ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl30h10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds Length = 2910 Score = 476 bits (240), Expect = e-131 Identities = 260/264 (98%), Gaps = 2/264 (0%) Strand = Plus / Plus Query: 225 cctgccgacgaacctgccgttcatcaccaccggcgagaacaagttcgccgtcaccttcga 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 312 cctgccgacgaacctgccgttcatcaccaccggcgagaacaagttcgccgtcaccttcga 371 Query: 285 ctggtcggtggacaagctgggg-tgccgggcgccatcatcgtcaagaacaaccacgcctc 343 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 372 ctggtcggtggacaagctgggggtgccgggggccatcatcgtcaagaacaaccacgcctc 431 Query: 344 cgagttcttcctcaagaccatcaccctcgacaacgtgcccggccgcggcaccatcgtctt 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 432 cgagttcttcctcaagaccatcaccctcgacaacgtgcccggccgcggcaccatcgtctt 491 Query: 404 cgtcgccaactcatgggtctacccgcaggccaagtaccgccacaaccgcgtcttcttcgc 463 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 492 cgtcgccaactcatgggtctacccgcaggccaagtaccgctacaaccgcgtcttcttcgc 551 Query: 464 c-acgacacgtacctgccgcacca 486 | |||||||||||||||||||||| Sbjct: 552 caacgacacgtacctgccgcacca 575 Score = 345 bits (174), Expect = 8e-92 Identities = 220/230 (95%), Gaps = 4/230 (1%) Strand = Plus / Plus Query: 1 acacagcagcaccacagcgagctaacttagcaagcgtgccacactccccagagatcgagc 60 |||||||| |||| |||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 4 acacagca-caccgcagcgagctaacttag-aagcgtgccacactccc-agagatcgagc 60 Query: 61 gaagatgtttggcgtcggcggcatcgtgagcgacctgacggggggcctccggggcgccca 120 |||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 61 -aagatgcttggcgtcggcggcatcgtgagcgacttgacggggggcatccggggcgccca 119 Query: 121 cctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 cctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgc 179 Query: 181 caccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgcc 230 | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 ccacgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgcc 229
>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds Length = 2845 Score = 276 bits (139), Expect = 6e-71 Identities = 204/223 (91%), Gaps = 2/223 (0%) Strand = Plus / Plus Query: 257 gcgagaacaagttcgccgtcaccttcgactggtcggtggacaagctgggg-tgccgggcg 315 |||||||| ||||| |||||||||||||||| |||||| |||| ||| | ||||||| Sbjct: 290 gcgagaaccagttccgcgtcaccttcgactgggaggtggagaagcagggcatcccgggcg 349 Query: 316 ccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctcgaca 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 350 ccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctcaacg 409 Query: 376 acgtgcccggccgcggcaccatcgtcttcgtcgccaactcatgggtctacccgcaggcca 435 |||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 410 acgtccccggccacggcaccatcgtcttcgtcgccaactcatggatctacccgcagtcca 469 Query: 436 agtaccgccacaaccgcgtcttcttcgcc-acgacacgtacct 477 |||||||| ||||||||||||||||| || ||||||||||||| Sbjct: 470 agtaccgctacaaccgcgtcttcttctccaacgacacgtacct 512 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 202 cgagctcctcggccgcggcgtcacctgcc 230 |||| |||||||||||||||||||||||| Sbjct: 153 cgagttcctcggccgcggcgtcacctgcc 181
>gb|AF465642.1| Zea mays Golden cross bantam-70 lipoxygenase gene, promoter region and partial cds Length = 3196 Score = 240 bits (121), Expect = 4e-60 Identities = 188/209 (89%), Gaps = 1/209 (0%) Strand = Plus / Plus Query: 254 ccggcgagaacaagttcgccgtcaccttcgactggtcggtggacaagctggg-gtgccgg 312 |||||||| || ||||| |||||||||||||||| |||||| |||| || || |||| Sbjct: 2808 ccggcgaggaccagttccgcgtcaccttcgactgggaggtggagaagcacggcgtcccgg 2867 Query: 313 gcgccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctcg 372 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2868 gcgccatcatcgtgaagaacaaccacgcctccgagttcttcctcaagaccatcaccatcg 2927 Query: 373 acaacgtgcccggccgcggcaccatcgtcttcgtcgccaactcatgggtctacccgcagg 432 || |||| ||||||| |||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 2928 acgacgtccccggccacggccccatcgtcttcgtcgccaactcatgggtgtacccgcagt 2987 Query: 433 ccaagtaccgccacaaccgcgtcttcttc 461 |||||||||| ||||||||||||||||| Sbjct: 2988 acaagtaccgctacaaccgcgtcttcttc 3016 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 186 tcatggacggcgtcaccgagctcctcggccgcggcgtcacctgcc 230 ||||||||||| || |||| |||||||||||||||||||||||| Sbjct: 2387 tcatggacggcctcggcgagttcctcggccgcggcgtcacctgcc 2431
>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds Length = 2595 Score = 226 bits (114), Expect = 5e-56 Identities = 203/230 (88%), Gaps = 2/230 (0%) Strand = Plus / Plus Query: 253 accggcgagaacaagttcgccgtcaccttcgactggtcggtggacaagctggg-gtgccg 311 ||||||||| |||||||| |||||| ||||||||| |||||| |||||||| |||||| Sbjct: 265 accggcgagtccaagttcggcgtcacgttcgactgggaggtggagaagctgggagtgccg 324 Query: 312 ggcgccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctc 371 || ||| || |||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 325 ggggccgtcgtcgtcaagaacaaccacgccgccgagttcttcctcaagacaatcaccctc 384 Query: 372 gacaacgtgcccggccgcggcaccatcgtcttcgtcgccaactcatgggtctacccgcag 431 ||| ||||||||||||||||| || || ||||||||||||||| ||||||||||| | Sbjct: 385 gacgacgtgcccggccgcggcgccgtcaccttcgtcgccaactcctgggtctaccccgcg 444 Query: 432 gccaagtaccgccacaaccgcgtcttcttcgcc-acgacacgtacctgcc 480 | |||||||||| ||||||||||||||||| || |||| ||||||||||| Sbjct: 445 ggcaagtaccgctacaaccgcgtcttcttctccaacgatacgtacctgcc 494 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Plus Query: 122 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 181 ||||||||| | || || |||||||||||||||| ||| ||| ||||||||||||||||| Sbjct: 52 ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 111 Query: 182 accgtcatggacggcgtcaccgagctcctcggc 214 |||||| | ||| || ||| |||| |||||||| Sbjct: 112 accgtcgttgacagcatcagcgagttcctcggc 144
>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds Length = 5013 Score = 218 bits (110), Expect = 1e-53 Identities = 186/210 (88%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 253 accggcgagaacaagttcgccgtcaccttcgactggtcggtggacaagctggg-gtgccg 311 ||||||||| |||||||| |||||| ||||||||| |||||| |||||||| |||||| Sbjct: 993 accggcgagtccaagttcggcgtcacgttcgactgggaggtggagaagctgggagtgccg 1052 Query: 312 ggcgccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctc 371 || ||| || |||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 1053 ggggccgtcgtcgtcaagaacaaccacgccgccgagttcttcctcaagacaatcaccctc 1112 Query: 372 gacaacgtgcccggccgcggcaccatcgtcttcgtcgccaactcatgggtctacccgcag 431 ||| ||||||||||||||||| || || ||||||||||||||| ||||||||||| | Sbjct: 1113 gacgacgtgcccggccgcggcgccgtcaccttcgtcgccaactcctgggtctaccccgcg 1172 Query: 432 gccaagtaccgccacaaccgcgtcttcttc 461 | |||||||||| ||||||||||||||||| Sbjct: 1173 ggcaagtaccgctacaaccgcgtcttcttc 1202 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Plus Query: 122 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 181 ||||||||| | || || |||||||||||||||| ||| ||| ||||||||||||||||| Sbjct: 200 ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 259 Query: 182 accgtcatggacggcgtcaccgagctcctcggc 214 |||||| | ||| || ||| |||| |||||||| Sbjct: 260 accgtcgttgacagcatcagcgagttcctcggc 292
>gb|AF457968.1| Zea mays clone cho1c.pk002.j23, mRNA sequence Length = 515 Score = 194 bits (98), Expect = 2e-46 Identities = 159/178 (89%), Gaps = 1/178 (0%) Strand = Plus / Plus Query: 253 accggcgagaacaagttcgccgtcaccttcgactggtcggtggacaagctggg-gtgccg 311 ||||||||| |||||||| |||||| ||||||||| |||||| |||||||| |||||| Sbjct: 327 accggcgagtccaagttcggcgtcacgttcgactgggaggtggagaagctgggagtgccg 386 Query: 312 ggcgccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctc 371 || ||| || |||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 387 ggggccgtcgtcgtcaagaacaaccacgccgccgagttcttcctcaagacaatcaccctc 446 Query: 372 gacaacgtgcccggccgcggcaccatcgtcttcgtcgccaactcatgggtctacccgc 429 ||| ||||||||||||||||| || || ||||||||||||||| ||||||||||||| Sbjct: 447 gacgacgtgcccggccgcggcgccgtcaacttcgtcgccaactcctgggtctacccgc 504 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Plus Query: 122 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 181 ||||||||| | || || |||||||||||||||| ||| ||| ||||||||||||||||| Sbjct: 114 ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 173 Query: 182 accgtcatggacggcgtcaccgagctcctcggc 214 |||||| | ||| || ||| |||| |||||||| Sbjct: 174 accgtcgttgacagcatcagcgagttcctcggc 206
>ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2613 Score = 186 bits (94), Expect = 5e-44 Identities = 136/150 (90%) Strand = Plus / Plus Query: 312 ggcgccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctc 371 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 322 ggcgccatcatcgtcaagaacaaccacgccgccgagttcttcctcaagaccatcaccctc 381 Query: 372 gacaacgtgcccggccgcggcaccatcgtcttcgtcgccaactcatgggtctacccgcag 431 |||||||| ||||||| |||| || ||||||||||||||||||| ||| ||||||| Sbjct: 382 gacaacgtccccggccacggcgccgtcgtcttcgtcgccaactcctggatctaccccgcc 441 Query: 432 gccaagtaccgccacaaccgcgtcttcttc 461 ||||||| ||| ||||||||||||||||| Sbjct: 442 tccaagtatcgctacaaccgcgtcttcttc 471 Score = 167 bits (84), Expect = 4e-38 Identities = 108/116 (93%) Strand = Plus / Plus Query: 115 cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 174 ||||| ||||||||||||| |||||||||||||||||||||| |||||| |||||||||| Sbjct: 42 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 101 Query: 175 cggcgccaccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgcc 230 ||||||||||||||| |||||| || ||||| |||||||||||||||||||||||| Sbjct: 102 cggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacctgcc 157
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 186 bits (94), Expect = 5e-44 Identities = 136/150 (90%) Strand = Plus / Plus Query: 312 ggcgccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctc 371 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 30023659 ggcgccatcatcgtcaagaacaaccacgccgccgagttcttcctcaagaccatcaccctc 30023718 Query: 372 gacaacgtgcccggccgcggcaccatcgtcttcgtcgccaactcatgggtctacccgcag 431 |||||||| ||||||| |||| || ||||||||||||||||||| ||| ||||||| Sbjct: 30023719 gacaacgtccccggccacggcgccgtcgtcttcgtcgccaactcctggatctaccccgcc 30023778 Query: 432 gccaagtaccgccacaaccgcgtcttcttc 461 ||||||| ||| ||||||||||||||||| Sbjct: 30023779 tccaagtatcgctacaaccgcgtcttcttc 30023808 Score = 167 bits (84), Expect = 4e-38 Identities = 108/116 (93%) Strand = Plus / Plus Query: 115 cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 174 ||||| ||||||||||||| |||||||||||||||||||||| |||||| |||||||||| Sbjct: 30023301 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 30023360 Query: 175 cggcgccaccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgcc 230 ||||||||||||||| |||||| || ||||| |||||||||||||||||||||||| Sbjct: 30023361 cggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacctgcc 30023416 Score = 137 bits (69), Expect = 4e-29 Identities = 140/163 (85%), Gaps = 3/163 (1%) Strand = Plus / Plus Query: 306 gtgccgggcgccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatc 365 |||||||| |||||||||||||||||| ||||| | |||||||||||||||||||||| Sbjct: 27799425 gtgccgggggccatcatcgtcaagaaccaccacagcaacgagttcttcctcaagaccatc 27799484 Query: 366 accctcgacaacgtgcccggccg---cggcaccatcgtcttcgtcgccaactcatgggtc 422 ||||||||| |||| |||||||| |||| || |||||||| |||||||||| |||||| Sbjct: 27799485 accctcgacgacgtccccggccgcgccggcgccgtcgtcttcctcgccaactcctgggtc 27799544 Query: 423 tacccgcaggccaagtaccgccacaaccgcgtcttcttcgcca 465 ||||| | ||||||||| || |||||||||||||||||| Sbjct: 27799545 taccccgccgacaagtaccgttacgaccgcgtcttcttcgcca 27799587 Score = 97.6 bits (49), Expect = 3e-17 Identities = 94/109 (86%) Strand = Plus / Plus Query: 122 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 181 ||||||||| | || || |||||||||||||||| |||||| ||||||||||||||||| Sbjct: 27798757 ctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgcc 27798816 Query: 182 accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgcc 230 |||||||| |||||| || |||| |||||||| ||||||||||||| Sbjct: 27798817 accgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgcc 27798865 Score = 83.8 bits (42), Expect = 5e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 342 tccgagttcttcctcaagaccatcaccctcgacaacgtgcccggccgcggcaccatcgtc 401 |||||||||||||||||||| ||||||||||| ||| |||||| |||||| ||||| Sbjct: 27816818 tccgagttcttcctcaagacgctcaccctcgacggcgtccccggcaagggcaccgtcgtc 27816877 Query: 402 ttcgtcgccaactcatgggtctaccc 427 |||||||||||||| ||| ||||||| Sbjct: 27816878 ttcgtcgccaactcgtggatctaccc 27816903 Score = 63.9 bits (32), Expect = 5e-07 Identities = 69/80 (86%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 293 tggacaagc-tggggtgccgggcgccatcatcgtcaagaacaaccacgcctccgagttct 351 ||||||||| ||| ||||| || ||||||||| |||||||| ||||| || |||||| Sbjct: 27758793 tggacaagcatggtgtgccaggggccatcatcatcaagaaccaccacagtaccaagttct 27758852 Query: 352 tcctcaagaccatcaccctc 371 |||||||||||||||||||| Sbjct: 27758853 tcctcaagaccatcaccctc 27758872 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ggcgtcggcggcatcgtgag 90 |||||||||||||||||||| Sbjct: 24817033 ggcgtcggcggcatcgtgag 24817052
>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 Length = 2830 Score = 186 bits (94), Expect = 5e-44 Identities = 136/150 (90%) Strand = Plus / Plus Query: 312 ggcgccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctc 371 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 419 ggcgccatcatcgtcaagaacaaccacgccgccgagttcttcctcaagaccatcaccctc 478 Query: 372 gacaacgtgcccggccgcggcaccatcgtcttcgtcgccaactcatgggtctacccgcag 431 |||||||| ||||||| |||| || ||||||||||||||||||| ||| ||||||| Sbjct: 479 gacaacgtccccggccacggcgccgtcgtcttcgtcgccaactcctggatctaccccgcc 538 Query: 432 gccaagtaccgccacaaccgcgtcttcttc 461 ||||||| ||| ||||||||||||||||| Sbjct: 539 tccaagtatcgctacaaccgcgtcttcttc 568 Score = 151 bits (76), Expect = 3e-33 Identities = 106/116 (91%) Strand = Plus / Plus Query: 115 cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 174 ||||| ||||||||||||| |||||||||||||||||||||| |||||| |||||||||| Sbjct: 139 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 198 Query: 175 cggcgccaccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgcc 230 ||||||||||||||| || || || ||||| |||||||||||||||||||||||| Sbjct: 199 cggcgccaccgtcatcgagcgcatctccgagttcctcggccgcggcgtcacctgcc 254
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence Length = 155106 Score = 186 bits (94), Expect = 5e-44 Identities = 136/150 (90%) Strand = Plus / Minus Query: 312 ggcgccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctc 371 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 84092 ggcgccatcatcgtcaagaacaaccacgccgccgagttcttcctcaagaccatcaccctc 84033 Query: 372 gacaacgtgcccggccgcggcaccatcgtcttcgtcgccaactcatgggtctacccgcag 431 |||||||| ||||||| |||| || ||||||||||||||||||| ||| ||||||| Sbjct: 84032 gacaacgtccccggccacggcgccgtcgtcttcgtcgccaactcctggatctaccccgcc 83973 Query: 432 gccaagtaccgccacaaccgcgtcttcttc 461 ||||||| ||| ||||||||||||||||| Sbjct: 83972 tccaagtatcgctacaaccgcgtcttcttc 83943 Score = 167 bits (84), Expect = 4e-38 Identities = 108/116 (93%) Strand = Plus / Minus Query: 115 cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 174 ||||| ||||||||||||| |||||||||||||||||||||| |||||| |||||||||| Sbjct: 84450 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 84391 Query: 175 cggcgccaccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgcc 230 ||||||||||||||| |||||| || ||||| |||||||||||||||||||||||| Sbjct: 84390 cggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacctgcc 84335
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 186 bits (94), Expect = 5e-44 Identities = 136/150 (90%) Strand = Plus / Plus Query: 312 ggcgccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctc 371 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 30115081 ggcgccatcatcgtcaagaacaaccacgccgccgagttcttcctcaagaccatcaccctc 30115140 Query: 372 gacaacgtgcccggccgcggcaccatcgtcttcgtcgccaactcatgggtctacccgcag 431 |||||||| ||||||| |||| || ||||||||||||||||||| ||| ||||||| Sbjct: 30115141 gacaacgtccccggccacggcgccgtcgtcttcgtcgccaactcctggatctaccccgcc 30115200 Query: 432 gccaagtaccgccacaaccgcgtcttcttc 461 ||||||| ||| ||||||||||||||||| Sbjct: 30115201 tccaagtatcgctacaaccgcgtcttcttc 30115230 Score = 167 bits (84), Expect = 4e-38 Identities = 108/116 (93%) Strand = Plus / Plus Query: 115 cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 174 ||||| ||||||||||||| |||||||||||||||||||||| |||||| |||||||||| Sbjct: 30114723 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 30114782 Query: 175 cggcgccaccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgcc 230 ||||||||||||||| |||||| || ||||| |||||||||||||||||||||||| Sbjct: 30114783 cggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacctgcc 30114838 Score = 137 bits (69), Expect = 4e-29 Identities = 140/163 (85%), Gaps = 3/163 (1%) Strand = Plus / Plus Query: 306 gtgccgggcgccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatc 365 |||||||| |||||||||||||||||| ||||| | |||||||||||||||||||||| Sbjct: 27890749 gtgccgggggccatcatcgtcaagaaccaccacagcaacgagttcttcctcaagaccatc 27890808 Query: 366 accctcgacaacgtgcccggccg---cggcaccatcgtcttcgtcgccaactcatgggtc 422 ||||||||| |||| |||||||| |||| || |||||||| |||||||||| |||||| Sbjct: 27890809 accctcgacgacgtccccggccgcgccggcgccgtcgtcttcctcgccaactcctgggtc 27890868 Query: 423 tacccgcaggccaagtaccgccacaaccgcgtcttcttcgcca 465 ||||| | ||||||||| || |||||||||||||||||| Sbjct: 27890869 taccccgccgacaagtaccgttacgaccgcgtcttcttcgcca 27890911 Score = 97.6 bits (49), Expect = 3e-17 Identities = 94/109 (86%) Strand = Plus / Plus Query: 122 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 181 ||||||||| | || || |||||||||||||||| |||||| ||||||||||||||||| Sbjct: 27890081 ctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgcc 27890140 Query: 182 accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgcc 230 |||||||| |||||| || |||| |||||||| ||||||||||||| Sbjct: 27890141 accgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgcc 27890189 Score = 83.8 bits (42), Expect = 5e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 342 tccgagttcttcctcaagaccatcaccctcgacaacgtgcccggccgcggcaccatcgtc 401 |||||||||||||||||||| ||||||||||| ||| |||||| |||||| ||||| Sbjct: 27908142 tccgagttcttcctcaagacgctcaccctcgacggcgtccccggcaagggcaccgtcgtc 27908201 Query: 402 ttcgtcgccaactcatgggtctaccc 427 |||||||||||||| ||| ||||||| Sbjct: 27908202 ttcgtcgccaactcgtggatctaccc 27908227 Score = 63.9 bits (32), Expect = 5e-07 Identities = 69/80 (86%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 293 tggacaagc-tggggtgccgggcgccatcatcgtcaagaacaaccacgcctccgagttct 351 ||||||||| ||| ||||| || ||||||||| |||||||| ||||| || |||||| Sbjct: 27850116 tggacaagcatggtgtgccaggggccatcatcatcaagaaccaccacagtaccaagttct 27850175 Query: 352 tcctcaagaccatcaccctc 371 |||||||||||||||||||| Sbjct: 27850176 tcctcaagaccatcaccctc 27850195 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ggcgtcggcggcatcgtgag 90 |||||||||||||||||||| Sbjct: 24908356 ggcgtcggcggcatcgtgag 24908375
>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full insert sequence Length = 2928 Score = 186 bits (94), Expect = 5e-44 Identities = 136/150 (90%) Strand = Plus / Plus Query: 312 ggcgccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctc 371 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 437 ggcgccatcatcgtcaagaacaaccacgccgccgagttcttcctcaagaccatcaccctc 496 Query: 372 gacaacgtgcccggccgcggcaccatcgtcttcgtcgccaactcatgggtctacccgcag 431 |||||||| ||||||| |||| || ||||||||||||||||||| ||| ||||||| Sbjct: 497 gacaacgtccccggccacggcgccgtcgtcttcgtcgccaactcctggatctaccccgcc 556 Query: 432 gccaagtaccgccacaaccgcgtcttcttc 461 ||||||| ||| ||||||||||||||||| Sbjct: 557 tccaagtatcgctacaaccgcgtcttcttc 586 Score = 167 bits (84), Expect = 4e-38 Identities = 108/116 (93%) Strand = Plus / Plus Query: 115 cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 174 ||||| ||||||||||||| |||||||||||||||||||||| |||||| |||||||||| Sbjct: 157 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 216 Query: 175 cggcgccaccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgcc 230 ||||||||||||||| |||||| || ||||| |||||||||||||||||||||||| Sbjct: 217 cggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacctgcc 272
>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds Length = 2818 Score = 145 bits (73), Expect = 2e-31 Identities = 188/223 (84%), Gaps = 5/223 (2%) Strand = Plus / Plus Query: 264 caagttcgccgtcaccttcgactggtcggtggacaagct-ggggtgccgggcgccatcat 322 |||||||| | |||||||||||||| |||||| ||||| |||||||||||||||||| | Sbjct: 347 caagttcggcctcaccttcgactgggaggtggagaagctcggggtgccgggcgccatcgt 406 Query: 323 cgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctcgacaacgtgcc 382 |||||| ||| ||||| |||||||||| | || || |||||||||||| || |||| || Sbjct: 407 cgtcaacaactaccacagctccgagttcctgcttaaaaccatcaccctccacgacgtccc 466 Query: 383 cggccgc---ggcaccatcgtcttcgtcgccaactcatgggtctacccgcaggccaagta 439 ||||||| |||| | || ||||||||||||||||||| ||||||| ||||| || Sbjct: 467 cggccgcagcggcaacctcaccttcgtcgccaactcatggatctaccccgccgccaacta 526 Query: 440 ccgccacaaccgcgtcttcttcgcc-acgacacgtacctgccg 481 ||| ||| |||||||||||||||| ||||||||||||||||| Sbjct: 527 ccgatacagccgcgtcttcttcgccaacgacacgtacctgccg 569 Score = 89.7 bits (45), Expect = 8e-15 Identities = 93/109 (85%) Strand = Plus / Plus Query: 122 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 181 ||||||||| | || || |||||||||||||||| ||| ||| ||||||||||||||||| Sbjct: 123 ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 182 Query: 182 accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgcc 230 ||| |||| |||||| || |||| |||||||| ||||||||||||| Sbjct: 183 accatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgcc 231
>ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2601 Score = 137 bits (69), Expect = 4e-29 Identities = 140/163 (85%), Gaps = 3/163 (1%) Strand = Plus / Plus Query: 306 gtgccgggcgccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatc 365 |||||||| |||||||||||||||||| ||||| | |||||||||||||||||||||| Sbjct: 322 gtgccgggggccatcatcgtcaagaaccaccacagcaacgagttcttcctcaagaccatc 381 Query: 366 accctcgacaacgtgcccggccg---cggcaccatcgtcttcgtcgccaactcatgggtc 422 ||||||||| |||| |||||||| |||| || |||||||| |||||||||| |||||| Sbjct: 382 accctcgacgacgtccccggccgcgccggcgccgtcgtcttcctcgccaactcctgggtc 441 Query: 423 tacccgcaggccaagtaccgccacaaccgcgtcttcttcgcca 465 ||||| | ||||||||| || |||||||||||||||||| Sbjct: 442 taccccgccgacaagtaccgttacgaccgcgtcttcttcgcca 484 Score = 97.6 bits (49), Expect = 3e-17 Identities = 94/109 (86%) Strand = Plus / Plus Query: 122 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 181 ||||||||| | || || |||||||||||||||| |||||| ||||||||||||||||| Sbjct: 52 ctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgcc 111 Query: 182 accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgcc 230 |||||||| |||||| || |||| |||||||| ||||||||||||| Sbjct: 112 accgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgcc 160
>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16 map S2606, complete sequence Length = 124140 Score = 137 bits (69), Expect = 4e-29 Identities = 140/163 (85%), Gaps = 3/163 (1%) Strand = Plus / Plus Query: 306 gtgccgggcgccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatc 365 |||||||| |||||||||||||||||| ||||| | |||||||||||||||||||||| Sbjct: 43555 gtgccgggggccatcatcgtcaagaaccaccacagcaacgagttcttcctcaagaccatc 43614 Query: 366 accctcgacaacgtgcccggccg---cggcaccatcgtcttcgtcgccaactcatgggtc 422 ||||||||| |||| |||||||| |||| || |||||||| |||||||||| |||||| Sbjct: 43615 accctcgacgacgtccccggccgcgccggcgccgtcgtcttcctcgccaactcctgggtc 43674 Query: 423 tacccgcaggccaagtaccgccacaaccgcgtcttcttcgcca 465 ||||| | ||||||||| || |||||||||||||||||| Sbjct: 43675 taccccgccgacaagtaccgttacgaccgcgtcttcttcgcca 43717 Score = 97.6 bits (49), Expect = 3e-17 Identities = 94/109 (86%) Strand = Plus / Plus Query: 122 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 181 ||||||||| | || || |||||||||||||||| |||||| ||||||||||||||||| Sbjct: 42887 ctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgcc 42946 Query: 182 accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgcc 230 |||||||| |||||| || |||| |||||||| ||||||||||||| Sbjct: 42947 accgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgcc 42995 Score = 83.8 bits (42), Expect = 5e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 342 tccgagttcttcctcaagaccatcaccctcgacaacgtgcccggccgcggcaccatcgtc 401 |||||||||||||||||||| ||||||||||| ||| |||||| |||||| ||||| Sbjct: 60948 tccgagttcttcctcaagacgctcaccctcgacggcgtccccggcaagggcaccgtcgtc 61007 Query: 402 ttcgtcgccaactcatgggtctaccc 427 |||||||||||||| ||| ||||||| Sbjct: 61008 ttcgtcgccaactcgtggatctaccc 61033 Score = 63.9 bits (32), Expect = 5e-07 Identities = 69/80 (86%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 293 tggacaagc-tggggtgccgggcgccatcatcgtcaagaacaaccacgcctccgagttct 351 ||||||||| ||| ||||| || ||||||||| |||||||| ||||| || |||||| Sbjct: 2922 tggacaagcatggtgtgccaggggccatcatcatcaagaaccaccacagtaccaagttct 2981 Query: 352 tcctcaagaccatcaccctc 371 |||||||||||||||||||| Sbjct: 2982 tcctcaagaccatcaccctc 3001
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete sequence Length = 119329 Score = 137 bits (69), Expect = 4e-29 Identities = 140/163 (85%), Gaps = 3/163 (1%) Strand = Plus / Minus Query: 306 gtgccgggcgccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatc 365 |||||||| |||||||||||||||||| ||||| | |||||||||||||||||||||| Sbjct: 14468 gtgccgggggccatcatcgtcaagaaccaccacagcaacgagttcttcctcaagaccatc 14409 Query: 366 accctcgacaacgtgcccggccg---cggcaccatcgtcttcgtcgccaactcatgggtc 422 ||||||||| |||| |||||||| |||| || |||||||| |||||||||| |||||| Sbjct: 14408 accctcgacgacgtccccggccgcgccggcgccgtcgtcttcctcgccaactcctgggtc 14349 Query: 423 tacccgcaggccaagtaccgccacaaccgcgtcttcttcgcca 465 ||||| | ||||||||| || |||||||||||||||||| Sbjct: 14348 taccccgccgacaagtaccgttacgaccgcgtcttcttcgcca 14306 Score = 97.6 bits (49), Expect = 3e-17 Identities = 94/109 (86%) Strand = Plus / Minus Query: 122 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 181 ||||||||| | || || |||||||||||||||| |||||| ||||||||||||||||| Sbjct: 15136 ctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgcc 15077 Query: 182 accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgcc 230 |||||||| |||||| || |||| |||||||| ||||||||||||| Sbjct: 15076 accgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgcc 15028 Score = 63.9 bits (32), Expect = 5e-07 Identities = 69/80 (86%), Gaps = 1/80 (1%) Strand = Plus / Minus Query: 293 tggacaagc-tggggtgccgggcgccatcatcgtcaagaacaaccacgcctccgagttct 351 ||||||||| ||| ||||| || ||||||||| |||||||| ||||| || |||||| Sbjct: 55101 tggacaagcatggtgtgccaggggccatcatcatcaagaaccaccacagtaccaagttct 55042 Query: 352 tcctcaagaccatcaccctc 371 |||||||||||||||||||| Sbjct: 55041 tcctcaagaccatcaccctc 55022
>gb|U83904.1|HVU83904 Hordeum vulgare lipoxygenase isoenzyme 1 (Lox:Hv1) gene, promoter region and partial cds Length = 5236 Score = 135 bits (68), Expect = 1e-28 Identities = 173/206 (83%), Gaps = 4/206 (1%) Strand = Plus / Plus Query: 264 caagttcgccgtcaccttcgactggtcggtggacaagct-ggggtgccgggcgccatcat 322 |||||||| | |||||||||||||| |||||| ||||| |||||||||||||||||| | Sbjct: 4340 caagttcggcctcaccttcgactgggaggtggagaagctcggggtgccgggcgccatcgt 4399 Query: 323 cgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctcgacaacgtgcc 382 |||||| ||| ||||| |||||||||| | || || |||||||||||| || |||| || Sbjct: 4400 cgtcaacaactaccacagctccgagttcctgcttaaaaccatcaccctccacgacgtccc 4459 Query: 383 cggccgc---ggcaccatcgtcttcgtcgccaactcatgggtctacccgcaggccaagta 439 ||||||| |||| | || ||||||||||||||||||| ||||||| ||||| || Sbjct: 4460 cggccgcagcggcaacctcaccttcgtcgccaactcatggatctaccccgccgccaacta 4519 Query: 440 ccgccacaaccgcgtcttcttcgcca 465 |||| ||| ||||||||||||||||| Sbjct: 4520 ccgctacagccgcgtcttcttcgcca 4545 Score = 89.7 bits (45), Expect = 8e-15 Identities = 93/109 (85%) Strand = Plus / Plus Query: 122 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 181 ||||||||| | || || |||||||||||||||| ||| ||| ||||||||||||||||| Sbjct: 3566 ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 3625 Query: 182 accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgcc 230 ||| |||| |||||| || |||| |||||||| ||||||||||||| Sbjct: 3626 accatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgcc 3674
>gb|AF464895.1| Oryza sativa basmati-370 lipoxygenase (Lox) gene, partial cds Length = 1160 Score = 119 bits (60), Expect = 9e-24 Identities = 102/116 (87%) Strand = Plus / Plus Query: 312 ggcgccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctc 371 ||||||| || || ||||||| |||||||| ||| | || |||||||||||||||||||| Sbjct: 250 ggcgccagcaccggcaagaaccaccacgccgccggggtcgtcctcaagaccatcaccctc 309 Query: 372 gacaacgtgcccggccgcggcaccatcgtcttcgtcgccaactcatgggtctaccc 427 | |||||| ||||||| |||| || ||||||||||||||||||| ||||||||||| Sbjct: 310 gccaacgtccccggccacggcgccgtcgtcttcgtcgccaactcctgggtctaccc 365 Score = 97.6 bits (49), Expect = 3e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 146 cgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgtcaccgag 205 ||||||||||| |||||| ||||||||||||||||||||||| | | ||||| ||||| Sbjct: 1 cgcaagaacgccctcgacatcaacgacttcggcgccaccgtcctcgggcgcgtctccgag 60 Query: 206 ctcctcggccgcggcgtcacctgcc 230 |||||||||||||||||||||||| Sbjct: 61 ttcctcggccgcggcgtcacctgcc 85
>ref|XM_469412.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2686 Score = 83.8 bits (42), Expect = 5e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 342 tccgagttcttcctcaagaccatcaccctcgacaacgtgcccggccgcggcaccatcgtc 401 |||||||||||||||||||| ||||||||||| ||| |||||| |||||| ||||| Sbjct: 185 tccgagttcttcctcaagacgctcaccctcgacggcgtccccggcaagggcaccgtcgtc 244 Query: 402 ttcgtcgccaactcatgggtctaccc 427 |||||||||||||| ||| ||||||| Sbjct: 245 ttcgtcgccaactcgtggatctaccc 270
>ref|XM_469411.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3165 Score = 83.8 bits (42), Expect = 5e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 342 tccgagttcttcctcaagaccatcaccctcgacaacgtgcccggccgcggcaccatcgtc 401 |||||||||||||||||||| ||||||||||| ||| |||||| |||||| ||||| Sbjct: 664 tccgagttcttcctcaagacgctcaccctcgacggcgtccccggcaagggcaccgtcgtc 723 Query: 402 ttcgtcgccaactcatgggtctaccc 427 |||||||||||||| ||| ||||||| Sbjct: 724 ttcgtcgccaactcgtggatctaccc 749
>gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual positional specificity lipoxygenase mRNA, complete cds Length = 3154 Score = 83.8 bits (42), Expect = 5e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 342 tccgagttcttcctcaagaccatcaccctcgacaacgtgcccggccgcggcaccatcgtc 401 |||||||||||||||||||| ||||||||||| ||| |||||| |||||| ||||| Sbjct: 658 tccgagttcttcctcaagacgctcaccctcgacggcgtccccggcaagggcaccgtcgtc 717 Query: 402 ttcgtcgccaactcatgggtctaccc 427 |||||||||||||| ||| ||||||| Sbjct: 718 ttcgtcgccaactcgtggatctaccc 743
>dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O17, full insert sequence Length = 2851 Score = 83.8 bits (42), Expect = 5e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 342 tccgagttcttcctcaagaccatcaccctcgacaacgtgcccggccgcggcaccatcgtc 401 |||||||||||||||||||| ||||||||||| ||| |||||| |||||| ||||| Sbjct: 336 tccgagttcttcctcaagacgctcaccctcgacggcgtccccggcaagggcaccgtcgtc 395 Query: 402 ttcgtcgccaactcatgggtctaccc 427 |||||||||||||| ||| ||||||| Sbjct: 396 ttcgtcgccaactcgtggatctaccc 421
>dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143H13, full insert sequence Length = 3167 Score = 83.8 bits (42), Expect = 5e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 342 tccgagttcttcctcaagaccatcaccctcgacaacgtgcccggccgcggcaccatcgtc 401 |||||||||||||||||||| ||||||||||| ||| |||||| |||||| ||||| Sbjct: 665 tccgagttcttcctcaagacgctcaccctcgacggcgtccccggcaagggcaccgtcgtc 724 Query: 402 ttcgtcgccaactcatgggtctaccc 427 |||||||||||||| ||| ||||||| Sbjct: 725 ttcgtcgccaactcgtggatctaccc 750
>gb|AY103567.1| Zea mays PCO116252 mRNA sequence Length = 3135 Score = 79.8 bits (40), Expect = 8e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 343 ccgagttcttcctcaagaccatcaccctcgacaacgtgcccggccgcggcaccatcgtct 402 ||||||||||||||||||| |||||||||| ||| || ||| |||||| |||||| Sbjct: 608 ccgagttcttcctcaagacgctcaccctcgagggcgtcccaggcaagggcaccgtcgtct 667 Query: 403 tcgtcgccaactcatgggtctacccgca 430 ||||||||||||| |||||||||||||| Sbjct: 668 tcgtcgccaactcgtgggtctacccgca 695
>ref|XM_469401.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2726 Score = 63.9 bits (32), Expect = 5e-07 Identities = 69/80 (86%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 293 tggacaagc-tggggtgccgggcgccatcatcgtcaagaacaaccacgcctccgagttct 351 ||||||||| ||| ||||| || ||||||||| |||||||| ||||| || |||||| Sbjct: 302 tggacaagcatggtgtgccaggggccatcatcatcaagaaccaccacagtaccaagttct 361 Query: 352 tcctcaagaccatcaccctc 371 |||||||||||||||||||| Sbjct: 362 tcctcaagaccatcaccctc 381
>dbj|AB099850.1| Oryza sativa (japonica cultivar-group) r9-LOX1 mRNA for 9-lipoxigenase, complete cds Length = 2988 Score = 63.9 bits (32), Expect = 5e-07 Identities = 69/80 (86%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 293 tggacaagc-tggggtgccgggcgccatcatcgtcaagaacaaccacgcctccgagttct 351 ||||||||| ||| ||||| || ||||||||| |||||||| ||||| || |||||| Sbjct: 368 tggacaagcatggtgtgccaggggccatcatcatcaagaaccaccacagtaccaagttct 427 Query: 352 tcctcaagaccatcaccctc 371 |||||||||||||||||||| Sbjct: 428 tcctcaagaccatcaccctc 447
>dbj|AK103565.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132L12, full insert sequence Length = 2830 Score = 63.9 bits (32), Expect = 5e-07 Identities = 69/80 (86%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 293 tggacaagc-tggggtgccgggcgccatcatcgtcaagaacaaccacgcctccgagttct 351 ||||||||| ||| ||||| || ||||||||| |||||||| ||||| || |||||| Sbjct: 376 tggacaagcatggtgtgccaggggccatcatcatcaagaaccaccacagtaccaagttct 435 Query: 352 tcctcaagaccatcaccctc 371 |||||||||||||||||||| Sbjct: 436 tcctcaagaccatcaccctc 455
>gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, complete cds Length = 3003 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 341 ctccgagttcttcctcaagaccatcaccctcgacaacgtgcccggccgcggcaccatcgt 400 |||||||| | | |||||||| |||||||| || ||| |||||| |||||| |||| Sbjct: 505 ctccgagtacctgctcaagacgctcaccctccacggcgtccccggcaagggcaccgtcgt 564 Query: 401 cttcgtcgccaactcatgggtctaccc 427 ||||||||||||||| ||| ||||||| Sbjct: 565 cttcgtcgccaactcctggatctaccc 591
>gb|AC109929.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0093J03, complete sequence Length = 200626 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 345 gagttcttcctcaagaccatcaccctcgaca 375 ||||||||| |||| |||||||||||||||| Sbjct: 134348 gagttcttcgtcaacaccatcaccctcgaca 134378
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 345 gagttcttcctcaagaccatcaccctcgaca 375 ||||||||| |||| |||||||||||||||| Sbjct: 20827287 gagttcttcgtcaacaccatcaccctcgaca 20827317
>dbj|AK102084.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082M03, full insert sequence Length = 2930 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 345 gagttcttcctcaagaccatcaccctcgaca 375 ||||||||| |||| |||||||||||||||| Sbjct: 417 gagttcttcgtcaacaccatcaccctcgaca 447
>dbj|AK073570.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046P13, full insert sequence Length = 3010 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 345 gagttcttcctcaagaccatcaccctcgaca 375 ||||||||| |||| |||||||||||||||| Sbjct: 417 gagttcttcgtcaacaccatcaccctcgaca 447
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 345 gagttcttcctcaagaccatcaccctcgaca 375 ||||||||| |||| |||||||||||||||| Sbjct: 21137522 gagttcttcgtcaacaccatcaccctcgaca 21137552
>gb|AE005807.1| Caulobacter crescentus CB15 section 133 of 359 of the complete genome Length = 8803 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 154 cgcgctcgacttcaacgacttcggcg 179 ||||| |||||||||||||||||||| Sbjct: 4469 cgcgcacgacttcaacgacttcggcg 4494
>ref|NM_003028.1| Homo sapiens Src homology 2 domain containing adaptor protein B (SHB), mRNA Length = 2306 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cggggggcctccggggcgccc 119 ||||||||||||||||||||| Sbjct: 469 cggggggcctccggggcgccc 449
>gb|AY596511.1| Helicosporidium sp. ex Simulium jonesii gamma-carbonic anhydrase mRNA, partial cds Length = 775 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 175 cggcgccaccgtcatggacggcgtcaccg 203 ||||||||| ||||||||||||| ||||| Sbjct: 400 cggcgccacggtcatggacggcgccaccg 428
>emb|X75342.1|HSSHB H.sapiens SHB mRNA Length = 2306 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cggggggcctccggggcgccc 119 ||||||||||||||||||||| Sbjct: 469 cggggggcctccggggcgccc 449
>ref|NM_195879.1| Oryza sativa (japonica cultivar-group) putative cellulose synthase D-like protein (OSJNBb0052C09.2), mRNA Length = 2493 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 ccacaaccgcgtcttcttcg 462 |||||||||||||||||||| Sbjct: 1257 ccacaaccgcgtcttcttcg 1276
>ref|XM_478669.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2694 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 ccacaaccgcgtcttcttcg 462 |||||||||||||||||||| Sbjct: 1407 ccacaaccgcgtcttcttcg 1426
>ref|XM_478655.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2655 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 ccacaaccgcgtcttcttcg 462 |||||||||||||||||||| Sbjct: 1329 ccacaaccgcgtcttcttcg 1348
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 atcaccctcgacaacgtgcc 382 |||||||||||||||||||| Sbjct: 301337 atcaccctcgacaacgtgcc 301318
>gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0088L13 map near C50029S, complete sequence Length = 129900 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ggcgtcggcggcatcgtgag 90 |||||||||||||||||||| Sbjct: 52268 ggcgtcggcggcatcgtgag 52287
>gb|AC090441.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0052C09, complete sequence Length = 139468 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 ccacaaccgcgtcttcttcg 462 |||||||||||||||||||| Sbjct: 19090 ccacaaccgcgtcttcttcg 19071
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 270 cgccgtcaccttcgactggtcggtggac 297 ||||| ||||||||| |||||||||||| Sbjct: 3465594 cgccggcaccttcgaatggtcggtggac 3465621
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 acctgccgttcatcaccaccggcg 259 ||||||||||||||| |||||||| Sbjct: 288875 acctgccgttcatcatcaccggcg 288852
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 236 acctgccgttcatcaccaccggcg 259 ||||||||||||||| |||||||| Sbjct: 153202 acctgccgttcatcatcaccggcg 153225
>gb|AY316746.1| Rhizobium sp. NGR234 megaplasmid 2 contig 2, complete sequence Length = 236455 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 cggcggcatcgtgagcgacctgac 99 ||||||||||| |||||||||||| Sbjct: 205636 cggcggcatcgagagcgacctgac 205659
>emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete chromosome; segment 9/12 Length = 323450 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 cggcggcatcgtgagcgacctgac 99 ||||||||||| |||||||||||| Sbjct: 80122 cggcggcatcgagagcgacctgac 80099
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 ggtgccgggcgccatcatcg 324 |||||||||||||||||||| Sbjct: 608859 ggtgccgggcgccatcatcg 608840
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 agctcctcggccgcggcgtc 223 |||||||||||||||||||| Sbjct: 1962239 agctcctcggccgcggcgtc 1962220
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 gccgttcatcaccaccggcg 259 |||||||||||||||||||| Sbjct: 1867059 gccgttcatcaccaccggcg 1867040
>emb|AL731878.4|CNS08C8I Oryza sativa chromosome 3, . BAC OSJNBb0116P11 of library OSJNBb from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128559 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ggcgtcggcggcatcgtgag 90 |||||||||||||||||||| Sbjct: 103984 ggcgtcggcggcatcgtgag 104003
>gb|AF432505.1|AF432505 Oryza sativa cellulose synthase-like protein OsCslF4 gene, complete cds Length = 13642 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 ccacaaccgcgtcttcttcg 462 |||||||||||||||||||| Sbjct: 11940 ccacaaccgcgtcttcttcg 11959
>gb|AF432504.1|AF432504 Oryza sativa cellulose synthase-like protein OsCslF3 gene, complete cds Length = 13642 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 ccacaaccgcgtcttcttcg 462 |||||||||||||||||||| Sbjct: 11940 ccacaaccgcgtcttcttcg 11959
>tpg|BK000091.1| TPA: TPA_exp: Oryza sativa cellulose synthase-like F7 gene, complete cds Length = 11160 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 ccacaaccgcgtcttcttcg 462 |||||||||||||||||||| Sbjct: 7071 ccacaaccgcgtcttcttcg 7090
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 ccacaaccgcgtcttcttcg 462 |||||||||||||||||||| Sbjct: 17408420 ccacaaccgcgtcttcttcg 17408401
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 ccacaaccgcgtcttcttcg 462 |||||||||||||||||||| Sbjct: 9666565 ccacaaccgcgtcttcttcg 9666546
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 ccacaaccgcgtcttcttcg 462 |||||||||||||||||||| Sbjct: 21953770 ccacaaccgcgtcttcttcg 21953751 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 ccacaaccgcgtcttcttcg 462 |||||||||||||||||||| Sbjct: 21849390 ccacaaccgcgtcttcttcg 21849371
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 174 tcggcgccaccgtcatggacggcg 197 ||||||||| |||||||||||||| Sbjct: 2990742 tcggcgccatcgtcatggacggcg 2990719
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 ggcgtcggcggcatcgtgagcgac 94 |||||||||||||||||| ||||| Sbjct: 5079435 ggcgtcggcggcatcgtgcgcgac 5079412
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 ccgcggcaccatcgtcttcg 405 |||||||||||||||||||| Sbjct: 2565281 ccgcggcaccatcgtcttcg 2565300 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 ggcgtcggcggcatcgtgagcgac 94 |||||||||||||||||| ||||| Sbjct: 590306 ggcgtcggcggcatcgtgcgcgac 590329 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 144 tgcgcaagaacgcgctcgacttca 167 ||||||||||| |||||||||||| Sbjct: 206796 tgcgcaagaacccgctcgacttca 206773
>dbj|AP004261.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0013G11 Length = 151405 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 ccacaaccgcgtcttcttcg 462 |||||||||||||||||||| Sbjct: 45814 ccacaaccgcgtcttcttcg 45795
>dbj|AK109329.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-B01, full insert sequence Length = 1556 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 ggcgtcggcggcatcgtgag 90 |||||||||||||||||||| Sbjct: 613 ggcgtcggcggcatcgtgag 594
>dbj|AK110467.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-G08, full insert sequence Length = 2729 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 ccacaaccgcgtcttcttcg 462 |||||||||||||||||||| Sbjct: 1295 ccacaaccgcgtcttcttcg 1314
>dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0041B22 Length = 142446 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 ccacaaccgcgtcttcttcg 462 |||||||||||||||||||| Sbjct: 63066 ccacaaccgcgtcttcttcg 63047
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 190 ggacggcgtcaccgagctcctcggccgcggcg 221 ||||||||| | |||| ||||||||||||||| Sbjct: 1448865 ggacggcgtgatcgagttcctcggccgcggcg 1448834
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 ggcgtcggcggcatcgtgagcgac 94 |||||||||||||||||| ||||| Sbjct: 657733 ggcgtcggcggcatcgtgcgcgac 657756
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 ccacaaccgcgtcttcttcg 462 |||||||||||||||||||| Sbjct: 9672604 ccacaaccgcgtcttcttcg 9672585
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 ccacaaccgcgtcttcttcg 462 |||||||||||||||||||| Sbjct: 17362791 ccacaaccgcgtcttcttcg 17362772
>emb|AL731763.1|CNS07YQA Oryza sativa chromosome 12, . BAC OSJNBa0090O14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 129619 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 ccacaaccgcgtcttcttcg 462 |||||||||||||||||||| Sbjct: 123986 ccacaaccgcgtcttcttcg 124005 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,570,165 Number of Sequences: 3902068 Number of extensions: 2570165 Number of successful extensions: 53595 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 74 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 51883 Number of HSP's gapped (non-prelim): 1681 length of query: 486 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 464 effective length of database: 17,147,199,772 effective search space: 7956300694208 effective search space used: 7956300694208 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
