>U202A_ARATH (Q9XIK4) Hypothetical UPF0202 protein At1g10490|
          Length = 1058

 Score =  177 bits (448), Expect(2) = 2e-48
 Identities = 81/112 (72%), Positives = 101/112 (90%)
 Frame = +3

Query: 87  KKVDERIRTLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKL 266
           KKVDERIRTLIENGV+ R RSMF+I+GDK+RDQIVNL+++L+KS VKS PSVLWCY+N+L
Sbjct: 3   KKVDERIRTLIENGVKLRHRSMFVIIGDKARDQIVNLHHILSKSVVKSNPSVLWCYKNRL 62

Query: 267 EISSHRKKRAKQIKKLMQRGLMDPEKADPFSLFLETSDITYCMYKDSERVLG 422
           +ISSH KKRAKQ+KK+ +RG +DPEK D FSLFL+  D+T+C+YKDSER+LG
Sbjct: 63  DISSHNKKRAKQLKKMKERGQLDPEKLDAFSLFLDVVDVTHCLYKDSERILG 114



 Score = 34.7 bits (78), Expect(2) = 2e-48
 Identities = 14/16 (87%), Positives = 16/16 (100%)
 Frame = +2

Query: 422 HTFGMCILQDFEALTP 469
           +TFG+CILQDFEALTP
Sbjct: 115 NTFGICILQDFEALTP 130

>U202B_ARATH (Q9M2Q4) Hypothetical UPF0202 protein At3g57940|
          Length = 1024

 Score =  166 bits (420), Expect(2) = 1e-45
 Identities = 75/112 (66%), Positives = 98/112 (87%)
 Frame = +3

Query: 87  KKVDERIRTLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKL 266
           KKVDERIRTLIENGV+ R RSMF+I+GDKSRDQIVNL++ML+K+ +K  PSVLWCY++KL
Sbjct: 3   KKVDERIRTLIENGVKLRHRSMFVIIGDKSRDQIVNLHHMLSKAVIKCNPSVLWCYKDKL 62

Query: 267 EISSHRKKRAKQIKKLMQRGLMDPEKADPFSLFLETSDITYCMYKDSERVLG 422
           +ISSH++KR+KQ+K+L +RG +DPEK D FS  L+   +T+C+YKDSER+LG
Sbjct: 63  DISSHKQKRSKQLKRLRERGQLDPEKLDAFSRLLDVGRVTHCLYKDSERILG 114



 Score = 36.2 bits (82), Expect(2) = 1e-45
 Identities = 15/16 (93%), Positives = 16/16 (100%)
 Frame = +2

Query: 422 HTFGMCILQDFEALTP 469
           +TFGMCILQDFEALTP
Sbjct: 115 NTFGMCILQDFEALTP 130

>ALP_HUMAN (Q9H0A0) N-acetyltransferase-like protein (EC 2.3.1.-)|
          Length = 1025

 Score =  139 bits (349), Expect(2) = 2e-37
 Identities = 60/112 (53%), Positives = 90/112 (80%)
 Frame = +3

Query: 87  KKVDERIRTLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKL 266
           KKVD RIR LIENGV +RQRS+F++VGD+ +DQ+V L++ML+K+ VK+RPSVLWCY+ +L
Sbjct: 4   KKVDNRIRILIENGVAERQRSLFVVVGDRGKDQVVILHHMLSKATVKARPSVLWCYKKEL 63

Query: 267 EISSHRKKRAKQIKKLMQRGLMDPEKADPFSLFLETSDITYCMYKDSERVLG 422
             SSHRKKR +Q++K ++ G ++ ++ DPF LF+  ++I YC Y ++ ++LG
Sbjct: 64  GFSSHRKKRMRQLQKKIKNGTLNIKQDDPFELFIAATNIRYCYYNETHKILG 115



 Score = 35.8 bits (81), Expect(2) = 2e-37
 Identities = 14/16 (87%), Positives = 16/16 (100%)
 Frame = +2

Query: 422 HTFGMCILQDFEALTP 469
           +TFGMC+LQDFEALTP
Sbjct: 116 NTFGMCVLQDFEALTP 131

>YDK9_SCHPO (P87115) Hypothetical UPF0202 protein C20G8.09c in chromosome I|
          Length = 1033

 Score =  132 bits (331), Expect(2) = 9e-34
 Identities = 59/113 (52%), Positives = 89/113 (78%), Gaps = 1/113 (0%)
 Frame = +3

Query: 87  KKVDERIRTLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLAKSRVKSRPSVLWCY-RNK 263
           K +D RI TLI+NG +++QRS F++VGD++RDQ+VNL+++L++S+V +RP+VLW Y ++ 
Sbjct: 4   KALDSRIPTLIKNGCQEKQRSFFVVVGDRARDQVVNLHWLLSQSKVAARPNVLWMYKKDL 63

Query: 264 LEISSHRKKRAKQIKKLMQRGLMDPEKADPFSLFLETSDITYCMYKDSERVLG 422
           L  +SHRKKR  +IKK ++RG+ DP   DPF LF   ++I YC YK+SE++LG
Sbjct: 64  LGFTSHRKKRENKIKKEIKRGIRDPNSEDPFELFCSITNIRYCYYKESEKILG 116



 Score = 30.4 bits (67), Expect(2) = 9e-34
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +2

Query: 425 TFGMCILQDFEALTP 469
           T+GM +LQDFEALTP
Sbjct: 118 TYGMLVLQDFEALTP 132

>YNN2_YEAST (P53914) Hypothetical UPF0202 protein YNL132w|
          Length = 1056

 Score =  113 bits (283), Expect(2) = 1e-29
 Identities = 53/113 (46%), Positives = 80/113 (70%), Gaps = 1/113 (0%)
 Frame = +3

Query: 87  KKVDERIRTLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNK- 263
           K +D RI +LI NGV+ +QRS+F+IVGD++R+Q+ NL+Y++  + +K   SVLW Y+ K 
Sbjct: 4   KAIDSRIPSLIRNGVQTKQRSIFVIVGDRARNQLPNLHYLMMSADLKMNKSVLWAYKKKL 63

Query: 264 LEISSHRKKRAKQIKKLMQRGLMDPEKADPFSLFLETSDITYCMYKDSERVLG 422
           L  +SHRKKR  +IKK ++RG  +  + DPF  F+   +I Y  YK+SE++LG
Sbjct: 64  LGFTSHRKKRENKIKKEIKRGTREVNEMDPFESFISNQNIRYVYYKESEKILG 116



 Score = 35.0 bits (79), Expect(2) = 1e-29
 Identities = 14/16 (87%), Positives = 16/16 (100%)
 Frame = +2

Query: 422 HTFGMCILQDFEALTP 469
           +T+GMCILQDFEALTP
Sbjct: 117 NTYGMCILQDFEALTP 132

>YIL8_CAEEL (O01757) Hypothetical UPF0202 protein F55A12.8 in chromosome I|
          Length = 1043

 Score =  117 bits (294), Expect(2) = 3e-29
 Identities = 55/111 (49%), Positives = 78/111 (70%)
 Frame = +3

Query: 90  KVDERIRTLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKLE 269
           K+D RIRT IENGV    RSMF +VGDK+RDQ+  L ++L+KS V +RP+VLWCY+ +L 
Sbjct: 4   KLDGRIRTQIENGVASGHRSMFAVVGDKARDQVPILYHILSKSTVSARPNVLWCYKKELS 63

Query: 270 ISSHRKKRAKQIKKLMQRGLMDPEKADPFSLFLETSDITYCMYKDSERVLG 422
            S+HR K+AK++KK           ADPF +F+ ++ I YC Y ++E++LG
Sbjct: 64  FSTHRAKKAKKMKKATTTISGSLPDADPFDVFISSTQIRYCYYNETEKILG 114



 Score = 29.6 bits (65), Expect(2) = 3e-29
 Identities = 11/16 (68%), Positives = 15/16 (93%)
 Frame = +2

Query: 422 HTFGMCILQDFEALTP 469
           +TFG+ +LQDFEA+TP
Sbjct: 115 NTFGVLVLQDFEAMTP 130

>U202_DROME (Q9W3C1) Polycomb protein l(1)G0020 (p110 protein)|
          Length = 1008

 Score =  103 bits (256), Expect(2) = 8e-26
 Identities = 57/113 (50%), Positives = 76/113 (67%), Gaps = 1/113 (0%)
 Frame = +3

Query: 87  KKVDERIRTLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKL 266
           KK+D RIR +IENGV+   R+MFI++GDK+RDQ+  L  +L KS VK+RP+VLWCY+NK 
Sbjct: 4   KKIDNRIRVMIENGVKLGHRTMFIVIGDKARDQVPILYDILTKSTVKARPTVLWCYKNKD 63

Query: 267 E-ISSHRKKRAKQIKKLMQRGLMDPEKADPFSLFLETSDITYCMYKDSERVLG 422
           E IS+H KKRAK+I      G +D  +AD F  F   + I    Y ++  VLG
Sbjct: 64  EAISNHGKKRAKKIAV----GKVDVNEADLFDSFRVATTIHGRYYSETHAVLG 112



 Score = 32.7 bits (73), Expect(2) = 8e-26
 Identities = 12/15 (80%), Positives = 15/15 (100%)
 Frame = +2

Query: 425 TFGMCILQDFEALTP 469
           T+G+C+LQDFEALTP
Sbjct: 114 TYGVCVLQDFEALTP 128

>BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein shortsighted)|
          Length = 1206

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +2

Query: 182  PDRQPQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQADQE 310
            P   P L     P  +A  + L++PQQ + QQ QEE +Q  Q+
Sbjct: 902  PQAIPTLQLQSAPSTIADPQQLMVPQQQQQQQHQEEQQQQPQQ 944

>CN102_MOUSE (Q80XC6) Protein C14orf102 homolog|
          Length = 1172

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
 Frame = +3

Query: 171 KSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKLEISSHRKKRAKQIKKLMQRGLMDPEKAD 350
           KS+  +  L Y +AK        V+WC   K       K + K  KKL +  L +PE  +
Sbjct: 738 KSQLSLSWLRYEIAK--------VIWCLHTK---KKRLKSQGKSCKKLAKNLLKEPENRN 786

Query: 351 PFSLFLETSDITYCM--YKDSERVLGTRLACA 440
            F L+ + + + + +   +D+ +V  T L+ A
Sbjct: 787 NFCLWKQYAHLEWLLGNTEDARKVFDTALSMA 818

>CN102_HUMAN (Q9H7Z3) Protein C14orf102|
          Length = 1164

 Score = 32.3 bits (72), Expect = 0.63
 Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
 Frame = +3

Query: 195 LNYMLAKSRVKSRPSVLWCYRNKLEISSHRKKRAKQIKKLMQRGLMDPEKADPFSLFLET 374
           L Y +AK        V+WC   K +     K + K  KKL +  L +PE  + F L+ + 
Sbjct: 737 LQYEIAK--------VIWCLHTKNK--KRLKSQGKNCKKLAKNLLKEPENCNNFCLWKQY 786

Query: 375 SDITYCM--YKDSERVLGTRLACAYCR 449
           + + + +   +D+ +V  T L  A  R
Sbjct: 787 AHLEWLLGNTEDARKVFDTALGMAGSR 813

>GPA12_CAEEL (Q19572) Guanine nucleotide-binding protein alpha-12 subunit|
          Length = 355

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
 Frame = +3

Query: 120 ENGVRQRQRSMFII--VGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKLEISSHRKKR 293
           E+G     + M II   G+ + D++      + ++ + S   VL   RNKL I+    KR
Sbjct: 39  ESGKSTFVKQMHIIHGAGEFTADEVRAYRQQIYQNAI-SAMRVLLDARNKLGIAWEDPKR 97

Query: 294 AKQIKKLMQRGLMDPEKADPFSLFLETSDITYCMYKDS 407
             +++K+M+  + D  K   F+ F+E + I    + D+
Sbjct: 98  QVEVEKVMRFSVGDLLKGIDFTTFVEVAPIISDFWNDA 135

>DPOG1_MOUSE (P54099) DNA polymerase gamma subunit 1 (EC 2.7.7.7) (Mitochondrial|
           DNA polymerase catalytic subunit) (PolG-alpha)
          Length = 1239

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 24/94 (25%), Positives = 42/94 (44%)
 Frame = +3

Query: 99  ERIRTLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKLEISS 278
           ER  T  +N   + QR M   + D + D       +L+  R K  P   W +  + ++  
Sbjct: 425 ERYLTEAQNTYEELQREMKKSLMDLANDAC----QLLSGERYKEDP---WLWDLEWDLQE 477

Query: 279 HRKKRAKQIKKLMQRGLMDPEKADPFSLFLETSD 380
            ++K+AK++KK      +  E A PF   ++  D
Sbjct: 478 FKQKKAKKVKKPASASKLPIEGAGPFGDPMDQED 511

>OCTB1_DROME (Q9VCZ3) Octopamine receptor beta-1 (DmOct-beta-1R) (DmOA2)|
          Length = 508

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 18/62 (29%), Positives = 30/62 (48%)
 Frame = -2

Query: 445 QYAHAKRVPRTLSESLYMQ*VMSEVSRKREKGSAFSGSMSPRCMSFLICLARFFLWLLIS 266
           ++    ++P+        Q  +S + R+R+        MS    +FLIC   FFLW ++S
Sbjct: 318 KHLQISQIPKPRPSIQVEQSTISTMRRERKAARTLGIIMS----AFLICWLPFFLWYIVS 373

Query: 265 SL 260
           SL
Sbjct: 374 SL 375

>GPA12_CAEBR (Q613V4) Guanine nucleotide-binding protein alpha-12 subunit|
          Length = 355

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
 Frame = +3

Query: 120 ENGVRQRQRSMFII--VGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKLEISSHRKKR 293
           E+G     + M II   G+ + D++      + ++ + S   VL   RNKL I+    KR
Sbjct: 39  ESGKSTFVKQMHIIHGAGEFTADEVRAYRQQIYQNAI-SAMRVLLDARNKLGIAWEDPKR 97

Query: 294 AKQIKKLMQRGLMDPEKADPFSLFLETSDITYCMYKDS 407
             +++K+M+  + D  K   F+ F+E + I    + D+
Sbjct: 98  QVEVEKVMRFTVGDLLKGIDFTTFVEVAPIISDFWNDA 135

>AGO2_DROME (Q9VUQ5) Argonaute 2 protein|
          Length = 1214

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +2

Query: 188 RQPQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQADQE 310
           RQ Q    Q P+Q+   + L  PQQ + QQP ++ +Q+ ++
Sbjct: 30  RQQQPQQLQQPQQLQQPQQLQQPQQQQQQQPHQQQQQSSRQ 70

>LMBL3_MOUSE (Q8BLB7) Lethal(3)malignant brain tumor-like 3 protein|
           (L(3)mbt-like 3 protein)
          Length = 883

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +2

Query: 194 PQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQADQEAHAARA 328
           P +   Q P+QV  ++    PQQA+     ++A+QA Q   A +A
Sbjct: 664 PSVQQSQPPQQVQQVQHAQPPQQAQKAPQAQQAQQAQQAQQAPQA 708

>UVRB_FUSNN (Q8RGR2) UvrABC system protein B (Protein uvrB) (Excinuclease ABC|
           subunit B)
          Length = 663

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 17/56 (30%), Positives = 33/56 (58%)
 Frame = +3

Query: 180 DQIVNLNYMLAKSRVKSRPSVLWCYRNKLEISSHRKKRAKQIKKLMQRGLMDPEKA 347
           + ++NL+Y + + + ++   V   +RNK +I     K  K+IKKL++   +D E+A
Sbjct: 596 EDLINLDYGIEEKKFENDKKV---FRNKTDIEKEITKLEKKIKKLVEE--LDFEQA 646

>NAB2_YEAST (P32505) Nuclear polyadenylated RNA-binding protein NAB2|
          Length = 525

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +2

Query: 182 PDRQPQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQADQ 307
           P +QPQ    Q P+Q         PQQ   QQPQ++ +Q  Q
Sbjct: 124 PQQQPQQQPQQQPQQQ--------PQQQPQQQPQQQPQQQPQ 157

>DPOG1_RAT (Q9QYV8) DNA polymerase gamma subunit 1 (EC 2.7.7.7) (Mitochondrial|
           DNA polymerase catalytic subunit) (PolG-alpha)
          Length = 1216

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
 Frame = +3

Query: 99  ERIRTLIENGVRQRQRSMFIIVGDKSRDQIVN-LNYMLAKSRVKSRPSVLWCYRNKLEIS 275
           ER  T  ++   + QR M      KS  ++ N    +L+  R K  P   W +  + ++ 
Sbjct: 424 ERYLTEAQSTYEELQREM-----KKSLMELANDACQLLSGERYKEDP---WLWDLEWDLQ 475

Query: 276 SHRKKRAKQIKKLMQRGLMDPEKADPFSLFLETSD 380
             ++K+AK++KK      +  E A PF   ++  D
Sbjct: 476 EFKQKKAKKVKKTASASKLPIEGAGPFGDPMDQED 510

>HRS_DROME (Q960X8) Hepatocyte growth factor-regulated tyrosine kinase|
           substrate
          Length = 760

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = +2

Query: 182 PDRQPQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQADQ 307
           P +QPQ   GQ P+Q+   +    PQQ   QQPQ+   Q  Q
Sbjct: 658 PGQQPQQIPGQQPQQIPGQQ----PQQIPGQQPQQIPVQQPQ 695


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,006,739
Number of Sequences: 219361
Number of extensions: 615835
Number of successful extensions: 2284
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2270
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)