>IPO11_HUMAN (Q9UI26) Importin-11 (Imp11) (Ran-binding protein 11) (RanBP11)|
          Length = 975

 Score = 34.7 bits (78), Expect = 0.10
 Identities = 25/65 (38%), Positives = 31/65 (47%)
 Frame = +1

Query: 235 SMSLDVTQILLSAQSADGSIRKHAEESLKQFQEQNLPGFXXXXXXELANNEKPEESRRLA 414
           S S  V Q+L  A S D ++ K AEE LKQ++ Q  PGF         N+      R LA
Sbjct: 5   SASTVVLQVLTQATSQDTAVLKPAEEQLKQWETQ--PGFYSVLLNIFTNHTLDINVRWLA 62

Query: 415 GLILK 429
            L  K
Sbjct: 63  VLYFK 67

>IPO11_MOUSE (Q8K2V6) Importin-11 (Imp11) (Ran-binding protein 11) (RanBP11)|
          Length = 975

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 25/65 (38%), Positives = 31/65 (47%)
 Frame = +1

Query: 235 SMSLDVTQILLSAQSADGSIRKHAEESLKQFQEQNLPGFXXXXXXELANNEKPEESRRLA 414
           S S  V Q+L  A S D ++ K AEE LKQ++ Q  PGF         N+      R LA
Sbjct: 5   SASSVVLQVLTQATSQDTAVLKPAEEQLKQWETQ--PGFYSVLLNIFTNHTLDINVRWLA 62

Query: 415 GLILK 429
            L  K
Sbjct: 63  VLYFK 67

>PARD3_RAT (Q9Z340) Partitioning-defective 3 homolog (PARD-3) (PAR-3)|
           (Atypical PKC isotype-specific-interacting protein)
           (ASIP) (Atypical PKC-specific-binding protein) (ASBP)
          Length = 1337

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 8/58 (13%)
 Frame = +2

Query: 89  GLAPSPNRRATASAPSRDLGRLKLRRAVQLRHT--------RRRQLPPHLSSQQEESA 238
           GL  SP R A  S    + G+ +L   V + H         R   LPPHLS Q   S+
Sbjct: 724 GLDESPTRNAALSRIMGESGKCQLSPTVNMPHDDTVMIEDDRLPVLPPHLSDQSSSSS 781

>PARD3_MOUSE (Q99NH2) Partitioning-defective 3 homolog (PARD-3) (PAR-3)|
           (Atypical PKC isotype-specific-interacting protein)
           (ASIP) (Ephrin-interacting protein) (PHIP)
          Length = 1333

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 8/58 (13%)
 Frame = +2

Query: 89  GLAPSPNRRATASAPSRDLGRLKLRRAVQLRHT--------RRRQLPPHLSSQQEESA 238
           GL  SP R A   A SR +G+ +L   V + H         R   LPPHLS Q   S+
Sbjct: 724 GLDESPTRNA---ALSRIMGKCQLSPTVNMPHDDTVMIEDDRLPVLPPHLSDQSSSSS 778

>IMB1_SCHPO (O13864) Importin beta-1 subunit (Karyopherin beta-1 subunit)|
           (Importin 95)
          Length = 863

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 17/62 (27%), Positives = 28/62 (45%)
 Frame = +1

Query: 244 LDVTQILLSAQSADGSIRKHAEESLKQFQEQNLPGFXXXXXXELANNEKPEESRRLAGLI 423
           ++  + L    S D ++R +AE+ L+     +   +      ELAN+      R  AGL 
Sbjct: 1   MNAGEFLAQTLSPDANVRLNAEKQLENAARTDFAQYMVLLAQELANDNSMPYIRMAAGLA 60

Query: 424 LK 429
           LK
Sbjct: 61  LK 62

>MDHP_MESCR (Q05145) Malate dehydrogenase [NADP], chloroplast precursor (EC|
           1.1.1.82) (NADP-MDH)
          Length = 441

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = -2

Query: 426 EDQTSQPAALLRFLVVGQLT*EGEQKTWEVLLLKLLEAFFSMLSNRAISRLRTQE 262
           E QT +P     F +   L  E E KTW+ ++   +     M+SN  + +L + E
Sbjct: 67  EGQTGKPECYGIFCLTYDLKAEEETKTWKKMITIAVSGAAGMISNHLLFKLASGE 121

>DP2L_THEVO (Q97CR6) DNA polymerase II large subunit (EC 2.7.7.7) (Pol II)|
          Length = 1088

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 8/53 (15%)
 Frame = +1

Query: 286  GSIRKHAEESLKQFQEQNLPGFXXXXXXELA--------NNEKPEESRRLAGL 420
            GS+ K+ +E+LK  +E N+P +       LA        + EKP+ + ++ GL
Sbjct: 1033 GSVIKYLDETLKIEKEYNIPKYLKERIDNLARTIKETFPDEEKPDAAIKITGL 1085

>CCD27_HUMAN (Q2M243) Coiled-coil domain-containing protein 27|
          Length = 656

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 21/46 (45%), Positives = 22/46 (47%)
 Frame = +2

Query: 101 SPNRRATASAPSRDLGRLKLRRAVQLRHTRRRQLPPHLSSQQEESA 238
           SP RR   S  S  LGRL L +A   RH    Q   H    QEESA
Sbjct: 283 SPGRREQLSDASLKLGRLSLLKAFS-RHEEELQ---HWWQMQEESA 324

>CAPK_STAAU (P39860) Protein capK|
          Length = 449

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +1

Query: 250 VTQILLSAQSADGSIRKHAEESLKQFQEQNLPGF 351
           + Q+++SA  ADG   K+  + L +FQ + L G+
Sbjct: 183 LNQLMISAYHADGENLKYYIKKLNKFQPETLDGY 216

>PARD3_HUMAN (Q8TEW0) Partitioning-defective 3 homolog (PARD-3) (PAR-3)|
           (Atypical PKC isotype-specific-interacting protein)
           (ASIP) (CTCL tumor antigen se2-5) (PAR3-alpha)
          Length = 1356

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 8/58 (13%)
 Frame = +2

Query: 89  GLAPSPNRRATASAPSRDLGRLKLRRAVQL--------RHTRRRQLPPHLSSQQEESA 238
           GL  SP+R A  S    + G+ +L   V +           R   LPPHLS Q   S+
Sbjct: 724 GLDESPSRNAALSRIMGESGKYQLSPTVNMPQDDTVIIEDDRLPVLPPHLSDQSSSSS 781


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.313    0.129    0.349 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,150,935
Number of Sequences: 219361
Number of extensions: 615784
Number of successful extensions: 1292
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1292
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)