>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete
             sequence
          Length = 141307

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                           
Query: 156   gcgtggcacctcctcaccgtgctcatccgc 185
             ||||||||||||||||||||| ||||||||
Sbjct: 43016 gcgtggcacctcctcaccgtggtcatccgc 43045



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 262   acgtcgagcggctgtgccacgcccccggatcgccgct 298
             |||||||||||||||||| |  |||||| ||||||||
Sbjct: 43098 acgtcgagcggctgtgccgcatccccgggtcgccgct 43134

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                              
Query: 156      gcgtggcacctcctcaccgtgctcatccgc 185
                ||||||||||||||||||||| ||||||||
Sbjct: 21728333 gcgtggcacctcctcaccgtggtcatccgc 21728362



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 262      acgtcgagcggctgtgccacgcccccggatcgccgct 298
                |||||||||||||||||| |  |||||| ||||||||
Sbjct: 21728415 acgtcgagcggctgtgccgcatccccgggtcgccgct 21728451



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 125      cgccggcgccggctcgtggg 144
                ||||||||||||||||||||
Sbjct: 16997631 cgccggcgccggctcgtggg 16997612



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 124     ccgccggcgccggctcgtgg 143
               ||||||||||||||||||||
Sbjct: 7415098 ccgccggcgccggctcgtgg 7415079

>dbj|AK110827.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-H09, full
           insert sequence
          Length = 1470

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 156 gcgtggcacctcctcaccgtgctcatccgc 185
           ||||||||||||||||||||| ||||||||
Sbjct: 139 gcgtggcacctcctcaccgtggtcatccgc 168



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 262 acgtcgagcggctgtgccacgcccccggatcgccgct 298
           |||||||||||||||||| |  |||||| ||||||||
Sbjct: 221 acgtcgagcggctgtgccgcatccccgggtcgccgct 257

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                              
Query: 156      gcgtggcacctcctcaccgtgctcatccgc 185
                ||||||||||||||||||||| ||||||||
Sbjct: 21739996 gcgtggcacctcctcaccgtggtcatccgc 21740025



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 262      acgtcgagcggctgtgccacgcccccggatcgccgct 298
                |||||||||||||||||| |  |||||| ||||||||
Sbjct: 21740078 acgtcgagcggctgtgccgcatccccgggtcgccgct 21740114



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 125      cgccggcgccggctcgtggg 144
                ||||||||||||||||||||
Sbjct: 17006671 cgccggcgccggctcgtggg 17006652



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 124     ccgccggcgccggctcgtgg 143
               ||||||||||||||||||||
Sbjct: 7419297 ccgccggcgccggctcgtgg 7419278

>dbj|AK101930.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073C12, full
           insert sequence
          Length = 2520

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 156 gcgtggcacctcctcaccgtgctcatccgc 185
           |||||| |||||||||||||| ||||||||
Sbjct: 163 gcgtggtacctcctcaccgtggtcatccgc 192



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 262 acgtcgagcggctgtgccacgcccccggatcgccgct 298
           |||||||||||||||||| |  |||||| ||||||||
Sbjct: 245 acgtcgagcggctgtgccgcatccccgggtcgccgct 281

>gb|BT018289.1| Zea mays clone EL01T0205D02.c mRNA sequence
          Length = 1539

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 112 tggatcccgctgccgccggcgccgg 136
           |||||| ||||||||||||||||||
Sbjct: 107 tggatctcgctgccgccggcgccgg 131

>gb|AE009318.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 88 of
            187 of the complete sequence
          Length = 11831

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 320  gaccgtctcggcgacggccgtcgtggcgt 348
            |||||||||||| |||| |||||||||||
Sbjct: 7766 gaccgtctcggcaacgggcgtcgtggcgt 7794

>gb|AE008296.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 100 of
            187 of the complete sequence
          Length = 10280

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 320  gaccgtctcggcgacggccgtcgtggcgt 348
            |||||||||||| |||| |||||||||||
Sbjct: 5393 gaccgtctcggcaacgggcgtcgtggcgt 5365

>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 253     cgccgcagcacgtcgagcggctgtg 277
               ||||||||| |||||||||||||||
Sbjct: 3011479 cgccgcagcgcgtcgagcggctgtg 3011455

>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 118     ccgctgccgccggcgccggct 138
               |||||||||||||||||||||
Sbjct: 2170571 ccgctgccgccggcgccggct 2170591

>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 306     tccggcggcacggtgaccgt 325
               ||||||||||||||||||||
Sbjct: 3506806 tccggcggcacggtgaccgt 3506825

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 118     ccgctgccgccggcgccggc 137
               ||||||||||||||||||||
Sbjct: 7490178 ccgctgccgccggcgccggc 7490159

>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome
          Length = 135301

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 118    ccgctgccgccggcgccggc 137
              ||||||||||||||||||||
Sbjct: 131973 ccgctgccgccggcgccggc 131954



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 118    ccgctgccgccggcgccggc 137
              ||||||||||||||||||||
Sbjct: 106245 ccgctgccgccggcgccggc 106264

>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29
          Length = 310550

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 326    ctcggcgacggccgtcgtggcgtt 349
              |||||||||||||| |||||||||
Sbjct: 145976 ctcggcgacggccgacgtggcgtt 145953

>gb|AC091735.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0082N11, from chromosome 10, complete sequence
          Length = 183345

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   ccgccggcgccggctcgtgg 143
             ||||||||||||||||||||
Sbjct: 48962 ccgccggcgccggctcgtgg 48943

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 124      ccgccggcgccggctcgtgg 143
                ||||||||||||||||||||
Sbjct: 13582484 ccgccggcgccggctcgtgg 13582503

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 118     ccgctgccgccggcgccggc 137
               ||||||||||||||||||||
Sbjct: 7488013 ccgctgccgccggcgccggc 7487994

>gb|AC069145.5|AC069145 Oryza sativa chromosome 10 BAC OSJNBb0094K03 genomic sequence, complete
             sequence
          Length = 135216

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   cgccggcgccggctcgtggg 144
             ||||||||||||||||||||
Sbjct: 38123 cgccggcgccggctcgtggg 38104

>gb|AC134239.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0042A11, complete sequence
          Length = 113049

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   ccgctgccgccggcgccggc 137
             ||||||||||||||||||||
Sbjct: 19074 ccgctgccgccggcgccggc 19055

>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 316     cggtgaccgtctcggcgacg 335
               ||||||||||||||||||||
Sbjct: 1324537 cggtgaccgtctcggcgacg 1324556

>ref|XM_579464.1| PREDICTED: Rattus norvegicus progesterone receptor (Pgr), mRNA
          Length = 3064

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 116  tcccgctgccgccggcgccg 135
            ||||||||||||||||||||
Sbjct: 1250 tcccgctgccgccggcgccg 1269

>dbj|AB114300.1| Vargula hilgendorfii mitochondrial DNA, complete genome
          Length = 15923

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 38   ccctacggggaattccatgc 57
            ||||||||||||||||||||
Sbjct: 4274 ccctacggggaattccatgc 4293

>emb|AJ323613.1|HSA323613 Homo sapiens genomic sequence surrounding NotI site, clone NB6-796R
          Length = 719

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 117 cccgctgccgccggcgccggctcg 140
           ||||||||||||||||||| ||||
Sbjct: 4   cccgctgccgccggcgccgtctcg 27

>dbj|AK069304.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010M20, full
           insert sequence
          Length = 1003

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 118 ccgctgccgccggcgccggc 137
           ||||||||||||||||||||
Sbjct: 279 ccgctgccgccggcgccggc 260

>dbj|AK065146.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002A22, full
           insert sequence
          Length = 1726

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 118 ccgctgccgccggcgccggc 137
           ||||||||||||||||||||
Sbjct: 899 ccgctgccgccggcgccggc 918

>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 320    gaccgtctcggcgacggccg 339
              ||||||||||||||||||||
Sbjct: 718060 gaccgtctcggcgacggccg 718079

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 124      ccgccggcgccggctcgtgg 143
                ||||||||||||||||||||
Sbjct: 13536758 ccgccggcgccggctcgtgg 13536777

>emb|AL731758.4|CNS08C87 Oryza sativa chromosome 12, . BAC OSJNBa0029K06 of library OSJNBa
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 154442

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 124  ccgccggcgccggctcgtgg 143
            ||||||||||||||||||||
Sbjct: 2755 ccgccggcgccggctcgtgg 2736

>emb|AL713929.5|CNS07YP6 Oryza sativa chromosome 12, . BAC OSJNBb0029H23 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 119798

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 124    ccgccggcgccggctcgtgg 143
              ||||||||||||||||||||
Sbjct: 114740 ccgccggcgccggctcgtgg 114721

>gb|L14320.1|HSBBICP4A Bovine herpesvirus type 1 early-intermediate transcription control
            protein (BICP4) gene, complete cds
          Length = 8113

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 118  ccgctgccgccggcgccggc 137
            ||||||||||||||||||||
Sbjct: 4786 ccgctgccgccggcgccggc 4767

>gb|L14321.1|HSBBICP4B Bovine herpesvirus type 1 immedidate-early transcriptional control
            protein (BICP4) gene, 5' end
          Length = 2764

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 118  ccgctgccgccggcgccggc 137
            ||||||||||||||||||||
Sbjct: 2034 ccgctgccgccggcgccggc 2015


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,311,076
Number of Sequences: 3902068
Number of extensions: 2311076
Number of successful extensions: 119691
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 118588
Number of HSP's gapped (non-prelim): 1103
length of query: 405
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 383
effective length of database: 17,147,199,772
effective search space: 6567377512676
effective search space used: 6567377512676
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)