ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl30h06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_185466.2| Oryza sativa (japonica cultivar-group), mRNA 226 5e-56
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 226 5e-56
3dbj|AP002838.2| Oryza sativa (japonica cultivar-group) genomic D... 226 5e-56
4dbj|AP001168.1| Oryza sativa (japonica cultivar-group) genomic D... 226 5e-56
5dbj|AK099098.1| Oryza sativa (japonica cultivar-group) cDNA clon... 226 5e-56
6dbj|AK069048.1| Oryza sativa (japonica cultivar-group) cDNA clon... 226 5e-56
7ref|XM_550567.1| Oryza sativa (japonica cultivar-group), mRNA 137 4e-29
8dbj|AK100438.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 4e-29
9gb|AC138157.3| Carollia perspicillata clone 45N16, complete sequ... 42 1.6
10dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co... 42 1.6
11gb|AC129342.5| Rattus norvegicus BAC CH230-229B21 (Children's H... 42 1.6
12gb|AF309689.1|AF309689 Neurospora crassa chromosome 4 pdx-1 region 42 1.6
13dbj|AB025626.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 42 1.6
14gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold 42 1.6
15gb|AC008429.6| Homo sapiens chromosome 5 clone CTC-308K20, compl... 42 1.6
16gb|AC116384.9| Mus musculus chromosome 3, clone RP23-20L19, comp... 40 6.2
17gb|AC129577.18| Mus musculus chromosome 5, clone RP24-385D18, co... 40 6.2
18gb|AC102413.8| Mus musculus chromosome 3, clone RP24-462F18, com... 40 6.2
19gb|AY363102.1|AY363102S1 Mus musculus diadenosine triphosphate h... 40 6.2
20gb|AC127681.4| Mus musculus BAC clone RP24-164P24 from chromosom... 40 6.2
21emb|Z82196.2|HS288L1 Human DNA sequence from clone RP1-288L1 on ... 40 6.2
22emb|Z75889.1|HS267P19 Human DNA sequence from clone RP1-267P19 o... 40 6.2
23emb|AL596329.5| Human DNA sequence from clone RP11-179D6 on chro... 40 6.2
24emb|AL360172.17| Human DNA sequence from clone RP11-402D22 on ch... 40 6.2
25emb|AL773507.7| Mouse DNA sequence from clone RP23-322E14 on chr... 40 6.2
26gb|AC146347.4| Pan troglodytes clone rp43-34h2, complete sequence 40 6.2
27gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 6.2
28gb|AC090846.4| Homo sapiens chromosome 15, clone RP11-485O10, co... 40 6.2
29gb|AC007937.18| Mus musculus chromosome 10, clone RP21-536F4, co... 40 6.2
30gb|AC158618.5| Mus musculus 10 BAC RP23-280M4 (Roswell Park Canc... 40 6.2
31gb|AC154708.3| Mus musculus BAC clone RP24-355K5 from chromosome... 40 6.2
32gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 6.2
33gb|AC153892.12| Mus musculus 10 BAC RP23-113O12 (Roswell Park Ca... 40 6.2
34gb|AC012379.7|AC012379 Homo sapiens chromosome 15 clone RP11-485... 40 6.2
35gb|AC013473.8| Homo sapiens BAC clone RP11-504G5 from 2, complet... 40 6.2
36dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.2
37gb|AC134903.4| Mus musculus BAC clone RP23-329A21 from chromosom... 40 6.2
38gb|AC157939.15| Mus musculus chromosome 3, clone RP23-51P17, com... 40 6.2
39emb|CR854964.10| Zebrafish DNA sequence from clone DKEY-58J19 in... 40 6.2
40gb|AC148321.7| Mus musculus BAC clone RP24-512H17 from 19, compl... 40 6.2
41emb|AL353724.11| Human DNA sequence from clone RP11-448I13 on ch... 40 6.2
42emb|AL928832.7| Mouse DNA sequence from clone RP23-261N18 on chr... 40 6.2
43emb|AL732563.5| Mouse DNA sequence from clone RP23-209M8 on chro... 40 6.2
44gb|AC160723.2| Mus musculus BAC clone RP24-499G15 from chromosom... 40 6.2 
>ref|NM_185466.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2802

 Score =  226 bits (114), Expect = 5e-56
 Identities = 222/258 (86%)
 Strand = Plus / Plus

                                                                       
Query: 183 ctccatgtctgtggctccacacttcaatcttggacttgttcccagggacatgaatggtag 242
           ||||||||||| ||| |||  || ||| |||||||||||||||||||| ||| |||||||
Sbjct: 189 ctccatgtctggggcgccatgctccaaccttggacttgttcccagggatatgcatggtag 248

                                                                       
Query: 243 cattccagttagttctgcaaattcctctgggccaagtattggtgttagctctttggtgac 302
            || ||  ||||  || ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 249 tatccctattagcactacaaattcctctgggccaagcattggtgttagctctttggtgac 308

                                                                       
Query: 303 cgatggcaacttatcactctctggaggtgcccagtttcagcatagcacaagcatgaatgc 362
            ||||  |||| ||| ||||| |||||||||||||| ||||  || || |||||||||||
Sbjct: 309 ggatgctaactcatcgctctccggaggtgcccagttgcagccaagtacgagcatgaatgc 368

                                                                       
Query: 363 tgattcattcatgcgccttccttcctcaccgatgtcattttcatccaataacatatctgg 422
           |||||||||||||||||||||| | || || ||||| ||||||||||||||||| |||||
Sbjct: 369 tgattcattcatgcgccttcctgcttccccaatgtcgttttcatccaataacatctctgg 428

                             
Query: 423 ctcgtcagtcattgatgg 440
            || ||||| ||||||||
Sbjct: 429 atcttcagttattgatgg 446
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  226 bits (114), Expect = 5e-56
 Identities = 222/258 (86%)
 Strand = Plus / Minus

                                                                           
Query: 183     ctccatgtctgtggctccacacttcaatcttggacttgttcccagggacatgaatggtag 242
               ||||||||||| ||| |||  || ||| |||||||||||||||||||| ||| |||||||
Sbjct: 1393542 ctccatgtctggggcgccatgctccaaccttggacttgttcccagggatatgcatggtag 1393483

                                                                           
Query: 243     cattccagttagttctgcaaattcctctgggccaagtattggtgttagctctttggtgac 302
                || ||  ||||  || ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1393482 tatccctattagcactacaaattcctctgggccaagcattggtgttagctctttggtgac 1393423

                                                                           
Query: 303     cgatggcaacttatcactctctggaggtgcccagtttcagcatagcacaagcatgaatgc 362
                ||||  |||| ||| ||||| |||||||||||||| ||||  || || |||||||||||
Sbjct: 1393422 ggatgctaactcatcgctctccggaggtgcccagttgcagccaagtacgagcatgaatgc 1393363

                                                                           
Query: 363     tgattcattcatgcgccttccttcctcaccgatgtcattttcatccaataacatatctgg 422
               |||||||||||||||||||||| | || || ||||| ||||||||||||||||| |||||
Sbjct: 1393362 tgattcattcatgcgccttcctgcttccccaatgtcgttttcatccaataacatctctgg 1393303

                                 
Query: 423     ctcgtcagtcattgatgg 440
                || ||||| ||||||||
Sbjct: 1393302 atcttcagttattgatgg 1393285
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>dbj|AP002838.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
           BAC clone:OSJNBa0038F22
          Length = 101666

 Score =  226 bits (114), Expect = 5e-56
 Identities = 222/258 (86%)
 Strand = Plus / Minus

                                                                       
Query: 183 ctccatgtctgtggctccacacttcaatcttggacttgttcccagggacatgaatggtag 242
           ||||||||||| ||| |||  || ||| |||||||||||||||||||| ||| |||||||
Sbjct: 828 ctccatgtctggggcgccatgctccaaccttggacttgttcccagggatatgcatggtag 769

                                                                       
Query: 243 cattccagttagttctgcaaattcctctgggccaagtattggtgttagctctttggtgac 302
            || ||  ||||  || ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 768 tatccctattagcactacaaattcctctgggccaagcattggtgttagctctttggtgac 709

                                                                       
Query: 303 cgatggcaacttatcactctctggaggtgcccagtttcagcatagcacaagcatgaatgc 362
            ||||  |||| ||| ||||| |||||||||||||| ||||  || || |||||||||||
Sbjct: 708 ggatgctaactcatcgctctccggaggtgcccagttgcagccaagtacgagcatgaatgc 649

                                                                       
Query: 363 tgattcattcatgcgccttccttcctcaccgatgtcattttcatccaataacatatctgg 422
           |||||||||||||||||||||| | || || ||||| ||||||||||||||||| |||||
Sbjct: 648 tgattcattcatgcgccttcctgcttccccaatgtcgttttcatccaataacatctctgg 589

                             
Query: 423 ctcgtcagtcattgatgg 440
            || ||||| ||||||||
Sbjct: 588 atcttcagttattgatgg 571
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>dbj|AP001168.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              clone:P0425F02
          Length = 176979

 Score =  226 bits (114), Expect = 5e-56
 Identities = 222/258 (86%)
 Strand = Plus / Minus

                                                                          
Query: 183    ctccatgtctgtggctccacacttcaatcttggacttgttcccagggacatgaatggtag 242
              ||||||||||| ||| |||  || ||| |||||||||||||||||||| ||| |||||||
Sbjct: 102081 ctccatgtctggggcgccatgctccaaccttggacttgttcccagggatatgcatggtag 102022

                                                                          
Query: 243    cattccagttagttctgcaaattcctctgggccaagtattggtgttagctctttggtgac 302
               || ||  ||||  || ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 102021 tatccctattagcactacaaattcctctgggccaagcattggtgttagctctttggtgac 101962

                                                                          
Query: 303    cgatggcaacttatcactctctggaggtgcccagtttcagcatagcacaagcatgaatgc 362
               ||||  |||| ||| ||||| |||||||||||||| ||||  || || |||||||||||
Sbjct: 101961 ggatgctaactcatcgctctccggaggtgcccagttgcagccaagtacgagcatgaatgc 101902

                                                                          
Query: 363    tgattcattcatgcgccttccttcctcaccgatgtcattttcatccaataacatatctgg 422
              |||||||||||||||||||||| | || || ||||| ||||||||||||||||| |||||
Sbjct: 101901 tgattcattcatgcgccttcctgcttccccaatgtcgttttcatccaataacatctctgg 101842

                                
Query: 423    ctcgtcagtcattgatgg 440
               || ||||| ||||||||
Sbjct: 101841 atcttcagttattgatgg 101824
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>dbj|AK099098.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023I02, full
           insert sequence
          Length = 2802

 Score =  226 bits (114), Expect = 5e-56
 Identities = 222/258 (86%)
 Strand = Plus / Plus

                                                                       
Query: 183 ctccatgtctgtggctccacacttcaatcttggacttgttcccagggacatgaatggtag 242
           ||||||||||| ||| |||  || ||| |||||||||||||||||||| ||| |||||||
Sbjct: 189 ctccatgtctggggcgccatgctccaaccttggacttgttcccagggatatgcatggtag 248

                                                                       
Query: 243 cattccagttagttctgcaaattcctctgggccaagtattggtgttagctctttggtgac 302
            || ||  ||||  || ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 249 tatccctattagcactacaaattcctctgggccaagcattggtgttagctctttggtgac 308

                                                                       
Query: 303 cgatggcaacttatcactctctggaggtgcccagtttcagcatagcacaagcatgaatgc 362
            ||||  |||| ||| ||||| |||||||||||||| ||||  || || |||||||||||
Sbjct: 309 ggatgctaactcatcgctctccggaggtgcccagttgcagccaagtacgagcatgaatgc 368

                                                                       
Query: 363 tgattcattcatgcgccttccttcctcaccgatgtcattttcatccaataacatatctgg 422
           |||||||||||||||||||||| | || || ||||| ||||||||||||||||| |||||
Sbjct: 369 tgattcattcatgcgccttcctgcttccccaatgtcgttttcatccaataacatctctgg 428

                             
Query: 423 ctcgtcagtcattgatgg 440
            || ||||| ||||||||
Sbjct: 429 atcttcagttattgatgg 446
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>dbj|AK069048.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009M14, full
           insert sequence
          Length = 2900

 Score =  226 bits (114), Expect = 5e-56
 Identities = 222/258 (86%)
 Strand = Plus / Plus

                                                                       
Query: 183 ctccatgtctgtggctccacacttcaatcttggacttgttcccagggacatgaatggtag 242
           ||||||||||| ||| |||  || ||| |||||||||||||||||||| ||| |||||||
Sbjct: 190 ctccatgtctggggcgccatgctccaaccttggacttgttcccagggatatgcatggtag 249

                                                                       
Query: 243 cattccagttagttctgcaaattcctctgggccaagtattggtgttagctctttggtgac 302
            || ||  ||||  || ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 250 tatccctattagcactacaaattcctctgggccaagcattggtgttagctctttggtgac 309

                                                                       
Query: 303 cgatggcaacttatcactctctggaggtgcccagtttcagcatagcacaagcatgaatgc 362
            ||||  |||| ||| ||||| |||||||||||||| ||||  || || |||||||||||
Sbjct: 310 ggatgctaactcatcgctctccggaggtgcccagttgcagccaagtacgagcatgaatgc 369

                                                                       
Query: 363 tgattcattcatgcgccttccttcctcaccgatgtcattttcatccaataacatatctgg 422
           |||||||||||||||||||||| | || || ||||| ||||||||||||||||| |||||
Sbjct: 370 tgattcattcatgcgccttcctgcttccccaatgtcgttttcatccaataacatctctgg 429

                             
Query: 423 ctcgtcagtcattgatgg 440
            || ||||| ||||||||
Sbjct: 430 atcttcagttattgatgg 447
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>ref|XM_550567.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3039

 Score =  137 bits (69), Expect = 4e-29
 Identities = 138/161 (85%)
 Strand = Plus / Plus

                                                                       
Query: 183 ctccatgtctgtggctccacacttcaatcttggacttgttcccagggacatgaatggtag 242
           ||||||||||| ||| |||  || ||| |||||||||||||||||||| ||| |||||||
Sbjct: 189 ctccatgtctggggcgccatgctccaaccttggacttgttcccagggatatgcatggtag 248

                                                                       
Query: 243 cattccagttagttctgcaaattcctctgggccaagtattggtgttagctctttggtgac 302
            || ||  ||||  || ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 249 tatccctattagcactacaaattcctctgggccaagcattggtgttagctctttggtgac 308

                                                    
Query: 303 cgatggcaacttatcactctctggaggtgcccagtttcagc 343
            ||||  |||| ||| ||||| |||||||||||||| ||||
Sbjct: 309 ggatgctaactcatcgctctccggaggtgcccagttgcagc 349
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>dbj|AK100438.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088P13, full
           insert sequence
          Length = 3039

 Score =  137 bits (69), Expect = 4e-29
 Identities = 138/161 (85%)
 Strand = Plus / Plus

                                                                       
Query: 183 ctccatgtctgtggctccacacttcaatcttggacttgttcccagggacatgaatggtag 242
           ||||||||||| ||| |||  || ||| |||||||||||||||||||| ||| |||||||
Sbjct: 189 ctccatgtctggggcgccatgctccaaccttggacttgttcccagggatatgcatggtag 248

                                                                       
Query: 243 cattccagttagttctgcaaattcctctgggccaagtattggtgttagctctttggtgac 302
            || ||  ||||  || ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 249 tatccctattagcactacaaattcctctgggccaagcattggtgttagctctttggtgac 308

                                                    
Query: 303 cgatggcaacttatcactctctggaggtgcccagtttcagc 343
            ||||  |||| ||| ||||| |||||||||||||| ||||
Sbjct: 309 ggatgctaactcatcgctctccggaggtgcccagttgcagc 349
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>gb|AC138157.3| Carollia perspicillata clone 45N16, complete sequence
          Length = 114626

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 177   ggtgatctccatgtctgtggctcca 201
             |||||||||||| ||||||||||||
Sbjct: 66399 ggtgatctccatttctgtggctcca 66375
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>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 176     tggtgatctccatgtctgtgg 196
               |||||||||||||||||||||
Sbjct: 5581510 tggtgatctccatgtctgtgg 5581530
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>gb|AC129342.5| Rattus norvegicus  BAC CH230-229B21 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 224257

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 327    aggtgcccagtttcagcatagcaca 351
              ||||||||||| |||||||||||||
Sbjct: 164430 aggtgcccagtgtcagcatagcaca 164454
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>gb|AF309689.1|AF309689 Neurospora crassa chromosome 4 pdx-1 region
          Length = 36030

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 153   aggtgatggttgagttgcaac 173
             |||||||||||||||||||||
Sbjct: 31005 aggtgatggttgagttgcaac 30985
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>dbj|AB025626.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MMJ24
          Length = 54452

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 272   ggccaagtattggtgttagct 292
             |||||||||||||||||||||
Sbjct: 12047 ggccaagtattggtgttagct 12067
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>gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold
          Length = 1501503

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 177    ggtgatctccatgtctgtggctcca 201
              |||||||||||| ||||||||||||
Sbjct: 207500 ggtgatctccatttctgtggctcca 207476
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>gb|AC008429.6| Homo sapiens chromosome 5 clone CTC-308K20, complete sequence
          Length = 159423

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 256   tctgcaaattcctctgggcca 276
             |||||||||||||||||||||
Sbjct: 35615 tctgcaaattcctctgggcca 35635
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>gb|AC116384.9| Mus musculus chromosome 3, clone RP23-20L19, complete sequence
          Length = 203580

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 276   aagtattggtgttagctctttggt 299
             |||||||||||||||||| |||||
Sbjct: 44937 aagtattggtgttagctcattggt 44960
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>gb|AC129577.18| Mus musculus chromosome 5, clone RP24-385D18, complete sequence
          Length = 143819

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 276   aagtattggtgttagctctt 295
             ||||||||||||||||||||
Sbjct: 47188 aagtattggtgttagctctt 47169
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>gb|AC102413.8| Mus musculus chromosome 3, clone RP24-462F18, complete sequence
          Length = 181851

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 276   aagtattggtgttagctctt 295
             ||||||||||||||||||||
Sbjct: 48851 aagtattggtgttagctctt 48870
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>gb|AY363102.1|AY363102S1 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exons 1 and
              2
          Length = 309506

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 104    cagtagcacccatcgagtgg 123
              ||||||||||||||||||||
Sbjct: 125712 cagtagcacccatcgagtgg 125693
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>gb|AC127681.4| Mus musculus BAC clone RP24-164P24 from chromosome 3, complete sequence
          Length = 175131

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 276    aagtattggtgttagctctttggt 299
              |||||||||||||||||| |||||
Sbjct: 156403 aagtattggtgttagctcattggt 156426
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>emb|Z82196.2|HS288L1 Human DNA sequence from clone RP1-288L1 on chromosome 22, complete
             sequence
          Length = 118593

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   gatggttgagttgcaacact 176
             ||||||||||||||||||||
Sbjct: 25731 gatggttgagttgcaacact 25712
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>emb|Z75889.1|HS267P19 Human DNA sequence from clone RP1-267P19 on chromosome 13 Contains part
             of the gene for androgen-induced prostate proliferative
             shutoff associated protein (AS3) (CG008, FLJ23236,
             KIAA0979) and two CpG islands, complete sequence
          Length = 113704

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 127   tctttttcaataatcaagat 146
             ||||||||||||||||||||
Sbjct: 56883 tctttttcaataatcaagat 56864
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>emb|AL596329.5| Human DNA sequence from clone RP11-179D6 on chromosome 13, complete
             sequence
          Length = 85563

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 270   tgggccaagtattggtgtta 289
             ||||||||||||||||||||
Sbjct: 46167 tgggccaagtattggtgtta 46186
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>emb|AL360172.17| Human DNA sequence from clone RP11-402D22 on chromosome 10 Contains the
              5' end of the variant of a novel gene, complete sequence
          Length = 188937

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 222    tcccagggacatgaatggtagcat 245
              |||||||||||||||||| |||||
Sbjct: 130156 tcccagggacatgaatggaagcat 130133
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>emb|AL773507.7| Mouse DNA sequence from clone RP23-322E14 on chromosome 4 Contains a
             phospholipase A2, group XIIA (Pla2g12) pseudogene,
             complete sequence
          Length = 200646

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 217   cttgttcccagggacatgaa 236
             ||||||||||||||||||||
Sbjct: 52895 cttgttcccagggacatgaa 52914
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>gb|AC146347.4| Pan troglodytes clone rp43-34h2, complete sequence
          Length = 157530

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 157    gatggttgagttgcaacact 176
              ||||||||||||||||||||
Sbjct: 145074 gatggttgagttgcaacact 145055
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 41     cggccgtctcgtcgacgccg 60
              ||||||||||||||||||||
Sbjct: 689554 cggccgtctcgtcgacgccg 689573



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 41     cggccgtctcgtcgacgccg 60
              ||||||||||||||||||||
Sbjct: 688368 cggccgtctcgtcgacgccg 688387
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>gb|AC090846.4| Homo sapiens chromosome 15, clone RP11-485O10, complete sequence
          Length = 93925

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   tgttctttttcaataatcaa 143
             ||||||||||||||||||||
Sbjct: 43686 tgttctttttcaataatcaa 43705
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>gb|AC007937.18| Mus musculus chromosome 10, clone RP21-536F4, complete sequence
          Length = 205015

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   tgttcccagggacatgaatg 238
             ||||||||||||||||||||
Sbjct: 63502 tgttcccagggacatgaatg 63483
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>gb|AC158618.5| Mus musculus 10 BAC RP23-280M4 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 235639

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   tgttcccagggacatgaatg 238
             ||||||||||||||||||||
Sbjct: 38041 tgttcccagggacatgaatg 38022
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>gb|AC154708.3| Mus musculus BAC clone RP24-355K5 from chromosome 14, complete sequence
          Length = 180538

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   cagtagcacccatcgagtgg 123
             ||||||||||||||||||||
Sbjct: 41790 cagtagcacccatcgagtgg 41771
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 38      gcccggccgtctcgtcgacgccgc 61
               ||||||||| ||||||||||||||
Sbjct: 3378351 gcccggccggctcgtcgacgccgc 3378374



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     tcgtcgacgccgcggaccgg 68
              ||||||||||||||||||||
Sbjct: 462169 tcgtcgacgccgcggaccgg 462150
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>gb|AC153892.12| Mus musculus 10 BAC RP23-113O12 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 197426

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 219   tgttcccagggacatgaatg 238
             ||||||||||||||||||||
Sbjct: 56272 tgttcccagggacatgaatg 56291
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>gb|AC012379.7|AC012379 Homo sapiens chromosome 15 clone RP11-485O10 map 15q21.1, complete
             sequence
          Length = 174140

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   tgttctttttcaataatcaa 143
             ||||||||||||||||||||
Sbjct: 50238 tgttctttttcaataatcaa 50219
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>gb|AC013473.8| Homo sapiens BAC clone RP11-504G5 from 2, complete sequence
          Length = 170781

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 352   agcatgaatgctgattcattcatg 375
             |||||||||| |||||||||||||
Sbjct: 60044 agcatgaatgatgattcattcatg 60067
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 38      gcccggccgtctcgtcgacg 57
               ||||||||||||||||||||
Sbjct: 1883500 gcccggccgtctcgtcgacg 1883481
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>gb|AC134903.4| Mus musculus BAC clone RP23-329A21 from chromosome 5, complete sequence
          Length = 198368

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 280    attggtgttagctctttggtgacc 303
              |||||||||||||||||| |||||
Sbjct: 175569 attggtgttagctctttgatgacc 175546
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>gb|AC157939.15| Mus musculus chromosome 3, clone RP23-51P17, complete sequence
          Length = 240367

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 276   aagtattggtgttagctctt 295
             ||||||||||||||||||||
Sbjct: 74078 aagtattggtgttagctctt 74059
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>emb|CR854964.10| Zebrafish DNA sequence from clone DKEY-58J19 in linkage group 1, complete
              sequence
          Length = 180969

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 394    atgtcattttcatccaataa 413
              ||||||||||||||||||||
Sbjct: 137933 atgtcattttcatccaataa 137914
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>gb|AC148321.7| Mus musculus BAC clone RP24-512H17 from 19, complete sequence
          Length = 210790

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 277    agtattggtgttagctcttt 296
              ||||||||||||||||||||
Sbjct: 122043 agtattggtgttagctcttt 122024
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>emb|AL353724.11| Human DNA sequence from clone RP11-448I13 on chromosome 13, complete
             sequence
          Length = 120652

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 127   tctttttcaataatcaagat 146
             ||||||||||||||||||||
Sbjct: 76028 tctttttcaataatcaagat 76009
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>emb|AL928832.7| Mouse DNA sequence from clone RP23-261N18 on chromosome 2, complete
             sequence
          Length = 198993

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   tgttctttttcaataatcaa 143
             ||||||||||||||||||||
Sbjct: 70867 tgttctttttcaataatcaa 70848
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>emb|AL732563.5| Mouse DNA sequence from clone RP23-209M8 on chromosome 4, complete
              sequence
          Length = 199818

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 277    agtattggtgttagctcttt 296
              ||||||||||||||||||||
Sbjct: 108678 agtattggtgttagctcttt 108659
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>gb|AC160723.2| Mus musculus BAC clone RP24-499G15 from chromosome 5, complete sequence
          Length = 173212

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 280   attggtgttagctctttggtgacc 303
             |||||||||||||||||| |||||
Sbjct: 51869 attggtgttagctctttgatgacc 51892


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,439,886
Number of Sequences: 3902068
Number of extensions: 4439886
Number of successful extensions: 71020
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70784
Number of HSP's gapped (non-prelim): 236
length of query: 460
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 438
effective length of database: 17,147,199,772
effective search space: 7510473500136
effective search space used: 7510473500136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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