ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl30h03 |
|---|---|
| Clone Library Name | barley_pub |
>COPG2_MOUSE (Q9QXK3) Coatomer subunit gamma-2 (Gamma-2 coat protein) (Gamma-2| COP) Length = 871 Score = 143 bits (361), Expect = 2e-34 Identities = 71/125 (56%), Positives = 92/125 (73%) Frame = +1 Query: 103 KDDDDSDIEYSPFFGIEKGAVLQEARAFHDPQLDARRCSQVITKLLYLINQGESFTKVEA 282 K D++S +PF +EK AVLQEAR F++ ++ RRC ++TK+LYL+NQGE F +EA Sbjct: 7 KKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTMEA 66 Query: 283 TEVFFAVTKLFQSNDAGLRRLVYLMIKELSPSSDEVFIVTSSLMKDMNSKTDMYRANGIR 462 TE FFA+T+LFQSND LRR+ YL IKE++ S++V IVTSSL KDM K D+YR IR Sbjct: 67 TEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIR 126 Query: 463 VLCRI 477 LCRI Sbjct: 127 ALCRI 131
>COPG2_HUMAN (Q9UBF2) Coatomer subunit gamma-2 (Gamma-2 coat protein) (Gamma-2| COP) Length = 871 Score = 143 bits (360), Expect = 3e-34 Identities = 71/125 (56%), Positives = 91/125 (72%) Frame = +1 Query: 103 KDDDDSDIEYSPFFGIEKGAVLQEARAFHDPQLDARRCSQVITKLLYLINQGESFTKVEA 282 K D++S +PF +EK AVLQEAR F++ ++ RRC ++TK+LYL+NQGE F EA Sbjct: 7 KKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTEA 66 Query: 283 TEVFFAVTKLFQSNDAGLRRLVYLMIKELSPSSDEVFIVTSSLMKDMNSKTDMYRANGIR 462 TE FFA+T+LFQSND LRR+ YL IKE++ S++V IVTSSL KDM K D+YR IR Sbjct: 67 TEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIR 126 Query: 463 VLCRI 477 LCRI Sbjct: 127 ALCRI 131
>COPG_BOVIN (P53620) Coatomer subunit gamma (Gamma-coat protein) (Gamma-COP)| Length = 874 Score = 139 bits (349), Expect = 5e-33 Identities = 69/125 (55%), Positives = 90/125 (72%) Frame = +1 Query: 103 KDDDDSDIEYSPFFGIEKGAVLQEARAFHDPQLDARRCSQVITKLLYLINQGESFTKVEA 282 K D++S +PF +EK AVLQEAR F++ ++ R+C+ ++TK+LYLINQGE EA Sbjct: 7 KKDEESGGGSNPFQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEHLGTTEA 66 Query: 283 TEVFFAVTKLFQSNDAGLRRLVYLMIKELSPSSDEVFIVTSSLMKDMNSKTDMYRANGIR 462 TE FFA+TKLFQSND LRR+ YL IKE+S +++V IVTSSL KDM K D YR +R Sbjct: 67 TEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDSYRGPAVR 126 Query: 463 VLCRI 477 LC+I Sbjct: 127 ALCQI 131
>COPG_HUMAN (Q9Y678) Coatomer subunit gamma (Gamma-coat protein) (Gamma-COP)| Length = 874 Score = 138 bits (348), Expect = 7e-33 Identities = 69/125 (55%), Positives = 90/125 (72%) Frame = +1 Query: 103 KDDDDSDIEYSPFFGIEKGAVLQEARAFHDPQLDARRCSQVITKLLYLINQGESFTKVEA 282 K D++S +PF +EK AVLQEAR F++ ++ R+C+ ++TK+LYLINQGE EA Sbjct: 7 KKDEESGGGSNPFQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEHLGTTEA 66 Query: 283 TEVFFAVTKLFQSNDAGLRRLVYLMIKELSPSSDEVFIVTSSLMKDMNSKTDMYRANGIR 462 TE FFA+TKLFQSND LRR+ YL IKE+S +++V IVTSSL KDM K D YR +R Sbjct: 67 TEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNYRGPAVR 126 Query: 463 VLCRI 477 LC+I Sbjct: 127 ALCQI 131
>COPG_CAEEL (Q22498) Probable coatomer subunit gamma (Gamma-coat protein)| (Gamma-COP) Length = 870 Score = 135 bits (340), Expect = 6e-32 Identities = 66/127 (51%), Positives = 92/127 (72%) Frame = +1 Query: 97 MKKDDDDSDIEYSPFFGIEKGAVLQEARAFHDPQLDARRCSQVITKLLYLINQGESFTKV 276 MK + D + + + ++K +VLQEARAF++ ++AR+C +++KL+Y+I QGES + Sbjct: 1 MKTNKKDEETGGNVYAHLDKTSVLQEARAFNETPINARKCCFILSKLIYIIQQGESIGRT 60 Query: 277 EATEVFFAVTKLFQSNDAGLRRLVYLMIKELSPSSDEVFIVTSSLMKDMNSKTDMYRANG 456 EATE FF VTKL+QS D LRR+VYL +KEL+ SD+V IVTSSL KDM + D+YRA Sbjct: 61 EATEAFFGVTKLWQSKDVSLRRMVYLAVKELAEVSDDVIIVTSSLTKDMTGREDLYRAAA 120 Query: 457 IRVLCRI 477 IR LC+I Sbjct: 121 IRALCKI 127
>COPG_SCHPO (P87140) Probable coatomer subunit gamma (Gamma-coat protein)| (Gamma-COP) Length = 905 Score = 109 bits (272), Expect = 5e-24 Identities = 57/132 (43%), Positives = 86/132 (65%), Gaps = 1/132 (0%) Frame = +1 Query: 94 YMKKDDDDSDIEYSPFFGIEKGAVLQEARAFHDPQLDARRCSQVITKLLYLINQGESFTK 273 Y KKDDD + S F + + V Q+ARAF+ + R+ ++++K+ YLI GE F + Sbjct: 3 YSKKDDDGDE---SIFANVNQVTVTQDARAFNSSSISPRKSRRLLSKIAYLIYTGEHFQE 59 Query: 274 VEATEVFFAVTKLFQSNDAGLRRLVYLMIKELSPSSDEVFIVTSSLMKD-MNSKTDMYRA 450 +ATE+FF +TKLFQ D LR+ VY++IKELS +++V ++TSS+MKD + +YR Sbjct: 60 KQATELFFGITKLFQHKDPSLRQFVYIIIKELSVVAEDVIMITSSIMKDTATGRETIYRP 119 Query: 451 NGIRVLCRILMA 486 N IR L R++ A Sbjct: 120 NAIRSLIRVIDA 131
>COPG_YEAST (P32074) Coatomer subunit gamma (Gamma-coat protein) (Gamma-COP)| Length = 935 Score = 89.0 bits (219), Expect = 6e-18 Identities = 45/111 (40%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Frame = +1 Query: 151 EKGAVLQEA-RAFHDPQLDARRCSQVITKLLYLINQGESFTKVEATEVFFAVTKLFQSND 327 +K + Q+ F++ ++++RC +I++LL L+ QGE+F + EAT +FF+++KLFQ + Sbjct: 19 DKMTIYQDCMNTFNESPVNSKRCRLLISRLLRLLAQGETFPQNEATALFFSISKLFQHQN 78 Query: 328 AGLRRLVYLMIKELSPSSDEVFIVTSSLMKDMNSKTDMYRANGIRVLCRIL 480 LR+ VYL IKELS S++V + TSS+MKD+ + +D+ + + IR L +L Sbjct: 79 DPLRQAVYLAIKELSGISEDVLMATSSIMKDVQNGSDLIKPDAIRSLTYVL 129
>AP4B1_MOUSE (Q9WV76) AP-4 complex subunit beta-1 (Adapter-related protein| complex 4 beta-1 subunit) (Beta subunit of AP-4) (AP-4 adapter complex beta subunit) Length = 739 Score = 38.5 bits (88), Expect = 0.010 Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 3/119 (2%) Frame = +1 Query: 136 PFFGIEKGAVLQEARAFHDP--QLDARRCSQVITKLLYLINQGESFTKVEATEVFFAVTK 309 P+ G E V + +A +P Q D R VI +++ + QG ++ ++VF + K Sbjct: 2 PYLGSED-VVKELKKALCNPHIQADRLRYRNVIQRVIRHMTQG-----LDMSDVFMEMVK 55 Query: 310 LFQSNDAGLRRLVYLMIKELSP-SSDEVFIVTSSLMKDMNSKTDMYRANGIRVLCRILM 483 + D ++LVYL + +P D + ++L KD + M R +R +C + M Sbjct: 56 ASATVDIVQKKLVYLYMGTYAPLKPDLALLAINTLCKDCSDPNPMVRGLALRSMCSLRM 114
>MATK_ZANAE (Q9GHE5) Maturase K (Intron maturase)| Length = 512 Score = 35.8 bits (81), Expect = 0.065 Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 2/40 (5%) Frame = -1 Query: 320 DWNNLVTAKKTSVASTFVKDSPWLIK--YNNLVITCEHLL 207 +WNN++T KK+S F K++P L + YN+ V+ CE +L Sbjct: 191 NWNNIITPKKSSYG--FSKENPRLFRFLYNSYVVECESIL 228
>MATK_ANCDI (Q8MEC9) Maturase K (Intron maturase)| Length = 511 Score = 35.4 bits (80), Expect = 0.085 Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 3/41 (7%) Frame = -1 Query: 320 DWNNLVTAKKTSVASTFVKDSP---WLIKYNNLVITCEHLL 207 +WNNL+T KK+S F K++P W + YN+ V+ CE +L Sbjct: 191 NWNNLITQKKSSYG--FSKENPRLFWFL-YNSYVVECESIL 228
>MATK_ARITO (Q8MEC8) Maturase K (Intron maturase)| Length = 512 Score = 35.0 bits (79), Expect = 0.11 Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 2/40 (5%) Frame = -1 Query: 320 DWNNLVTAKKTSVASTFVKDSP--WLIKYNNLVITCEHLL 207 +WNNL+T KK++ F K++P +L YN+ V+ CE +L Sbjct: 191 NWNNLITPKKSNYYG-FSKENPRLFLFLYNSYVVECESIL 229
>MATK_AMOTI (Q8MED5) Maturase K (Intron maturase)| Length = 512 Score = 35.0 bits (79), Expect = 0.11 Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 2/40 (5%) Frame = -1 Query: 320 DWNNLVTAKKTSVASTFVKDSP--WLIKYNNLVITCEHLL 207 +WNNL+T KK++ F K++P +L YN+ V+ CE +L Sbjct: 191 NWNNLITPKKSNYYG-FSKENPRLFLFLYNSYVVECESIL 229
>MATK_AMOBY (Q8MEH7) Maturase K (Intron maturase)| Length = 512 Score = 35.0 bits (79), Expect = 0.11 Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 2/40 (5%) Frame = -1 Query: 320 DWNNLVTAKKTSVASTFVKDSP--WLIKYNNLVITCEHLL 207 +WNNL+T KK++ F K++P +L YN+ V+ CE +L Sbjct: 191 NWNNLITPKKSNYYG-FSKENPRLFLFLYNSYVVECESIL 229
>MATK_AMOPO (Q8MEE6) Maturase K (Intron maturase)| Length = 512 Score = 33.5 bits (75), Expect = 0.32 Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 2/39 (5%) Frame = -1 Query: 320 DWNNLVTAKKTSVASTFVKDSP--WLIKYNNLVITCEHL 210 +WNNL+T KK++ F K++P +L YN+ V+ CE + Sbjct: 191 NWNNLITPKKSNYYG-FSKENPRLFLFLYNSYVVECESI 228
>AP3B1_HUMAN (O00203) AP-3 complex subunit beta-1 (Adapter-related protein| complex 3 beta-1 subunit) (Beta3A-adaptin) (Adaptor protein complex AP-3 beta-1 subunit) (Clathrin assembly protein complex 3 beta-1 large chain) Length = 1094 Score = 32.3 bits (72), Expect = 0.72 Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = +1 Query: 280 ATEVFFAVTKLFQSNDAGLRRLVYL-MIKELSPSSDEVFIVTSSLMKDMNSKTDMYRANG 456 A+E+F AV K S + +++LVY+ +++ D + S+ + + + RA+ Sbjct: 76 ASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRASA 135 Query: 457 IRVLCRI 477 +RVL I Sbjct: 136 LRVLSSI 142
>AP3B1_CANFA (Q7YRF1) AP-3 complex subunit beta-1 (Adapter-related protein| complex 3 beta-1 subunit) (Beta3A-adaptin) (Adaptor protein complex AP-3 beta-1 subunit) (Clathrin assembly protein complex 3 beta-1 large chain) Length = 1091 Score = 32.3 bits (72), Expect = 0.72 Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = +1 Query: 280 ATEVFFAVTKLFQSNDAGLRRLVYL-MIKELSPSSDEVFIVTSSLMKDMNSKTDMYRANG 456 A+E+F AV K S + +++LVY+ +++ D + S+ + + + RA+ Sbjct: 76 ASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRASA 135 Query: 457 IRVLCRI 477 +RVL I Sbjct: 136 LRVLSSI 142
>AP3B1_MOUSE (Q9Z1T1) AP-3 complex subunit beta-1 (Adapter-related protein| complex 3 beta-1 subunit) (Beta3A-adaptin) (Adaptor protein complex AP-3 beta-1 subunit) (Clathrin assembly protein complex 3 beta-1 large chain) Length = 1105 Score = 32.3 bits (72), Expect = 0.72 Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = +1 Query: 280 ATEVFFAVTKLFQSNDAGLRRLVYL-MIKELSPSSDEVFIVTSSLMKDMNSKTDMYRANG 456 A+E+F AV K S + +++LVY+ +++ D + S+ + + + RA+ Sbjct: 76 ASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRASA 135 Query: 457 IRVLCRI 477 +RVL I Sbjct: 136 LRVLSSI 142
>MATK_FILMA (Q8MEC7) Maturase K (Intron maturase)| Length = 512 Score = 31.6 bits (70), Expect = 1.2 Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 2/39 (5%) Frame = -1 Query: 320 DWNNLVTAKKTSVASTFVKDSP--WLIKYNNLVITCEHL 210 +W+NL+T KK++ F K++P +L YN+ V+ CE + Sbjct: 191 NWSNLITPKKSNYYG-FSKENPRLFLFLYNSYVVECESI 228
>QUEA_THIDN (Q30PZ7) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC| 5.-.-.-) (Queuosine biosynthesis protein queA) Length = 342 Score = 31.2 bits (69), Expect = 1.6 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%) Frame = +1 Query: 91 PYMKKDDD-DSDIEYSPFFGIEKGAVLQEARAFHDPQLDARRCSQVITKLLYLINQGE-S 264 PY++++D+ D +IEY F E+GAV + H + R T ++ G + Sbjct: 159 PYIQREDNKDDEIEYQSVFAKEEGAVAAPTASLHFTKEQHERVCTKFTHAYITLHVGSGT 218 Query: 265 FTKVEATEV 291 F VE ++ Sbjct: 219 FKPVECEKI 227
>VDH_STRCO (Q06539) Valine dehydrogenase (EC 1.4.1.-) (ValDH)| Length = 363 Score = 30.8 bits (68), Expect = 2.1 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +1 Query: 79 EMAQPYMKKDDDDSDIEYSPFFGIEKGAVLQEARAFHDPQLDARRCSQVITKL 237 ++A P ++KD D I Y+P + + G V+Q A H D RC +K+ Sbjct: 276 QLAHPGVEKDLADRGILYAPDYVVNAGGVIQVADELHG--FDFDRCKAKASKI 326
>MATK_LENCU (Q8MCR6) Maturase K (Intron maturase)| Length = 507 Score = 30.4 bits (67), Expect = 2.7 Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 2/45 (4%) Frame = -1 Query: 341 LLRPASLDWNNLVTAKKTSVASTFVKDSP--WLIKYNNLVITCEH 213 LLR +WN+ +T KK STF K +P +L YN V CE+ Sbjct: 176 LLRLFLCNWNSFITTKKKKSISTFSKINPRFFLFLYNFYV--CEY 218
>VDH_STRAL (O69056) Valine dehydrogenase (EC 1.4.1.-) (ValDH)| Length = 363 Score = 30.4 bits (67), Expect = 2.7 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +1 Query: 79 EMAQPYMKKDDDDSDIEYSPFFGIEKGAVLQEARAFHDPQLDARRCSQVITKL 237 ++A P ++KD D I Y+P + + G V+Q A H D RC K+ Sbjct: 276 QLAHPGVEKDLADRGILYAPDYVVNAGGVIQVADELHG--FDFDRCKAKAAKI 326
>MATK_CRAPL (Q5GAA8) Maturase K (Intron maturase)| Length = 507 Score = 30.0 bits (66), Expect = 3.6 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 11/61 (18%) Frame = -1 Query: 317 WNNLVTAKKTSVASTFVKDSPWLIKYNNLVITCE-----------HLLASSWGSWKARAS 171 WN+L+T KK S + + +L YN+ V E HLL++S+G + R Sbjct: 184 WNSLITPKKASSSFSKKNQRLFLFLYNSHVCEYEYFFVFIRKQSSHLLSTSYGVFLERIY 243 Query: 170 C 168 C Sbjct: 244 C 244
>MATK_SPIIN (Q8WHM7) Maturase K (Intron maturase)| Length = 510 Score = 29.6 bits (65), Expect = 4.7 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Frame = -1 Query: 314 NNLVTAKKTSVASTFVKDSPWLIK--YNNLVITCEHL 210 NN +T KK+S F KD+P L + YN+ V+ CE + Sbjct: 193 NNCITPKKSSYG--FSKDNPRLYRFLYNSYVVECESI 227
>ZN384_HUMAN (Q8TF68) Zinc finger protein 384 (Nuclear matrix transcription| factor 4) (Nuclear matrix protein 4) (CAG repeat protein 1) (CAS-interacting zinc finger protein) Length = 576 Score = 29.6 bits (65), Expect = 4.7 Identities = 15/35 (42%), Positives = 18/35 (51%) Frame = +1 Query: 19 PAPPLERRMPRSLAGDLTDPEMAQPYMKKDDDDSD 123 P PP R+ R L L PEM PY+ +DD D Sbjct: 188 PKPPRGRKKKRMLESGL--PEMNDPYVLSPEDDDD 220
>Y640_METJA (Q58057) Hypothetical protein MJ0640| Length = 324 Score = 29.6 bits (65), Expect = 4.7 Identities = 14/90 (15%), Positives = 40/90 (44%) Frame = -1 Query: 473 LQRTLMPLARYISVLLFISFINELVTMKTSSDDGESSLIIKYTSLLRPASLDWNNLVTAK 294 L++ + + + +L I+ + + T + +D E +I+ + +D +N + Sbjct: 3 LKKVVNEIRNFEGILRKIAIKDVVETFDFNDEDYEFDIIVDFGDDAAVIGIDGDNAILLA 62 Query: 293 KTSVASTFVKDSPWLIKYNNLVITCEHLLA 204 + ++ PW Y ++++ C+ + A Sbjct: 63 ADGIWGKLLEADPWWAGYCSVLVNCKDIAA 92
>COAT_PAVHH (P03136) Coat protein VP1 [Contains: Coat protein VP2]| Length = 722 Score = 29.6 bits (65), Expect = 4.7 Identities = 18/55 (32%), Positives = 30/55 (54%) Frame = -1 Query: 413 INELVTMKTSSDDGESSLIIKYTSLLRPASLDWNNLVTAKKTSVASTFVKDSPWL 249 ++ +VT T G I+K+ + LRP +L WN + A SVA++++ WL Sbjct: 651 VSRIVTYSTFYWKG----ILKFKAKLRP-NLTWNPVYQATTDSVANSYMNVKKWL 700
>MATK_NUPVA (O98635) Maturase K (Intron maturase)| Length = 505 Score = 29.3 bits (64), Expect = 6.1 Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 2/40 (5%) Frame = -1 Query: 320 DWNNLVTAKKTSVASTFVKDSP--WLIKYNNLVITCEHLL 207 +WN+L+T KK++ S F K++ +L YN+ V CE +L Sbjct: 189 NWNSLITPKKST--SIFSKENQRLFLFLYNSHVYECESVL 226
>YQI9_CAEEL (Q09507) Hypothetical protein C45G9.9| Length = 294 Score = 29.3 bits (64), Expect = 6.1 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 6/47 (12%) Frame = +1 Query: 1 TKPTRHPAPPLE-RRMPRSLAGDLTDPEM-----AQPYMKKDDDDSD 123 T P P P E + +P+ GD + P + A+ Y K+D DD D Sbjct: 165 TAPATLPPPSAESKHLPQDPPGDASSPRVQRQYTAEKYSKEDQDDDD 211
>YQI4_CAEEL (Q09505) Hypothetical protein C45G9.4| Length = 292 Score = 29.3 bits (64), Expect = 6.1 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 6/47 (12%) Frame = +1 Query: 1 TKPTRHPAPPLE-RRMPRSLAGDLTDPEM-----AQPYMKKDDDDSD 123 T P P P E + +P+ GD + P + A+ Y K+D DD D Sbjct: 163 TAPATLPPPSAESKHLPQDPPGDASSPRVQRQYTAEKYSKEDQDDDD 209
>HABP2_BOVIN (Q5E9Z2) Hyaluronan-binding protein 2 precursor (EC 3.4.21.-)| [Contains: Hyaluronan-binding protein 2 50 kDa heavy chain; Hyaluronan-binding protein 2 50 kDa heavy chain alternate form; Hyaluronan-binding protein 2 27 kDa light chain; Hyaluro Length = 558 Score = 29.3 bits (64), Expect = 6.1 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = +1 Query: 199 LDARRCSQVITKLLYLINQGESFTKVEATEVFFAVTKLFQ 318 L A C+++ TK L ++ + TK E E F V K+F+ Sbjct: 356 LTAAHCTEIKTKYLKVVLGDQDLTKTEFHEQSFGVQKIFK 395
>MALR_STRR6 (P0A4T2) HTH-type transcriptional regulator malR (Maltose operon| transcriptional repressor) Length = 327 Score = 28.9 bits (63), Expect = 7.9 Identities = 17/47 (36%), Positives = 24/47 (51%) Frame = +1 Query: 67 LTDPEMAQPYMKKDDDDSDIEYSPFFGIEKGAVLQEARAFHDPQLDA 207 LT E A + K D++ I ++ F EKG + HDPQ+DA Sbjct: 199 LTGYEQALKHYKLTTDNNRIYFADEFLEEKGYKFSKRLFKHDPQIDA 245
>MALR_STRPN (P0A4T1) HTH-type transcriptional regulator malR (Maltose operon| transcriptional repressor) Length = 327 Score = 28.9 bits (63), Expect = 7.9 Identities = 17/47 (36%), Positives = 24/47 (51%) Frame = +1 Query: 67 LTDPEMAQPYMKKDDDDSDIEYSPFFGIEKGAVLQEARAFHDPQLDA 207 LT E A + K D++ I ++ F EKG + HDPQ+DA Sbjct: 199 LTGYEQALKHYKLTTDNNRIYFADEFLEEKGYKFSKRLFKHDPQIDA 245
>MATK_NYMOD (O98637) Maturase K (Intron maturase)| Length = 509 Score = 28.9 bits (63), Expect = 7.9 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%) Frame = -1 Query: 320 DWNNLVTAKKTSVASTFVKDSP--WLIKYNNLVITCEHLL 207 +WN+L+T+ S F K++ +L YN+ V CE +L Sbjct: 191 NWNSLITSTSNKSISIFSKENQRLFLFLYNSHVYECESVL 230
>MTLD_MYCPN (P78008) Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)| Length = 364 Score = 28.9 bits (63), Expect = 7.9 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%) Frame = +1 Query: 259 ESFTKVEATEVFFAVTKLFQSNDAGLRRL--VYLMIKELSPSSD 384 E K+ E F+A+ KLF+ N L + VYLM+ + + + D Sbjct: 278 EPLRKLNQNERFYAIYKLFKKNKIALNNILQVYLMVLKTNITDD 321
>MATK_ACOCL (Q9GHG9) Maturase K (Intron maturase)| Length = 511 Score = 28.9 bits (63), Expect = 7.9 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 2/40 (5%) Frame = -1 Query: 320 DWNNLVTAKKTSVASTFVKDSP--WLIKYNNLVITCEHLL 207 +WN+L+T KK S++ F K + +L YN+ V CE L Sbjct: 190 NWNSLITPKK-SISFLFSKGNQRLFLFLYNSYVFECESAL 228 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,775,098 Number of Sequences: 219361 Number of extensions: 1249426 Number of successful extensions: 4004 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 3867 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3997 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3523384522 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
