ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bastl31a02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF534907.1| Triticum aestivum sucrose-phosphate synthase 9 mRNA, complete cds Length = 3339 Score = 394 bits (199), Expect = e-107 Identities = 211/215 (98%) Strand = Plus / Plus Query: 112 cggcgtcgaagatggtgggcaacgacaactggatcaacagctacctcgacgccatcctcg 171 ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 96 cggcggcgaagatggtgggcaacgacaactggatcaacagctacctggacgccatcctcg 155 Query: 172 acgccggcaagtcggccatcggcggcgaccgcccctccctgctcctccgcgagcgtggcc 231 ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 156 acgccggcaagtcggccgtcggcggcgaccgcccctccttgctcctccgcgagcgtggcc 215 Query: 232 acttctccccggcccgctacttcgtcgaggaggtcatcaccggctacgacgagaccgacc 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 acttctccccggcccgctacttcgtcgaggaggtcatcaccggctacgacgagaccgacc 275 Query: 292 tctacaagacatggctccgggcgaacgcgatgcgg 326 ||||||||||||||||||||||||||||||||||| Sbjct: 276 tctacaagacatggctccgggcgaacgcgatgcgg 310 Score = 61.9 bits (31), Expect = 1e-06 Identities = 50/55 (90%), Gaps = 1/55 (1%) Strand = Plus / Plus Query: 8 ctcacttcctcctccgcccc-catccctcttttggcttaccctccactcctccca 61 ||||||||||||||| |||| | |||||||||||||||| ||||||||| ||||| Sbjct: 1 ctcacttcctcctcctccccacctccctcttttggcttagcctccactcttccca 55
>ref|XM_464358.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3259 Score = 309 bits (156), Expect = 3e-81 Identities = 192/204 (94%) Strand = Plus / Plus Query: 123 atggtgggcaacgacaactggatcaacagctacctcgacgccatcctcgacgccggcaag 182 |||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 99 atggcgggcaacgacaactggataaacagttacctcgacgccatcctcgacgccggcaag 158 Query: 183 tcggccatcggcggcgaccgcccctccctgctcctccgcgagcgtggccacttctccccg 242 |||| |||||||||||||||||||| || |||||||| ||||| ||||||||||||||| Sbjct: 159 gcggcaatcggcggcgaccgcccctcgctcctcctccgggagcgcggccacttctccccg 218 Query: 243 gcccgctacttcgtcgaggaggtcatcaccggctacgacgagaccgacctctacaagaca 302 || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 219 gcgcgctacttcgtcgaggaggtcatcaccgggtacgacgagaccgacctctacaagaca 278 Query: 303 tggctccgggcgaacgcgatgcgg 326 |||||||| ||||||||||||||| Sbjct: 279 tggctccgcgcgaacgcgatgcgg 302
>ref|XM_506735.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1572_F02.13 mRNA Length = 3327 Score = 309 bits (156), Expect = 3e-81 Identities = 192/204 (94%) Strand = Plus / Plus Query: 123 atggtgggcaacgacaactggatcaacagctacctcgacgccatcctcgacgccggcaag 182 |||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 127 atggcgggcaacgacaactggataaacagttacctcgacgccatcctcgacgccggcaag 186 Query: 183 tcggccatcggcggcgaccgcccctccctgctcctccgcgagcgtggccacttctccccg 242 |||| |||||||||||||||||||| || |||||||| ||||| ||||||||||||||| Sbjct: 187 gcggcaatcggcggcgaccgcccctcgctcctcctccgggagcgcggccacttctccccg 246 Query: 243 gcccgctacttcgtcgaggaggtcatcaccggctacgacgagaccgacctctacaagaca 302 || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 247 gcgcgctacttcgtcgaggaggtcatcaccgggtacgacgagaccgacctctacaagaca 306 Query: 303 tggctccgggcgaacgcgatgcgg 326 |||||||| ||||||||||||||| Sbjct: 307 tggctccgcgcgaacgcgatgcgg 330
>ref|XM_506734.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1572_F02.13 mRNA Length = 3490 Score = 309 bits (156), Expect = 3e-81 Identities = 192/204 (94%) Strand = Plus / Plus Query: 123 atggtgggcaacgacaactggatcaacagctacctcgacgccatcctcgacgccggcaag 182 |||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 161 atggcgggcaacgacaactggataaacagttacctcgacgccatcctcgacgccggcaag 220 Query: 183 tcggccatcggcggcgaccgcccctccctgctcctccgcgagcgtggccacttctccccg 242 |||| |||||||||||||||||||| || |||||||| ||||| ||||||||||||||| Sbjct: 221 gcggcaatcggcggcgaccgcccctcgctcctcctccgggagcgcggccacttctccccg 280 Query: 243 gcccgctacttcgtcgaggaggtcatcaccggctacgacgagaccgacctctacaagaca 302 || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 281 gcgcgctacttcgtcgaggaggtcatcaccgggtacgacgagaccgacctctacaagaca 340 Query: 303 tggctccgggcgaacgcgatgcgg 326 |||||||| ||||||||||||||| Sbjct: 341 tggctccgcgcgaacgcgatgcgg 364
>dbj|AK121486.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150H16, full insert sequence Length = 3489 Score = 309 bits (156), Expect = 3e-81 Identities = 192/204 (94%) Strand = Plus / Plus Query: 123 atggtgggcaacgacaactggatcaacagctacctcgacgccatcctcgacgccggcaag 182 |||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 160 atggcgggcaacgacaactggataaacagttacctcgacgccatcctcgacgccggcaag 219 Query: 183 tcggccatcggcggcgaccgcccctccctgctcctccgcgagcgtggccacttctccccg 242 |||| |||||||||||||||||||| || |||||||| ||||| ||||||||||||||| Sbjct: 220 gcggcaatcggcggcgaccgcccctcgctcctcctccgggagcgcggccacttctccccg 279 Query: 243 gcccgctacttcgtcgaggaggtcatcaccggctacgacgagaccgacctctacaagaca 302 || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 280 gcgcgctacttcgtcgaggaggtcatcaccgggtacgacgagaccgacctctacaagaca 339 Query: 303 tggctccgggcgaacgcgatgcgg 326 |||||||| ||||||||||||||| Sbjct: 340 tggctccgcgcgaacgcgatgcgg 363
>dbj|AK098898.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002B04, full insert sequence Length = 3259 Score = 309 bits (156), Expect = 3e-81 Identities = 192/204 (94%) Strand = Plus / Plus Query: 123 atggtgggcaacgacaactggatcaacagctacctcgacgccatcctcgacgccggcaag 182 |||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 99 atggcgggcaacgacaactggataaacagttacctcgacgccatcctcgacgccggcaag 158 Query: 183 tcggccatcggcggcgaccgcccctccctgctcctccgcgagcgtggccacttctccccg 242 |||| |||||||||||||||||||| || |||||||| ||||| ||||||||||||||| Sbjct: 159 gcggcaatcggcggcgaccgcccctcgctcctcctccgggagcgcggccacttctccccg 218 Query: 243 gcccgctacttcgtcgaggaggtcatcaccggctacgacgagaccgacctctacaagaca 302 || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 219 gcgcgctacttcgtcgaggaggtcatcaccgggtacgacgagaccgacctctacaagaca 278 Query: 303 tggctccgggcgaacgcgatgcgg 326 |||||||| ||||||||||||||| Sbjct: 279 tggctccgcgcgaacgcgatgcgg 302
>dbj|AK065273.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002L08, full insert sequence Length = 3326 Score = 309 bits (156), Expect = 3e-81 Identities = 192/204 (94%) Strand = Plus / Plus Query: 123 atggtgggcaacgacaactggatcaacagctacctcgacgccatcctcgacgccggcaag 182 |||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 126 atggcgggcaacgacaactggataaacagttacctcgacgccatcctcgacgccggcaag 185 Query: 183 tcggccatcggcggcgaccgcccctccctgctcctccgcgagcgtggccacttctccccg 242 |||| |||||||||||||||||||| || |||||||| ||||| ||||||||||||||| Sbjct: 186 gcggcaatcggcggcgaccgcccctcgctcctcctccgggagcgcggccacttctccccg 245 Query: 243 gcccgctacttcgtcgaggaggtcatcaccggctacgacgagaccgacctctacaagaca 302 || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 246 gcgcgctacttcgtcgaggaggtcatcaccgggtacgacgagaccgacctctacaagaca 305 Query: 303 tggctccgggcgaacgcgatgcgg 326 |||||||| ||||||||||||||| Sbjct: 306 tggctccgcgcgaacgcgatgcgg 329
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 285 bits (144), Expect = 4e-74 Identities = 177/188 (94%) Strand = Plus / Plus Query: 123 atggtgggcaacgacaactggatcaacagctacctcgacgccatcctcgacgccggcaag 182 |||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 4708648 atggcgggcaacgacaactggataaacagttacctcgacgccatcctcgacgccggcaag 4708707 Query: 183 tcggccatcggcggcgaccgcccctccctgctcctccgcgagcgtggccacttctccccg 242 |||| |||||||||||||||||||| || |||||||| ||||| ||||||||||||||| Sbjct: 4708708 gcggcaatcggcggcgaccgcccctcgctcctcctccgggagcgcggccacttctccccg 4708767 Query: 243 gcccgctacttcgtcgaggaggtcatcaccggctacgacgagaccgacctctacaagaca 302 || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 4708768 gcgcgctacttcgtcgaggaggtcatcaccgggtacgacgagaccgacctctacaagaca 4708827 Query: 303 tggctccg 310 |||||||| Sbjct: 4708828 tggctccg 4708835 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 ggccgctgcggctgctgctcg 113 ||||||||||||||||||||| Sbjct: 11302464 ggccgctgcggctgctgctcg 11302444 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 tcgccggcgcgcggcggccg 97 |||||||||||||||||||| Sbjct: 26405115 tcgccggcgcgcggcggccg 26405096
>dbj|AP004066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1572_F02 Length = 93626 Score = 285 bits (144), Expect = 4e-74 Identities = 177/188 (94%) Strand = Plus / Plus Query: 123 atggtgggcaacgacaactggatcaacagctacctcgacgccatcctcgacgccggcaag 182 |||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 80720 atggcgggcaacgacaactggataaacagttacctcgacgccatcctcgacgccggcaag 80779 Query: 183 tcggccatcggcggcgaccgcccctccctgctcctccgcgagcgtggccacttctccccg 242 |||| |||||||||||||||||||| || |||||||| ||||| ||||||||||||||| Sbjct: 80780 gcggcaatcggcggcgaccgcccctcgctcctcctccgggagcgcggccacttctccccg 80839 Query: 243 gcccgctacttcgtcgaggaggtcatcaccggctacgacgagaccgacctctacaagaca 302 || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 80840 gcgcgctacttcgtcgaggaggtcatcaccgggtacgacgagaccgacctctacaagaca 80899 Query: 303 tggctccg 310 |||||||| Sbjct: 80900 tggctccg 80907
>dbj|AB001338.1| Saccharum officinarum SoSPS2 premature mRNA for sucrose-phosphate synthase, complete cds Length = 3287 Score = 256 bits (129), Expect = 4e-65 Identities = 186/205 (90%) Strand = Plus / Plus Query: 122 gatggtgggcaacgacaactggatcaacagctacctcgacgccatcctcgacgccggcaa 181 ||||| ||||||||||||||||||||||||||||||||||| |||||| || ||||| || Sbjct: 37 gatggcgggcaacgacaactggatcaacagctacctcgacggcatcctagatgccggaaa 96 Query: 182 gtcggccatcggcggcgaccgcccctccctgctcctccgcgagcgtggccacttctcccc 241 | | ||||||||||| |||| |||||||| |||||||||||||| ||||| |||||||| Sbjct: 97 ggccgccatcggcgggaaccggccctccctcctcctccgcgagcgcggccatttctcccc 156 Query: 242 ggcccgctacttcgtcgaggaggtcatcaccggctacgacgagaccgacctctacaagac 301 || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 157 cgcgcgctacttcgtcgaggaggtcatcaccgggtacgacgagaccgacctctacaagac 216 Query: 302 atggctccgggcgaacgcgatgcgg 326 |||||| || |||||||| |||||| Sbjct: 217 atggctacgcgcgaacgccatgcgg 241
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 176 bits (89), Expect = 3e-41 Identities = 107/113 (94%) Strand = Plus / Minus Query: 198 gaccgcccctccctgctcctccgcgagcgtggccacttctccccggcccgctacttcgtc 257 ||||||||||| || |||||||||||||| |||||||||||||| || || ||||||||| Sbjct: 25866503 gaccgcccctcgctcctcctccgcgagcgcggccacttctcccccgcgcggtacttcgtc 25866444 Query: 258 gaggaggtcatcaccggctacgacgagaccgacctctacaagacatggctccg 310 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25866443 gaggaggtcatcaccggctacgacgagaccgacctctacaagacatggctccg 25866391 Score = 91.7 bits (46), Expect = 1e-15 Identities = 52/54 (96%) Strand = Plus / Minus Query: 129 ggcaacgacaactggatcaacagctacctcgacgccatcctcgacgccggcaag 182 ||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 25866611 ggcaacgacaactggatcaacagctacctggatgccatcctcgacgccggcaag 25866558 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ccatcctcgacgccggcaag 182 |||||||||||||||||||| Sbjct: 662974 ccatcctcgacgccggcaag 662993
>dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0017B12 Length = 157424 Score = 176 bits (89), Expect = 3e-41 Identities = 107/113 (94%) Strand = Plus / Minus Query: 198 gaccgcccctccctgctcctccgcgagcgtggccacttctccccggcccgctacttcgtc 257 ||||||||||| || |||||||||||||| |||||||||||||| || || ||||||||| Sbjct: 21601 gaccgcccctcgctcctcctccgcgagcgcggccacttctcccccgcgcggtacttcgtc 21542 Query: 258 gaggaggtcatcaccggctacgacgagaccgacctctacaagacatggctccg 310 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21541 gaggaggtcatcaccggctacgacgagaccgacctctacaagacatggctccg 21489 Score = 91.7 bits (46), Expect = 1e-15 Identities = 52/54 (96%) Strand = Plus / Minus Query: 129 ggcaacgacaactggatcaacagctacctcgacgccatcctcgacgccggcaag 182 ||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 21709 ggcaacgacaactggatcaacagctacctggatgccatcctcgacgccggcaag 21656
>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0416A11 Length = 171519 Score = 176 bits (89), Expect = 3e-41 Identities = 107/113 (94%) Strand = Plus / Minus Query: 198 gaccgcccctccctgctcctccgcgagcgtggccacttctccccggcccgctacttcgtc 257 ||||||||||| || |||||||||||||| |||||||||||||| || || ||||||||| Sbjct: 148707 gaccgcccctcgctcctcctccgcgagcgcggccacttctcccccgcgcggtacttcgtc 148648 Query: 258 gaggaggtcatcaccggctacgacgagaccgacctctacaagacatggctccg 310 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148647 gaggaggtcatcaccggctacgacgagaccgacctctacaagacatggctccg 148595 Score = 91.7 bits (46), Expect = 1e-15 Identities = 52/54 (96%) Strand = Plus / Minus Query: 129 ggcaacgacaactggatcaacagctacctcgacgccatcctcgacgccggcaag 182 ||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 148815 ggcaacgacaactggatcaacagctacctggatgccatcctcgacgccggcaag 148762
>gb|AY445835.1| Bambusa oldhamii sucrose-phosphate synthase mRNA, complete cds Length = 3225 Score = 95.6 bits (48), Expect = 8e-17 Identities = 84/96 (87%) Strand = Plus / Plus Query: 216 ctccgcgagcgtggccacttctccccggcccgctacttcgtcgaggaggtcatcaccggc 275 ||||||||||| |||| ||| ||| || |||||||||||||||||||||||| ||||| Sbjct: 151 ctccgcgagcgcggccggttcagccccgcgcgctacttcgtcgaggaggtcatctccggc 210 Query: 276 tacgacgagaccgacctctacaagacatggctccgg 311 | |||||||||||| ||||||||||| ||| ||||| Sbjct: 211 ttcgacgagaccgatctctacaagacctgggtccgg 246 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 139 actggatcaacagctacctcgacgccatcctcgacgc 175 ||||||||||||||||||| || |||||||||||||| Sbjct: 14 actggatcaacagctacctggaggccatcctcgacgc 50
>gb|U59489.1|MAU59489 Musa acuminata sucrose-phosphate synthase mRNA, partial sequence Length = 1505 Score = 93.7 bits (47), Expect = 3e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 243 gcccgctacttcgtcgaggaggtcatcaccggctacgacgagaccgacctctacaagac 301 |||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 112 gcccgctacttcgtggaggaggtcatcaccggctacgacgagactgatctctacaagac 170 Score = 40.1 bits (20), Expect = 4.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 139 actggatcaacagctacctcgacgccatcctcgacgccgg 178 |||||||||||||||| || || || ||||| |||||||| Sbjct: 11 actggatcaacagctatctggaggcgatcctggacgccgg 50
>dbj|AB232784.1| Lolium perenne LpSPS gene for sucrose phosphate synthase, complete cds Length = 3231 Score = 91.7 bits (46), Expect = 1e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 216 ctccgcgagcgtggccacttctccccggcccgctacttcgtcgaggaggtcatcaccggc 275 ||||||||||| |||| ||| ||| || |||||||||||||||||||||||| ||||| Sbjct: 151 ctccgcgagcgcggccggttcagccccgcgcgctacttcgtcgaggaggtcatctccggc 210 Query: 276 tacgacgagaccgacctctacaagac 301 | |||||||||||| ||||||||||| Sbjct: 211 ttcgacgagaccgatctctacaagac 236 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 139 actggatcaacagctacctcgacgccatcctcgacgc 175 ||||||||||||||||||| || |||||||||||||| Sbjct: 14 actggatcaacagctacctggaggccatcctcgacgc 50
>gb|AY109435.1| Zea mays CL790_1 mRNA sequence Length = 3577 Score = 91.7 bits (46), Expect = 1e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 249 tacttcgtcgaggaggtcatcaccggctacgacgagaccgacctctacaagacatggctc 308 ||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| || Sbjct: 272 tacttcgtcgaggaggtcatctccggcttcgacgagaccgacctctacaagacctgggtc 331 Query: 309 cg 310 || Sbjct: 332 cg 333
>ref|XM_481429.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3201 Score = 89.7 bits (45), Expect = 5e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 246 cgctacttcgtcgaggaggtcatcaccggctacgacgagaccgacctctacaagacatgg 305 |||||||||||||||||||||||| |||| | |||||||||||||||||||||||| ||| Sbjct: 175 cgctacttcgtcgaggaggtcatctccgggttcgacgagaccgacctctacaagacctgg 234 Query: 306 ctccg 310 |||| Sbjct: 235 gtccg 239 Score = 50.1 bits (25), Expect = 0.004 Identities = 34/37 (91%) Strand = Plus / Plus Query: 139 actggatcaacagctacctcgacgccatcctcgacgc 175 ||||||||||||||||||| || || ||||||||||| Sbjct: 14 actggatcaacagctacctggaggcgatcctcgacgc 50
>gb|AY360393.2| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0096K16, complete sequence Length = 164501 Score = 89.7 bits (45), Expect = 5e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 246 cgctacttcgtcgaggaggtcatcaccggctacgacgagaccgacctctacaagacatgg 305 |||||||||||||||||||||||| |||| | |||||||||||||||||||||||| ||| Sbjct: 74379 cgctacttcgtcgaggaggtcatctccgggttcgacgagaccgacctctacaagacctgg 74438 Query: 306 ctccg 310 |||| Sbjct: 74439 gtccg 74443 Score = 50.1 bits (25), Expect = 0.004 Identities = 34/37 (91%) Strand = Plus / Plus Query: 139 actggatcaacagctacctcgacgccatcctcgacgc 175 ||||||||||||||||||| || || ||||||||||| Sbjct: 74218 actggatcaacagctacctggaggcgatcctcgacgc 74254
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 89.7 bits (45), Expect = 5e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 246 cgctacttcgtcgaggaggtcatcaccggctacgacgagaccgacctctacaagacatgg 305 |||||||||||||||||||||||| |||| | |||||||||||||||||||||||| ||| Sbjct: 12405064 cgctacttcgtcgaggaggtcatctccgggttcgacgagaccgacctctacaagacctgg 12405123 Query: 306 ctccg 310 |||| Sbjct: 12405124 gtccg 12405128 Score = 50.1 bits (25), Expect = 0.004 Identities = 34/37 (91%) Strand = Plus / Plus Query: 139 actggatcaacagctacctcgacgccatcctcgacgc 175 ||||||||||||||||||| || || ||||||||||| Sbjct: 12404903 actggatcaacagctacctggaggcgatcctcgacgc 12404939
>dbj|AP004041.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1115_A07 Length = 165126 Score = 89.7 bits (45), Expect = 5e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 246 cgctacttcgtcgaggaggtcatcaccggctacgacgagaccgacctctacaagacatgg 305 |||||||||||||||||||||||| |||| | |||||||||||||||||||||||| ||| Sbjct: 9093 cgctacttcgtcgaggaggtcatctccgggttcgacgagaccgacctctacaagacctgg 9152 Query: 306 ctccg 310 |||| Sbjct: 9153 gtccg 9157 Score = 50.1 bits (25), Expect = 0.004 Identities = 34/37 (91%) Strand = Plus / Plus Query: 139 actggatcaacagctacctcgacgccatcctcgacgc 175 ||||||||||||||||||| || || ||||||||||| Sbjct: 8932 actggatcaacagctacctggaggcgatcctcgacgc 8968
>dbj|AK101676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058F14, full insert sequence Length = 3858 Score = 89.7 bits (45), Expect = 5e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 246 cgctacttcgtcgaggaggtcatcaccggctacgacgagaccgacctctacaagacatgg 305 |||||||||||||||||||||||| |||| | |||||||||||||||||||||||| ||| Sbjct: 370 cgctacttcgtcgaggaggtcatctccgggttcgacgagaccgacctctacaagacctgg 429 Query: 306 ctccg 310 |||| Sbjct: 430 gtccg 434 Score = 50.1 bits (25), Expect = 0.004 Identities = 34/37 (91%) Strand = Plus / Plus Query: 139 actggatcaacagctacctcgacgccatcctcgacgc 175 ||||||||||||||||||| || || ||||||||||| Sbjct: 209 actggatcaacagctacctggaggcgatcctcgacgc 245
>gb|AF439861.1|AF439861 Ipomoea batatas sucrose-phosphate synthase mRNA, complete cds Length = 3147 Score = 67.9 bits (34), Expect = 2e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 244 cccgctacttcgtcgaggaggtcatcaccggctacgacgagaccga 289 ||||||||||||||||||| ||||||||||||| ||| |||||||| Sbjct: 116 cccgctacttcgtcgaggaagtcatcaccggcttcgatgagaccga 161
>gb|AY007199.1| Ipomoea batatas sucrose phosphate synthase mRNA, partial cds Length = 678 Score = 67.9 bits (34), Expect = 2e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 244 cccgctacttcgtcgaggaggtcatcaccggctacgacgagaccga 289 ||||||||||||||||||| ||||||||||||| ||| |||||||| Sbjct: 116 cccgctacttcgtcgaggaagtcatcaccggcttcgatgagaccga 161
>ref|XM_960698.1| Neurospora crassa OR74A hypothetical protein (NCU00651.1) partial mRNA Length = 1149 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 90 ggcggccgctgcggctgctgctcgg 114 ||||||||||||||||||||||||| Sbjct: 987 ggcggccgctgcggctgctgctcgg 1011
>ref|XM_324830.1| Neurospora crassa OR74A hypothetical protein (NCU00651.1) partial mRNA Length = 1149 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 90 ggcggccgctgcggctgctgctcgg 114 ||||||||||||||||||||||||| Sbjct: 987 ggcggccgctgcggctgctgctcgg 1011
>emb|AL591143.11| Mouse DNA sequence from clone RP23-210L24 on chromosome 11 Contains the 5' end of the Abr gene for active BCR-related protein, a ribosomal protein L18 (Rpl18) pseudogene, a ribosomal protein L36 (Rpl36) pseudogene and four CpG islands, complete sequence Length = 212940 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Minus Query: 83 ggcgcgcggcggccgctgcggctgctgct 111 ||||||||||||||||||| ||||||||| Sbjct: 50345 ggcgcgcggcggccgctgccgctgctgct 50317
>dbj|AK153615.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630021H07 product:active BCR-related gene, full insert sequence Length = 2430 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Plus Query: 83 ggcgcgcggcggccgctgcggctgctgct 111 ||||||||||||||||||| ||||||||| Sbjct: 954 ggcgcgcggcggccgctgccgctgctgct 982
>dbj|AK052216.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330009I23 product:active BCR-related gene, full insert sequence Length = 2394 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Plus Query: 83 ggcgcgcggcggccgctgcggctgctgct 111 ||||||||||||||||||| ||||||||| Sbjct: 503 ggcgcgcggcggccgctgccgctgctgct 531
>dbj|AK044797.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130001P19 product:unclassifiable, full insert sequence Length = 2009 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Plus Query: 83 ggcgcgcggcggccgctgcggctgctgct 111 ||||||||||||||||||| ||||||||| Sbjct: 482 ggcgcgcggcggccgctgccgctgctgct 510
>dbj|AB005023.1| Citrus unshiu mRNA for sucrose-phosphate synthase, complete cds Length = 3539 Score = 50.1 bits (25), Expect = 0.004 Identities = 37/41 (90%) Strand = Plus / Plus Query: 249 tacttcgtcgaggaggtcatcaccggctacgacgagaccga 289 |||||||||||||| ||||||||||| | ||| |||||||| Sbjct: 146 tacttcgtcgaggaagtcatcaccggattcgatgagaccga 186
>ref|XM_471008.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 849 Score = 48.1 bits (24), Expect = 0.018 Identities = 27/28 (96%) Strand = Plus / Plus Query: 86 gcgcggcggccgctgcggctgctgctcg 113 ||||||| |||||||||||||||||||| Sbjct: 4 gcgcggcagccgctgcggctgctgctcg 31
>ref|XM_654755.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2243.2), mRNA Length = 1254 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Plus Query: 88 gcggcggccgctgcggctgctgct 111 |||||||||||||||||||||||| Sbjct: 1222 gcggcggccgctgcggctgctgct 1245
>emb|AL606642.3|OSJN00073 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H06, complete sequence Length = 143730 Score = 48.1 bits (24), Expect = 0.018 Identities = 27/28 (96%) Strand = Plus / Plus Query: 86 gcgcggcggccgctgcggctgctgctcg 113 ||||||| |||||||||||||||||||| Sbjct: 131687 gcgcggcagccgctgcggctgctgctcg 131714
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 48.1 bits (24), Expect = 0.018 Identities = 27/28 (96%) Strand = Plus / Plus Query: 86 gcgcggcggccgctgcggctgctgctcg 113 ||||||| |||||||||||||||||||| Sbjct: 600720 gcgcggcagccgctgcggctgctgctcg 600747
>gb|AE005001.1| Halobacterium sp. NRC-1 section 32 of 170 of the complete genome Length = 10670 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 159 gacgccatcctcgacgccggcaag 182 |||||||||||||||||||||||| Sbjct: 1296 gacgccatcctcgacgccggcaag 1273
>emb|AL442118.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0201G08, complete sequence Length = 121821 Score = 48.1 bits (24), Expect = 0.018 Identities = 27/28 (96%) Strand = Plus / Plus Query: 86 gcgcggcggccgctgcggctgctgctcg 113 ||||||| |||||||||||||||||||| Sbjct: 75919 gcgcggcagccgctgcggctgctgctcg 75946
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 94 gccgctgcggctgctgctcggcgtcg 119 ||||||||||||||||||||| |||| Sbjct: 852082 gccgctgcggctgctgctcggggtcg 852107 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 tcgacgccggcaagtcggccatcg 192 |||||||||||||||||| ||||| Sbjct: 3094711 tcgacgccggcaagtcggtcatcg 3094688
>emb|BX322588.8| Zebrafish DNA sequence from clone DKEYP-55C8 in linkage group 2, complete sequence Length = 192641 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 14 tcctcctccgcccccatccctc 35 |||||||||||||||||||||| Sbjct: 150904 tcctcctccgcccccatccctc 150925
>emb|BX322607.6| Zebrafish DNA sequence from clone DKEYP-20F6 in linkage group 2, complete sequence Length = 167493 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 14 tcctcctccgcccccatccctc 35 |||||||||||||||||||||| Sbjct: 142269 tcctcctccgcccccatccctc 142290
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 176 cggcaagtcggccatcggcggc 197 |||||||||||||||||||||| Sbjct: 1218877 cggcaagtcggccatcggcggc 1218856
>gb|AC166984.7| Mus musculus chromosome 15, clone RP24-359A11, complete sequence Length = 167492 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 cgcccccatccctcttttggc 42 ||||||||||||||||||||| Sbjct: 131622 cgcccccatccctcttttggc 131642
>ref|NM_189437.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2859 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 88 gcggcggccgctgcggctgctgctcggcgtcga 120 |||||||| || |||||||||||||||| |||| Sbjct: 1337 gcggcggcagcggcggctgctgctcggcctcga 1369
>ref|NM_004540.2| Homo sapiens neural cell adhesion molecule 2 (NCAM2), mRNA Length = 3699 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 cgcggcggccgctgcggctgctgct 111 ||||||||||||||| ||||||||| Sbjct: 9 cgcggcggccgctgctgctgctgct 33
>gb|AC118249.11| Mus musculus chromosome 19, clone RP23-397G23, complete sequence Length = 224129 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 cggcggccgctgcggctgctg 109 ||||||||||||||||||||| Sbjct: 66098 cggcggccgctgcggctgctg 66118
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 tcctcacttcctcctccgccc 26 ||||||||||||||||||||| Sbjct: 26660708 tcctcacttcctcctccgccc 26660728
>ref|XM_808790.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053511553.150) partial mRNA Length = 1092 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 gcggccgctgcggctgctgct 111 ||||||||||||||||||||| Sbjct: 1054 gcggccgctgcggctgctgct 1074
>gb|AC124363.3| Mus musculus BAC clone RP24-531A9 from chromosome 12, complete sequence Length = 134858 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 gcgcgcggcggccgctgcggc 104 ||||||||||||||||||||| Sbjct: 98776 gcgcgcggcggccgctgcggc 98796
>gb|AC159897.2| Mus musculus BAC clone RP23-191E14 from chromosome 12, complete sequence Length = 216485 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 gcgcgcggcggccgctgcggc 104 ||||||||||||||||||||| Sbjct: 52706 gcgcgcggcggccgctgcggc 52686
>gb|AC087116.13| Mus Musculus Strain C57BL6/J Chromosome 15~RP23-336B1, complete sequence Length = 218476 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 cgcccccatccctcttttggc 42 ||||||||||||||||||||| Sbjct: 178321 cgcccccatccctcttttggc 178301
>dbj|AK149860.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530023P03 product:sphingosine-1-phosphate phosphatase 1, full insert sequence Length = 2362 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 gcgcgcggcggccgctgcggc 104 ||||||||||||||||||||| Sbjct: 40 gcgcgcggcggccgctgcggc 60
>dbj|AK043586.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830010K07 product:sphingosine-1-phosphate phosphatase 1, full insert sequence Length = 3198 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 gcgcgcggcggccgctgcggc 104 ||||||||||||||||||||| Sbjct: 7 gcgcgcggcggccgctgcggc 27
>gb|AC084406.7|AC084406 Oryza sativa chromosome 3 BAC OSJNBa0067E01 genomic sequence, complete sequence Length = 140044 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 tcctcacttcctcctccgccc 26 ||||||||||||||||||||| Sbjct: 97132 tcctcacttcctcctccgccc 97112
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 tcctcacttcctcctccgccc 26 ||||||||||||||||||||| Sbjct: 26752031 tcctcacttcctcctccgccc 26752051
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 88 gcggcggccgctgcggctgctgctcggcgtcga 120 |||||||| || |||||||||||||||| |||| Sbjct: 42749876 gcggcggcagcggcggctgctgctcggcctcga 42749844
>dbj|AP003448.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1656_A11 Length = 148887 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 88 gcggcggccgctgcggctgctgctcggcgtcga 120 |||||||| || |||||||||||||||| |||| Sbjct: 82641 gcggcggcagcggcggctgctgctcggcctcga 82609
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 158 cgacgccatcctcgacgccggcaag 182 |||||| |||||||||||||||||| Sbjct: 4194814 cgacgcgatcctcgacgccggcaag 4194838
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 gacgccatcctcgacgccggc 179 ||||||||||||||||||||| Sbjct: 1199537 gacgccatcctcgacgccggc 1199557
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 gacgccatcctcgacgccggc 179 ||||||||||||||||||||| Sbjct: 6378074 gacgccatcctcgacgccggc 6378094
>dbj|AP005414.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073G17 Length = 162391 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 ggccgctgcggctgctgctcg 113 ||||||||||||||||||||| Sbjct: 105279 ggccgctgcggctgctgctcg 105259
>dbj|AK120238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044A21, full insert sequence Length = 3285 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 tcctcacttcctcctccgccc 26 ||||||||||||||||||||| Sbjct: 12 tcctcacttcctcctccgccc 32
>emb|AJ332149.1|HSA332149 Homo sapiens genomic sequence surrounding NotI site, clone NL1-VB13RS Length = 826 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 cgcggcggccgctgcggctgctgct 111 ||||||||| ||||||||||||||| Sbjct: 172 cgcggcggcggctgcggctgctgct 196
>dbj|AK068703.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159A12, full insert sequence Length = 3033 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 tcctcacttcctcctccgccc 26 ||||||||||||||||||||| Sbjct: 17 tcctcacttcctcctccgccc 37
>dbj|AK065235.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H20, full insert sequence Length = 3301 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 tcctcacttcctcctccgccc 26 ||||||||||||||||||||| Sbjct: 23 tcctcacttcctcctccgccc 43
>dbj|AK064949.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000P20, full insert sequence Length = 2224 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 tcctcacttcctcctccgccc 26 ||||||||||||||||||||| Sbjct: 17 tcctcacttcctcctccgccc 37
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 cagctacctcgacgccatcct 169 ||||||||||||||||||||| Sbjct: 2708525 cagctacctcgacgccatcct 2708505
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 gccgctgcggctgctgctcgg 114 ||||||||||||||||||||| Sbjct: 3355342 gccgctgcggctgctgctcgg 3355362 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 264 gtcatcaccggctacgacgagacc 287 |||||||||||||||| ||||||| Sbjct: 2304091 gtcatcaccggctacggcgagacc 2304114
>gb|BC052946.1| Homo sapiens neural cell adhesion molecule 2, mRNA (cDNA clone MGC:51008 IMAGE:5315109), complete cds Length = 3619 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 cgcggcggccgctgcggctgctgct 111 ||||||||||||||| ||||||||| Sbjct: 9 cgcggcggccgctgctgctgctgct 33
>gb|U81318.1|TAU81318 Triticum aestivum poly(A)-binding protein (wheatpab) mRNA, complete cds Length = 2237 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 cgcggcggccgctgcggctgc 107 ||||||||||||||||||||| Sbjct: 111 cgcggcggccgctgcggctgc 131
>dbj|AP001138.3| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, LL56-APP region, clone:B880L11, complete sequence Length = 163969 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 cgcggcggccgctgcggctgctgct 111 ||||||||||||||| ||||||||| Sbjct: 18679 cgcggcggccgctgctgctgctgct 18703
>ref|NM_185396.2| Oryza sativa (japonica cultivar-group), mRNA Length = 3968 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 ccatcctcgacgccggcaag 182 |||||||||||||||||||| Sbjct: 999 ccatcctcgacgccggcaag 980
>ref|XM_467100.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1137 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 tcgccggcgcgcggcggccg 97 |||||||||||||||||||| Sbjct: 123 tcgccggcgcgcggcggccg 104
>ref|NM_032520.3| Homo sapiens N-acetylglucosamine-1-phosphate transferase, gamma subunit (GNPTG), mRNA Length = 1228 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cgcgcggcggccgctgcggc 104 |||||||||||||||||||| Sbjct: 13 cgcgcggcggccgctgcggc 32
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 gcggctgctgctcggcgtcg 119 |||||||||||||||||||| Sbjct: 1776385 gcggctgctgctcggcgtcg 1776404 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 ggctgctgctcggcgtcgaa 121 |||||||||||||||||||| Sbjct: 744941 ggctgctgctcggcgtcgaa 744922
>ref|NM_001030716.1| Gallus gallus DPH1 homolog (S. cerevisiae) (DPH1), mRNA Length = 2758 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 ggcggccgctgcggctgctg 109 |||||||||||||||||||| Sbjct: 1718 ggcggccgctgcggctgctg 1737
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 agctacctcgacgccatcct 169 |||||||||||||||||||| Sbjct: 2850558 agctacctcgacgccatcct 2850539
>gb|AC104200.12| Mus musculus chromosome 13, clone RP24-512M2, complete sequence Length = 171912 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 cttcctcctccgcccccatccctc 35 ||||||||||| |||||||||||| Sbjct: 95107 cttcctcctcctcccccatccctc 95084
>gb|AY350714.1| Olimarabidopsis pumila clone BAC Op37I22, complete sequence Length = 84869 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 gacctctacaagacatggctccgg 311 ||||||| |||||||||||||||| Sbjct: 18590 gacctctgcaagacatggctccgg 18567
>ref|XM_851355.1| PREDICTED: Canis familiaris similar to NOL1/NOP2/Sun domain family 2 protein, transcript variant 3 (LOC478625), mRNA Length = 2950 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 84 gcgcgcggcggccgctgcggctgctgct 111 |||||| ||||||||||| ||||||||| Sbjct: 62 gcgcgctgcggccgctgctgctgctgct 35
>ref|XM_535800.2| PREDICTED: Canis familiaris similar to NOL1/NOP2/Sun domain family 2 protein, transcript variant 1 (LOC478625), mRNA Length = 2965 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 84 gcgcgcggcggccgctgcggctgctgct 111 |||||| ||||||||||| ||||||||| Sbjct: 62 gcgcgctgcggccgctgctgctgctgct 35
>ref|XM_543739.2| PREDICTED: Canis familiaris similar to plakophilin 2 isoform 2a, transcript variant 1 (LOC486613), mRNA Length = 2543 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 ggccgctgcggctgctgctc 112 |||||||||||||||||||| Sbjct: 177 ggccgctgcggctgctgctc 158
>ref|XM_533925.2| PREDICTED: Canis familiaris similar to 8D6 antigen (LOC476721), mRNA Length = 1078 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cgctgcggctgctgctcggc 115 |||||||||||||||||||| Sbjct: 62 cgctgcggctgctgctcggc 81
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 cgacgccatcctcgacgccg 177 |||||||||||||||||||| Sbjct: 2737095 cgacgccatcctcgacgccg 2737076
>ref|XM_750114.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g08730) partial mRNA Length = 1377 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 gccgctgcggctgctgctcg 113 |||||||||||||||||||| Sbjct: 1102 gccgctgcggctgctgctcg 1121
>ref|XM_539052.2| PREDICTED: Canis familiaris similar to POU domain, class 3, transcription factor 2 (LOC481931), mRNA Length = 2241 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 gcggcggccgctgcggctgctgct 111 |||||||||||||| ||||||||| Sbjct: 1042 gcggcggccgctgctgctgctgct 1019
>gb|AC133211.3| Mus musculus BAC clone RP23-36M18 from chromosome 12, complete sequence Length = 238126 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 atttctcctcacttcctcct 20 |||||||||||||||||||| Sbjct: 198969 atttctcctcacttcctcct 198950
>gb|AC004941.2| Homo sapiens PAC clone RP5-979P20 from 7, complete sequence Length = 122759 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gcggcggccgctgcggctgctgct 111 |||||||| ||||||||||||||| Sbjct: 23286 gcggcggcggctgcggctgctgct 23309
>emb|X59772.1|DMOVO D.melanogaster ovo gene required for female germ line development Length = 6655 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gcggcggccgctgcggctgctgct 111 |||||||||||||| ||||||||| Sbjct: 3663 gcggcggccgctgctgctgctgct 3686
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 tcgccggcgcgcggcggccg 97 |||||||||||||||||||| Sbjct: 1191457 tcgccggcgcgcggcggccg 1191476
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 cgctgcggctgctgctcggcgtcg 119 |||||| ||||||||||||||||| Sbjct: 3972331 cgctgccgctgctgctcggcgtcg 3972308
>gb|AY331261.1| Viscum album subsp. album sucrose phosphate synthase mRNA, complete cds Length = 3123 Score = 40.1 bits (20), Expect = 4.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 249 tacttcgtcgaggaggtcatcaccggctacgacgagaccgacct 292 |||||||| |||||||||||||| || | ||| || |||||||| Sbjct: 121 tacttcgtggaggaggtcatcactggattcgatgaaaccgacct 164
>emb|AL031709.12|HS316G12 Human DNA sequence from clone LA16c-316G12 on chromosome 16 Contains the gene for C2 domain protein KIAA0734, the gene for a novel protein similar to predicted yeast, worm and archae-bacterial proteins, a novel gene and the 3' part of the gene for a novel protein similar to API1 and API2 (apoptosis inhibitor 1 and 2 (MIHB, MIHC, IAP1, IAP2)). Contains ESTs, a GSS and six putative CpG islands, complete sequence Length = 37476 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cgcgcggcggccgctgcggc 104 |||||||||||||||||||| Sbjct: 20014 cgcgcggcggccgctgcggc 20033
>gb|BC014592.1| Homo sapiens N-acetylglucosamine-1-phosphate transferase, gamma subunit, mRNA (cDNA clone MGC:26282 IMAGE:4824054), complete cds Length = 1220 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cgcgcggcggccgctgcggc 104 |||||||||||||||||||| Sbjct: 8 cgcgcggcggccgctgcggc 27
>emb|BX572596.1| Rhodopseudomonas palustris CGA009 complete genome; segment 4/16 Length = 348942 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 tcgaggaggtcatcaccggctacg 279 |||| ||||||||||||||||||| Sbjct: 240116 tcgacgaggtcatcaccggctacg 240139
>emb|BX294152.1| Pirellula sp. strain 1 complete genome; segment 20/24 Length = 304250 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 gctgcggctgctgctcggcgtcga 120 |||||||||||||||| ||||||| Sbjct: 125559 gctgcggctgctgctcagcgtcga 125582
>emb|AJ430589.1|DME430589 Drosophila melanogaster partial mRNA for ovoA protein (ovo gene) Length = 3669 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gcggcggccgctgcggctgctgct 111 |||||||||||||| ||||||||| Sbjct: 2617 gcggcggccgctgctgctgctgct 2640
>emb|AJ430588.1|DME430588 Drosophila melanogaster mRNA for shavenbaby (svb gene) Length = 5505 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gcggcggccgctgcggctgctgct 111 |||||||||||||| ||||||||| Sbjct: 3848 gcggcggccgctgctgctgctgct 3871
>gb|AC132213.1| Drosophila pseudoobscura FOSMID DPSF1-548A8 (Children's Hospital Oakland Research Institute Drosophila pseudoobscura FOSMID Library) complete sequence Length = 38490 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gcggcggccgctgcggctgctgct 111 |||||||| ||||||||||||||| Sbjct: 10677 gcggcggcggctgcggctgctgct 10700
>emb|AJ721005.1| Gallus gallus mRNA for hypothetical protein, clone 32d16 Length = 2758 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 ggcggccgctgcggctgctg 109 |||||||||||||||||||| Sbjct: 1718 ggcggccgctgcggctgctg 1737
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 agctacctcgacgccatcct 169 |||||||||||||||||||| Sbjct: 4240061 agctacctcgacgccatcct 4240080
>gb|AE006467.1| Homo sapiens 16p13.3 sequence section 6 of 8 Length = 279011 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cgcgcggcggccgctgcggc 104 |||||||||||||||||||| Sbjct: 21846 cgcgcggcggccgctgcggc 21865
>dbj|AK220172.1| Mus musculus mRNA for mKIAA4046 protein Length = 5605 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gcggcggccgctgcggctgctgct 111 ||||||||||| |||||||||||| Sbjct: 2 gcggcggccgcggcggctgctgct 25
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 gcggctgctgctcggcgtcg 119 |||||||||||||||||||| Sbjct: 2916554 gcggctgctgctcggcgtcg 2916573
>gb|AY119649.1| Drosophila melanogaster RE46053 full insert cDNA Length = 4721 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gcggcggccgctgcggctgctgct 111 |||||||||||||| ||||||||| Sbjct: 2520 gcggcggccgctgctgctgctgct 2543
>gb|AC023686.4| Drosophila melanogaster X BAC RP98-30C1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170626 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gcggcggccgctgcggctgctgct 111 |||||||||||||| ||||||||| Sbjct: 131059 gcggcggccgctgctgctgctgct 131082
>ref|NM_167027.2| Drosophila melanogaster ovo CG6824-RC, transcript variant C (ovo), mRNA Length = 4282 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gcggcggccgctgcggctgctgct 111 |||||||||||||| ||||||||| Sbjct: 2626 gcggcggccgctgctgctgctgct 2649
>ref|NM_167026.2| Drosophila melanogaster ovo CG6824-RB, transcript variant B (ovo), mRNA Length = 5503 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gcggcggccgctgcggctgctgct 111 |||||||||||||| ||||||||| Sbjct: 3847 gcggcggccgctgctgctgctgct 3870
>gb|AY094838.1| Drosophila melanogaster LD47350 full insert cDNA Length = 5514 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gcggcggccgctgcggctgctgct 111 |||||||||||||| ||||||||| Sbjct: 3847 gcggcggccgctgctgctgctgct 3870
>ref|NM_080338.3| Drosophila melanogaster ovo CG6824-RA, transcript variant A (ovo), mRNA Length = 4710 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gcggcggccgctgcggctgctgct 111 |||||||||||||| ||||||||| Sbjct: 2520 gcggcggccgctgctgctgctgct 2543
>gb|U11383.1|DMU11383 Drosophila melanogaster Ovo-1028aa (ovo) mRNA, complete cds Length = 5023 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gcggcggccgctgcggctgctgct 111 |||||||||||||| ||||||||| Sbjct: 2670 gcggcggccgctgctgctgctgct 2693
>ref|NM_001038742.1| Drosophila melanogaster ovo CG6824-RD, transcript variant D (ovo), mRNA Length = 5021 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gcggcggccgctgcggctgctgct 111 |||||||||||||| ||||||||| Sbjct: 2679 gcggcggccgctgctgctgctgct 2702
>gb|AF434666.1|AF434666 Petromyzon marinus Hox4w (hox4w) mRNA, partial cds Length = 816 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cgcggcggccgctgcggctgctgc 110 ||||||||| |||||||||||||| Sbjct: 240 cgcggcggcggctgcggctgctgc 263
>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome Length = 2679306 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 cgacgccatcctcgacgccg 177 |||||||||||||||||||| Sbjct: 1701422 cgacgccatcctcgacgccg 1701403
>dbj|AK154116.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630002L06 product:sphingosine-1-phosphate phosphatase 1, full insert sequence Length = 2964 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cgcgcggcggccgctgcggc 104 |||||||||||||||||||| Sbjct: 3 cgcgcggcggccgctgcggc 22
>emb|CR388839.1| Gallus gallus finished cDNA, clone ChEST196e16 Length = 625 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cggccgctgcggctgctgct 111 |||||||||||||||||||| Sbjct: 525 cggccgctgcggctgctgct 544
>gb|AF051400.1|AF051400 Gallus gallus fibulin-1, isoform C precursor (FBLN1) mRNA, complete cds Length = 2358 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cggccgctgcggctgctgct 111 |||||||||||||||||||| Sbjct: 232 cggccgctgcggctgctgct 251
>gb|AF051399.1|AF051399 Gallus gallus fibulin-1, isoform D precursor (FBLN1) mRNA, complete cds Length = 3346 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cggccgctgcggctgctgct 111 |||||||||||||||||||| Sbjct: 232 cggccgctgcggctgctgct 251
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 tcgtcgaggaggtcatcaccggct 276 ||||||| |||||||||||||||| Sbjct: 1682232 tcgtcgacgaggtcatcaccggct 1682209
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cgccggcgcgcggcggccgc 98 |||||||||||||||||||| Sbjct: 45119 cgccggcgcgcggcggccgc 45138
>tpg|BK000090.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) cellulose synthase-like D2 gene, complete cds Length = 5000 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 ccatcctcgacgccggcaag 182 |||||||||||||||||||| Sbjct: 1094 ccatcctcgacgccggcaag 1075
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 tcgacgccatcctcgacgcc 176 |||||||||||||||||||| Sbjct: 3730994 tcgacgccatcctcgacgcc 3731013
>gb|AC008126.9|AC008126 Homo sapiens 12 BAC RPCI11-90E9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 173545 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 tcctcctccgcccccatccc 33 |||||||||||||||||||| Sbjct: 74137 tcctcctccgcccccatccc 74118
>gb|AF318949.1| Actinidia chinensis sucrose phosphate synthase (SPS2) mRNA, complete cds Length = 3627 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 246 cgctacttcgtcgaggaggtcatc 269 ||||||||||||||| |||||||| Sbjct: 200 cgctacttcgtcgagcaggtcatc 223
>gb|AC127002.3| Homo sapiens 12 BAC RP11-15J22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 128829 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 gcggcggccgctgcggctgctgct 111 ||||||||||| |||||||||||| Sbjct: 3432 gcggcggccgcggcggctgctgct 3409
>gb|AC129569.17| Mus musculus chromosome 5, clone RP23-121M13, complete sequence Length = 199799 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gcggcggccgctgcggctgctgct 111 ||||||||||| |||||||||||| Sbjct: 35059 gcggcggccgcggcggctgctgct 35082
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 cgacgagaccgacctctaca 297 |||||||||||||||||||| Sbjct: 3667646 cgacgagaccgacctctaca 3667627
>ref|NM_204165.1| Gallus gallus fibulin 1 (FBLN1), mRNA Length = 3346 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cggccgctgcggctgctgct 111 |||||||||||||||||||| Sbjct: 232 cggccgctgcggctgctgct 251
>gb|AC007021.3|AC007021 Homo sapiens PAC clone RP6-155F9 from Xq23, complete sequence Length = 122674 Score = 40.1 bits (20), Expect = 4.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 81 ccggcgcgcggcggccgctgcggctgctgctc 112 ||||| |||||||||||| || |||||||||| Sbjct: 91146 ccggcccgcggcggccgcggccgctgctgctc 91177
>ref|XM_228713.3| PREDICTED: Rattus norvegicus similar to cofactor required for Sp1 transcriptional activation, subunit 2, 150kDa (LOC317343), mRNA Length = 5042 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gcggcggccgctgcggctgctgct 111 |||||||| ||||||||||||||| Sbjct: 250 gcggcggcagctgcggctgctgct 273
>ref|XM_573819.1| PREDICTED: Rattus norvegicus similar to Transforming growth factor beta 1 induced transcript 4, isoform 1 (LOC498545), mRNA Length = 6586 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 gcggcggccgctgcggctgctgct 111 |||||||| ||||||||||||||| Sbjct: 1580 gcggcggctgctgcggctgctgct 1557
>dbj|AP004676.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_B06 Length = 131956 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 tcgccggcgcgcggcggccg 97 |||||||||||||||||||| Sbjct: 5031 tcgccggcgcgcggcggccg 5012
>dbj|AP001552.1| Oryza sativa (japonica cultivar-group) geneomic DNA, chromosome 6, PAC clone:P0029D06 Length = 150120 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ccatcctcgacgccggcaag 182 |||||||||||||||||||| Sbjct: 69402 ccatcctcgacgccggcaag 69421
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 acctcgacgccatcctcgacgccg 177 |||||||||||| ||||||||||| Sbjct: 1600416 acctcgacgccaccctcgacgccg 1600439
>dbj|AP003017.1| Mesorhizobium loti MAFF303099 plasmid pMLb DNA, complete genome Length = 208315 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 tcgacgccatcctcgacgccggca 180 |||||||||||||||| ||||||| Sbjct: 72754 tcgacgccatcctcgaggccggca 72777
>gb|AC155646.4| Mus musculus 6 BAC RP24-195P20 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 169883 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ttctcctcacttcctcctcc 22 |||||||||||||||||||| Sbjct: 110320 ttctcctcacttcctcctcc 110301
>ref|XM_309180.2| Anopheles gambiae str. PEST ENSANGP00000005374 (ENSANGG00000004140), partial mRNA Length = 3297 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gcggcggccgctgcggctgctgct 111 ||||||||||||||||| |||||| Sbjct: 1063 gcggcggccgctgcggccgctgct 1086
>dbj|AK105393.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-B04, full insert sequence Length = 4089 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 ccatcctcgacgccggcaag 182 |||||||||||||||||||| Sbjct: 888 ccatcctcgacgccggcaag 869
>dbj|AK102134.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085F12, full insert sequence Length = 3968 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 ccatcctcgacgccggcaag 182 |||||||||||||||||||| Sbjct: 999 ccatcctcgacgccggcaag 980
>dbj|AK101814.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067A05, full insert sequence Length = 1137 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 tcgccggcgcgcggcggccg 97 |||||||||||||||||||| Sbjct: 123 tcgccggcgcgcggcggccg 104
>emb|AJ490184.1|MCA490184 Microsporum canis mep1 gene for metalloprotease (MEP1), exons 1-5 Length = 2172 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 gacgccatcctcgacgccggcaag 182 ||||||||||||||||||| |||| Sbjct: 2020 gacgccatcctcgacgccgacaag 2043
>gb|AE003433.3| Drosophila melanogaster chromosome X, section 17 of 74 of the complete sequence Length = 303602 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gcggcggccgctgcggctgctgct 111 |||||||||||||| ||||||||| Sbjct: 47379 gcggcggccgctgctgctgctgct 47402
>gb|AY664417.1| Zea mays cultivar Mo17 locus 9002, complete sequence Length = 366120 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 ctcgccggcgcgcggcggcc 96 |||||||||||||||||||| Sbjct: 244494 ctcgccggcgcgcggcggcc 244475 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 ctcgccggcgcgcggcggcc 96 |||||||||||||||||||| Sbjct: 235931 ctcgccggcgcgcggcggcc 235912
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 96 cgctgcggctgctgctcggcgtcgaaga 123 |||||| |||||||||||||| |||||| Sbjct: 748215 cgctgccgctgctgctcggcgccgaaga 748188
>gb|U85449.1|ADU85449 Actinidia deliciosa sucrose-phosphate synthase (KSPS-2) mRNA, partial cds Length = 1830 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 246 cgctacttcgtcgaggaggtcatc 269 ||||||||||||||| |||||||| Sbjct: 217 cgctacttcgtcgagcaggtcatc 240
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 tcgacgccatcctcgacgcc 176 |||||||||||||||||||| Sbjct: 3730968 tcgacgccatcctcgacgcc 3730987
>emb|AL713933.6|CNS07YPE Oryza sativa chromosome 12, . BAC OJ1041_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104421 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 tcgacgccatcctcgacgcc 176 |||||||||||||||||||| Sbjct: 18679 tcgacgccatcctcgacgcc 18660
>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2 Length = 339972 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 tcgccggcgcgcggcggccg 97 |||||||||||||||||||| Sbjct: 127127 tcgccggcgcgcggcggccg 127108
>gb|U22357.1|DPU22357 Drosophila pseudoobscura runt gene, complete cds Length = 3875 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 gcggcggccgctgcggctgc 107 |||||||||||||||||||| Sbjct: 3243 gcggcggccgctgcggctgc 3224 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,593,132 Number of Sequences: 3902068 Number of extensions: 2593132 Number of successful extensions: 74288 Number of sequences better than 10.0: 148 Number of HSP's better than 10.0 without gapping: 151 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 69796 Number of HSP's gapped (non-prelim): 4491 length of query: 326 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 304 effective length of database: 17,147,199,772 effective search space: 5212748730688 effective search space used: 5212748730688 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
