ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl30h06 |
|---|---|
| Clone Library Name | barley_pub |
>NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)| (214 kDa nucleoporin) (CAN protein) Length = 2090 Score = 30.8 bits (68), Expect = 1.7 Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Frame = +1 Query: 166 VATLVISMSVAPHFNLGLVPRDMNGSIPVSSANSSGP-SIGVSSLVTDGNLSLSGGAQFQ 342 V + + SVAP + GS+PV+SA SSG S G +SL + G S S G+Q Sbjct: 1388 VTSSATTTSVAPPAATSTSSTAVFGSLPVTSAGSSGVISFGGTSL-SAGKTSFSFGSQQT 1446 Query: 343 HST 351 +ST Sbjct: 1447 NST 1449
>Y4105_ARATH (Q9M158) Putative protein At4g01050| Length = 466 Score = 30.0 bits (66), Expect = 2.9 Identities = 21/66 (31%), Positives = 31/66 (46%) Frame = +1 Query: 133 SIIKILQGDG*VATLVISMSVAPHFNLGLVPRDMNGSIPVSSANSSGPSIGVSSLVTDGN 312 S +K G + T V+S + AP +L SS +S G G+S+ VTD Sbjct: 44 SFLKRFNGGLALLTSVLSSATAPAKSLTYEEALQQSMTTSSSFDSDGLIEGISNFVTDNP 103 Query: 313 LSLSGG 330 L ++GG Sbjct: 104 LVIAGG 109
>CLA4_CANAL (O14427) Serine/threonine-protein kinase CLA4 (EC 2.7.11.1)| Length = 971 Score = 29.6 bits (65), Expect = 3.8 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = +1 Query: 235 NGSIPVSSANSSGPSIGVSSLVTDGNLSLSGGAQFQHSTSMNAD 366 NGS+ +S++S + SS++T GN +SG F H + D Sbjct: 203 NGSLNGNSSSSPTSGLLSSSVLTGGNSGVSGPINFTHKVHVGFD 246
>GBF_DICDI (P36417) G-box-binding factor (GBF)| Length = 708 Score = 29.3 bits (64), Expect = 5.0 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 6/52 (11%) Frame = +1 Query: 223 PRDMNGSIPVSSANSSGPSIG------VSSLVTDGNLSLSGGAQFQHSTSMN 360 P +N P S N S PSIG +S+ DG + +SG + + S+S+N Sbjct: 587 PLQLNYQTPTCSPNPSLPSIGGNLNSQANSIKPDGGILISGLSPPKSSSSLN 638
>MURA_CAUCR (Q9A5U7) UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC| 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT) Length = 429 Score = 29.3 bits (64), Expect = 5.0 Identities = 14/31 (45%), Positives = 21/31 (67%) Frame = +1 Query: 232 MNGSIPVSSANSSGPSIGVSSLVTDGNLSLS 324 +NG+IPVS A +S + +SL+TD L L+ Sbjct: 12 LNGTIPVSGAKNSAIKLMAASLLTDEPLRLT 42
>MURA_BRUSU (P65453) UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC| 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT) Length = 429 Score = 28.9 bits (63), Expect = 6.6 Identities = 12/30 (40%), Positives = 21/30 (70%) Frame = +1 Query: 232 MNGSIPVSSANSSGPSIGVSSLVTDGNLSL 321 +NG IP+S A ++ + ++SL+TD L+L Sbjct: 12 LNGVIPISGAKNAALPLMIASLLTDDTLTL 41
>MURA_BRUME (P65452) UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC| 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT) Length = 429 Score = 28.9 bits (63), Expect = 6.6 Identities = 12/30 (40%), Positives = 21/30 (70%) Frame = +1 Query: 232 MNGSIPVSSANSSGPSIGVSSLVTDGNLSL 321 +NG IP+S A ++ + ++SL+TD L+L Sbjct: 12 LNGVIPISGAKNAALPLMIASLLTDDTLTL 41
>MURA_BRUAB (Q57F97) UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC| 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT) Length = 429 Score = 28.9 bits (63), Expect = 6.6 Identities = 12/30 (40%), Positives = 21/30 (70%) Frame = +1 Query: 232 MNGSIPVSSANSSGPSIGVSSLVTDGNLSL 321 +NG IP+S A ++ + ++SL+TD L+L Sbjct: 12 LNGVIPISGAKNAALPLMIASLLTDDTLTL 41
>MURA_BRUA2 (Q2YPB6) UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC| 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT) Length = 429 Score = 28.9 bits (63), Expect = 6.6 Identities = 12/30 (40%), Positives = 21/30 (70%) Frame = +1 Query: 232 MNGSIPVSSANSSGPSIGVSSLVTDGNLSL 321 +NG IP+S A ++ + ++SL+TD L+L Sbjct: 12 LNGVIPISGAKNAALPLMIASLLTDDTLTL 41
>RASF7_HUMAN (Q02833) Ras association domain-containing protein 7 (HRAS1-related| cluster protein 1) Length = 373 Score = 28.9 bits (63), Expect = 6.6 Identities = 19/59 (32%), Positives = 24/59 (40%) Frame = -3 Query: 329 PPESDKLPSVTKELTPILGPEEFAELTGMLPFMSLGTSPRLKCGATDMEITSVATQPSP 153 PP D+ P T+ P P L G G PR + G D E+ VA P+P Sbjct: 306 PPRPDRGPPGTQGPLP---PAREESLLGAPSESHAGAQPRPRGGPHDAELLEVAAAPAP 361
>VGLB_TUHV2 (Q9WRL5) Glycoprotein B precursor| Length = 944 Score = 28.5 bits (62), Expect = 8.6 Identities = 15/29 (51%), Positives = 17/29 (58%) Frame = +2 Query: 8 PKQRRERLEQARPSRRRRGPELAGGAKIS 94 P RR+RL RPSRRR LA G + S Sbjct: 5 PPLRRQRLLLPRPSRRRPPARLASGRRSS 33
>ADEC2_DESPS (Q6ANH1) Adenine deaminase 2 (EC 3.5.4.2) (Adenase 2) (Adenine| aminase 2) Length = 576 Score = 28.5 bits (62), Expect = 8.6 Identities = 25/96 (26%), Positives = 38/96 (39%) Frame = -3 Query: 458 LCCMVDPSMTDEPDMLLDENDIGEEGRRMNESAFMLVLC*NWAPPESDKLPSVTKELTPI 279 + C V+ + + ++L + E M + M C W KL S+ + + Sbjct: 476 MACAVEALIAQDGGIVLVNGEEVVESMPMPIAGLMSDQCGEWVEA---KLTSIHSKAHEV 532 Query: 278 LGPEEFAELTGMLPFMSLGTSPRLKCGATDMEITSV 171 LG E L FMSL P +K TDM + V Sbjct: 533 LGVNADVEPVMTLCFMSLAVIPEIK--LTDMGLFDV 566 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.129 0.370 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,951,817 Number of Sequences: 219361 Number of extensions: 1379171 Number of successful extensions: 3563 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 3447 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3560 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
