ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl30h04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome... 450 e-123
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 450 e-123
3dbj|AK065625.1| Oryza sativa (japonica cultivar-group) cDNA clon... 450 e-123
4dbj|AB011270.1| Oryza sativa (japonica cultivar-group) mRNA for ... 450 e-123
5emb|Y15226.1|OSIMPB2 Oryza sativa mRNA for importin beta-like pr... 442 e-121
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 86 1e-13
7gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare str... 86 1e-13
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
9gb|AC010871.7|ATAC010871 Arabidopsis thaliana chromosome III BAC... 42 1.6
10emb|AL513487.3| Human DNA sequence from clone RP13-63I15 on chro... 42 1.6
11emb|AL021918.1|HS34I8 Human DNA sequence from clone XXbac-34I8 o... 42 1.6
12gb|AC010748.5| Homo sapiens BAC clone CTD-2532L16 from 16, compl... 42 1.6
13emb|BX824687.1|CNS0A7D7 Arabidopsis thaliana Full-length cDNA Co... 42 1.6
14gb|AF020583.1|AF020583 Zamia furfuracea cytochrome c oxidase (co... 42 1.6
15gb|AF020577.1|AF020577 Stangeria eriopus cytochrome c oxidase (c... 42 1.6
16gb|AF020563.1|AF020563 Encephalartos lebomboensis cytochrome c o... 42 1.6
17gb|AF020562.1|AF020562 Cycas revoluta cytochrome c oxidase (coxI... 42 1.6
18ref|NM_128404.1| Arabidopsis thaliana unknown protein AT2G28440 ... 40 6.4
19gb|AC156936.5| Mus musculus BAC clone RP24-90K8 from chromosome ... 40 6.4
20gb|AC140208.2| Mus musculus BAC clone RP24-469B21 from chromosom... 40 6.4
21gb|AF090216.1| Uncultured archaeon 'Norris Geyer Basin #16' reco... 40 6.4
22gb|AF090212.1| Uncultured archaeon 'Norris Geyer Basin #8' recom... 40 6.4
23gb|AF090210.1| Uncultured archaeon 'Norris Geyer Basin #4' recom... 40 6.4
24emb|AL138785.8| Human DNA sequence from clone RP4-604A21 on chro... 40 6.4
25emb|AL606656.3|OSJN00099 Oryza sativa genomic DNA, chromosome 4,... 40 6.4
26gb|DQ056548.1| Arabidopsis thaliana proline-rich family protein ... 40 6.4
27gb|AC006283.6| Arabidopsis thaliana chromosome 2 clone T1B3 map ... 40 6.4
28ref|XM_686271.1| PREDICTED: Danio rerio similar to Putative aden... 40 6.4
29gb|AC022446.6| Homo sapiens chromosome 5 clone RP11-5H13, comple... 40 6.4
30dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
31gb|AC154252.1| Mus musculus BAC clone RP24-197M20 from chromosom... 40 6.4
32gb|AC150476.3| Dasypus novemcinctus clone VMRC5-421E14, complete... 40 6.4
33dbj|AK105982.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
34emb|AL139353.3|CNS01DXJ Human chromosome 14 DNA sequence BAC R-1... 40 6.4
35emb|AL591582.32| Mouse DNA sequence from clone RP23-403P3 on chr... 40 6.4
36emb|AL672148.8| Mouse DNA sequence from clone RP23-369O15 on chr... 40 6.4
37emb|AL831792.6| Mouse DNA sequence from clone RP23-379L17 on chr... 40 6.4
38emb|AL732480.12| Mouse DNA sequence from clone RP23-11N21 on chr... 40 6.4 
>gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1320_D10,
             complete sequence
          Length = 134183

 Score =  450 bits (227), Expect = e-123
 Identities = 389/443 (87%)
 Strand = Plus / Plus

                                                                         
Query: 2     ccaccagagtctagaagacttgctggtattatccttaagaattcactggacgcaaaagat 61
             ||||||||||||||| ||||||||||||||||||||||||| ||  |||| ||||| |||
Sbjct: 62033 ccaccagagtctagacgacttgctggtattatccttaagaactccttggatgcaaaggat 62092

                                                                         
Query: 62    tctgcaaggaaggagctgctgattcagcaatgggtcagcttggatcactcgatcaaatcg 121
             |||||||  ||||| || ||||||||||||||||||||| ||||||  || ||||||  |
Sbjct: 62093 tctgcaaaaaaggaactactgattcagcaatgggtcagcctggatccatcaatcaaacag 62152

                                                                         
Query: 122   cagattaaggagtcattgctgataacactaggatcttcggtgggtgatgcccggcagacg 181
              |||| |||||||| ||||||||||| |||||||||||||||  ||||||  |||| || 
Sbjct: 62153 aagataaaggagtccttgctgataacgctaggatcttcggtgcatgatgctaggcatacc 62212

                                                                         
Query: 182   tcatcacaagtcattgcaaagattgcatccattgagataccccgtcgggaatggcaagac 241
             ||||||||||||||||| ||| |||||||||||||||| ||||| || ||||||||||| 
Sbjct: 62213 tcatcacaagtcattgccaaggttgcatccattgagatcccccggcgtgaatggcaagaa 62272

                                                                         
Query: 242   ctcattgccaaattgctgagcaacatgactcagcctggggcctctgcgccactaaagcaa 301
             ||||||||||||||  || |||||||||| || |  || ||  |||| ||||||||||||
Sbjct: 62273 ctcattgccaaattattgggcaacatgacacaacagggtgcacctgctccactaaagcaa 62332

                                                                         
Query: 302   gcaactctagaagcattggggtatgtctgtgaggagattcctcctgagcacttggagcag 361
             ||||||||||| || || ||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 62333 gcaactctagaggccttagggtatgtctgtgaggagatttctcctgaacacttggagcag 62392

                                                                         
Query: 362   gatcaagtgaatgctgttctgactgctgtggttcaggggatgaaccagacagagctaagc 421
             ||||| |||||||||||||| |||||||| || ||||| |||||||||||||||||||||
Sbjct: 62393 gatcaggtgaatgctgttctaactgctgttgtccagggaatgaaccagacagagctaagc 62452

                                    
Query: 422   tctgaagtccgtcttgcagcagt 444
              ||||||||||||||||||||||
Sbjct: 62453 cctgaagtccgtcttgcagcagt 62475
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  450 bits (227), Expect = e-123
 Identities = 389/443 (87%)
 Strand = Plus / Plus

                                                                            
Query: 2        ccaccagagtctagaagacttgctggtattatccttaagaattcactggacgcaaaagat 61
                ||||||||||||||| ||||||||||||||||||||||||| ||  |||| ||||| |||
Sbjct: 16563294 ccaccagagtctagacgacttgctggtattatccttaagaactccttggatgcaaaggat 16563353

                                                                            
Query: 62       tctgcaaggaaggagctgctgattcagcaatgggtcagcttggatcactcgatcaaatcg 121
                |||||||  ||||| || ||||||||||||||||||||| ||||||  || ||||||  |
Sbjct: 16563354 tctgcaaaaaaggaactactgattcagcaatgggtcagcctggatccatcaatcaaacag 16563413

                                                                            
Query: 122      cagattaaggagtcattgctgataacactaggatcttcggtgggtgatgcccggcagacg 181
                 |||| |||||||| ||||||||||| |||||||||||||||  ||||||  |||| || 
Sbjct: 16563414 aagataaaggagtccttgctgataacgctaggatcttcggtgcatgatgctaggcatacc 16563473

                                                                            
Query: 182      tcatcacaagtcattgcaaagattgcatccattgagataccccgtcgggaatggcaagac 241
                ||||||||||||||||| ||| |||||||||||||||| ||||| || ||||||||||| 
Sbjct: 16563474 tcatcacaagtcattgccaaggttgcatccattgagatcccccggcgtgaatggcaagaa 16563533

                                                                            
Query: 242      ctcattgccaaattgctgagcaacatgactcagcctggggcctctgcgccactaaagcaa 301
                ||||||||||||||  || |||||||||| || |  || ||  |||| ||||||||||||
Sbjct: 16563534 ctcattgccaaattattgggcaacatgacacaacagggtgcacctgctccactaaagcaa 16563593

                                                                            
Query: 302      gcaactctagaagcattggggtatgtctgtgaggagattcctcctgagcacttggagcag 361
                ||||||||||| || || ||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 16563594 gcaactctagaggccttagggtatgtctgtgaggagatttctcctgaacacttggagcag 16563653

                                                                            
Query: 362      gatcaagtgaatgctgttctgactgctgtggttcaggggatgaaccagacagagctaagc 421
                ||||| |||||||||||||| |||||||| || ||||| |||||||||||||||||||||
Sbjct: 16563654 gatcaggtgaatgctgttctaactgctgttgtccagggaatgaaccagacagagctaagc 16563713

                                       
Query: 422      tctgaagtccgtcttgcagcagt 444
                 ||||||||||||||||||||||
Sbjct: 16563714 cctgaagtccgtcttgcagcagt 16563736
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>dbj|AK065625.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013029L11, full
           insert sequence
          Length = 3150

 Score =  450 bits (227), Expect = e-123
 Identities = 389/443 (87%)
 Strand = Plus / Plus

                                                                       
Query: 2   ccaccagagtctagaagacttgctggtattatccttaagaattcactggacgcaaaagat 61
           ||||||||||||||| ||||||||||||||||||||||||| ||  |||| ||||| |||
Sbjct: 441 ccaccagagtctagacgacttgctggtattatccttaagaactccttggatgcaaaggat 500

                                                                       
Query: 62  tctgcaaggaaggagctgctgattcagcaatgggtcagcttggatcactcgatcaaatcg 121
           |||||||  ||||| || ||||||||||||||||||||| ||||||  || ||||||  |
Sbjct: 501 tctgcaaaaaaggaactactgattcagcaatgggtcagcctggatccatcaatcaaacag 560

                                                                       
Query: 122 cagattaaggagtcattgctgataacactaggatcttcggtgggtgatgcccggcagacg 181
            |||| |||||||| ||||||||||| |||||||||||||||  ||||||  |||| || 
Sbjct: 561 aagataaaggagtccttgctgataacgctaggatcttcggtgcatgatgctaggcatacc 620

                                                                       
Query: 182 tcatcacaagtcattgcaaagattgcatccattgagataccccgtcgggaatggcaagac 241
           ||||||||||||||||| ||| |||||||||||||||| ||||| || ||||||||||| 
Sbjct: 621 tcatcacaagtcattgccaaggttgcatccattgagatcccccggcgtgaatggcaagaa 680

                                                                       
Query: 242 ctcattgccaaattgctgagcaacatgactcagcctggggcctctgcgccactaaagcaa 301
           ||||||||||||||  || |||||||||| || |  || ||  |||| ||||||||||||
Sbjct: 681 ctcattgccaaattattgggcaacatgacacaacagggtgcacctgctccactaaagcaa 740

                                                                       
Query: 302 gcaactctagaagcattggggtatgtctgtgaggagattcctcctgagcacttggagcag 361
           ||||||||||| || || ||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 741 gcaactctagaggccttagggtatgtctgtgaggagatttctcctgaacacttggagcag 800

                                                                       
Query: 362 gatcaagtgaatgctgttctgactgctgtggttcaggggatgaaccagacagagctaagc 421
           ||||| |||||||||||||| |||||||| || ||||| |||||||||||||||||||||
Sbjct: 801 gatcaggtgaatgctgttctaactgctgttgtccagggaatgaaccagacagagctaagc 860

                                  
Query: 422 tctgaagtccgtcttgcagcagt 444
            ||||||||||||||||||||||
Sbjct: 861 cctgaagtccgtcttgcagcagt 883
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>dbj|AB011270.1| Oryza sativa (japonica cultivar-group) mRNA for importin-beta1,
           complete cds
          Length = 3115

 Score =  450 bits (227), Expect = e-123
 Identities = 389/443 (87%)
 Strand = Plus / Plus

                                                                       
Query: 2   ccaccagagtctagaagacttgctggtattatccttaagaattcactggacgcaaaagat 61
           ||||||||||||||| ||||||||||||||||||||||||| ||  |||| ||||| |||
Sbjct: 401 ccaccagagtctagacgacttgctggtattatccttaagaactccttggatgcaaaggat 460

                                                                       
Query: 62  tctgcaaggaaggagctgctgattcagcaatgggtcagcttggatcactcgatcaaatcg 121
           |||||||  ||||| || ||||||||||||||||||||| ||||||  || ||||||  |
Sbjct: 461 tctgcaaaaaaggaactactgattcagcaatgggtcagcctggatccatcaatcaaacag 520

                                                                       
Query: 122 cagattaaggagtcattgctgataacactaggatcttcggtgggtgatgcccggcagacg 181
            |||| |||||||| ||||||||||| |||||||||||||||  ||||||  |||| || 
Sbjct: 521 aagataaaggagtccttgctgataacgctaggatcttcggtgcatgatgctaggcatacc 580

                                                                       
Query: 182 tcatcacaagtcattgcaaagattgcatccattgagataccccgtcgggaatggcaagac 241
           ||||||||||||||||| ||| |||||||||||||||| ||||| || ||||||||||| 
Sbjct: 581 tcatcacaagtcattgccaaggttgcatccattgagatcccccggcgtgaatggcaagaa 640

                                                                       
Query: 242 ctcattgccaaattgctgagcaacatgactcagcctggggcctctgcgccactaaagcaa 301
           ||||||||||||||  || |||||||||| || |  || ||  |||| ||||||||||||
Sbjct: 641 ctcattgccaaattattgggcaacatgacacaacagggtgcacctgctccactaaagcaa 700

                                                                       
Query: 302 gcaactctagaagcattggggtatgtctgtgaggagattcctcctgagcacttggagcag 361
           ||||||||||| || || ||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 701 gcaactctagaggccttagggtatgtctgtgaggagatttctcctgaacacttggagcag 760

                                                                       
Query: 362 gatcaagtgaatgctgttctgactgctgtggttcaggggatgaaccagacagagctaagc 421
           ||||| |||||||||||||| |||||||| || ||||| |||||||||||||||||||||
Sbjct: 761 gatcaggtgaatgctgttctaactgctgttgtccagggaatgaaccagacagagctaagc 820

                                  
Query: 422 tctgaagtccgtcttgcagcagt 444
            ||||||||||||||||||||||
Sbjct: 821 cctgaagtccgtcttgcagcagt 843
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>emb|Y15226.1|OSIMPB2 Oryza sativa mRNA for importin beta-like protein Imb2
          Length = 2838

 Score =  442 bits (223), Expect = e-121
 Identities = 388/443 (87%)
 Strand = Plus / Plus

                                                                       
Query: 2   ccaccagagtctagaagacttgctggtattatccttaagaattcactggacgcaaaagat 61
           ||||||||||||||| ||||||||||||||||||||||||| ||  |||| ||||| |||
Sbjct: 137 ccaccagagtctagacgacttgctggtattatccttaagaactccttggatgcaaaggat 196

                                                                       
Query: 62  tctgcaaggaaggagctgctgattcagcaatgggtcagcttggatcactcgatcaaatcg 121
           |||||||  ||||| || ||||||||||||||||||||| ||||||  || ||||||  |
Sbjct: 197 tctgcaaaaaaggaactactgattcagcaatgggtcagcctggatccatcaatcaaacag 256

                                                                       
Query: 122 cagattaaggagtcattgctgataacactaggatcttcggtgggtgatgcccggcagacg 181
            |||| |||||||| ||||||||||| |||||||||||||||  ||||||  |||| || 
Sbjct: 257 aagataaaggagtccttgctgataacgctaggatcttcggtgcatgatgctaggcatacc 316

                                                                       
Query: 182 tcatcacaagtcattgcaaagattgcatccattgagataccccgtcgggaatggcaagac 241
           ||||||||||||||||| ||| |||||||||||||||| ||||| || ||||||||| | 
Sbjct: 317 tcatcacaagtcattgccaaggttgcatccattgagatcccccggcgtgaatggcaacaa 376

                                                                       
Query: 242 ctcattgccaaattgctgagcaacatgactcagcctggggcctctgcgccactaaagcaa 301
           ||||||||||||||  || |||||||||| || |  || ||  |||| ||||||||||||
Sbjct: 377 ctcattgccaaattattgggcaacatgacacaacagggtgcacctgctccactaaagcaa 436

                                                                       
Query: 302 gcaactctagaagcattggggtatgtctgtgaggagattcctcctgagcacttggagcag 361
           ||||||||||| || || ||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 437 gcaactctagaggccttagggtatgtctgtgaggagatttctcctgaacacttggagcag 496

                                                                       
Query: 362 gatcaagtgaatgctgttctgactgctgtggttcaggggatgaaccagacagagctaagc 421
           ||||| |||||||||||||| |||||||| || ||||| |||||||||||||||||||||
Sbjct: 497 gatcaggtgaatgctgttctaactgctgttgtccagggaatgaaccagacagagctaagc 556

                                  
Query: 422 tctgaagtccgtcttgcagcagt 444
            ||||||||||||||||||||||
Sbjct: 557 cctgaagtccgtcttgcagcagt 579
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                            
Query: 323      tatgtctgtgaggagattcctcctgagcacttggagcaggatcaagtgaatgctgttctg 382
                |||||||||||||||||  | |||||| | ||||| ||||||||||| ||||||||||| 
Sbjct: 10254536 tatgtctgtgaggagatatcccctgaggatttggaacaggatcaagttaatgctgttctt 10254477

                                       
Query: 383      actgctgtggttcaggggatgaa 405
                ||||||||||| ||||| |||||
Sbjct: 10254476 actgctgtggtccagggtatgaa 10254454



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                              
Query: 15       gaagacttgctggtattatccttaagaattcactggacgcaaaaga 60
                |||| |||||||||||| | |||||||||||  |||| ||||||||
Sbjct: 10254844 gaaggcttgctggtattttgcttaagaattccttggatgcaaaaga 10254799
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>gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0045E22, from chromosome 3, complete sequence
          Length = 160920

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                          
Query: 323    tatgtctgtgaggagattcctcctgagcacttggagcaggatcaagtgaatgctgttctg 382
              |||||||||||||||||  | |||||| | ||||| ||||||||||| ||||||||||| 
Sbjct: 115949 tatgtctgtgaggagatatcccctgaggatttggaacaggatcaagttaatgctgttctt 115890

                                     
Query: 383    actgctgtggttcaggggatgaa 405
              ||||||||||| ||||| |||||
Sbjct: 115889 actgctgtggtccagggtatgaa 115867



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                            
Query: 15     gaagacttgctggtattatccttaagaattcactggacgcaaaaga 60
              |||| |||||||||||| | |||||||||||  |||| ||||||||
Sbjct: 116257 gaaggcttgctggtattttgcttaagaattccttggatgcaaaaga 116212
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                            
Query: 323      tatgtctgtgaggagattcctcctgagcacttggagcaggatcaagtgaatgctgttctg 382
                |||||||||||||||||  | |||||| | ||||| ||||||||||| ||||||||||| 
Sbjct: 10252637 tatgtctgtgaggagatatcccctgaggatttggaacaggatcaagttaatgctgttctt 10252578

                                       
Query: 383      actgctgtggttcaggggatgaa 405
                ||||||||||| ||||| |||||
Sbjct: 10252577 actgctgtggtccagggtatgaa 10252555



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                              
Query: 15       gaagacttgctggtattatccttaagaattcactggacgcaaaaga 60
                |||| |||||||||||| | |||||||||||  |||| ||||||||
Sbjct: 10252945 gaaggcttgctggtattttgcttaagaattccttggatgcaaaaga 10252900
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>gb|AC010871.7|ATAC010871 Arabidopsis thaliana chromosome III BAC T16O11 genomic sequence,
             complete sequence
          Length = 80381

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 38    aagaattcactggacgcaaaagattctgc 66
             |||||||| |||||||| |||||||||||
Sbjct: 34823 aagaattctctggacgccaaagattctgc 34851



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 38    aagaattcactggacgcaaaagattctgc 66
             |||||||| |||||||| |||||||||||
Sbjct: 32349 aagaattctctggacgccaaagattctgc 32321
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>emb|AL513487.3| Human DNA sequence from clone RP13-63I15 on chromosome Xq24-26.2,
             complete sequence
          Length = 144177

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 186   cacaagtcattgcaaagattgcatc 210
             |||||||||| ||||||||||||||
Sbjct: 13183 cacaagtcatagcaaagattgcatc 13159
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>emb|AL021918.1|HS34I8 Human DNA sequence from clone XXbac-34I8 on chromosome 6p21.3-22.1
              Contains the 5' end of the ZNF184 gene for Kruppel-like
              zinc finger protein 184, a heterogeneous nuclear
              ribonucleoprotein A1 (HNRPA1) pseudogene, a CD83 antigen
              pseudogene, ESTs, STSs, GSSs and three CpG islands,
              complete sequence
          Length = 159506

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 320    gggtatgtctgtgaggagatt 340
              |||||||||||||||||||||
Sbjct: 114026 gggtatgtctgtgaggagatt 114046
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>gb|AC010748.5| Homo sapiens BAC clone CTD-2532L16 from 16, complete sequence
          Length = 145459

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 372   atgctgttctgactgctgtgg 392
             |||||||||||||||||||||
Sbjct: 14338 atgctgttctgactgctgtgg 14318
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>emb|BX824687.1|CNS0A7D7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH64ZE06 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2944

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 38  aagaattcactggacgcaaaagattctgc 66
           |||||||| |||||||| |||||||||||
Sbjct: 352 aagaattctctggacgccaaagattctgc 380
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>gb|AF020583.1|AF020583 Zamia furfuracea cytochrome c oxidase (coxI) gene, mitochondrial
           gene encoding mitochondrial protein, partial cds
          Length = 1415

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 72  aggagctgctgattcagcaat 92
           |||||||||||||||||||||
Sbjct: 326 aggagctgctgattcagcaat 346
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>gb|AF020577.1|AF020577 Stangeria eriopus cytochrome c oxidase (coxI) gene, mitochondrial
           gene encoding mitochondrial protein, partial cds
          Length = 1415

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 72  aggagctgctgattcagcaat 92
           |||||||||||||||||||||
Sbjct: 326 aggagctgctgattcagcaat 346
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>gb|AF020563.1|AF020563 Encephalartos lebomboensis cytochrome c oxidase (coxI) gene,
           mitochondrial gene encoding mitochondrial protein,
           partial cds
          Length = 1415

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 72  aggagctgctgattcagcaat 92
           |||||||||||||||||||||
Sbjct: 326 aggagctgctgattcagcaat 346
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>gb|AF020562.1|AF020562 Cycas revoluta cytochrome c oxidase (coxI) gene, mitochondrial gene
           encoding mitochondrial protein, partial cds
          Length = 1415

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 72  aggagctgctgattcagcaat 92
           |||||||||||||||||||||
Sbjct: 326 aggagctgctgattcagcaat 346
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>ref|NM_128404.1| Arabidopsis thaliana unknown protein AT2G28440 mRNA, complete cds
          Length = 807

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 333 aggagattcctcctgagcac 352
           ||||||||||||||||||||
Sbjct: 84  aggagattcctcctgagcac 65
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>gb|AC156936.5| Mus musculus BAC clone RP24-90K8 from chromosome 14, complete sequence
          Length = 203649

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 317   ttggggtatgtctgtgagga 336
             ||||||||||||||||||||
Sbjct: 90448 ttggggtatgtctgtgagga 90429
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>gb|AC140208.2| Mus musculus BAC clone RP24-469B21 from chromosome 14, complete
             sequence
          Length = 200350

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 317   ttggggtatgtctgtgagga 336
             ||||||||||||||||||||
Sbjct: 19088 ttggggtatgtctgtgagga 19107
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>gb|AF090216.1| Uncultured archaeon 'Norris Geyer Basin #16' recombination/repair
           protein RadA (radA) gene, partial cds
          Length = 399

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 229 ggaatggcaagacctcattgccaa 252
           ||||| ||||||||||||||||||
Sbjct: 216 ggaattgcaagacctcattgccaa 239
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>gb|AF090212.1| Uncultured archaeon 'Norris Geyer Basin #8' recombination/repair
           protein RadA (radA) gene, partial cds
          Length = 399

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 229 ggaatggcaagacctcattgccaa 252
           ||||| ||||||||||||||||||
Sbjct: 216 ggaattgcaagacctcattgccaa 239
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>gb|AF090210.1| Uncultured archaeon 'Norris Geyer Basin #4' recombination/repair
           protein RadA (radA) gene, partial cds
          Length = 387

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 229 ggaatggcaagacctcattgccaa 252
           ||||| ||||||||||||||||||
Sbjct: 216 ggaattgcaagacctcattgccaa 239
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>emb|AL138785.8| Human DNA sequence from clone RP4-604A21 on chromosome 1 Contains part
             of the EPB41 gene for erythrocyte membrane protein band
             4.1 (elliptocytosis 1, RH-linked) and a ribosomal protein
             L27 (RPL27) pseudogene, complete sequence
          Length = 109609

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 317   ttggggtatgtctgtgagga 336
             ||||||||||||||||||||
Sbjct: 22009 ttggggtatgtctgtgagga 22028
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>emb|AL606656.3|OSJN00099 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020J19,
              complete sequence
          Length = 123272

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     aaagattctgcaaggaagga 75
              ||||||||||||||||||||
Sbjct: 103916 aaagattctgcaaggaagga 103897
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>gb|DQ056548.1| Arabidopsis thaliana proline-rich family protein (At2g28440) mRNA,
           complete cds
          Length = 807

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 333 aggagattcctcctgagcac 352
           ||||||||||||||||||||
Sbjct: 84  aggagattcctcctgagcac 65
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>gb|AC006283.6| Arabidopsis thaliana chromosome 2 clone T1B3 map mi54, complete
            sequence
          Length = 93122

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 333  aggagattcctcctgagcac 352
            ||||||||||||||||||||
Sbjct: 9198 aggagattcctcctgagcac 9217
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>ref|XM_686271.1| PREDICTED: Danio rerio similar to Putative adenylate kinase 7
           (LOC562903), mRNA
          Length = 1491

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 334 ggagattcctcctgagcacttgga 357
           |||||||| |||||||||||||||
Sbjct: 721 ggagattcatcctgagcacttgga 744
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>gb|AC022446.6| Homo sapiens chromosome 5 clone RP11-5H13, complete sequence
          Length = 188534

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    tccttaagaattcactggac 52
             ||||||||||||||||||||
Sbjct: 64567 tccttaagaattcactggac 64586
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 56       aaagattctgcaaggaagga 75
                ||||||||||||||||||||
Sbjct: 35479113 aaagattctgcaaggaagga 35479094
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>gb|AC154252.1| Mus musculus BAC clone RP24-197M20 from chromosome 13, complete sequence
          Length = 176702

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 320    gggtatgtctgtgaggagat 339
              ||||||||||||||||||||
Sbjct: 156701 gggtatgtctgtgaggagat 156720
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>gb|AC150476.3| Dasypus novemcinctus clone VMRC5-421E14, complete sequence
          Length = 68689

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     cagagtctagaagacttgct 25
             ||||||||||||||||||||
Sbjct: 26460 cagagtctagaagacttgct 26479
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>dbj|AK105982.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-G02,
          full insert sequence
          Length = 1113

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 56 aaagattctgcaaggaagga 75
          ||||||||||||||||||||
Sbjct: 64 aaagattctgcaaggaagga 45
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>emb|AL139353.3|CNS01DXJ Human chromosome 14 DNA sequence BAC R-176H8 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 170919

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   tcgcagattaaggagtcatt 138
             ||||||||||||||||||||
Sbjct: 51487 tcgcagattaaggagtcatt 51506
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>emb|AL591582.32| Mouse DNA sequence from clone RP23-403P3 on chromosome 12, complete
             sequence
          Length = 168814

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 226   tcgggaatggcaagacctca 245
             ||||||||||||||||||||
Sbjct: 49330 tcgggaatggcaagacctca 49349
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>emb|AL672148.8| Mouse DNA sequence from clone RP23-369O15 on chromosome X, complete
              sequence
          Length = 130107

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 30     ttatccttaagaattcactggacgcaaa 57
              |||||| ||||||||||||||| |||||
Sbjct: 128123 ttatccataagaattcactggaagcaaa 128096
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>emb|AL831792.6| Mouse DNA sequence from clone RP23-379L17 on chromosome 4, complete
             sequence
          Length = 169747

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 345   ctgagcacttggagcaggat 364
             ||||||||||||||||||||
Sbjct: 85070 ctgagcacttggagcaggat 85089
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>emb|AL732480.12| Mouse DNA sequence from clone RP23-11N21 on chromosome 4, complete
             sequence
          Length = 209063

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 316   attggggtatgtctgtgagg 335
             ||||||||||||||||||||
Sbjct: 61298 attggggtatgtctgtgagg 61317


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,692,787
Number of Sequences: 3902068
Number of extensions: 3692787
Number of successful extensions: 67804
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67700
Number of HSP's gapped (non-prelim): 99
length of query: 475
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 453
effective length of database: 17,147,199,772
effective search space: 7767681496716
effective search space used: 7767681496716
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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