDLV + PG +PLPG G LLQV Sbjct: 21 LLVDLVHRHKFWTAHYPPGPVPLPGLGNLLQV 52
>CP2DH_MACFA (Q29488) Cytochrome P450 2D17 (EC 1.14.14.1) (CYPIID17)| Length = 497 Score = 29.3 bits (64), Expect = 4.5 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -3 Query: 365 LHGLAAIDGELATVQVLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 225 L L + +A +LVDL+ + PG LPLPG G LL V Sbjct: 3 LDALVPLAVTVAIFLLLVDLMHRRQRWAARYPPGPLPLPGLGNLLHV 49
>CP2D6_PANTR (Q2XNC8) Cytochrome P450 2D6 (EC 1.14.14.1) (CYPIID6)| Length = 497 Score = 29.3 bits (64), Expect = 4.5 Identities = 21/49 (42%), Positives = 25/49 (51%) Frame = -3 Query: 371 EALHGLAAIDGELATVQVLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 225 EAL LA I + +LVDL+ + PG LPLPG G LL V Sbjct: 4 EALVPLAVI---VTIFLLLVDLMHRRQRWAARYPPGPLPLPGLGNLLHV 49
>CP2D6_PANPA (Q2XNC9) Cytochrome P450 2D6 (EC 1.14.14.1) (CYPIID6)| Length = 497 Score = 29.3 bits (64), Expect = 4.5 Identities = 21/49 (42%), Positives = 25/49 (51%) Frame = -3 Query: 371 EALHGLAAIDGELATVQVLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 225 EAL LA I + +LVDL+ + PG LPLPG G LL V Sbjct: 4 EALVPLAVI---VTIFLLLVDLMHRRQRWAARYPPGPLPLPGLGNLLHV 49
>CP2DP_PIG (O46658) Cytochrome P450 2D25 (EC 1.14.14.-) (CYPIID25) (Vitamin| D(3) 25-hydroxylase) Length = 499 Score = 29.3 bits (64), Expect = 4.5 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = -3 Query: 320 VLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 225 +LVDL+ + PG +PLPG G LLQV Sbjct: 20 LLVDLMHRRSRWAPRYPPGPMPLPGLGNLLQV 51
>CP2DJ_CALJA (O18992) Cytochrome P450 2D19 (EC 1.14.14.1) (CYPIID19) (P450| CM2D-1) Length = 497 Score = 28.5 bits (62), Expect = 7.7 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = -3 Query: 365 LHGLAAIDGELATVQVLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 225 L L + +A +LVDL+ + PG +PLPG G LL V Sbjct: 3 LDALVPLAVTVAIFVLLVDLMHRRQRWAARYPPGPMPLPGLGNLLHV 49 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,755,581 Number of Sequences: 219361 Number of extensions: 785783 Number of successful extensions: 2904 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 2802 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2902 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2618960580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
