ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl30h04 |
|---|---|
| Clone Library Name | barley_pub |
>IMB1_HUMAN (Q14974) Importin beta-1 subunit (Karyopherin beta-1 subunit)| (Nuclear factor P97) (Importin 90) Length = 876 Score = 117 bits (294), Expect = 1e-26 Identities = 61/151 (40%), Positives = 101/151 (66%) Frame = +2 Query: 11 SRRLAGIILKNSLDAKDSARKELLIQQWVSLDHSIKSQIKESLLITLGSSVGDARQTSSQ 190 +R AG+ +KNSL +KD K Q+W+++D + + ++K +L TLG+ ++SQ Sbjct: 53 ARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRP-SSASQ 111 Query: 191 VIAKIASIEIPRREWQDLIAKLLSNMTQPGASAPLKQATLEALGYVCEEIPPEHLEQDQV 370 +A IA EIP +W +LI +L++N+T P ++ +K++TLEA+GY+C++I PE L QD+ Sbjct: 112 CVAGIACAEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQL-QDKS 170 Query: 371 NAVLTAVVQGMNQTELSSEVRLAAVKLYICS 463 N +LTA++QGM + E S+ V+LAA + S Sbjct: 171 NEILTAIIQGMRKEEPSNNVKLAATNALLNS 201
>IMB1_MOUSE (P70168) Importin beta-1 subunit (Karyopherin beta-1 subunit)| (Nuclear factor P97) (Pore targeting complex 97 kDa subunit) (PTAC97) (SCG) Length = 876 Score = 117 bits (293), Expect = 2e-26 Identities = 61/151 (40%), Positives = 101/151 (66%) Frame = +2 Query: 11 SRRLAGIILKNSLDAKDSARKELLIQQWVSLDHSIKSQIKESLLITLGSSVGDARQTSSQ 190 +R AG+ +KNSL +KD K Q+W+++D + + ++K +L TLG+ ++SQ Sbjct: 53 ARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRP-SSASQ 111 Query: 191 VIAKIASIEIPRREWQDLIAKLLSNMTQPGASAPLKQATLEALGYVCEEIPPEHLEQDQV 370 +A IA EIP +W +LI +L++N+T P ++ +K++TLEA+GY+C++I PE L QD+ Sbjct: 112 CVAGIACAEIPVSQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQL-QDKS 170 Query: 371 NAVLTAVVQGMNQTELSSEVRLAAVKLYICS 463 N +LTA++QGM + E S+ V+LAA + S Sbjct: 171 NEILTAIIQGMRKEEPSNNVKLAATNALLNS 201
>IMB1_SCHPO (O13864) Importin beta-1 subunit (Karyopherin beta-1 subunit)| (Importin 95) Length = 863 Score = 112 bits (281), Expect = 4e-25 Identities = 64/147 (43%), Positives = 93/147 (63%) Frame = +2 Query: 5 PESRRLAGIILKNSLDAKDSARKELLIQQWVSLDHSIKSQIKESLLITLGSSVGDARQTS 184 P R AG+ LKN++ A++ ARK Q W SL IK Q+K L TLGSS A Q++ Sbjct: 51 PYIRMAAGLALKNAITAREEARKLEYQQLWQSLPVEIKQQVKSLALQTLGSSEHQAGQSA 110 Query: 185 SQVIAKIASIEIPRREWQDLIAKLLSNMTQPGASAPLKQATLEALGYVCEEIPPEHLEQD 364 +Q++A IA+ E+ +W DL+ L++N+ + G + LKQ +L+ +GY+CE + PE L Sbjct: 111 AQLVAAIAAYELATNQWPDLMVTLVANVGE-GQPSALKQHSLQTIGYICESVSPEVLSA- 168 Query: 365 QVNAVLTAVVQGMNQTELSSEVRLAAV 445 Q NA+LTAVV G + E + VRLAA+ Sbjct: 169 QSNAILTAVVAGARKEEPDAAVRLAAL 195
>IMB1_RAT (P52296) Importin beta-1 subunit (Karyopherin beta-1 subunit)| (Nuclear factor P97) Length = 875 Score = 107 bits (266), Expect = 2e-23 Identities = 57/149 (38%), Positives = 96/149 (64%) Frame = +2 Query: 17 RLAGIILKNSLDAKDSARKELLIQQWVSLDHSIKSQIKESLLITLGSSVGDARQTSSQVI 196 R+A + L +KD K Q+W+++D + + ++K +L TLG+ ++SQ + Sbjct: 54 RVAAGLQIRLLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRP-SSASQCV 112 Query: 197 AKIASIEIPRREWQDLIAKLLSNMTQPGASAPLKQATLEALGYVCEEIPPEHLEQDQVNA 376 A IA EIP +W +LI +L++N+T P ++ +K++TLEA+GY+C++I PE L QD+ N Sbjct: 113 AGIACAEIPVSQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQL-QDKSNE 171 Query: 377 VLTAVVQGMNQTELSSEVRLAAVKLYICS 463 +LTA++QGM + E S+ V+LAA + S Sbjct: 172 ILTAIIQGMRKEEPSNNVKLAATNALLNS 200
>IMB1_YEAST (Q06142) Importin beta-1 subunit (Karyopherin beta-1 subunit)| (Importin 95) Length = 861 Score = 89.7 bits (221), Expect = 3e-18 Identities = 58/150 (38%), Positives = 84/150 (56%), Gaps = 4/150 (2%) Frame = +2 Query: 8 ESRRLAGIILKNSLDAKDSARKELLIQQWVS-LDHSIKSQIKESLLITLGSSVGDARQTS 184 E R LA + LKN L +KDS + + Q+W++ + K+QIK + L L S + Sbjct: 56 EGRILAALTLKNELVSKDSVKTQQFAQRWITQVSPEAKNQIKTNALTALVSIEPRIANAA 115 Query: 185 SQVIAKIASIEIPRREWQDLIAKLLSNMTQPGASAP--LKQATLEALGYVCEEIPPE-HL 355 +Q+IA IA IE+P W +L+ ++ N GA P +K+A+L ALGY+CE P+ Sbjct: 116 AQLIAAIADIELPHGAWPELMKIMVDN---TGAEQPENVKRASLLALGYMCESADPQSQA 172 Query: 356 EQDQVNAVLTAVVQGMNQTELSSEVRLAAV 445 N +L A+VQG TE S VRLAA+ Sbjct: 173 LVSSSNNILIAIVQGAQSTETSKAVRLAAL 202
>IMB_DROME (O18388) Importin beta subunit (Karyopherin beta-4 subunit)| (Protein ketel) Length = 884 Score = 88.2 bits (217), Expect = 1e-17 Identities = 51/144 (35%), Positives = 82/144 (56%) Frame = +2 Query: 11 SRRLAGIILKNSLDAKDSARKELLIQQWVSLDHSIKSQIKESLLITLGSSVGDARQTSSQ 190 +R AG+ LKN L +KD + +W I+ IK ++L LG+ ++Q Sbjct: 59 ARMAAGLQLKNHLTSKDEKVSQQYQDRWHQFPSEIRELIKNNILAALGTE-NTRPSCAAQ 117 Query: 191 VIAKIASIEIPRREWQDLIAKLLSNMTQPGASAPLKQATLEALGYVCEEIPPEHLEQDQV 370 +A +A IE+P W LI L++ + G+S +++ LEA+GY+C++I +E +Q Sbjct: 118 CVAYVAVIELPINRWPMLIQTLVNKVVSEGSSEMHRESALEAIGYICQDIRFGVME-NQS 176 Query: 371 NAVLTAVVQGMNQTELSSEVRLAA 442 N VLTA++ GM + E S+ VRLAA Sbjct: 177 NDVLTAIIHGMRKVEPSNHVRLAA 200
>IMB4_SCHPO (O60100) Probable importin beta-4 subunit (Karyopherin beta-4| subunit) (Importin 123) Length = 1067 Score = 42.7 bits (99), Expect = 5e-04 Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 2/149 (1%) Frame = +2 Query: 5 PESRRLAGIILKNSLDAKDSARKELLIQQWVSLDHSIKSQIKESLL-ITLGSSVGDARQT 181 P+ R+LA I ARK L + W S+D +++QI+ +LL ITL R Sbjct: 55 PQVRQLAAI----------EARK-LCHKYWSSVDADVQNQIRSNLLDITLKEPESIVRHA 103 Query: 182 SSQVIAKIASIEIPRREWQDLIAKLLSNMTQPGASAPLKQATLEALGYVCEEIPPEH-LE 358 +VIA +A +++P +W +L A L+ S +++ + L + E + ++ L Sbjct: 104 FGRVIAALAKLDLPEGKWNELSAFLVQATMDQNDS--IREMAVYVLYSIAETVDLDNKLL 161 Query: 359 QDQVNAVLTAVVQGMNQTELSSEVRLAAV 445 D VN + ++S L A+ Sbjct: 162 LDFVNLFSQTITDSSRTVRVTSVQGLGAI 190
>IMB4_YEAST (P40069) Importin beta-4 subunit (Karyopherin beta-4 subunit)| (Ran-binding protein YRB4) Length = 1113 Score = 42.4 bits (98), Expect = 6e-04 Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 1/90 (1%) Frame = +2 Query: 71 KELLIQQWVSLDHSIKSQIKESLLITLGSSVGD-ARQTSSQVIAKIASIEIPRREWQDLI 247 ++L+ + W ++D S ++ IK SLL T S + R ++++VIA I + E+ +W DL+ Sbjct: 64 RKLVSKHWNAIDESTRASIKTSLLQTAFSEPKENVRHSNARVIASIGTEELDGNKWPDLV 123 Query: 248 AKLLSNMTQPGASAPLKQATLEALGYVCEE 337 L+ T G +Q + L + E+ Sbjct: 124 PNLI--QTASGEDVQTRQTAIFILFSLLED 151
>TNPO1_MOUSE (Q8BFY9) Transportin-1 (Importin beta-2) (Karyopherin beta-2)| Length = 890 Score = 32.7 bits (73), Expect = 0.49 Identities = 33/128 (25%), Positives = 57/128 (44%) Frame = +2 Query: 11 SRRLAGIILKNSLDAKDSARKELLIQQWVSLDHSIKSQIKESLLITLGSSVGDARQTSSQ 190 +R L+G+ILKN++ A + + + + IK L +G S R T Sbjct: 64 TRSLSGLILKNNVKA-----------HFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGI 112 Query: 191 VIAKIASIEIPRREWQDLIAKLLSNMTQPGASAPLKQATLEALGYVCEEIPPEHLEQDQV 370 +I IAS + + W DL+ KL S + + + AL +CE+ E L+ D + Sbjct: 113 LITTIAS-KGELQNWPDLLPKLCSLLDSEDYNT--CEGAFGALQKICED-SAEILDSDVL 168 Query: 371 NAVLTAVV 394 + L ++ Sbjct: 169 DRPLNIMI 176
>TNPO1_HUMAN (Q92973) Transportin-1 (Importin beta-2) (Karyopherin beta-2) (M9| region interaction protein) (MIP) Length = 890 Score = 32.7 bits (73), Expect = 0.49 Identities = 33/128 (25%), Positives = 57/128 (44%) Frame = +2 Query: 11 SRRLAGIILKNSLDAKDSARKELLIQQWVSLDHSIKSQIKESLLITLGSSVGDARQTSSQ 190 +R L+G+ILKN++ A + + + + IK L +G S R T Sbjct: 64 TRSLSGLILKNNVKA-----------HFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGI 112 Query: 191 VIAKIASIEIPRREWQDLIAKLLSNMTQPGASAPLKQATLEALGYVCEEIPPEHLEQDQV 370 +I IAS + + W DL+ KL S + + + AL +CE+ E L+ D + Sbjct: 113 LITTIAS-KGELQNWPDLLPKLCSLLDSEDYNT--CEGAFGALQKICED-SAEILDSDVL 168 Query: 371 NAVLTAVV 394 + L ++ Sbjct: 169 DRPLNIMI 176
>SUV92_HUMAN (Q9H5I1) Histone-lysine N-methyltransferase, H3 lysine-9 specific 2| (EC 2.1.1.43) (Histone H3-K9 methyltransferase 2) (H3-K9-HMTase 2) (Suppressor of variegation 3-9 homolog 2) (Su(var)3-9 homolog 2) Length = 410 Score = 30.8 bits (68), Expect = 1.9 Identities = 18/67 (26%), Positives = 33/67 (49%) Frame = +2 Query: 41 NSLDAKDSARKELLIQQWVSLDHSIKSQIKESLLITLGSSVGDARQTSSQVIAKIASIEI 220 N+ + + + LL+QQ+ + H+ SQ+K+ IT + + ++ I K A I Sbjct: 76 NTWEPLQNLKCPLLLQQFSNDKHNYLSQVKKGKAITPKDNNKTLKPAIAEYIVKKAKQRI 135 Query: 221 PRREWQD 241 + WQD Sbjct: 136 ALQRWQD 142
>TNPO2_HUMAN (O14787) Transportin-2 (Karyopherin beta-2b)| Length = 897 Score = 30.8 bits (68), Expect = 1.9 Identities = 31/128 (24%), Positives = 57/128 (44%) Frame = +2 Query: 11 SRRLAGIILKNSLDAKDSARKELLIQQWVSLDHSIKSQIKESLLITLGSSVGDARQTSSQ 190 +R L+G+ILKN++ A + S + IK+ L +G + R T Sbjct: 62 TRSLSGLILKNNVKA-----------HYQSFPPPVADFIKQECLNNIGDASSLIRATIGI 110 Query: 191 VIAKIASIEIPRREWQDLIAKLLSNMTQPGASAPLKQATLEALGYVCEEIPPEHLEQDQV 370 +I IAS + + W +L+ +L + + + + AL +CE+ E L+ D + Sbjct: 111 LITTIAS-KGELQMWPELLPQLCNLLNSEDYNT--CEGAFGALQKICED-SSELLDSDAL 166 Query: 371 NAVLTAVV 394 N L ++ Sbjct: 167 NRPLNIMI 174
>TNPO2_MOUSE (Q99LG2) Transportin-2 (Karyopherin beta-2b)| Length = 887 Score = 30.8 bits (68), Expect = 1.9 Identities = 31/128 (24%), Positives = 57/128 (44%) Frame = +2 Query: 11 SRRLAGIILKNSLDAKDSARKELLIQQWVSLDHSIKSQIKESLLITLGSSVGDARQTSSQ 190 +R L+G+ILKN++ A + S + IK+ L +G + R T Sbjct: 62 TRSLSGLILKNNVKA-----------HYQSFPPPVADFIKQECLNNIGDASSLIRATIGI 110 Query: 191 VIAKIASIEIPRREWQDLIAKLLSNMTQPGASAPLKQATLEALGYVCEEIPPEHLEQDQV 370 +I IAS + + W +L+ +L + + + + AL +CE+ E L+ D + Sbjct: 111 LITTIAS-KGELQMWPELLPQLCNLLNSEDYNT--CEGAFGALQKICED-SSELLDSDAL 166 Query: 371 NAVLTAVV 394 N L ++ Sbjct: 167 NRPLNIMI 174
>DTD_AQUAE (O66742) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)| Length = 148 Score = 30.4 bits (67), Expect = 2.4 Identities = 13/45 (28%), Positives = 23/45 (51%) Frame = +2 Query: 86 QQWVSLDHSIKSQIKESLLITLGSSVGDARQTSSQVIAKIASIEI 220 + WV +D + I E L + LG GD + +++ KI ++ I Sbjct: 10 KSWVEVDGKVVGSINEGLNVFLGVRKGDTEEDIEKLVNKILNLRI 54
>HSP7F_YEAST (P32589) Heat shock protein homolog SSE1 (Chaperone protein MSI3)| Length = 692 Score = 30.4 bits (67), Expect = 2.4 Identities = 15/51 (29%), Positives = 26/51 (50%) Frame = +2 Query: 293 LKQATLEALGYVCEEIPPEHLEQDQVNAVLTAVVQGMNQTELSSEVRLAAV 445 +KQ T + VC +PP + E+ + N A + G+N + ++V A V Sbjct: 129 VKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGV 179
>NCKPL_HUMAN (P55160) Nck-associated protein 1-like (Membrane-associated protein| HEM-1) (Hematopoietic protein 1) Length = 1127 Score = 29.6 bits (65), Expect = 4.1 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 2/89 (2%) Frame = +2 Query: 80 LIQQWVSLDHSIKSQIKESLLITLGSSVGDARQTSSQVIAKIASIEIPRREWQDLIAKLL 259 LI++ V H + + SL G V D +++ VIA RR++ + K L Sbjct: 293 LIREDVLQVHKVTEDLFSSLK-GYGKRVADIKESKEHVIANSGQFHCQRRQFLRMAVKEL 351 Query: 260 SNM--TQPGASAPLKQATLEALGYVCEEI 340 + +PG P AL ++ +E+ Sbjct: 352 ETVLADEPGLLGPKALFAFMALSFIRDEV 380
>HISX_NITEU (Q82W26) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)| Length = 432 Score = 29.3 bits (64), Expect = 5.4 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 4/76 (5%) Frame = +2 Query: 41 NSLDAKDSARKELLIQQWVSLDHSIKSQIKESL--LITLGSS--VGDARQTSSQVIAKIA 208 +S+D A + L+ VS+D I+ + + L + T G + RQ + I +I Sbjct: 8 SSVDDHFQAELDQLLSFEVSVDSEIERTVTQILHQIRTHGDRALLELTRQFDNPDIDRIE 67 Query: 209 SIEIPRREWQDLIAKL 256 IE+PR EWQ + L Sbjct: 68 EIELPRDEWQSALMSL 83
>HERC2_DROME (Q9VR91) HECT domain and RCC1-like domain-containing protein 2| Length = 4912 Score = 29.3 bits (64), Expect = 5.4 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 2/86 (2%) Frame = +2 Query: 143 ITLGSSVGD-ARQTSSQVIAKIASIEIPRRE-WQDLIAKLLSNMTQPGASAPLKQATLEA 316 + LG S G A S V +K +++ P + WQ I ++ +QP + ATL + Sbjct: 2733 LRLGRSQGSSAIGVVSSVRSKQLTVDFPDQPAWQGHINEVELVASQPTS------ATLPS 2786 Query: 317 LGYVCEEIPPEHLEQDQVNAVLTAVV 394 LG C ++PP L +D + + V Sbjct: 2787 LGDSCSQMPPSDLIEDWSRCIRSLTV 2812
>COFD_MYCTU (P96866) LPPG:FO 2-phopspho-L-lactate transferase (EC 2.7.1.-)| Length = 331 Score = 29.3 bits (64), Expect = 5.4 Identities = 21/92 (22%), Positives = 42/92 (45%) Frame = +2 Query: 50 DAKDSARKELLIQQWVSLDHSIKSQIKESLLITLGSSVGDARQTSSQVIAKIASIEIPRR 229 D D +RK + Q+W ++Q+ +G+ A +++ IA +A +I Sbjct: 158 DPVDESRKAIHFQEWWV---RYRAQVPTHSFAFVGAEKSSA---ATEAIAALADADIIML 211 Query: 230 EWQDLIAKLLSNMTQPGASAPLKQATLEALGY 325 + + + + + PG A L++AT +GY Sbjct: 212 APSNPVVSIGAILAVPGIRAALREATAPIVGY 243
>COFD_MYCBO (Q7TWV4) LPPG:FO 2-phopspho-L-lactate transferase (EC 2.7.1.-)| Length = 331 Score = 29.3 bits (64), Expect = 5.4 Identities = 21/92 (22%), Positives = 42/92 (45%) Frame = +2 Query: 50 DAKDSARKELLIQQWVSLDHSIKSQIKESLLITLGSSVGDARQTSSQVIAKIASIEIPRR 229 D D +RK + Q+W ++Q+ +G+ A +++ IA +A +I Sbjct: 158 DPVDESRKAIHFQEWWV---RYRAQVPTHSFAFVGAEKSSA---ATEAIAALADADIIML 211 Query: 230 EWQDLIAKLLSNMTQPGASAPLKQATLEALGY 325 + + + + + PG A L++AT +GY Sbjct: 212 APSNPVVSIGAILAVPGIRAALREATAPIVGY 243
>HEATR_HUMAN (Q9H583) HEAT repeat-containing protein 1 (Protein BAP28)| Length = 2144 Score = 28.9 bits (63), Expect = 7.1 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +2 Query: 110 SIKSQIKESLLITLGSSVGDARQTSSQVIAKIASIEIP 223 SI S + SLLI LGS V + R+ + Q + ++ + P Sbjct: 914 SISSPVVTSLLINLGSPVKEVRRAAIQCLQALSGVASP 951
>FUTSC_DROME (Q9W596) Microtubule-associated protein futsch| Length = 5412 Score = 28.9 bits (63), Expect = 7.1 Identities = 17/49 (34%), Positives = 24/49 (48%) Frame = +2 Query: 35 LKNSLDAKDSARKELLIQQWVSLDHSIKSQIKESLLITLGSSVGDARQT 181 LK A S +ELL+Q SI S+I+ S+ + DAR+T Sbjct: 4518 LKEDTSASASQLEELLVQSEECSSESIVSEIQTSIAQKSNKEIKDARET 4566
>IPO11_MOUSE (Q8K2V6) Importin-11 (Imp11) (Ran-binding protein 11) (RanBP11)| Length = 975 Score = 28.9 bits (63), Expect = 7.1 Identities = 14/57 (24%), Positives = 29/57 (50%) Frame = +2 Query: 98 SLDHSIKSQIKESLLITLGSSVGDARQTSSQVIAKIASIEIPRREWQDLIAKLLSNM 268 +L KS ++ L+ + + +IAK+A ++ P R+W +LI L+ ++ Sbjct: 81 ALSEEEKSTLRAGLITNFNEPINQIATQIAVLIAKVARLDCP-RQWPELIPTLVESV 136
>TRPF_ANASP (Q8YLL0) N-(5'-phosphoribosyl)anthranilate isomerase (EC 5.3.1.24)| (PRAI) Length = 217 Score = 28.5 bits (62), Expect = 9.2 Identities = 12/63 (19%), Positives = 30/63 (47%) Frame = +2 Query: 257 LSNMTQPGASAPLKQATLEALGYVCEEIPPEHLEQDQVNAVLTAVVQGMNQTELSSEVRL 436 + +TQP S + ALG++C P ++ Q+ +T + + +++ + + + Sbjct: 5 ICGITQPQQSVAIASLGATALGFICVPSSPRYVTAGQIRDAVTPLPENIDKIGVFANSSI 64 Query: 437 AAV 445 A + Sbjct: 65 AEI 67
>G3P_CLOPA (Q59309) Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)| (GAPDH) (CP 17/CP 18) Length = 334 Score = 28.5 bits (62), Expect = 9.2 Identities = 14/43 (32%), Positives = 24/43 (55%) Frame = +2 Query: 212 IEIPRREWQDLIAKLLSNMTQPGASAPLKQATLEALGYVCEEI 340 + +P +LI+ L N+T +A +K+A E+ GY +EI Sbjct: 234 VPVPTGSVTELISVLKKNVTVEEINAAMKEAANESFGYTEDEI 276 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,798,160 Number of Sequences: 219361 Number of extensions: 1049895 Number of successful extensions: 3163 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 3084 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3149 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
