>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)|
Length = 870
Score = 102 bits (253), Expect(3) = 4e-45
Identities = 44/54 (81%), Positives = 51/54 (94%)
Frame = +3
Query: 303 GVPGAIIVKNNHASEFFLKTITLDNVPGRGTIVFVANSWVYPQAKYRHNRVFFA 464
G+PGAIIVKNNHA+EFFLKTITLDNVPG G +VFVANSW+YP +KYR+NRVFF+
Sbjct: 105 GIPGAIIVKNNHAAEFFLKTITLDNVPGHGAVVFVANSWIYPASKYRYNRVFFS 158
Score = 77.4 bits (189), Expect(3) = 4e-45
Identities = 37/52 (71%), Positives = 44/52 (84%)
Frame = +2
Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTC 229
+GGI+ LTG + A LKGS+VLMRKNALD NDFGATV+DG++E LGRGVTC
Sbjct: 2 LGGIIGGLTGN-KNARLKGSLVLMRKNALDINDFGATVIDGISEFLGRGVTC 52
Score = 42.0 bits (97), Expect(3) = 4e-45
Identities = 16/25 (64%), Positives = 22/25 (88%)
Frame = +1
Query: 232 TNLPFITTGENKFAVTFDWSVDKLG 306
T+LP +TTGE+KF VTF+W V+K+G
Sbjct: 81 TSLPSLTTGESKFGVTFEWEVEKMG 105
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)|
Length = 866
Score = 92.0 bits (227), Expect(3) = 2e-41
Identities = 43/55 (78%), Positives = 51/55 (92%), Gaps = 1/55 (1%)
Frame = +3
Query: 303 GVPGAIIVKNNHASEFFLKTITLDNVPGR-GTIVFVANSWVYPQAKYRHNRVFFA 464
GVPGAIIVKN+H++EFFLKTITLD+VPGR G +VF+ANSWVYP KYR++RVFFA
Sbjct: 107 GVPGAIIVKNHHSNEFFLKTITLDDVPGRAGAVVFLANSWVYPADKYRYDRVFFA 161
Score = 73.9 bits (180), Expect(3) = 2e-41
Identities = 33/52 (63%), Positives = 42/52 (80%)
Frame = +2
Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTC 229
+GGI+ +TG + + LKG+VVLMRKN LD NDFGATV+DG+ E LG+GVTC
Sbjct: 2 LGGIIDTITGSSKQSRLKGTVVLMRKNVLDLNDFGATVIDGLGEFLGKGVTC 53
Score = 43.1 bits (100), Expect(3) = 2e-41
Identities = 17/25 (68%), Positives = 22/25 (88%)
Frame = +1
Query: 232 TNLPFITTGENKFAVTFDWSVDKLG 306
++LP +TTGE++F VTFDW VDKLG
Sbjct: 83 SSLPSLTTGESRFGVTFDWDVDKLG 107
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)|
Length = 862
Score = 84.0 bits (206), Expect(3) = 1e-39
Identities = 39/55 (70%), Positives = 46/55 (83%), Gaps = 1/55 (1%)
Frame = +3
Query: 303 GVPGAIIVKNNHASEFFLKTITLDNVPGR-GTIVFVANSWVYPQAKYRHNRVFFA 464
GVPGAI+V N H+SEF LKTITL +VPGR G + FVANSW+YP A YR++RVFFA
Sbjct: 107 GVPGAIVVNNYHSSEFLLKTITLHDVPGRSGNLTFVANSWIYPAANYRYSRVFFA 161
Score = 75.9 bits (185), Expect(3) = 1e-39
Identities = 33/52 (63%), Positives = 42/52 (80%)
Frame = +2
Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTC 229
+GG++ LTG + A LKG+VVLMRKN LD NDFGAT++DG+ E LG+GVTC
Sbjct: 3 LGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTC 54
Score = 43.1 bits (100), Expect(3) = 1e-39
Identities = 17/25 (68%), Positives = 22/25 (88%)
Frame = +1
Query: 232 TNLPFITTGENKFAVTFDWSVDKLG 306
T+LP +TTGE+KF +TFDW V+KLG
Sbjct: 83 TSLPSLTTGESKFGLTFDWEVEKLG 107
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)|
Length = 863
Score = 89.4 bits (220), Expect(3) = 2e-28
Identities = 39/54 (72%), Positives = 48/54 (88%)
Frame = +3
Query: 303 GVPGAIIVKNNHASEFFLKTITLDNVPGRGTIVFVANSWVYPQAKYRHNRVFFA 464
GVPGAII+KN+H+++FFLKTITL +VPG TIVFVANSW+YP KY +NR+FFA
Sbjct: 105 GVPGAIIIKNHHSTKFFLKTITLHDVPGCDTIVFVANSWIYPVGKYHYNRIFFA 158
Score = 43.5 bits (101), Expect(3) = 2e-28
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +2
Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTC 229
+GG+ LTG G +KG VLM + LD DF A+++D V E+ G +TC
Sbjct: 2 LGGLKDKLTGK-NGNKIKGLAVLMSRKLLDPRDFTASLLDNVHEVFGNSITC 52
Score = 32.0 bits (71), Expect(3) = 2e-28
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 232 TNLPFITTGENKFAVTFDWSVDKLG 306
T+LP ++ GE+K V F+W +DK G
Sbjct: 81 TDLPSVSQGESKLTVRFNWEMDKHG 105
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)|
Length = 859
Score = 76.6 bits (187), Expect(3) = 6e-27
Identities = 33/54 (61%), Positives = 43/54 (79%)
Frame = +3
Query: 303 GVPGAIIVKNNHASEFFLKTITLDNVPGRGTIVFVANSWVYPQAKYRHNRVFFA 464
GVPGA I+KN H +EFFLK++TL++VP G I FV NSWVYP +Y+ +R+FFA
Sbjct: 105 GVPGAFIIKNLHLNEFFLKSLTLEDVPNYGKIHFVCNSWVYPAFRYKSDRIFFA 158
Score = 50.8 bits (120), Expect(3) = 6e-27
Identities = 24/51 (47%), Positives = 37/51 (72%)
Frame = +2
Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVT 226
+GGIV + G +KG V+LM+KN LDF + GA+V+DG+++LLG+ V+
Sbjct: 3 LGGIVDAILGKDDRPKVKGRVILMKKNVLDFINIGASVVDGISDLLGQKVS 53
Score = 32.3 bits (72), Expect(3) = 6e-27
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 232 TNLPFITTGENKFAVTFDWSVDKLG 306
T++ IT GE+ F+VTFDW D+ G
Sbjct: 81 TDITPITAGESTFSVTFDWDRDEFG 105
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)|
Length = 860
Score = 77.4 bits (189), Expect(3) = 2e-23
Identities = 31/54 (57%), Positives = 43/54 (79%)
Frame = +3
Query: 303 GVPGAIIVKNNHASEFFLKTITLDNVPGRGTIVFVANSWVYPQAKYRHNRVFFA 464
GVPGA ++KN H +EFFLK++TL++VP G + FV NSWVYP +Y+ +R+FFA
Sbjct: 106 GVPGAFVIKNMHINEFFLKSLTLEDVPNHGKVHFVCNSWVYPSFRYKSDRIFFA 159
Score = 46.2 bits (108), Expect(3) = 2e-23
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 5/53 (9%)
Frame = +2
Query: 83 IVSDLTGGLRGAH-----LKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVT 226
++ L GGL G H +KG+VV+M+KNALDF D ++ D + E LG+ V+
Sbjct: 1 MLGQLVGGLIGGHHDSKKVKGTVVMMKKNALDFTDLAGSLTDKIFEALGQKVS 53
Score = 24.3 bits (51), Expect(3) = 2e-23
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 247 ITTGENKFAVTFDWS 291
+ GE F VTFDW+
Sbjct: 88 LAAGETAFGVTFDWN 102
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)|
Length = 859
Score = 70.5 bits (171), Expect(3) = 6e-22
Identities = 27/54 (50%), Positives = 41/54 (75%)
Frame = +3
Query: 303 GVPGAIIVKNNHASEFFLKTITLDNVPGRGTIVFVANSWVYPQAKYRHNRVFFA 464
G PGA +++N+H SEF LK++TL++VPG G + ++ NSW+YP Y +RVFF+
Sbjct: 108 GYPGAFLIRNSHFSEFLLKSLTLEDVPGHGRVHYICNSWIYPAKHYTTDRVFFS 161
Score = 46.2 bits (108), Expect(3) = 6e-22
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Frame = +2
Query: 95 LTGG---LRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVT 226
LTGG +KG+VVLM+KN LDFNDF A+ +D + E LG +T
Sbjct: 9 LTGGGNETTTKKVKGTVVLMKKNVLDFNDFNASFLDRLHEFLGNKIT 55
Score = 26.2 bits (56), Expect(3) = 6e-22
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 232 TNLPFITTGENKFAVTFDWSVD 297
T + +T GE+ F VTFD+ D
Sbjct: 85 TTITSLTAGESAFKVTFDYETD 106
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)|
Length = 861
Score = 77.4 bits (189), Expect(3) = 2e-21
Identities = 32/54 (59%), Positives = 42/54 (77%)
Frame = +3
Query: 303 GVPGAIIVKNNHASEFFLKTITLDNVPGRGTIVFVANSWVYPQAKYRHNRVFFA 464
GVPGA I+KN H +EFFLK++TL++VP G + FV NSWVYP Y+ +R+FFA
Sbjct: 107 GVPGAFIIKNMHINEFFLKSLTLEDVPNHGKVHFVCNSWVYPSLNYKSDRIFFA 160
Score = 40.4 bits (93), Expect(3) = 2e-21
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Frame = +2
Query: 83 IVSDLTGGLRGAH-----LKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVT 226
++ +T GL G H +KG+VV+M KN LDF D ++ + ++LG+ V+
Sbjct: 1 MIGQITSGLFGGHDDSKKVKGTVVMMNKNVLDFTDLAGSLTGKIFDVLGQKVS 53
Score = 23.1 bits (48), Expect(3) = 2e-21
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +1
Query: 232 TNLPFITTGENKFAVTFDWS 291
T P E F VTFDW+
Sbjct: 84 TLTPLTAGSETAFGVTFDWN 103
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)|
Length = 864
Score = 67.8 bits (164), Expect(3) = 3e-17
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = +3
Query: 297 QAGVPGAIIVKNNHASEFFLKTITLDNVPGRGTIVFVANSWVYPQAKYRHNRVFFA 464
+ G+PGA +KN EFFLK++TL++VP GTI FV NSWVY Y+ R+FFA
Sbjct: 116 EMGIPGAFYIKNYMQVEFFLKSLTLEDVPNHGTIRFVCNSWVYNSKLYKSPRIFFA 171
Score = 37.0 bits (84), Expect(3) = 3e-17
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 19/64 (29%)
Frame = +2
Query: 92 DLTGGLRGAH-LKGSVVLMRKNALDFN--------------DFGATV----MDGVTELLG 214
++TG L H ++G+VVLMRKN LDFN D G + +DG+T LG
Sbjct: 4 NVTGLLNKGHKIRGTVVLMRKNVLDFNTIVSIGGGNVHGVIDSGINIIGSTLDGLTAFLG 63
Query: 215 RGVT 226
R V+
Sbjct: 64 RSVS 67
Score = 21.9 bits (45), Expect(3) = 3e-17
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 235 NLPFITTGENKFAVTFDW 288
+LP + GE+ F + F+W
Sbjct: 96 SLPTLGAGESAFNIHFEW 113
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)|
Length = 861
Score = 63.9 bits (154), Expect(3) = 2e-16
Identities = 26/54 (48%), Positives = 39/54 (72%)
Frame = +3
Query: 303 GVPGAIIVKNNHASEFFLKTITLDNVPGRGTIVFVANSWVYPQAKYRHNRVFFA 464
G+PGA +KN +EFFL ++TLD++P G+I FV NSW+Y ++ +R+FFA
Sbjct: 113 GIPGAFYIKNFMQTEFFLVSLTLDDIPNHGSIYFVCNSWIYNAKHHKIDRIFFA 166
Score = 37.4 bits (85), Expect(3) = 2e-16
Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 14/60 (23%)
Frame = +2
Query: 89 SDLTGGL-RGAHLKGSVVLMRKNALDFN-------------DFGATVMDGVTELLGRGVT 226
S +TG L RG +KG+VVLMRKN LD N D + +D +T LGR V+
Sbjct: 3 SGVTGILNRGHKIKGTVVLMRKNVLDINSLTTVGGVIGQGFDILGSTVDNLTAFLGRSVS 62
Score = 22.7 bits (47), Expect(3) = 2e-16
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +1
Query: 232 TNLPFITTGENKFAVTFDWSVD 297
++LP + G++ F + F+W D
Sbjct: 90 SSLPTLGAGQSAFKIHFEWDDD 111
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)|
Length = 839
Score = 64.3 bits (155), Expect(3) = 1e-15
Identities = 29/57 (50%), Positives = 38/57 (66%)
Frame = +3
Query: 294 GQAGVPGAIIVKNNHASEFFLKTITLDNVPGRGTIVFVANSWVYPQAKYRHNRVFFA 464
G G+PGA +KN EFFLK++TL+ + +GTI FV NSWVY Y+ R+FFA
Sbjct: 89 GSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFA 145
Score = 33.1 bits (74), Expect(3) = 1e-15
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = +2
Query: 113 GAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVT 226
G +KG+VVLM KN L+ N G+ V D + LGR V+
Sbjct: 5 GHKIKGTVVLMPKNELEVNPDGSAV-DNLNAFLGRSVS 41
Score = 23.9 bits (50), Expect(3) = 1e-15
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 232 TNLPFITTGENKFAVTFDW 288
T+LP + GE+ F + F+W
Sbjct: 69 TSLPTLGAGESAFNIHFEW 87
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)|
Length = 857
Score = 58.9 bits (141), Expect(3) = 2e-14
Identities = 24/55 (43%), Positives = 39/55 (70%)
Frame = +3
Query: 300 AGVPGAIIVKNNHASEFFLKTITLDNVPGRGTIVFVANSWVYPQAKYRHNRVFFA 464
+G+ GA +KN +EFFL ++TL+++P G+I FV NSW+Y ++ +R+FFA
Sbjct: 109 SGILGAFYIKNFMQTEFFLVSLTLEDIPNHGSIHFVCNSWIYNAKLFKSDRIFFA 163
Score = 33.9 bits (76), Expect(3) = 2e-14
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 15/59 (25%)
Frame = +2
Query: 95 LTGGL--RGAHLKGSVVLMRKNALDFN-------------DFGATVMDGVTELLGRGVT 226
+ GGL RG +KG+VVLMRKN L N D + +D +T LGR V+
Sbjct: 1 MLGGLLHRGHKIKGTVVLMRKNVLHVNSVTSVGGIIGQGLDLVGSTLDTLTAFLGRPVS 59
Score = 23.9 bits (50), Expect(3) = 2e-14
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +1
Query: 232 TNLPFITTGENKFAVTFDW 288
T+LP + G++ F + F+W
Sbjct: 87 TSLPTLGAGQSAFKINFEW 105
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)|
Length = 865
Score = 65.9 bits (159), Expect(2) = 1e-11
Identities = 29/54 (53%), Positives = 39/54 (72%)
Frame = +3
Query: 303 GVPGAIIVKNNHASEFFLKTITLDNVPGRGTIVFVANSWVYPQAKYRHNRVFFA 464
G+PGA +KN EF+LK++TL++VP +GTI FV NSWVY Y+ R+FFA
Sbjct: 122 GIPGAFYIKNYMQVEFYLKSLTLEDVPNQGTIRFVCNSWVYNTKLYKSVRIFFA 175
Score = 41.2 bits (95), Expect = 0.001
Identities = 25/54 (46%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 65 MFGVGGIVSDLTGGLRGAH-LKGSVVLMRKNALDFNDFGATVMDGVTELLGRGV 223
MF V G+ L G G H +KG+VVLMRKN LDFN V L+G G+
Sbjct: 1 MFSVPGVSGILNRG--GGHKIKGTVVLMRKNVLDFNSVADLTKGNVGGLIGTGL 52
Score = 22.3 bits (46), Expect(2) = 1e-11
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 235 NLPFITTGENKFAVTFDW 288
+LP + GE+ F + F+W
Sbjct: 100 SLPTLGAGESAFNIQFEW 117
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)|
Length = 866
Score = 60.1 bits (144), Expect = 3e-09
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Frame = +3
Query: 303 GVPGAIIVKN-NHASEFFLKTITLDNVPGRGTIVFVANSWVYPQAKYRHNRVFFA 464
G PGA ++N EFFL ++TLD+VP G+I F NSW+Y KY+ +R+FFA
Sbjct: 117 GTPGAFYIENFMQGGEFFLVSLTLDDVPNVGSIKFACNSWIYNDKKYQSDRIFFA 171
Score = 31.6 bits (70), Expect = 1.2
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 20/58 (34%)
Frame = +2
Query: 110 RGAHLKGSVVLMRKNALDFN--------------------DFGATVMDGVTELLGRGV 223
RG LKG+V+LM+KN LD N +++D T LGR V
Sbjct: 8 RGQKLKGTVILMQKNVLDINALTAAQSPSGIIGGAFGVVGSIAGSIIDTATAFLGRSV 65
>GLTB_MAIZE (P23225) Ferredoxin-dependent glutamate synthase, chloroplast|
precursor (EC 1.4.7.1) (Fd-GOGAT)
Length = 1616
Score = 28.5 bits (62), Expect = 9.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 115 APEAPRQVAHDAADAKHLRSISGECG 38
AP AP++ AAD H+ S G CG
Sbjct: 74 APPAPQKPTQQAADLNHILSERGACG 99
Database: uniprot_sprot.fasta
Posted date: May 25, 2006 5:36 PM
Number of letters in database: 80,573,946
Number of sequences in database: 219,361
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,786,612
Number of Sequences: 219361
Number of extensions: 677958
Number of successful extensions: 2547
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2541
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)