Clone Name | bastl30f03 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK100219.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023046E22, full insert sequence Length = 1653 Score = 139 bits (70), Expect = 1e-29 Identities = 154/182 (84%) Strand = Plus / Plus Query: 242 aagcgcaagcgcgaggcgtccgccgctgccgccgccgcgctcgaggatttgaccctcatc 301 ||||||||||||| ||| |||||| ||||| |||||||| ||||| ||||||||| Sbjct: 244 aagcgcaagcgcgcggccagcgccgcggccgcggccgcgctggaggaccaaaccctcatc 303 Query: 302 gacatagtcaaacataatggcaggctaatcagccatgctgccaaaagattggtcgaggat 361 || || | ||||||||||||||||| ||||||||||||| ||||| ||||||||||||| Sbjct: 304 gatattattaaacataatggcaggcttatcagccatgctgtcaaaaaattggtcgaggat 363 Query: 362 tatgaatcaaacccaaagtcagtgctatttcagatattaacaatgttatttgaggcctgt 421 ||||||||| | ||||| || ||| | |||||||||||| | ||| |||||||||| ||| Sbjct: 364 tatgaatcagatccaaaatctgtgatgtttcagatattagcgatgctatttgaggcttgt 423 Query: 422 gg 423 || Sbjct: 424 gg 425 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Plus Query: 112 gcgccgcccgaagcgtggccgcccgccgcggccgagggag 151 ||||||||||||||| || || |||||||||||| ||||| Sbjct: 123 gcgccgcccgaagcgcgggcggccgccgcggccgcgggag 162
>dbj|AK069089.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008B14, full insert sequence Length = 3756 Score = 139 bits (70), Expect = 1e-29 Identities = 154/182 (84%) Strand = Plus / Plus Query: 242 aagcgcaagcgcgaggcgtccgccgctgccgccgccgcgctcgaggatttgaccctcatc 301 ||||||||||||| ||| |||||| ||||| |||||||| ||||| ||||||||| Sbjct: 190 aagcgcaagcgcgcggccagcgccgcggccgcggccgcgctggaggaccaaaccctcatc 249 Query: 302 gacatagtcaaacataatggcaggctaatcagccatgctgccaaaagattggtcgaggat 361 || || | ||||||||||||||||| ||||||||||||| ||||| ||||||||||||| Sbjct: 250 gatattattaaacataatggcaggcttatcagccatgctgtcaaaaaattggtcgaggat 309 Query: 362 tatgaatcaaacccaaagtcagtgctatttcagatattaacaatgttatttgaggcctgt 421 ||||||||| | ||||| || ||| | |||||||||||| | ||| |||||||||| ||| Sbjct: 310 tatgaatcagatccaaaatctgtgatgtttcagatattagcgatgctatttgaggcttgt 369 Query: 422 gg 423 || Sbjct: 370 gg 371 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Plus Query: 112 gcgccgcccgaagcgtggccgcccgccgcggccgagggag 151 ||||||||||||||| || || |||||||||||| ||||| Sbjct: 69 gcgccgcccgaagcgcgggcggccgccgcggccgcgggag 108
>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10, complete sequence Length = 153366 Score = 115 bits (58), Expect = 1e-22 Identities = 94/106 (88%) Strand = Plus / Plus Query: 311 aaacataatggcaggctaatcagccatgctgccaaaagattggtcgaggattatgaatca 370 ||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 56318 aaacataatggcaggcttatcagccatgctgtcaaaaaattggtcgaggattatgaatca 56377 Query: 371 aacccaaagtcagtgctatttcagatattaacaatgttatttgagg 416 | ||||| || ||| | |||||||||||| | ||| ||||||||| Sbjct: 56378 gatccaaaatctgtgatgtttcagatattagcgatgctatttgagg 56423 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 cgctgccgccgccgcgctcg 284 |||||||||||||||||||| Sbjct: 142230 cgctgccgccgccgcgctcg 142249
>gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_A10, complete sequence Length = 102275 Score = 115 bits (58), Expect = 1e-22 Identities = 94/106 (88%) Strand = Plus / Plus Query: 311 aaacataatggcaggctaatcagccatgctgccaaaagattggtcgaggattatgaatca 370 ||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 55158 aaacataatggcaggcttatcagccatgctgtcaaaaaattggtcgaggattatgaatca 55217 Query: 371 aacccaaagtcagtgctatttcagatattaacaatgttatttgagg 416 | ||||| || ||| | |||||||||||| | ||| ||||||||| Sbjct: 55218 gatccaaaatctgtgatgtttcagatattagcgatgctatttgagg 55263
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 115 bits (58), Expect = 1e-22 Identities = 94/106 (88%) Strand = Plus / Plus Query: 311 aaacataatggcaggctaatcagccatgctgccaaaagattggtcgaggattatgaatca 370 ||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 5369644 aaacataatggcaggcttatcagccatgctgtcaaaaaattggtcgaggattatgaatca 5369703 Query: 371 aacccaaagtcagtgctatttcagatattaacaatgttatttgagg 416 | ||||| || ||| | |||||||||||| | ||| ||||||||| Sbjct: 5369704 gatccaaaatctgtgatgtttcagatattagcgatgctatttgagg 5369749 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 252 gcgaggcgtccgccgctgccgccgcc 277 |||||||| ||||||||||||||||| Sbjct: 26996608 gcgaggcgaccgccgctgccgccgcc 26996583 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 27770151 tccgccgctgccgccgccgc 27770170 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ggcgtccgccgctgccgccgccgc 279 |||||||||||| ||||||||||| Sbjct: 7850874 ggcgtccgccgccgccgccgccgc 7850897 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 cgctgccgccgccgcgctcg 284 |||||||||||||||||||| Sbjct: 5455556 cgctgccgccgccgcgctcg 5455575
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgctcga 285 ||||||||||||||||||||||||| Sbjct: 306124 ccgccgctgccgccgccgcgctcga 306148
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 266 gctgccgccgccgcgctcgaggat 289 |||||||||||||||||||||||| Sbjct: 474653 gctgccgccgccgcgctcgaggat 474630
>emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome; segment 2/13 Length = 342416 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 266 gctgccgccgccgcgctcgaggat 289 |||||||||||||||||||||||| Sbjct: 132655 gctgccgccgccgcgctcgaggat 132632
>emb|BX248335.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 2/14 Length = 324050 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 266 gctgccgccgccgcgctcgaggat 289 |||||||||||||||||||||||| Sbjct: 132581 gctgccgccgccgcgctcgaggat 132558
>gb|AF000198.2| Caenorhabditis elegans cosmid T28F2, complete sequence Length = 34397 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 170 gaagagtttgaggacgaggagga 192 ||||||||||||||||||||||| Sbjct: 7299 gaagagtttgaggacgaggagga 7277
>gb|AC166710.7| Mus musculus chromosome 1, clone RP24-252K15, complete sequence Length = 156244 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 179 gaggacgaggaggagggggagga 201 ||||||||||||||||||||||| Sbjct: 86641 gaggacgaggaggagggggagga 86663
>ref|NM_001011665.1| Rattus norvegicus tripartite motif protein 26 (Trim26), mRNA Length = 3164 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 179 gaggacgaggaggagggggagga 201 ||||||||||||||||||||||| Sbjct: 1342 gaggacgaggaggagggggagga 1364
>gb|AC090330.22| Homo sapiens chromosome 18, clone RP11-813B21, complete sequence Length = 160530 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 179 gaggacgaggaggagggggagga 201 ||||||||||||||||||||||| Sbjct: 53267 gaggacgaggaggagggggagga 53289
>emb|BX883051.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 10/11 Length = 348946 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 179 gaggacgaggaggagggggagga 201 ||||||||||||||||||||||| Sbjct: 237959 gaggacgaggaggagggggagga 237981
>gb|AC090465.15| Homo sapiens chromosome 18, clone RP11-527C6, complete sequence Length = 174535 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 179 gaggacgaggaggagggggagga 201 ||||||||||||||||||||||| Sbjct: 172036 gaggacgaggaggagggggagga 172058
>ref|NM_016626.2| Homo sapiens ring finger and KH domain containing 2 (RKHD2), mRNA Length = 3493 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 179 gaggacgaggaggagggggagga 201 ||||||||||||||||||||||| Sbjct: 20 gaggacgaggaggagggggagga 42
>ref|NM_001026473.2| Caenorhabditis elegans T28F2.4a (T28F2.4) mRNA, complete cds Length = 2444 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 170 gaagagtttgaggacgaggagga 192 ||||||||||||||||||||||| Sbjct: 687 gaagagtttgaggacgaggagga 709
>ref|XM_574717.1| PREDICTED: Rattus norvegicus tripartite motif protein 26 (Trim26), mRNA Length = 1631 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 179 gaggacgaggaggagggggagga 201 ||||||||||||||||||||||| Sbjct: 1152 gaggacgaggaggagggggagga 1174
>gb|AC119928.8| Mus musculus chromosome 1, clone RP24-259F2, complete sequence Length = 174419 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 179 gaggacgaggaggagggggagga 201 ||||||||||||||||||||||| Sbjct: 12750 gaggacgaggaggagggggagga 12728
>ref|NM_193450.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 804 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 259 gtccgccgctgccgccgccgcgctcg 284 ||||||||||||||| |||||||||| Sbjct: 145 gtccgccgctgccgcggccgcgctcg 120
>ref|XM_479146.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1816 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 257 gcgtccgccgctgccgccgccg 278 |||||||||||||||||||||| Sbjct: 1423 gcgtccgccgctgccgccgccg 1402
>ref|NM_026744.2| Mus musculus mitochondrial ribosomal protein L53 (Mrpl53), mRNA Length = 1866 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 gaggacgaggaggagggggagg 200 |||||||||||||||||||||| Sbjct: 339 gaggacgaggaggagggggagg 360
>gb|AC160400.12| Mus musculus 6 BAC RP23-321M22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 219634 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 gaggacgaggaggagggggagg 200 |||||||||||||||||||||| Sbjct: 34055 gaggacgaggaggagggggagg 34076
>gb|AC092076.7| Oryza sativa chromosome 3 BAC OSJNBb0021G19 genomic sequence, complete sequence Length = 141582 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 176 tttgaggacgaggaggagggggagga 201 ||||||||||||||||||| |||||| Sbjct: 77448 tttgaggacgaggaggaggaggagga 77473
>ref|NM_207334.1| Homo sapiens family with sequence similarity 43, member B (FAM43B), mRNA Length = 2569 Score = 44.1 bits (22), Expect = 0.43 Identities = 31/34 (91%) Strand = Plus / Plus Query: 179 gaggacgaggaggagggggaggaccacgcagagg 212 |||||||||||||||| ||||||| |||| |||| Sbjct: 1331 gaggacgaggaggaggaggaggacgacgcggagg 1364
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 176 tttgaggacgaggaggagggggagga 201 ||||||||||||||||||| |||||| Sbjct: 32802093 tttgaggacgaggaggaggaggagga 32802068 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ggcgtccgccgctgccgccgccgc 279 |||||||||||| ||||||||||| Sbjct: 28859646 ggcgtccgccgccgccgccgccgc 28859669 Score = 40.1 bits (20), Expect = 6.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 252 gcgaggcgtccgccgctgccgccgccgc 279 |||||||| ||||||||||||||||||| Sbjct: 25612370 gcgaggcg-ccgccgctgccgccgccgc 25612344 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 ggcgtccgccgctgccgccgccgc 279 |||||||||||| ||||||||||| Sbjct: 12699157 ggcgtccgccgccgccgccgccgc 12699134 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 9424415 tccgccgctgccgccgccgc 9424434 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgctcg 284 ||||||| |||||||||||||||| Sbjct: 2888913 ccgccgccgccgccgccgcgctcg 2888936
>ref|XM_977965.1| PREDICTED: Mus musculus RIKEN cDNA A230058J24 gene, transcript variant 2 (A230058J24Rik), mRNA Length = 3129 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 gaggacgaggaggagggggagg 200 |||||||||||||||||||||| Sbjct: 2231 gaggacgaggaggagggggagg 2252
>ref|XM_620337.3| PREDICTED: Mus musculus RIKEN cDNA A230058J24 gene, transcript variant 1 (A230058J24Rik), mRNA Length = 3129 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 gaggacgaggaggagggggagg 200 |||||||||||||||||||||| Sbjct: 2231 gaggacgaggaggagggggagg 2252
>ref|XM_912719.2| PREDICTED: Mus musculus RIKEN cDNA A230058J24 gene, transcript variant 3 (A230058J24Rik), mRNA Length = 3129 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 gaggacgaggaggagggggagg 200 |||||||||||||||||||||| Sbjct: 2231 gaggacgaggaggagggggagg 2252
>gb|BC056930.1| Mus musculus cDNA clone IMAGE:6817390, **** WARNING: chimeric clone **** Length = 3647 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 gaggacgaggaggagggggagg 200 |||||||||||||||||||||| Sbjct: 2117 gaggacgaggaggagggggagg 2138
>emb|AL391357.20| Human DNA sequence from clone RP11-401M16 on chromosome 1 Contains the gene for calcium/calmodulin-dependent protein kinase II (CaMKIINalpha), the gene for a novel protein (FLJ12875), a ribosomal protein S4 X-linked (RPS4X) pseudogene, the CDA gene for cytidine deaminase, the PINK1 gene for PTEN induced putative kinase 1, a novel gene (FLJ00387), the DDOST gene for dolichyl-diphosphooligosaccharide-protein glycosyltransferase and the 3' end of the KIF17 gene for kinesin family member 17, complete sequence Length = 195076 Score = 44.1 bits (22), Expect = 0.43 Identities = 31/34 (91%) Strand = Plus / Plus Query: 179 gaggacgaggaggagggggaggaccacgcagagg 212 |||||||||||||||| ||||||| |||| |||| Sbjct: 75576 gaggacgaggaggaggaggaggacgacgcggagg 75609
>gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0494H05, complete sequence Length = 141715 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 252 gcgaggcgtccgccgctgccgccgcc 277 |||||||| ||||||||||||||||| Sbjct: 3190 gcgaggcgaccgccgctgccgccgcc 3165
>gb|BC065995.1| Mus musculus mitochondrial ribosomal protein L53, mRNA (cDNA clone MGC:90068 IMAGE:5688315), complete cds Length = 1866 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 gaggacgaggaggagggggagg 200 |||||||||||||||||||||| Sbjct: 339 gaggacgaggaggagggggagg 360
>gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0554F08, complete sequence Length = 166218 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 252 gcgaggcgtccgccgctgccgccgcc 277 |||||||| ||||||||||||||||| Sbjct: 29031 gcgaggcgaccgccgctgccgccgcc 29006
>dbj|AK126900.1| Homo sapiens cDNA FLJ44952 fis, clone BRAWH2004078 Length = 2569 Score = 44.1 bits (22), Expect = 0.43 Identities = 31/34 (91%) Strand = Plus / Plus Query: 179 gaggacgaggaggagggggaggaccacgcagagg 212 |||||||||||||||| ||||||| |||| |||| Sbjct: 1331 gaggacgaggaggaggaggaggacgacgcggagg 1364
>dbj|AK052892.1| Mus musculus 16 days neonate heart cDNA, RIKEN full-length enriched library, clone:D830027O05 product:inferred: similar to GP|14272758 {Homo sapiens}, full insert sequence Length = 1290 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 gaggacgaggaggagggggagg 200 |||||||||||||||||||||| Sbjct: 803 gaggacgaggaggagggggagg 782
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 258 cgtccgccgctgccgccgccgcgctc 283 ||||||||||||||||||||| |||| Sbjct: 4693268 cgtccgccgctgccgccgccgggctc 4693243 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 21441588 ccgccgctgccgccgccgcgc 21441608 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgctcg 284 ||||||| |||||||||||||||| Sbjct: 21495201 ccgccgccgccgccgccgcgctcg 21495224 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcgctcg 284 ||||||| |||||||||||||||| Sbjct: 20580077 ccgccgccgccgccgccgcgctcg 20580054 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcgctcg 284 ||||||| |||||||||||||||| Sbjct: 17607500 ccgccgccgccgccgccgcgctcg 17607477
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 180 aggacgaggaggagggggagga 201 |||||||||||||||||||||| Sbjct: 25256140 aggacgaggaggagggggagga 25256161 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 257 gcgtccgccgctgccgccgccg 278 |||||||||||||||||||||| Sbjct: 25205988 gcgtccgccgctgccgccgccg 25205967 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 29234656 tccgccgctgccgccgccgc 29234675 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 cgccgctgccgccgccgcgc 281 |||||||||||||||||||| Sbjct: 28246995 cgccgctgccgccgccgcgc 28246976 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcgctcg 284 ||||||| |||||||||||||||| Sbjct: 14479793 ccgccgccgccgccgccgcgctcg 14479770 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 10704538 tccgccgctgccgccgccgc 10704519
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 176 tttgaggacgaggaggagggggagga 201 ||||||||||||||||||| |||||| Sbjct: 32892603 tttgaggacgaggaggaggaggagga 32892578 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ggcgtccgccgctgccgccgccgc 279 |||||||||||| ||||||||||| Sbjct: 28951068 ggcgtccgccgccgccgccgccgc 28951091 Score = 40.1 bits (20), Expect = 6.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 252 gcgaggcgtccgccgctgccgccgccgc 279 |||||||| ||||||||||||||||||| Sbjct: 25703679 gcgaggcg-ccgccgctgccgccgccgc 25703653 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 ggcgtccgccgctgccgccgccgc 279 |||||||||||| ||||||||||| Sbjct: 12695920 ggcgtccgccgccgccgccgccgc 12695897 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 9422536 tccgccgctgccgccgccgc 9422555 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgctcg 284 ||||||| |||||||||||||||| Sbjct: 2889024 ccgccgccgccgccgccgcgctcg 2889047
>ref|XM_395815.2| PREDICTED: Apis mellifera similar to ENSANGP00000009998 (LOC412354), mRNA Length = 4506 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 gaggacgaggaggagggggagg 200 |||||||||||||||||||||| Sbjct: 850 gaggacgaggaggagggggagg 871
>dbj|AP006446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1097H10 Length = 159732 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 258 cgtccgccgctgccgccgccgcgctc 283 ||||||||||||||||||||| |||| Sbjct: 10872 cgtccgccgctgccgccgccgggctc 10847
>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0616D06 Length = 153800 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 180 aggacgaggaggagggggagga 201 |||||||||||||||||||||| Sbjct: 72811 aggacgaggaggagggggagga 72832 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 257 gcgtccgccgctgccgccgccg 278 |||||||||||||||||||||| Sbjct: 22659 gcgtccgccgctgccgccgccg 22638
>dbj|AK119291.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-D07, full insert sequence Length = 1266 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 252 gcgaggcgtccgccgctgccgccgcc 277 |||||||| ||||||||||||||||| Sbjct: 83 gcgaggcgaccgccgctgccgccgcc 108
>dbj|AK071281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086E05, full insert sequence Length = 1817 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 257 gcgtccgccgctgccgccgccg 278 |||||||||||||||||||||| Sbjct: 1424 gcgtccgccgctgccgccgccg 1403
>dbj|AK068660.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162K14, full insert sequence Length = 1994 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 176 tttgaggacgaggaggagggggagga 201 ||||||||||||||||||| |||||| Sbjct: 176 tttgaggacgaggaggaggaggagga 151
>gb|AC104324.21| Mus musculus strain C57BL/6J chromosome 6 clone rp23-177j21, complete sequence Length = 193277 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 gaggacgaggaggagggggagg 200 |||||||||||||||||||||| Sbjct: 144764 gaggacgaggaggagggggagg 144785
>emb|AL928812.11| Mouse DNA sequence from clone RP23-321B23 on chromosome 2, complete sequence Length = 199019 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 gaggacgaggaggagggggagg 200 |||||||||||||||||||||| Sbjct: 66240 gaggacgaggaggagggggagg 66219
>gb|J04123.1|HAMNF1B Hamster nuclear factor 1-like protein (NF1) mRNA, complete cds, clone pNF1/X Length = 1816 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 256 ggcgtccgccgctgccgccgccgcgc 281 |||||||||||| ||||||||||||| Sbjct: 117 ggcgtccgccgccgccgccgccgcgc 92
>ref|XM_510512.1| PREDICTED: Pan troglodytes similar to acheron isoform 1; death-associated LA motif protein (LOC453549), mRNA Length = 1577 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 173 gagtttgaggacgaggaggaggggg 197 ||||| ||||||||||||||||||| Sbjct: 150 gagttggaggacgaggaggaggggg 174
>ref|XM_466540.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1086 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 679 ccgccgctgccgccgccgcgc 699
>gb|AE017352.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 12, complete sequence Length = 906719 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 accggcgaagagtttgaggac 184 ||||||||||||||||||||| Sbjct: 391537 accggcgaagagtttgaggac 391517
>gb|AF067777.1| Homo sapiens map 2p11.2; 83cM from GATA85A06 repeat region, complete sequence Length = 201 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 92 ccgccgctgccgccgccgcgc 72
>gb|AF411339.1| Homo sapiens brain-derived neurotrophic factor opposite strand (BDNFOS) gene, partial sequence; and brain-derived neurotrophic factor (BDNF) gene, complete cds Length = 115886 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 53374 ccgccgctgccgccgccgcgc 53394
>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence Length = 1608198 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 178 tgaggacgaggaggagggggaggac 202 ||||||||||||||||| ||||||| Sbjct: 1001375 tgaggacgaggaggaggaggaggac 1001351
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 153 gcgacttcgtgaccggcgaagagtt 177 |||||||||||||| |||||||||| Sbjct: 173558 gcgacttcgtgacccgcgaagagtt 173582
>gb|AC113585.4| Trypanosoma brucei chromosome 5 clone RPCI93-27M3, complete sequence Length = 127380 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 178 tgaggacgaggaggagggggaggac 202 ||||||||||||||||| ||||||| Sbjct: 43376 tgaggacgaggaggaggaggaggac 43352
>gb|AC163748.6| Mus musculus BAC clone RP23-411N10 from chromosome 9, complete sequence Length = 226254 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 167954 ccgccgctgccgccgccgcgc 167934
>gb|AY706205.1| Mus musculus Brn3a (Pou4f1) mRNA, complete cds Length = 2616 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 972 ccgccgctgccgccgccgcgc 952
>gb|AC137124.17| Mus musculus chromosome 3, clone RP24-229P11, complete sequence Length = 172081 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 96813 ccgccgctgccgccgccgcgc 96793
>ref|NM_011143.3| Mus musculus POU domain, class 4, transcription factor 1 (Pou4f1), mRNA Length = 3801 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 972 ccgccgctgccgccgccgcgc 952
>gb|BC051856.1| Homo sapiens hypothetical protein FLJ12505, mRNA (cDNA clone MGC:60211 IMAGE:6067012), complete cds Length = 3580 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 255 ccgccgctgccgccgccgcgc 275
>gb|AY217089.1| Mus musculus neuronal transcription factor BRN3a (Pou4f1) gene, complete cds; alternatively spliced Length = 11036 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 8007 ccgccgctgccgccgccgcgc 7987
>ref|XM_714221.1| Candida albicans SC5314 hypothetical protein (CaO19_7552), mRNA Length = 2619 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 182 gacgaggaggagggggaggac 202 ||||||||||||||||||||| Sbjct: 475 gacgaggaggagggggaggac 495
>ref|NM_133218.1| Mus musculus glucocorticoid induced gene 1 (Gig1), mRNA Length = 13889 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 508 ccgccgctgccgccgccgcgc 528
>ref|NM_197958.1| Homo sapiens La ribonucleoprotein domain family, member 6 (LARP6), transcript variant 2, mRNA Length = 577 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 173 gagtttgaggacgaggaggaggggg 197 ||||| ||||||||||||||||||| Sbjct: 159 gagttggaggacgaggaggaggggg 183
>ref|NM_018357.2| Homo sapiens La ribonucleoprotein domain family, member 6 (LARP6), transcript variant 1, mRNA Length = 2065 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 173 gagtttgaggacgaggaggaggggg 197 ||||| ||||||||||||||||||| Sbjct: 159 gagttggaggacgaggaggaggggg 183
>ref|XM_992153.1| PREDICTED: Mus musculus hypothetical protein LOC667747 (LOC667747), mRNA Length = 1053 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 627 ccgccgctgccgccgccgcgc 647
>ref|XM_130764.7| PREDICTED: Mus musculus TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor, transcript variant 1 (Taf4a), mRNA Length = 4422 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 812 ccgccgctgccgccgccgcgc 832
>ref|XM_820610.1| Trypanosoma brucei TREU927 clone RPCI93-27M3 hypothetical protein (Tb927.5.3230) partial mRNA Length = 6546 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 178 tgaggacgaggaggagggggaggac 202 ||||||||||||||||| ||||||| Sbjct: 6372 tgaggacgaggaggaggaggaggac 6396
>ref|XM_568247.1| Cryptococcus neoformans var. neoformans JEC21 diphosphomevalonate decarboxylase (CNL04950) partial mRNA Length = 1276 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 accggcgaagagtttgaggac 184 ||||||||||||||||||||| Sbjct: 997 accggcgaagagtttgaggac 1017
>gb|AC121997.3| Mus musculus BAC clone RP24-312G4 from chromosome 14, complete sequence Length = 143266 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 72137 ccgccgctgccgccgccgcgc 72157
>gb|BC053836.1| Homo sapiens hypothetical protein FLJ12505, mRNA (cDNA clone MGC:59727 IMAGE:5802700), complete cds Length = 3291 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 271 ccgccgctgccgccgccgcgc 291
>ref|XM_670668.1| Plasmodium berghei strain ANKA hypothetical protein (PB000697.00.0) partial mRNA Length = 795 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 attatgaatcaaacccaaagt 380 ||||||||||||||||||||| Sbjct: 196 attatgaatcaaacccaaagt 216
>emb|AL592449.8| Human DNA sequence from clone RP11-275G3 on chromosome 1 Contains two novel genes (FLJ12505 FLJ39286) (FLJ12793 FLJ36628) and a CpG island, complete sequence Length = 111783 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 20930 ccgccgctgccgccgccgcgc 20950
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 cgctgccgccgccgcgctcga 285 ||||||||||||||||||||| Sbjct: 2310525 cgctgccgccgccgcgctcga 2310545
>gb|AC021028.12| Homo sapiens chromosome 10 clone RP11-137H2, complete sequence Length = 161803 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 47358 ccgccgctgccgccgccgcgc 47378
>gb|AC103796.3| Homo sapiens chromosome 11, clone RP11-1033A18, complete sequence Length = 211799 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 3898 ccgccgctgccgccgccgcgc 3878
>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29 Length = 293050 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 gacgaggaggagggggaggac 202 ||||||||||||||||||||| Sbjct: 24422 gacgaggaggagggggaggac 24402
>emb|AJ000977.1|RSCHEMOOP Rhodobacter sphaeroides DNA for second chemotaxis operon and flanking genes Length = 10434 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 153 gcgacttcgtgaccggcgaagagtt 177 |||||||||||||| |||||||||| Sbjct: 842 gcgacttcgtgacccgcgaagagtt 866
>emb|AJ009972.1|ANI9972 Aspergillus niger pyc gene Length = 6513 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 179 gaggacgaggaggagggggaggacc 203 ||||| ||||||||||||||||||| Sbjct: 1543 gaggatgaggaggagggggaggacc 1519
>emb|AL663054.9| Mouse DNA sequence from clone RP23-480G5 on chromosome 11 Contains the 5' end of the Myo1d gene for myosin ID, a novel gene and a mitochondrial ribosomal protein L27 (Mrpl27) pseudogene, complete sequence Length = 82452 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 177 ttgaggacgaggaggagggggagga 201 ||||||| ||||||||||||||||| Sbjct: 51676 ttgaggaggaggaggagggggagga 51652
>gb|BC014018.2| Homo sapiens La ribonucleoprotein domain family, member 6, transcript variant 1, mRNA (cDNA clone MGC:20301 IMAGE:4127153), complete cds Length = 2022 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 173 gagtttgaggacgaggaggaggggg 197 ||||| ||||||||||||||||||| Sbjct: 116 gagttggaggacgaggaggaggggg 140
>gb|BC093016.1| Homo sapiens tetraspanin 14, mRNA (cDNA clone MGC:110883 IMAGE:30528940), complete cds Length = 1964 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 66 ccgccgctgccgccgccgcgc 86
>gb|AF533977.1| Mus musculus cAMP-dependent protein kinase type II-alpha regulatory chain mRNA, complete cds Length = 4051 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 84 ccgccgctgccgccgccgcgc 64
>gb|AF311903.1| Homo sapiens DC-TM4F2 precursor, mRNA, complete cds Length = 2553 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 31 ccgccgctgccgccgccgcgc 51
>gb|BC075623.1| Mus musculus protein kinase, cAMP dependent regulatory, type II alpha, mRNA (cDNA clone MGC:99981 IMAGE:6854057), complete cds Length = 4011 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 54 ccgccgctgccgccgccgcgc 34
>emb|AL833876.1|HSM805170 Homo sapiens mRNA; cDNA DKFZp762N186 (from clone DKFZp762N186) Length = 2024 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 173 gagtttgaggacgaggaggaggggg 197 ||||| ||||||||||||||||||| Sbjct: 119 gagttggaggacgaggaggaggggg 143
>emb|AL136638.1|HSM801611 Homo sapiens mRNA; cDNA DKFZp564B1037 (from clone DKFZp564B1037) Length = 2556 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 37 ccgccgctgccgccgccgcgc 57
>ref|NM_024749.2| Homo sapiens hypothetical protein FLJ12505 (FLJ12505), mRNA Length = 3580 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 255 ccgccgctgccgccgccgcgc 275
>gb|AC150911.4| Pan troglodytes BAC clone CH251-489G13 from chromosome 7, complete sequence Length = 200337 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 173 gagtttgaggacgaggaggagggggagga 201 ||||||||||| |||||||||| |||||| Sbjct: 190180 gagtttgaggaagaggaggaggaggagga 190208
>dbj|AK090931.1| Homo sapiens cDNA FLJ33612 fis, clone BRAMY2016953, highly similar to Adipocyte transcription factor, AEBP1 Length = 2172 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 173 gagtttgaggacgaggaggagggggagga 201 ||||||||||| |||||||||| |||||| Sbjct: 1767 gagtttgaggaagaggaggaggaggagga 1795
>dbj|AK074558.1| Homo sapiens cDNA FLJ90077 fis, clone HEMBA1004454 Length = 1439 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 37 ccgccgctgccgccgccgcgc 57
>emb|CR592697.1| full-length cDNA clone CS0DF010YN23 of Fetal brain of Homo sapiens (human) Length = 2004 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 173 gagtttgaggacgaggaggaggggg 197 ||||| ||||||||||||||||||| Sbjct: 148 gagttggaggacgaggaggaggggg 172
>dbj|AK002058.1| Homo sapiens cDNA FLJ11196 fis, clone PLACE1007688, weakly similar to LA PROTEIN HOMOLOG Length = 2061 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 173 gagtttgaggacgaggaggaggggg 197 ||||| ||||||||||||||||||| Sbjct: 159 gagttggaggacgaggaggaggggg 183
>gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 genomic sequence, complete sequence Length = 152172 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 19679 ccgccgctgccgccgccgcgc 19699
>dbj|AK132728.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4922503H05 product:protein kinase, cAMP dependent regulatory, type II alpha, full insert sequence Length = 1647 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 23 ccgccgctgccgccgccgcgc 3
>gb|AC090051.8| Homo sapiens 12q BAC RP11-467E3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 148120 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 263 gccgctgccgccgccgcgctc 283 ||||||||||||||||||||| Sbjct: 36738 gccgctgccgccgccgcgctc 36718
>gb|AC090868.4| Homo sapiens chromosome 15, clone RP11-795G3, complete sequence Length = 183890 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 173 gagtttgaggacgaggaggaggggg 197 ||||| ||||||||||||||||||| Sbjct: 51935 gagttggaggacgaggaggaggggg 51959
>ref|NM_030927.1| Homo sapiens tetraspanin 14 (TSPAN14), mRNA Length = 2556 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 37 ccgccgctgccgccgccgcgc 57
>gb|BC009446.1| Homo sapiens La ribonucleoprotein domain family, member 6, transcript variant 1, mRNA (cDNA clone MGC:15884 IMAGE:3529516), complete cds Length = 2018 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 173 gagtttgaggacgaggaggaggggg 197 ||||| ||||||||||||||||||| Sbjct: 112 gagttggaggacgaggaggaggggg 136
>gb|BC006082.1| Homo sapiens La ribonucleoprotein domain family, member 6, transcript variant 1, mRNA (cDNA clone MGC:12583 IMAGE:2961587), complete cds Length = 2018 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 173 gagtttgaggacgaggaggaggggg 197 ||||| ||||||||||||||||||| Sbjct: 112 gagttggaggacgaggaggaggggg 136
>gb|BC039153.1| Homo sapiens La ribonucleoprotein domain family, member 6, transcript variant 2, mRNA (cDNA clone IMAGE:4344858), complete cds Length = 539 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 173 gagtttgaggacgaggaggaggggg 197 ||||| ||||||||||||||||||| Sbjct: 121 gagttggaggacgaggaggaggggg 145
>gb|S69350.1| Mus sp. class V POU transcription factor (Brn3a) gene, complete cds Length = 2160 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 1544 ccgccgctgccgccgccgcgc 1524
>gb|AC008610.7| Homo sapiens chromosome 5 clone CTB-129O4, complete sequence Length = 145242 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 260 tccgccgctgccgccgccgcg 280 ||||||||||||||||||||| Sbjct: 40539 tccgccgctgccgccgccgcg 40559
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 259 gtccgccgctgccgccgccgc 279 ||||||||||||||||||||| Sbjct: 13887056 gtccgccgctgccgccgccgc 13887036 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 gacgaggaggagggggagga 201 |||||||||||||||||||| Sbjct: 25287304 gacgaggaggagggggagga 25287285 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 14737285 tccgccgctgccgccgccgc 14737304 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcg 280 |||||||||||||||||||| Sbjct: 581378 ccgccgctgccgccgccgcg 581397
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 19356702 ccgccgctgccgccgccgcgc 19356682 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 ccgctgccgccgccgcgctc 283 |||||||||||||||||||| Sbjct: 17918208 ccgctgccgccgccgcgctc 17918189 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 14596293 tccgccgctgccgccgccgc 14596312 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcg 280 |||||||||||||||||||| Sbjct: 10139542 ccgccgctgccgccgccgcg 10139561
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 23192888 ccgccgctgccgccgccgcgc 23192908 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 31416504 tccgccgctgccgccgccgc 31416523 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 cgccgctgccgccgccgcgctcga 285 |||||| ||||||||||||||||| Sbjct: 29900693 cgccgcagccgccgccgcgctcga 29900670 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 29516999 tccgccgctgccgccgccgc 29516980 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcg 280 |||||||||||||||||||| Sbjct: 29458816 ccgccgctgccgccgccgcg 29458797 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcgctcg 284 ||||||| |||||||||||||||| Sbjct: 27772119 ccgccgccgccgccgccgcgctcg 27772096 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 gacgaggaggagggggagga 201 |||||||||||||||||||| Sbjct: 24670425 gacgaggaggagggggagga 24670444 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 ggcgtccgccgctgccgccgccgc 279 |||| ||||||||||||||||||| Sbjct: 6705211 ggcgaccgccgctgccgccgccgc 6705188 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcg 280 |||||||||||||||||||| Sbjct: 4423376 ccgccgctgccgccgccgcg 4423357
>gb|AC009499.4| Homo sapiens BAC clone RP11-510D10 from 2, complete sequence Length = 176570 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 400 aacaatgttatttgaggcctg 420 ||||||||||||||||||||| Sbjct: 130155 aacaatgttatttgaggcctg 130135
>gb|AF292939.1|AF292939 Mus musculus glucocorticoid-induced gene 1 mRNA, complete cds Length = 13889 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 508 ccgccgctgccgccgccgcgc 528
>gb|BC002920.2| Homo sapiens tetraspanin 14, mRNA (cDNA clone MGC:11352 IMAGE:3954042), complete cds Length = 2493 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 12 ccgccgctgccgccgccgcgc 32
>ref|XM_341372.2| PREDICTED: Rattus norvegicus POU domain, class 4, transcription factor 1 (Pou4f1), mRNA Length = 2589 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 974 ccgccgctgccgccgccgcgc 954
>ref|XM_226953.3| PREDICTED: Rattus norvegicus similar to glucocorticoid induced gene 1 (LOC310233), mRNA Length = 4656 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 211 ccgccgctgccgccgccgcgc 231
>gb|AC018730.8| Homo sapiens BAC clone RP11-13J10 from 2, complete sequence Length = 154728 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 82267 ccgccgctgccgccgccgcgc 82287
>gb|AF443829.1| Homo sapiens acheron mRNA, complete cds Length = 2057 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 173 gagtttgaggacgaggaggaggggg 197 ||||| ||||||||||||||||||| Sbjct: 158 gagttggaggacgaggaggaggggg 182
>gb|AF443828.1| Homo sapiens acheron mRNA, complete cds Length = 2057 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 173 gagtttgaggacgaggaggaggggg 197 ||||| ||||||||||||||||||| Sbjct: 158 gagttggaggacgaggaggaggggg 182
>dbj|AP005742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0489D11 Length = 150757 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 3198 ccgccgctgccgccgccgcgc 3218 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgctcg 284 ||||||| |||||||||||||||| Sbjct: 56811 ccgccgccgccgccgccgcgctcg 56834
>dbj|AP005679.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1210_A07 Length = 131394 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 58693 ccgccgctgccgccgccgcgc 58713 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgctcg 284 ||||||| |||||||||||||||| Sbjct: 112306 ccgccgccgccgccgccgcgctcg 112329
>dbj|AP004092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1568_B05 Length = 115325 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 50119 ccgccgctgccgccgccgcgc 50139
>emb|Z73141.1|TPPSAZURN T.pantotropha mRNA for pseudoazurin Length = 1084 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 262 cgccgctgccgccgccgcgct 282 ||||||||||||||||||||| Sbjct: 373 cgccgctgccgccgccgcgct 393
>emb|Z70033.1|TPPAZ T.pantotropha pseudoazurin gene Length = 1084 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 262 cgccgctgccgccgccgcgct 282 ||||||||||||||||||||| Sbjct: 373 cgccgctgccgccgccgcgct 393
>dbj|AK068007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130G06, full insert sequence Length = 1477 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 178 tgaggacgaggaggagggggaggac 202 |||||| |||||||||||||||||| Sbjct: 269 tgaggaggaggaggagggggaggac 293
>gb|BC080276.1| Mus musculus protein kinase, cAMP dependent regulatory, type II alpha, mRNA (cDNA clone MGC:90594 IMAGE:30354403), complete cds Length = 4047 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 78 ccgccgctgccgccgccgcgc 58
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 19367978 ccgccgctgccgccgccgcgc 19367958 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 ccgctgccgccgccgcgctc 283 |||||||||||||||||||| Sbjct: 17927461 ccgctgccgccgccgcgctc 17927442 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 14604534 tccgccgctgccgccgccgc 14604553 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcg 280 |||||||||||||||||||| Sbjct: 10145581 ccgccgctgccgccgccgcg 10145600
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 259 gtccgccgctgccgccgccgc 279 ||||||||||||||||||||| Sbjct: 13841336 gtccgccgctgccgccgccgc 13841316 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 gacgaggaggagggggagga 201 |||||||||||||||||||| Sbjct: 25215480 gacgaggaggagggggagga 25215461 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 14691570 tccgccgctgccgccgccgc 14691589 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcg 280 |||||||||||||||||||| Sbjct: 581378 ccgccgctgccgccgccgcg 581397
>emb|AL928747.3|CNS08CBK Oryza sativa chromosome 12, . BAC OSJNBa0017A21 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144552 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 259 gtccgccgctgccgccgccgc 279 ||||||||||||||||||||| Sbjct: 23684 gtccgccgctgccgccgccgc 23664
>gb|AC146596.4| Mus musculus BAC clone RP24-175L7 from 13, complete sequence Length = 163780 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 35068 ccgccgctgccgccgccgcgc 35088
>ref|NM_008924.1| Mus musculus protein kinase, cAMP dependent regulatory, type II alpha (Prkar2a), mRNA Length = 4051 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 84 ccgccgctgccgccgccgcgc 64
>gb|AC133097.3| Mus musculus BAC clone RP23-287O2 from 1, complete sequence Length = 199276 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 83686 ccgccgctgccgccgccgcgc 83666
>gb|AC173341.1| Mus musculus BAC clone RP24-332P6 from chromosome 9, complete sequence Length = 149387 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 56840 ccgccgctgccgccgccgcgc 56820
>dbj|AB209744.1| Homo sapiens mRNA for adipocyte enhancer binding protein 1 precursor variant protein Length = 4038 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 173 gagtttgaggacgaggaggagggggagga 201 ||||||||||| |||||||||| |||||| Sbjct: 3629 gagtttgaggaagaggaggaggaggagga 3657
>emb|AL663067.14| Mouse DNA sequence from clone RP23-23G3 on chromosome 2, complete sequence Length = 193057 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 96709 ccgccgctgccgccgccgcgc 96689
>emb|X60202.1|HSNTFG Human DNA for the 5'flanking region of the brain-derived neurotrophic factor Length = 3252 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 2397 ccgccgctgccgccgccgcgc 2417
>dbj|AB001835.1| Homo sapiens DNA for Brain-1, complete cds Length = 1679 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgc 281 ||||||||||||||||||||| Sbjct: 1659 ccgccgctgccgccgccgcgc 1679
>gb|AC107710.5| Mus musculus chromosome 19, clone RP23-269K10, complete sequence Length = 188708 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 99622 tccgccgctgccgccgccgc 99603
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome Length = 4607203 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 gccgctgccgccgccgcgct 282 |||||||||||||||||||| Sbjct: 4559427 gccgctgccgccgccgcgct 4559446
>gb|BC108290.1| Homo sapiens loricrin, mRNA (cDNA clone MGC:111513 IMAGE:4754528), complete cds Length = 1293 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 777 tccgccgctgccgccgccgc 758
>ref|NM_115282.3| Arabidopsis thaliana SCR (SCARECROW); transcription factor AT3G54220 (SCR) mRNA, complete cds Length = 2509 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 179 gaggacgaggaggagggggaggaccacg 206 ||||| |||||||||| ||||||||||| Sbjct: 510 gaggaggaggaggaggaggaggaccacg 483
>gb|AY398362.1| Danio rerio clone RK133A2H12 HRIHFB2206 protein mRNA, complete cds Length = 1604 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 gaggacgaggaggaggggga 198 |||||||||||||||||||| Sbjct: 670 gaggacgaggaggaggggga 689
>gb|AY665467.1| Homo sapiens clone D11-G10 basic helix-loop-helix protein 3 isoform 1 (BHLHB3) mRNA, complete cds, alternatively spliced Length = 3220 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcg 280 |||||||||||||||||||| Sbjct: 973 ccgccgctgccgccgccgcg 954
>gb|AY665466.1| Homo sapiens clone A10-B11 basic helix-loop-helix protein 3 isoform 2 (BHLHB3) mRNA, complete cds, alternatively spliced Length = 3098 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcg 280 |||||||||||||||||||| Sbjct: 697 ccgccgctgccgccgccgcg 678
>ref|XM_520805.1| PREDICTED: Pan troglodytes similar to basic helix-loop-helix domain containing, class B, 3; differentially expressed in chondrocytes 2; bHLH protein DEC2 (LOC465351), mRNA Length = 1374 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcg 280 |||||||||||||||||||| Sbjct: 938 ccgccgctgccgccgccgcg 919
>ref|XM_515227.1| PREDICTED: Pan troglodytes LOC458945 (LOC458945), mRNA Length = 2505 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 tgaggacgaggaggagggggagga 201 ||||||||||||||||| |||||| Sbjct: 297 tgaggacgaggaggaggaggagga 320
>ref|XM_510940.1| PREDICTED: Pan troglodytes similar to KIAA0339 protein (LOC454058), mRNA Length = 2763 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 tgaggacgaggaggagggggagga 201 ||||||||||||||||| |||||| Sbjct: 741 tgaggacgaggaggaggaggagga 718
>gb|AC153148.4| Mus musculus BAC clone RP23-189N11 from chromosome 5, complete sequence Length = 229020 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 gaggacgaggaggagggggaggac 202 |||||||||||||||| ||||||| Sbjct: 200315 gaggacgaggaggaggaggaggac 200292
>ref|XM_474348.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1494 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcg 280 |||||||||||||||||||| Sbjct: 316 ccgccgctgccgccgccgcg 335
>ref|XM_474265.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1002 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 54 tccgccgctgccgccgccgc 73
>ref|XM_469127.1| Oryza sativa (japonica cultivar-group), mRNA Length = 321 Score = 40.1 bits (20), Expect = 6.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 252 gcgaggcgtccgccgctgccgccgccgc 279 |||||||| ||||||||||||||||||| Sbjct: 46 gcgaggcg-ccgccgctgccgccgccgc 20
>ref|XM_467784.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2230 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 1241 tccgccgctgccgccgccgc 1260
>ref|XM_467510.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1215 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 cgccgctgccgccgccgcgctcga 285 |||||| ||||||||||||||||| Sbjct: 135 cgccgcagccgccgccgcgctcga 112
>ref|XM_467438.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1002 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 407 tccgccgctgccgccgccgc 426
>ref|XM_467427.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1056 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcg 280 |||||||||||||||||||| Sbjct: 721 ccgccgctgccgccgccgcg 702
>ref|XM_464687.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1249 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ggcgtccgccgctgccgccgccgc 279 |||| ||||||||||||||||||| Sbjct: 985 ggcgaccgccgctgccgccgccgc 1008
>ref|NM_001031567.1| Gallus gallus LIM domain containing preferred translocation partner in lipoma (LPP), mRNA Length = 2991 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgctcg 284 ||||||| |||||||||||||||| Sbjct: 13 ccgccgccgccgccgccgcgctcg 36
>ref|XM_450927.1| Oryza sativa (japonica cultivar-group), mRNA Length = 747 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcgctcg 284 ||||||| |||||||||||||||| Sbjct: 77 ccgccgccgccgccgccgcgctcg 100
>ref|NM_197091.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0029C15.1), mRNA Length = 562 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 ccgctgccgccgccgcgctc 283 |||||||||||||||||||| Sbjct: 343 ccgctgccgccgccgcgctc 324
>ref|NM_196575.1| Oryza sativa (japonica cultivar-group) putative RIM2 protein (OSJNBa0072A12.15), mRNA Length = 4317 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 37 tccgccgctgccgccgccgc 56
>ref|NM_195943.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0023M11.12), mRNA Length = 972 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcg 280 |||||||||||||||||||| Sbjct: 179 ccgccgctgccgccgccgcg 160
>ref|NM_189787.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1023 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 975 tccgccgctgccgccgccgc 956 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcg 280 |||||||||||||||||||| Sbjct: 83 ccgccgctgccgccgccgcg 102
>ref|NM_190054.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 333 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcg 280 |||||||||||||||||||| Sbjct: 137 ccgccgctgccgccgccgcg 156
>ref|NM_003969.2| Homo sapiens ubiquitin-conjugating enzyme E2M (UBC12 homolog, yeast) (UBE2M), mRNA Length = 1536 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcg 280 |||||||||||||||||||| Sbjct: 574 ccgccgctgccgccgccgcg 555
>ref|NM_186117.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1525 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 cgccgctgccgccgccgcgc 281 |||||||||||||||||||| Sbjct: 517 cgccgctgccgccgccgcgc 536
>ref|XM_479152.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1629 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 gacgaggaggagggggagga 201 |||||||||||||||||||| Sbjct: 417 gacgaggaggagggggagga 436
>ref|XM_515434.1| PREDICTED: Pan troglodytes LOC459183 (LOC459183), mRNA Length = 5976 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 cgctgccgccgccgcgctcg 284 |||||||||||||||||||| Sbjct: 5487 cgctgccgccgccgcgctcg 5468
>ref|XM_477470.1| Oryza sativa (japonica cultivar-group), mRNA Length = 528 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 484 tccgccgctgccgccgccgc 503
>gb|BC067670.1| Danio rerio purine-rich element binding protein B, mRNA (cDNA clone IMAGE:6966440), partial cds Length = 1824 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcgctcg 284 |||||||||| ||||||||||||| Sbjct: 46 ccgccgctgctgccgccgcgctcg 23
>gb|AC102794.8| Mus musculus chromosome 3, clone RP23-235G13, complete sequence Length = 166028 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 101562 tccgccgctgccgccgccgc 101581
>gb|U93872.2| Kaposi's sarcoma-associated herpesvirus glycoprotein M, DNA replication protein, glycoprotein, DNA replication protein, FLICE inhibitory protein and v-cyclin genes, complete cds, and tegument protein gene, partial cds Length = 133661 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 gaggacgaggaggagggggaggac 202 |||||||||||||||| ||||||| Sbjct: 126420 gaggacgaggaggaggaggaggac 126397
>gb|BC034690.1| Homo sapiens loricrin, mRNA (cDNA clone MGC:21357 IMAGE:4752776), complete cds Length = 1280 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 756 tccgccgctgccgccgccgc 737
>gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0031O09, complete sequence Length = 161339 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ggcgtccgccgctgccgccgccgc 279 |||||||||||| ||||||||||| Sbjct: 124958 ggcgtccgccgccgccgccgccgc 124981
>gb|AY023330.1| Oryza sativa microsatellite MRG5655 containing (GTG)X9, genomic sequence Length = 227 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 cgccgctgccgccgccgcgc 281 |||||||||||||||||||| Sbjct: 206 cgccgctgccgccgccgcgc 187
>gb|AY023203.1| Oryza sativa microsatellite MRG5528 containing (GCG)X9, genomic sequence Length = 227 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcgctcg 284 ||||||| |||||||||||||||| Sbjct: 119 ccgccgccgccgccgccgcgctcg 96
>gb|AY022680.1| Oryza sativa microsatellite MRG5005 containing (CCG)X8, closest to marker R896, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ggcgtccgccgctgccgccgccgc 279 |||||||||||| ||||||||||| Sbjct: 96 ggcgtccgccgccgccgccgccgc 119
>gb|AC145321.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0094P07, complete sequence Length = 162311 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 72490 tccgccgctgccgccgccgc 72471
>gb|AC101948.10| Mus musculus chromosome 15, clone RP24-139K14, complete sequence Length = 182534 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 gaggacgaggaggagggggaggac 202 |||||||||||||| ||||||||| Sbjct: 145279 gaggacgaggaggatggggaggac 145256
>gb|AC119252.10| Mus musculus chromosome 8, clone RP24-279M13, complete sequence Length = 176594 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 gaggacgaggaggagggggaggac 202 ||||| |||||||||||||||||| Sbjct: 38524 gaggaggaggaggagggggaggac 38547
>gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B06, complete sequence Length = 139139 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 134709 tccgccgctgccgccgccgc 134728
>gb|AC102595.9| Mus musculus chromosome 10, clone RP23-360M11, complete sequence Length = 223843 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 tgaggacgaggaggagggggagga 201 |||||| ||||||||||||||||| Sbjct: 78981 tgaggaagaggaggagggggagga 79004
>gb|BC080624.1| Homo sapiens cDNA clone MGC:99790 IMAGE:6304510, complete cds Length = 1484 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 ccgctgccgccgccgcgctc 283 |||||||||||||||||||| Sbjct: 436 ccgctgccgccgccgcgctc 417
>gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1402B06, complete sequence Length = 134001 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ggcgtccgccgctgccgccgccgc 279 |||||||||||| ||||||||||| Sbjct: 128460 ggcgtccgccgccgccgccgccgc 128483
>ref|XM_367319.1| Magnaporthe grisea 70-15 hypothetical protein (MG07244.4) partial mRNA Length = 1317 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 196 ggaggaccacgcagaggcggccga 219 ||||||| |||||||||||||||| Sbjct: 360 ggaggacgacgcagaggcggccga 337
>ref|XM_873460.1| PREDICTED: Bos taurus hypothetical protein LOC613581 (LOC613581), mRNA Length = 990 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcg 280 |||||||||||||||||||| Sbjct: 617 ccgccgctgccgccgccgcg 636
>gb|AC147426.2| Oryza sativa chromosome 3 B1377B10 genomic sequence, complete sequence Length = 184366 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ggcgtccgccgctgccgccgccgc 279 |||||||||||| ||||||||||| Sbjct: 42941 ggcgtccgccgccgccgccgccgc 42964
>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02, complete sequence Length = 157106 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 568 tccgccgctgccgccgccgc 587
>gb|BC052011.1| Mus musculus forkhead box C1, mRNA (cDNA clone MGC:62340 IMAGE:5720391), complete cds Length = 2785 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcgctcg 284 ||||||| |||||||||||||||| Sbjct: 1880 ccgccgcagccgccgccgcgctcg 1857
>ref|XM_870651.1| PREDICTED: Bos taurus similar to PR domain containing 12 (LOC618320), mRNA Length = 1362 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 cgccgctgccgccgccgcgc 281 |||||||||||||||||||| Sbjct: 1317 cgccgctgccgccgccgcgc 1336
>gb|BC058924.1| Homo sapiens ubiquitin-conjugating enzyme E2M (UBC12 homolog, yeast), mRNA (cDNA clone MGC:65116 IMAGE:6162220), complete cds Length = 1053 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcg 280 |||||||||||||||||||| Sbjct: 96 ccgccgctgccgccgccgcg 77
>gb|BC056572.1| Danio rerio zgc:65871, mRNA (cDNA clone MGC:65871 IMAGE:6800403), complete cds Length = 1420 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 gaggacgaggaggaggggga 198 |||||||||||||||||||| Sbjct: 441 gaggacgaggaggaggggga 460
>gb|BC051858.2| Homo sapiens adiponectin receptor 2, mRNA (cDNA clone MGC:60215 IMAGE:6527208), complete cds Length = 1573 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcg 280 |||||||||||||||||||| Sbjct: 20 ccgccgctgccgccgccgcg 1
>ref|XM_322199.1| Neurospora crassa OR74A hypothetical protein (NCU00114.1) partial mRNA Length = 774 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcg 280 |||||||||||||||||||| Sbjct: 179 ccgccgctgccgccgccgcg 198
>gb|AC148934.2| Pan troglodytes BAC clone CH251-557M20 from Y, complete sequence Length = 169254 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 tgaggacgaggaggagggggagga 201 |||||| ||||||||||||||||| Sbjct: 152420 tgaggaggaggaggagggggagga 152443
>ref|XM_952145.1| Neurospora crassa OR74A hypothetical protein (NCU00114.1) partial mRNA Length = 774 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcg 280 |||||||||||||||||||| Sbjct: 179 ccgccgctgccgccgccgcg 198
>gb|BC000724.2| Homo sapiens ATPase, H+ transporting, lysosomal accessory protein 1, mRNA (cDNA clone MGC:1570 IMAGE:3506925), complete cds Length = 2078 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 143 tccgccgctgccgccgccgc 124
>gb|BC006990.1| Homo sapiens protein phosphatase 6, catalytic subunit, mRNA (cDNA clone MGC:12249 IMAGE:3684339), complete cds Length = 1563 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 2 tccgccgctgccgccgccgc 21
>gb|AC139211.13| Mus musculus chromosome 6, clone RP23-302O24, complete sequence Length = 154129 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 gaggacgaggaggagggggaggac 202 ||||| |||||||||||||||||| Sbjct: 32750 gaggaggaggaggagggggaggac 32727
>ref|XM_881850.1| PREDICTED: Bos taurus similar to Ran GTPase-activating protein 1, transcript variant 3 (LOC616055), mRNA Length = 2855 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 tgaggacgaggaggagggggagga 201 ||||||||||||||||| |||||| Sbjct: 1285 tgaggacgaggaggaggaggagga 1308
>ref|XM_868640.1| PREDICTED: Bos taurus similar to Ran GTPase-activating protein 1, transcript variant 2 (LOC616055), mRNA Length = 2936 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 tgaggacgaggaggagggggagga 201 ||||||||||||||||| |||||| Sbjct: 1366 tgaggacgaggaggaggaggagga 1389
>ref|NM_001183.4| Homo sapiens ATPase, H+ transporting, lysosomal accessory protein 1 (ATP6AP1), mRNA Length = 2109 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 186 tccgccgctgccgccgccgc 167
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcg 280 |||||||||||||||||||| Sbjct: 36161 ccgccgctgccgccgccgcg 36142
>gb|BC070879.1| Rattus norvegicus reticulon 4, mRNA (cDNA clone IMAGE:7096609), complete cds Length = 2410 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 gaggacgaggaggagggggaggac 202 |||||||||||||||| ||||||| Sbjct: 479 gaggacgaggaggaggaggaggac 502
>ref|NM_011141.1| Mus musculus POU domain, class 3, transcription factor 1 (Pou3f1), mRNA Length = 1517 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcg 280 |||||||||||||||||||| Sbjct: 157 ccgccgctgccgccgccgcg 138
>gb|DQ440389.1| Aedes aegypti clone AET-523 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon polypeptide mRNA, complete cds Length = 681 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 gaggacgaggaggagggggaggac 202 |||||||||||||||| ||||||| Sbjct: 113 gaggacgaggaggaggaggaggac 136
>gb|AC123075.5| Mus musculus BAC clone RP23-181C16 from chromosome 3, complete sequence Length = 198063 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 tgaggacgaggaggagggggagga 201 |||||| ||||||||||||||||| Sbjct: 59469 tgaggaggaggaggagggggagga 59446
>gb|AC141888.4| Mus musculus BAC clone RP23-462H3 from chromosome 19, complete sequence Length = 185192 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 tgaggacgaggaggagggggagga 201 |||||| ||||||||||||||||| Sbjct: 136553 tgaggaggaggaggagggggagga 136530
>gb|AC124459.5| Mus musculus BAC clone RP24-140E5 from chromosome 19, complete sequence Length = 170323 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 4606 tccgccgctgccgccgccgc 4625
>gb|AC124532.4| Mus musculus BAC clone RP23-312P22 from chromosome 15, complete sequence Length = 218337 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 tgaggacgaggaggagggggagga 201 |||||| ||||||||||||||||| Sbjct: 67157 tgaggaggaggaggagggggagga 67134
>ref|NM_008592.2| Mus musculus forkhead box C1 (Foxc1), mRNA Length = 3990 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcgctcg 284 ||||||| |||||||||||||||| Sbjct: 2042 ccgccgcagccgccgccgcgctcg 2019
>ref|NM_014712.1| Homo sapiens SET domain containing 1A (SETD1A), mRNA Length = 6447 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 tgaggacgaggaggagggggagga 201 ||||||||||||||||| |||||| Sbjct: 3836 tgaggacgaggaggaggaggagga 3813
>ref|NM_213102.1| Danio rerio zgc:65871 (zgc:65871), mRNA Length = 1439 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 gaggacgaggaggaggggga 198 |||||||||||||||||||| Sbjct: 481 gaggacgaggaggaggggga 500
>ref|NM_006806.3| Homo sapiens BTG family, member 3 (BTG3), mRNA Length = 1378 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 148 tccgccgctgccgccgccgc 129
>ref|NM_002721.3| Homo sapiens protein phosphatase 6, catalytic subunit (PPP6C), mRNA Length = 1563 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 2 tccgccgctgccgccgccgc 21
>ref|NM_017998.1| Homo sapiens chromosome 9 open reading frame 40 (C9orf40), mRNA Length = 1946 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 563 tccgccgctgccgccgccgc 582
>gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0042F15, complete sequence Length = 162959 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ggcgtccgccgctgccgccgccgc 279 |||||||||||| ||||||||||| Sbjct: 35649 ggcgtccgccgccgccgccgccgc 35672
>gb|AC023175.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-69B14, complete sequence Length = 195667 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gaggaggagggggaggacca 204 |||||||||||||||||||| Sbjct: 191469 gaggaggagggggaggacca 191450
>gb|AC165944.3| Mus musculus chromosome 3, clone RP24-134A8, complete sequence Length = 175118 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 78741 tccgccgctgccgccgccgc 78760
>gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBa0059J06, complete sequence Length = 185449 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 179181 tccgccgctgccgccgccgc 179162
>gb|AC091396.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-298M8, complete sequence Length = 237142 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gaggaggagggggaggacca 204 |||||||||||||||||||| Sbjct: 9367 gaggaggagggggaggacca 9348
>gb|AC158364.4| Mus musculus BAC clone RP23-187J8 from chromosome 8, complete sequence Length = 208153 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 tgaggacgaggaggagggggagga 201 |||||| ||||||||||||||||| Sbjct: 176905 tgaggaggaggaggagggggagga 176882
>ref|XM_988604.1| PREDICTED: Mus musculus hypothetical protein LOC676263 (LOC676263), mRNA Length = 714 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 151 tccgccgctgccgccgccgc 132
>gb|AC118704.17| Mus musculus chromosome 13, clone RP24-114K21, complete sequence Length = 197574 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcg 280 |||||||||||||||||||| Sbjct: 180971 ccgccgctgccgccgccgcg 180990
>ref|XM_985951.1| PREDICTED: Mus musculus hypothetical protein LOC671278 (LOC671278), mRNA Length = 2054 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 1868 tccgccgctgccgccgccgc 1887
>ref|XM_981456.1| PREDICTED: Mus musculus hypothetical protein LOC666080 (LOC666080), mRNA Length = 2055 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 1869 tccgccgctgccgccgccgc 1888
>ref|XM_127483.6| PREDICTED: Mus musculus similar to Ankyrin repeat domain protein 11 (Ankyrin repeat-containing cofactor 1) (LOC625662), mRNA Length = 3570 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 gccgagggagagcgacttcg 161 |||||||||||||||||||| Sbjct: 3078 gccgagggagagcgacttcg 3097
>ref|XM_913173.2| PREDICTED: Mus musculus similar to Ankyrin repeat domain protein 11 (Ankyrin repeat-containing cofactor 1) (LOC625662), mRNA Length = 3570 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 gccgagggagagcgacttcg 161 |||||||||||||||||||| Sbjct: 3078 gccgagggagagcgacttcg 3097
>ref|XM_974983.1| PREDICTED: Mus musculus similar to Ankyrin repeat domain protein 11 (Ankyrin repeat-containing cofactor 1) (LOC625662), mRNA Length = 3267 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 gccgagggagagcgacttcg 161 |||||||||||||||||||| Sbjct: 3151 gccgagggagagcgacttcg 3170
>ref|XM_845030.1| PREDICTED: Canis familiaris similar to nucleosome assembly protein 1-like 5 (LOC607931), mRNA Length = 537 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 170 gaagagtttgaggacgaggaggagggggagga 201 ||||||| ||||| ||||||||||||||||| Sbjct: 400 gaagagtacgaggatgaggaggagggggagga 431
>gb|AC139174.3| Oryza sativa chromosome 3 BAC OSJNBb0065L20 genomic sequence, complete sequence Length = 167427 Score = 40.1 bits (20), Expect = 6.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 252 gcgaggcgtccgccgctgccgccgccgc 279 |||||||| ||||||||||||||||||| Sbjct: 89981 gcgaggcg-ccgccgctgccgccgccgc 90007
>ref|XM_355325.5| PREDICTED: Mus musculus PR domain containing 12 (Prdm12), mRNA Length = 1489 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcg 280 |||||||||||||||||||| Sbjct: 1427 ccgccgctgccgccgccgcg 1446
>gb|AC115410.4| Rattus norvegicus 2 BAC CH230-46P5 (Children's Hospital Oakland Research Institute) complete sequence Length = 232501 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcg 280 |||||||||||||||||||| Sbjct: 61788 ccgccgctgccgccgccgcg 61807
>ref|XM_984550.1| PREDICTED: Mus musculus hypothetical protein LOC666551 (LOC666551), mRNA Length = 1071 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 gtccgccgctgccgccgccg 278 |||||||||||||||||||| Sbjct: 787 gtccgccgctgccgccgccg 806
>ref|XM_979787.1| PREDICTED: Mus musculus PR domain containing 12 (Prdm12), mRNA Length = 1489 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcg 280 |||||||||||||||||||| Sbjct: 1427 ccgccgctgccgccgccgcg 1446
>ref|XM_914950.2| PREDICTED: Mus musculus PR domain containing 12 (Prdm12), mRNA Length = 1962 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ccgccgctgccgccgccgcg 280 |||||||||||||||||||| Sbjct: 1504 ccgccgctgccgccgccgcg 1523
>gb|AF148805.2| Human herpesvirus 8 isolate GK18, complete genome Length = 137969 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 gaggacgaggaggagggggaggac 202 |||||||||||||||| ||||||| Sbjct: 126297 gaggacgaggaggaggaggaggac 126274
>gb|AC115629.3| Mus musculus BAC clone RP23-74J16 from chromosome 5, complete sequence Length = 242126 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 gaggacgaggaggagggggaggac 202 |||||||||||||||| ||||||| Sbjct: 124574 gaggacgaggaggaggaggaggac 124551
>gb|AC122882.4| Mus musculus BAC clone RP23-80M17 from chromosome 7, complete sequence Length = 260989 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 gaggacgaggaggagggggaggac 202 |||||||||||||||| ||||||| Sbjct: 183589 gaggacgaggaggaggaggaggac 183612
>ref|XM_543291.2| PREDICTED: Canis familiaris similar to neuronal guanine nucleotide exchange factor (LOC486165), mRNA Length = 2252 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 gaggacgaggaggagggggaggac 202 |||||||||||||||| ||||||| Sbjct: 748 gaggacgaggaggaggaggaggac 771
>gb|AY147849.1| Homo sapiens MINDBOMB (MIB) mRNA, complete cds Length = 7458 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 255 tccgccgctgccgccgccgc 236
>ref|XM_542531.2| PREDICTED: Canis familiaris similar to developing brain homeobox 1 (predicted) (LOC485412), mRNA Length = 1041 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 gaggacgaggaggagggggaggac 202 ||||||||||||||||| |||||| Sbjct: 997 gaggacgaggaggagggcgaggac 1020
>ref|XM_756423.1| Ustilago maydis 521 hypothetical protein (UM05369.1) partial mRNA Length = 3882 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 gaggacgaggaggagggggaggac 202 |||||||||||||||| ||||||| Sbjct: 3439 gaggacgaggaggaggaggaggac 3462
>emb|CR450806.9| Zebrafish DNA sequence from clone DKEY-110O13 in linkage group 24, complete sequence Length = 217292 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gaggaggagggggaggacca 204 |||||||||||||||||||| Sbjct: 182393 gaggaggagggggaggacca 182374
>ref|XM_746883.1| Aspergillus fumigatus Af293 transcription initiation protein spt5 (Afu4g08500) partial mRNA Length = 3177 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 gacgaggaggagggggagga 201 |||||||||||||||||||| Sbjct: 301 gacgaggaggagggggagga 320
>ref|XM_386381.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG06205.1) partial mRNA Length = 3561 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 170 gaagagtttgaggacgaggaggagggggagga 201 ||||||| |||||||||||||||| |||||| Sbjct: 214 gaagagtgggaggacgaggaggaggaggagga 245
>gb|AC146102.2| Pan troglodytes BAC clone RP43-21L13 from 7, complete sequence Length = 191971 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 173429 tccgccgctgccgccgccgc 173448
>gb|AY337313.1| Homo sapiens Ran-binding protein 10 (RANBP10) mRNA, complete cds Length = 5305 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 gaggacgaggaggagggggaggac 202 |||||||||||||||| ||||||| Sbjct: 1378 gaggacgaggaggaggaggaggac 1355
>emb|CT009683.6| Pig DNA sequence from clone PigE-81M6 on chromosome 7, complete sequence Length = 134846 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 114886 tccgccgctgccgccgccgc 114905
>gb|AC123811.3| Mus musculus BAC clone RP24-179L19 from chromosome 9, complete sequence Length = 204171 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 179 gaggacgaggaggagggggaggaccacg 206 ||||| |||||||||| ||||||||||| Sbjct: 58620 gaggaggaggaggaggaggaggaccacg 58647
>gb|AC122929.4| Mus musculus BAC clone RP23-12A18 from chromosome 6, complete sequence Length = 252503 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 160490 tccgccgctgccgccgccgc 160509
>ref|XM_800755.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506915.10) partial mRNA Length = 2778 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcgtccgccgctgccgccgc 276 |||||||||||||||||||| Sbjct: 151 gcgtccgccgctgccgccgc 170
>gb|AC122821.4| Mus musculus BAC clone RP23-201I4 from chromosome 17, complete sequence Length = 220013 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 163941 tccgccgctgccgccgccgc 163960
>gb|AY453179.1| Bos grunniens endothelin 1 gene, exon 1 and 5' UTR Length = 242 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ccgccgctgccgccgccgcg 280 |||||||||||||||||||| Sbjct: 154 ccgccgctgccgccgccgcg 135
>ref|XM_858356.1| PREDICTED: Canis familiaris similar to Serine/threonine protein phosphatase 6 (PP6), transcript variant 3 (LOC608922), mRNA Length = 3170 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tccgccgctgccgccgccgc 279 |||||||||||||||||||| Sbjct: 37 tccgccgctgccgccgccgc 56 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,405,217 Number of Sequences: 3902068 Number of extensions: 4405217 Number of successful extensions: 197410 Number of sequences better than 10.0: 576 Number of HSP's better than 10.0 without gapping: 604 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 182458 Number of HSP's gapped (non-prelim): 14951 length of query: 501 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 479 effective length of database: 17,147,199,772 effective search space: 8213508690788 effective search space used: 8213508690788 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)