Clone Name | bastl30g12 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK065278.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002L16, full insert sequence Length = 3426 Score = 549 bits (277), Expect = e-153 Identities = 405/448 (90%) Strand = Plus / Plus Query: 1 aaggaggccaacctcttcaaagtcatcgtcaaatcatatgaaactaagcagtataagaaa 60 ||||||||||||||||||||||||||||||||||| ||||| || ||||| |||||||| Sbjct: 123 aaggaggccaacctcttcaaagtcatcgtcaaatcctatgagacaaagcaatataagaag 182 Query: 61 gggttgaaggccgcagattccatgttaaagaagttccctgaacatggagaaactttatcg 120 || ||||||| ||||||||||| ||||||||||||||||| ||||| ||||| ||||| Sbjct: 183 ggcctgaaggcagcagattccattttaaagaagttccctgagcatggcgaaaccttatca 242 Query: 121 atgaaaggtttgacactaaattgcatggatcggaaatctgaagcatacgagctcgttcgc 180 |||||||||||||| |||||||||||||||||||||||||||||||| || || |||||| Sbjct: 243 atgaaaggtttgacgctaaattgcatggatcggaaatctgaagcatatgaacttgttcgc 302 Query: 181 cgtggattgaagaatgatctgaagagtcatgtatgctggcatgtctatggtttgctttac 240 |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 303 cgtggattgaagaatgatctgaagagtcatgtgtgctggcatgtctatggcttgctttat 362 Query: 241 agatcagatagagaatacagagaagctataaaatgttacagaaatgctttgaggattgat 300 ||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct: 363 cgatcagacagagaatacagagaagccataaaatgttacagaaatgctctgaggattgat 422 Query: 301 ccagacaatattgaaattttgcgtgacttgtcacttctccaggcgcanatgagggacttg 360 ||||| || || |||||| | |||||| |||||||||||||||| || |||||||||||| Sbjct: 423 ccagataacatagaaattctacgtgacctgtcacttctccaggcacaaatgagggacttg 482 Query: 361 tctggctttgttgagactagacaacagcttctgacattaaagccaaaccaccgtatgaac 420 |||||||||||||||||||| ||||| ||| | ||| | |||||||| ||||| |||||| Sbjct: 483 tctggctttgttgagactaggcaacaacttttaacactgaagccaaatcaccgcatgaac 542 Query: 421 tggattggctttgctgtatctcatcatt 448 |||||||| ||||||||| |||| |||| Sbjct: 543 tggattggttttgctgtagctcaccatt 570
>ref|NM_192804.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2061 Score = 490 bits (247), Expect = e-135 Identities = 375/418 (89%) Strand = Plus / Plus Query: 31 aaatcatatgaaactaagcagtataagaaagggttgaaggccgcagattccatgttaaag 90 ||||| ||||| || ||||| |||||||| || ||||||| ||||||||||| |||||| Sbjct: 28 aaatcctatgagacaaagcaatataagaagggcctgaaggcagcagattccattttaaag 87 Query: 91 aagttccctgaacatggagaaactttatcgatgaaaggtttgacactaaattgcatggat 150 ||||||||||| ||||| ||||| ||||| |||||||||||||| ||||||||||||||| Sbjct: 88 aagttccctgagcatggcgaaaccttatcaatgaaaggtttgacgctaaattgcatggat 147 Query: 151 cggaaatctgaagcatacgagctcgttcgccgtggattgaagaatgatctgaagagtcat 210 ||||||||||||||||| || || |||||||||||||||||||||||||||||||||||| Sbjct: 148 cggaaatctgaagcatatgaacttgttcgccgtggattgaagaatgatctgaagagtcat 207 Query: 211 gtatgctggcatgtctatggtttgctttacagatcagatagagaatacagagaagctata 270 || ||||||||||||||||| |||||||| ||||||| ||||||||||||||||| ||| Sbjct: 208 gtgtgctggcatgtctatggcttgctttatcgatcagacagagaatacagagaagccata 267 Query: 271 aaatgttacagaaatgctttgaggattgatccagacaatattgaaattttgcgtgacttg 330 |||||||||||||||||| |||||||||||||||| || || |||||| | |||||| || Sbjct: 268 aaatgttacagaaatgctctgaggattgatccagataacatagaaattctacgtgacctg 327 Query: 331 tcacttctccaggcgcanatgagggacttgtctggctttgttgagactagacaacagctt 390 |||||||||||||| || |||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 328 tcacttctccaggcacaaatgagggacttgtctggctttgttgagactaggcaacaactt 387 Query: 391 ctgacattaaagccaaaccaccgtatgaactggattggctttgctgtatctcatcatt 448 | ||| | |||||||| ||||| |||||||||||||| ||||||||| |||| |||| Sbjct: 388 ttaacactgaagccaaatcaccgcatgaactggattggttttgctgtagctcaccatt 445
>ref|NM_106690.3| Arabidopsis thaliana EMB2753 AT1G80410 (EMB2753) mRNA, complete cds Length = 3320 Score = 224 bits (113), Expect = 2e-55 Identities = 364/448 (81%) Strand = Plus / Plus Query: 1 aaggaggccaacctcttcaaagtcatcgtcaaatcatatgaaactaagcagtataagaaa 60 |||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||| Sbjct: 170 aaggaggccaacctcttcaagctcatcgtcaaatcatatgagactaagcagtacaagaag 229 Query: 61 gggttgaaggccgcagattccatgttaaagaagttccctgaacatggagaaactttatcg 120 || | ||||| || ||| |||| ||||| ||||| ||||| |||||||| ||||||||| Sbjct: 230 ggactcaaggcagctgatgccatattaaaaaagtttcctgatcatggagagactttatcg 289 Query: 121 atgaaaggtttgacactaaattgcatggatcggaaatctgaagcatacgagctcgttcgc 180 |||||||| |||| ||||| || ||||| || ||| |||||||||| ||||| ||||| Sbjct: 290 atgaaaggactgactctaaactgtatggaccgcaaaactgaagcatatgagcttgttcga 349 Query: 181 cgtggattgaagaatgatctgaagagtcatgtatgctggcatgtctatggtttgctttac 240 | |||| ||||||||||| | || || ||||| ||||||||||| |||| | | ||| Sbjct: 350 cttggagtgaagaatgatatcaaaagccatgtttgctggcatgtgcttggtcttttgtac 409 Query: 241 agatcagatagagaatacagagaagctataaaatgttacagaaatgctttgaggattgat 300 | ||||| ||||| || |||||||| || ||||| ||| |||||||| | || || ||| Sbjct: 410 cggtcagacagagagtatagagaagcaatcaaatgctaccgaaatgctcttagaatagat 469 Query: 301 ccagacaatattgaaattttgcgtgacttgtcacttctccaggcgcanatgagggacttg 360 || || || ||||||| | | ||| | |||||||| ||||| || ||| ||||||| Sbjct: 470 cctgataaccttgaaatactcagagacctctcacttctgcaggcacaaatgcgggactta 529 Query: 361 tctggctttgttgagactagacaacagcttctgacattaaagccaaaccaccgtatgaac 420 || || ||||| ||||| || || |||||| ||||||| ||||| || ||||| |||||| Sbjct: 530 tccggttttgtggagaccaggcagcagcttttgacattgaagcctaatcaccgaatgaac 589 Query: 421 tggattggctttgctgtatctcatcatt 448 |||||||||||||| || ||||| |||| Sbjct: 590 tggattggctttgcagtctctcagcatt 617
>gb|AY091419.1| Arabidopsis thaliana putative N-terminal acetyltransferase (At1g80410) mRNA, complete cds Length = 2725 Score = 224 bits (113), Expect = 2e-55 Identities = 364/448 (81%) Strand = Plus / Plus Query: 1 aaggaggccaacctcttcaaagtcatcgtcaaatcatatgaaactaagcagtataagaaa 60 |||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||| Sbjct: 22 aaggaggccaacctcttcaagctcatcgtcaaatcatatgagactaagcagtacaagaag 81 Query: 61 gggttgaaggccgcagattccatgttaaagaagttccctgaacatggagaaactttatcg 120 || | ||||| || ||| |||| ||||| ||||| ||||| |||||||| ||||||||| Sbjct: 82 ggactcaaggcagctgatgccatattaaaaaagtttcctgatcatggagagactttatcg 141 Query: 121 atgaaaggtttgacactaaattgcatggatcggaaatctgaagcatacgagctcgttcgc 180 |||||||| |||| ||||| || ||||| || ||| |||||||||| ||||| ||||| Sbjct: 142 atgaaaggactgactctaaactgtatggaccgcaaaactgaagcatatgagcttgttcga 201 Query: 181 cgtggattgaagaatgatctgaagagtcatgtatgctggcatgtctatggtttgctttac 240 | |||| ||||||||||| | || || ||||| ||||||||||| |||| | | ||| Sbjct: 202 cttggagtgaagaatgatatcaaaagccatgtttgctggcatgtgcttggtcttttgtac 261 Query: 241 agatcagatagagaatacagagaagctataaaatgttacagaaatgctttgaggattgat 300 | ||||| ||||| || |||||||| || ||||| ||| |||||||| | || || ||| Sbjct: 262 cggtcagacagagagtatagagaagcaatcaaatgctaccgaaatgctcttagaatagat 321 Query: 301 ccagacaatattgaaattttgcgtgacttgtcacttctccaggcgcanatgagggacttg 360 || || || ||||||| | | ||| | |||||||| ||||| || ||| ||||||| Sbjct: 322 cctgataaccttgaaatactcagagacctctcacttctgcaggcacaaatgcgggactta 381 Query: 361 tctggctttgttgagactagacaacagcttctgacattaaagccaaaccaccgtatgaac 420 || || ||||| ||||| || || |||||| ||||||| ||||| || ||||| |||||| Sbjct: 382 tccggttttgtggagaccaggcagcagcttttgacattgaagcctaatcaccgaatgaac 441 Query: 421 tggattggctttgctgtatctcatcatt 448 |||||||||||||| || ||||| |||| Sbjct: 442 tggattggctttgcagtctctcagcatt 469
>gb|AY064015.1| Arabidopsis thaliana putative N-terminal acetyltransferase (At1g80410) mRNA, complete cds Length = 3295 Score = 224 bits (113), Expect = 2e-55 Identities = 364/448 (81%) Strand = Plus / Plus Query: 1 aaggaggccaacctcttcaaagtcatcgtcaaatcatatgaaactaagcagtataagaaa 60 |||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||| Sbjct: 166 aaggaggccaacctcttcaagctcatcgtcaaatcatatgagactaagcagtacaagaag 225 Query: 61 gggttgaaggccgcagattccatgttaaagaagttccctgaacatggagaaactttatcg 120 || | ||||| || ||| |||| ||||| ||||| ||||| |||||||| ||||||||| Sbjct: 226 ggactcaaggcagctgatgccatattaaaaaagtttcctgatcatggagagactttatcg 285 Query: 121 atgaaaggtttgacactaaattgcatggatcggaaatctgaagcatacgagctcgttcgc 180 |||||||| |||| ||||| || ||||| || ||| |||||||||| ||||| ||||| Sbjct: 286 atgaaaggactgactctaaactgtatggaccgcaaaactgaagcatatgagcttgttcga 345 Query: 181 cgtggattgaagaatgatctgaagagtcatgtatgctggcatgtctatggtttgctttac 240 | |||| ||||||||||| | || || ||||| ||||||||||| |||| | | ||| Sbjct: 346 cttggagtgaagaatgatatcaaaagccatgtttgctggcatgtgcttggtcttttgtac 405 Query: 241 agatcagatagagaatacagagaagctataaaatgttacagaaatgctttgaggattgat 300 | ||||| ||||| || |||||||| || ||||| ||| |||||||| | || || ||| Sbjct: 406 cggtcagacagagagtatagagaagcaatcaaatgctaccgaaatgctcttagaatagat 465 Query: 301 ccagacaatattgaaattttgcgtgacttgtcacttctccaggcgcanatgagggacttg 360 || || || ||||||| | | ||| | |||||||| ||||| || ||| ||||||| Sbjct: 466 cctgataaccttgaaatactcagagacctctcacttctgcaggcacaaatgcgggactta 525 Query: 361 tctggctttgttgagactagacaacagcttctgacattaaagccaaaccaccgtatgaac 420 || || ||||| ||||| || || |||||| ||||||| ||||| || ||||| |||||| Sbjct: 526 tccggttttgtggagaccaggcagcagcttttgacattgaagcctaatcaccgaatgaac 585 Query: 421 tggattggctttgctgtatctcatcatt 448 |||||||||||||| || ||||| |||| Sbjct: 586 tggattggctttgcagtctctcagcatt 613
>dbj|AK118131.1| Arabidopsis thaliana At1g80410 mRNA for putative N-terminal acetyltransferase, complete cds, clone: RAFL19-43-D16 Length = 3153 Score = 224 bits (113), Expect = 2e-55 Identities = 364/448 (81%) Strand = Plus / Plus Query: 1 aaggaggccaacctcttcaaagtcatcgtcaaatcatatgaaactaagcagtataagaaa 60 |||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||| Sbjct: 170 aaggaggccaacctcttcaagctcatcgtcaaatcatatgagactaagcagtacaagaag 229 Query: 61 gggttgaaggccgcagattccatgttaaagaagttccctgaacatggagaaactttatcg 120 || | ||||| || ||| |||| ||||| ||||| ||||| |||||||| ||||||||| Sbjct: 230 ggactcaaggcagctgatgccatattaaaaaagtttcctgatcatggagagactttatcg 289 Query: 121 atgaaaggtttgacactaaattgcatggatcggaaatctgaagcatacgagctcgttcgc 180 |||||||| |||| ||||| || ||||| || ||| |||||||||| ||||| ||||| Sbjct: 290 atgaaaggactgactctaaactgtatggaccgcaaaactgaagcatatgagcttgttcga 349 Query: 181 cgtggattgaagaatgatctgaagagtcatgtatgctggcatgtctatggtttgctttac 240 | |||| ||||||||||| | || || ||||| ||||||||||| |||| | | ||| Sbjct: 350 cttggagtgaagaatgatatcaaaagccatgtttgctggcatgtgcttggtcttttgtac 409 Query: 241 agatcagatagagaatacagagaagctataaaatgttacagaaatgctttgaggattgat 300 | ||||| ||||| || |||||||| || ||||| ||| |||||||| | || || ||| Sbjct: 410 cggtcagacagagagtatagagaagcaatcaaatgctaccgaaatgctcttagaatagat 469 Query: 301 ccagacaatattgaaattttgcgtgacttgtcacttctccaggcgcanatgagggacttg 360 || || || ||||||| | | ||| | |||||||| ||||| || ||| ||||||| Sbjct: 470 cctgataaccttgaaatactcagagacctctcacttctgcaggcacaaatgcgggactta 529 Query: 361 tctggctttgttgagactagacaacagcttctgacattaaagccaaaccaccgtatgaac 420 || || ||||| ||||| || || |||||| ||||||| ||||| || ||||| |||||| Sbjct: 530 tccggttttgtggagaccaggcagcagcttttgacattgaagcctaatcaccgaatgaac 589 Query: 421 tggattggctttgctgtatctcatcatt 448 |||||||||||||| || ||||| |||| Sbjct: 590 tggattggctttgcagtctctcagcatt 617
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 200 bits (101), Expect = 3e-48 Identities = 140/153 (91%) Strand = Plus / Minus Query: 191 agaatgatctgaagagtcatgtatgctggcatgtctatggtttgctttacagatcagata 250 |||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||| | Sbjct: 24541321 agaatgatctgaagagtcatgtgtgctggcatgtctatggcttgctttatcgatcagaca 24541262 Query: 251 gagaatacagagaagctataaaatgttacagaaatgctttgaggattgatccagacaata 310 |||||||||||||||| ||||||||||||||||||||| |||||||||||||||| || | Sbjct: 24541261 gagaatacagagaagccataaaatgttacagaaatgctctgaggattgatccagataaca 24541202 Query: 311 ttgaaattttgcgtgacttgtcacttctccagg 343 | |||||| | |||||| ||||||||||||||| Sbjct: 24541201 tagaaattctacgtgacctgtcacttctccagg 24541169 Score = 121 bits (61), Expect = 2e-24 Identities = 79/85 (92%) Strand = Plus / Minus Query: 108 agaaactttatcgatgaaaggtttgacactaaattgcatggatcggaaatctgaagcata 167 |||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 24541494 agaaaccttatcaatgaaaggtttgacgctaaattgcatggatcggaaatctgaagcata 24541435 Query: 168 cgagctcgttcgccgtggattgaag 192 || || |||||||||||||||||| Sbjct: 24541434 tgaacttgttcgccgtggattgaag 24541410 Score = 115 bits (58), Expect = 1e-22 Identities = 96/109 (88%) Strand = Plus / Minus Query: 340 caggcgcanatgagggacttgtctggctttgttgagactagacaacagcttctgacatta 399 ||||| || |||||||||||||||||||||||||||||||| ||||| ||| | ||| | Sbjct: 24540775 caggcacaaatgagggacttgtctggctttgttgagactaggcaacaacttttaacactg 24540716 Query: 400 aagccaaaccaccgtatgaactggattggctttgctgtatctcatcatt 448 |||||||| ||||| |||||||||||||| ||||||||| |||| |||| Sbjct: 24540715 aagccaaatcaccgcatgaactggattggttttgctgtagctcaccatt 24540667 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 31 aaatcatatgaaactaagcagtataagaaagggttgaaggccgcagattccatgttaaag 90 ||||| ||||| || ||||| |||||||| || ||||||| ||||||||||| |||||| Sbjct: 24541669 aaatcctatgagacaaagcaatataagaagggcctgaaggcagcagattccattttaaag 24541610 Query: 91 aagttccctgaacatgg 107 ||||||||||| ||||| Sbjct: 24541609 aagttccctgagcatgg 24541593 Score = 60.0 bits (30), Expect = 6e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 1 aaggaggccaacctcttcaaagtcatcgtc 30 |||||||||||||||||||||||||||||| Sbjct: 24542674 aaggaggccaacctcttcaaagtcatcgtc 24542645
>dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0686E09 Length = 156425 Score = 200 bits (101), Expect = 3e-48 Identities = 140/153 (91%) Strand = Plus / Minus Query: 191 agaatgatctgaagagtcatgtatgctggcatgtctatggtttgctttacagatcagata 250 |||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||| | Sbjct: 121705 agaatgatctgaagagtcatgtgtgctggcatgtctatggcttgctttatcgatcagaca 121646 Query: 251 gagaatacagagaagctataaaatgttacagaaatgctttgaggattgatccagacaata 310 |||||||||||||||| ||||||||||||||||||||| |||||||||||||||| || | Sbjct: 121645 gagaatacagagaagccataaaatgttacagaaatgctctgaggattgatccagataaca 121586 Query: 311 ttgaaattttgcgtgacttgtcacttctccagg 343 | |||||| | |||||| ||||||||||||||| Sbjct: 121585 tagaaattctacgtgacctgtcacttctccagg 121553 Score = 121 bits (61), Expect = 2e-24 Identities = 79/85 (92%) Strand = Plus / Minus Query: 108 agaaactttatcgatgaaaggtttgacactaaattgcatggatcggaaatctgaagcata 167 |||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 121878 agaaaccttatcaatgaaaggtttgacgctaaattgcatggatcggaaatctgaagcata 121819 Query: 168 cgagctcgttcgccgtggattgaag 192 || || |||||||||||||||||| Sbjct: 121818 tgaacttgttcgccgtggattgaag 121794 Score = 115 bits (58), Expect = 1e-22 Identities = 96/109 (88%) Strand = Plus / Minus Query: 340 caggcgcanatgagggacttgtctggctttgttgagactagacaacagcttctgacatta 399 ||||| || |||||||||||||||||||||||||||||||| ||||| ||| | ||| | Sbjct: 121159 caggcacaaatgagggacttgtctggctttgttgagactaggcaacaacttttaacactg 121100 Query: 400 aagccaaaccaccgtatgaactggattggctttgctgtatctcatcatt 448 |||||||| ||||| |||||||||||||| ||||||||| |||| |||| Sbjct: 121099 aagccaaatcaccgcatgaactggattggttttgctgtagctcaccatt 121051 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 31 aaatcatatgaaactaagcagtataagaaagggttgaaggccgcagattccatgttaaag 90 ||||| ||||| || ||||| |||||||| || ||||||| ||||||||||| |||||| Sbjct: 122053 aaatcctatgagacaaagcaatataagaagggcctgaaggcagcagattccattttaaag 121994 Query: 91 aagttccctgaacatgg 107 ||||||||||| ||||| Sbjct: 121993 aagttccctgagcatgg 121977 Score = 60.0 bits (30), Expect = 6e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 1 aaggaggccaacctcttcaaagtcatcgtc 30 |||||||||||||||||||||||||||||| Sbjct: 123058 aaggaggccaacctcttcaaagtcatcgtc 123029
>dbj|AP006130.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT36O13, TM0226, complete sequence Length = 140838 Score = 89.7 bits (45), Expect = 7e-15 Identities = 75/85 (88%) Strand = Plus / Plus Query: 108 agaaactttatcgatgaaaggtttgacactaaattgcatggatcggaaatctgaagcata 167 |||||||||||||||||| || |||||| |||||||||||||||| |||||||||||||| Sbjct: 22546 agaaactttatcgatgaagggcttgacattaaattgcatggatcgtaaatctgaagcata 22605 Query: 168 cgagctcgttcgccgtggattgaag 192 || || ||||| | ||||||||| Sbjct: 22606 tgaccttgttcgtcaaggattgaag 22630 Score = 65.9 bits (33), Expect = 1e-07 Identities = 111/137 (81%) Strand = Plus / Plus Query: 191 agaatgatctgaagagtcatgtatgctggcatgtctatggtttgctttacagatcagata 250 ||||||| || || |||||||| ||||||||||| | ||| | ||||| ||||||| | Sbjct: 22720 agaatgaccttaaaagtcatgtttgctggcatgtttttggactcctttatcgatcagaca 22779 Query: 251 gagaatacagagaagctataaaatgttacagaaatgctttgaggattgatccagacaata 310 |||||||||| || || || || || ||| ||||||| ||| || ||||| ||||||| Sbjct: 22780 gagaatacagggaggcaatcaagtgctaccgaaatgcactgaaaatagatcctgacaata 22839 Query: 311 ttgaaattttgcgtgac 327 |||||||| |||||||| Sbjct: 22840 ttgaaattctgcgtgac 22856 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 364 ggctttgttgagactagacaacagcttctgacattaaagccaaaccaccgtatgaactgg 423 |||||||||||||| ||||| || ||| |||| | |||||||| || || ||||||||| Sbjct: 24335 ggctttgttgagaccagacagcaacttttgactctgaagccaaatcatcgcatgaactgg 24394 Query: 424 attgg 428 ||||| Sbjct: 24395 attgg 24399 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 31 aaatcatatgaaactaagcagtataagaa 59 |||||||||||||| ||||| |||||||| Sbjct: 22260 aaatcatatgaaaccaagcaatataagaa 22288 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aaggaggccaacctcttcaa 20 |||||||||||||||||||| Sbjct: 21553 aaggaggccaacctcttcaa 21572
>dbj|AP006644.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT06I23, TM0253, complete sequence Length = 85813 Score = 83.8 bits (42), Expect = 4e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 362 ctggctttgttgagactagacaacagcttctgacattaaagccaaaccaccgtatgaact 421 |||||||||||||||| | |||||||||||||| | ||||||||||| || ||||| | Sbjct: 21230 ctggctttgttgagacacggcaacagcttctgactctcaagccaaaccatcgcatgaatt 21171 Query: 422 ggattggctttgctgtatctcatcat 447 |||||||||||||||| || |||||| Sbjct: 21170 ggattggctttgctgtttcacatcat 21145 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 108 agaaactttatcgatgaaaggtttgacactaaattgcatggatcggaaatctgaagcata 167 |||||||||||||||||| ||||||||| ||||||| |||||||| ||| |||| ||||| Sbjct: 22132 agaaactttatcgatgaagggtttgacattaaattgtatggatcgtaaacctgaggcata 22073 Score = 69.9 bits (35), Expect = 7e-09 Identities = 104/127 (81%) Strand = Plus / Minus Query: 191 agaatgatctgaagagtcatgtatgctggcatgtctatggtttgctttacagatcagata 250 ||||||||||||| |||||||| ||||||||||| | |||| | ||||| | ||||| | Sbjct: 21962 agaatgatctgaaaagtcatgtttgctggcatgtttttggtctcctttatcggtcagaca 21903 Query: 251 gagaatacagagaagctataaaatgttacagaaatgctttgaggattgatccagacaata 310 |||| || || ||||| || || || ||| | ||||| ||| |||||||||||||||| Sbjct: 21902 gagattatagggaagcgatcaagtgctaccgtaatgcactgaaaattgatccagacaata 21843 Query: 311 ttgaaat 317 ||||||| Sbjct: 21842 ttgaaat 21836
>gb|AC018848.6|AC018848 Arabidopsis thaliana chromosome 1 BAC F5I6 genomic sequence, complete sequence Length = 132990 Score = 73.8 bits (37), Expect = 4e-10 Identities = 90/108 (83%) Strand = Plus / Minus Query: 341 aggcgcanatgagggacttgtctggctttgttgagactagacaacagcttctgacattaa 400 |||| || ||| ||||||| || || ||||| ||||| || || |||||| ||||||| | Sbjct: 60844 aggcacaaatgcgggacttatccggttttgtggagaccaggcagcagcttttgacattga 60785 Query: 401 agccaaaccaccgtatgaactggattggctttgctgtatctcatcatt 448 |||| || ||||| |||||||||||||||||||| || ||||| |||| Sbjct: 60784 agcctaatcaccgaatgaactggattggctttgcagtctctcagcatt 60737 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 112 actttatcgatgaaaggtttgacactaaattgcatggatcggaaatctgaagcatacgag 171 ||||||||||||||||| |||| ||||| || ||||| || ||| |||||||||| ||| Sbjct: 61349 actttatcgatgaaaggactgactctaaactgtatggaccgcaaaactgaagcatatgag 61290 Query: 172 ctcgttcgccgtggattgaag 192 || ||||| | |||| ||||| Sbjct: 61289 cttgttcgacttggagtgaag 61269 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 31 aaatcatatgaaactaagcagtataagaaagggttgaaggccgcagattccatgttaaag 90 ||||||||||| ||||||||||| ||||| || | ||||| || ||| |||| ||||| Sbjct: 61814 aaatcatatgagactaagcagtacaagaagggactcaaggcagctgatgccatattaaaa 61755 Query: 91 aagttccctgaacatggag 109 ||||| ||||| ||||||| Sbjct: 61754 aagtttcctgatcatggag 61736 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1 aaggaggccaacctcttcaaagtcatcgtc 30 |||||||||||||||||||| |||||||| Sbjct: 62331 aaggaggccaacctcttcaagctcatcgtc 62302
>gb|AC018849.2|AC018849 Arabidopsis thaliana chromosome 1 BAC T21F11 genomic sequence, complete sequence Length = 89811 Score = 73.8 bits (37), Expect = 4e-10 Identities = 90/108 (83%) Strand = Plus / Plus Query: 341 aggcgcanatgagggacttgtctggctttgttgagactagacaacagcttctgacattaa 400 |||| || ||| ||||||| || || ||||| ||||| || || |||||| ||||||| | Sbjct: 85306 aggcacaaatgcgggacttatccggttttgtggagaccaggcagcagcttttgacattga 85365 Query: 401 agccaaaccaccgtatgaactggattggctttgctgtatctcatcatt 448 |||| || ||||| |||||||||||||||||||| || ||||| |||| Sbjct: 85366 agcctaatcaccgaatgaactggattggctttgcagtctctcagcatt 85413 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 112 actttatcgatgaaaggtttgacactaaattgcatggatcggaaatctgaagcatacgag 171 ||||||||||||||||| |||| ||||| || ||||| || ||| |||||||||| ||| Sbjct: 84801 actttatcgatgaaaggactgactctaaactgtatggaccgcaaaactgaagcatatgag 84860 Query: 172 ctcgttcgccgtggattgaag 192 || ||||| | |||| ||||| Sbjct: 84861 cttgttcgacttggagtgaag 84881 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 31 aaatcatatgaaactaagcagtataagaaagggttgaaggccgcagattccatgttaaag 90 ||||||||||| ||||||||||| ||||| || | ||||| || ||| |||| ||||| Sbjct: 84336 aaatcatatgagactaagcagtacaagaagggactcaaggcagctgatgccatattaaaa 84395 Query: 91 aagttccctgaacatggag 109 ||||| ||||| ||||||| Sbjct: 84396 aagtttcctgatcatggag 84414 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1 aaggaggccaacctcttcaaagtcatcgtc 30 |||||||||||||||||||| |||||||| Sbjct: 83819 aaggaggccaacctcttcaagctcatcgtc 83848
>ref|NM_192805.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 360 Score = 60.0 bits (30), Expect = 6e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 1 aaggaggccaacctcttcaaagtcatcgtc 30 |||||||||||||||||||||||||||||| Sbjct: 300 aaggaggccaacctcttcaaagtcatcgtc 271
>gb|BC064592.1| Homo sapiens NMDA receptor regulated 1-like, mRNA (cDNA clone IMAGE:5759439), complete cds Length = 1795 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 262 gaagctataaaatgttacagaaatgc 287 |||||||||||||||||| ||||||| Sbjct: 541 gaagctataaaatgttaccgaaatgc 566
>ref|XM_584106.2| PREDICTED: Bos taurus similar to NMDA receptor regulated 1-like protein isoform 1 (LOC538989), mRNA Length = 2349 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 262 gaagctataaaatgttacagaaatgc 287 |||||||| ||||||||||||||||| Sbjct: 292 gaagctattaaatgttacagaaatgc 317
>ref|NM_024561.3| Homo sapiens NMDA receptor regulated 1-like (NARG1L), transcript variant 1, mRNA Length = 4266 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 262 gaagctataaaatgttacagaaatgc 287 |||||||||||||||||| ||||||| Sbjct: 539 gaagctataaaatgttaccgaaatgc 564
>ref|NM_018527.2| Homo sapiens NMDA receptor regulated 1-like (NARG1L), transcript variant 2, mRNA Length = 1692 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 262 gaagctataaaatgttacagaaatgc 287 |||||||||||||||||| ||||||| Sbjct: 539 gaagctataaaatgttaccgaaatgc 564
>emb|AL590665.9| Human DNA sequence from clone RP11-229H11 on chromosome 13 Contains part of the gene for a novel TPR domain containing protein, complete sequence Length = 52758 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 262 gaagctataaaatgttacagaaatgc 287 |||||||||||||||||| ||||||| Sbjct: 946 gaagctataaaatgttaccgaaatgc 971
>emb|AL354696.11| Human DNA sequence from clone RP11-74J13 on chromosome 13 Contains a novel gene (FLJ30271, FLJ13413, DKFZp547M073), a calmodulin pseudogene, a novel gene (DKFZP434E2318), the MTFR1 gene for mitochondrial translational release factor 1 (RF1, MTTRF1), a ras homolog gene family, member G (rho G) (ARHG) pseudogene, the 5' end of the gene for a novel TPR domain containing protein and 3 CpG islands, complete sequence Length = 202565 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 262 gaagctataaaatgttacagaaatgc 287 |||||||||||||||||| ||||||| Sbjct: 201511 gaagctataaaatgttaccgaaatgc 201536
>emb|BX640665.1|HSM806722 Homo sapiens mRNA; cDNA DKFZp686O08147 (from clone DKFZp686O08147) Length = 4236 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 262 gaagctataaaatgttacagaaatgc 287 |||||||||||||||||| ||||||| Sbjct: 510 gaagctataaaatgttaccgaaatgc 535
>dbj|AK097224.1| Homo sapiens cDNA FLJ39905 fis, clone SPLEN2017351, moderately similar to Xenopus laevis N-terminal acetyltransferase mRNA Length = 2776 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 262 gaagctataaaatgttacagaaatgc 287 |||||||||||||||||| ||||||| Sbjct: 526 gaagctataaaatgttaccgaaatgc 551
>gb|BC032318.1| Homo sapiens NMDA receptor regulated 1-like, transcript variant 2, mRNA (cDNA clone IMAGE:5222662), complete cds Length = 1692 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 262 gaagctataaaatgttacagaaatgc 287 |||||||||||||||||| ||||||| Sbjct: 539 gaagctataaaatgttaccgaaatgc 564
>gb|AC165260.2| Mus musculus BAC clone RP23-123E17 from chromosome 13, complete sequence Length = 209914 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 278 acagaaatgctttgaggattg 298 ||||||||||||||||||||| Sbjct: 191791 acagaaatgctttgaggattg 191771
>ref|XM_742762.1| Aspergillus fumigatus Af293 MFS toxin efflux pump (Afu6g02220) partial mRNA Length = 1911 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 255 atacagagaagctataaaatg 275 ||||||||||||||||||||| Sbjct: 1090 atacagagaagctataaaatg 1070
>gb|AF247679.1| Xenopus laevis putative N-terminal acetyltransferase mRNA, complete cds Length = 3324 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 192 gaatgatctgaagagtcatgtatgctggcatgt 224 ||||||||| ||||| ||||| ||||||||||| Sbjct: 326 gaatgatcttaagagccatgtctgctggcatgt 358
>gb|AF000263.1| Caenorhabditis elegans cosmid T08B2, complete sequence Length = 28189 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 aatattgaaattttgcgtgac 327 ||||||||||||||||||||| Sbjct: 7422 aatattgaaattttgcgtgac 7442
>dbj|AP006132.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT41P23, TM0230, complete sequence Length = 91079 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 tgttacagaaatgctttgagg 294 ||||||||||||||||||||| Sbjct: 16881 tgttacagaaatgctttgagg 16901
>gb|AC022682.16| Mus musculus chromosome 13, clone RP23-476E21, complete sequence Length = 183905 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 agtataagaaagggttgaag 69 |||||||||||||||||||| Sbjct: 77805 agtataagaaagggttgaag 77786
>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence Length = 3281944 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 ctggctttgttgagactaga 381 |||||||||||||||||||| Sbjct: 1671329 ctggctttgttgagactaga 1671348
>emb|AL356117.16| Human DNA sequence from clone RP11-258G21 on chromosome 6 Contains part of the BAI3 gene for brain-specific angiogenesis inhibitor 3, complete sequence Length = 127079 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tataaaatgttacagaaatg 286 |||||||||||||||||||| Sbjct: 19520 tataaaatgttacagaaatg 19501
>emb|AL121914.31|HSJ1167H4 Human DNA sequence from clone RP5-1167H4 on chromosome 20 Contains the C20orf108 gene, the STK6 gene for serine/threonine kinase 6, the CSTF1 gene for cleavage stimulation factor 3' pre-RNA subunit 1 (50 kDa), the C20orf32 gene for a novel SH3 domain-containing protein (HEF like protein, HEFL), the RPL39P gene for ribosomal protein L39 pseudogene and two CpG islands, complete sequence Length = 135693 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 tggtttgctttacagatcag 247 |||||||||||||||||||| Sbjct: 20877 tggtttgctttacagatcag 20896
>gb|AC106708.7| Homo sapiens 3 BAC RP11-392A22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 127109 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 catcgtcaaatcatatgaaa 43 |||||||||||||||||||| Sbjct: 57086 catcgtcaaatcatatgaaa 57105
>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence Length = 3354505 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 ctggctttgttgagactaga 381 |||||||||||||||||||| Sbjct: 2756956 ctggctttgttgagactaga 2756937
>gb|AC092185.3| Homo sapiens 3q BAC RP11-148O7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165962 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 agaagctataaaatgttaca 280 |||||||||||||||||||| Sbjct: 91575 agaagctataaaatgttaca 91556
>dbj|AK035328.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530018C24 product:unclassifiable, full insert sequence Length = 1702 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 agtataagaaagggttgaag 69 |||||||||||||||||||| Sbjct: 527 agtataagaaagggttgaag 546
>emb|BX072529.5| Zebrafish DNA sequence from clone DKEY-20D17 in linkage group 7, complete sequence Length = 223845 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tataaaatgttacagaaatg 286 |||||||||||||||||||| Sbjct: 178577 tataaaatgttacagaaatg 178558
>gb|AC102476.14| Mus musculus chromosome 5, clone RP24-396L12, complete sequence Length = 181047 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 367 tttgttgagactagacaacagctt 390 ||||||||||||||| |||||||| Sbjct: 64818 tttgttgagactagaaaacagctt 64795
>emb|AL929381.9| Mouse DNA sequence from clone RP23-266K3 on chromosome 2, complete sequence Length = 112349 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 tggtttgctttacagatcag 247 |||||||||||||||||||| Sbjct: 20761 tggtttgctttacagatcag 20742
>dbj|AP005433.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-945C19, complete sequence Length = 146000 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 agtcatgtatgctggcatgt 224 |||||||||||||||||||| Sbjct: 27652 agtcatgtatgctggcatgt 27633 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,167,200 Number of Sequences: 3902068 Number of extensions: 4167200 Number of successful extensions: 82627 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 39 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 82481 Number of HSP's gapped (non-prelim): 145 length of query: 448 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 426 effective length of database: 17,147,199,772 effective search space: 7304707102872 effective search space used: 7304707102872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)