ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl30e08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
2dbj|AP004725.3| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
3dbj|AP004027.3| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
4dbj|AK066714.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 1e-32
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.10
6dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.10
7dbj|AP003140.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.10
8gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 44 0.41
9gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.41
10ref|XM_785663.1| PREDICTED: Strongylocentrotus purpuratus simila... 44 0.41
11ref|XM_793110.1| PREDICTED: Strongylocentrotus purpuratus simila... 44 0.41
12emb|AL606995.3|OSJN00131 Oryza sativa genomic DNA, chromosome 4,... 44 0.41
13dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.41
14dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.41
15gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.41
16ref|XM_477527.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
17gb|AC107085.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
18gb|AC132483.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
19gb|AC122026.3| Mus musculus BAC clone RP24-390D21 from chromosom... 42 1.6
20ref|XM_501718.1| Yarrowia lipolytica CLIB122, YALI0C11341g predi... 42 1.6
21emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete ... 42 1.6
22dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
23dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
24dbj|AP005674.5| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
25dbj|AK103773.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
26dbj|AP004398.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
27emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 42 1.6
28gb|AC117789.17| Mus musculus chromosome 1, clone RP24-548D18, co... 42 1.6
29gb|AC161358.8| Mus musculus chromosome 18, clone wi1-1930A12, co... 40 6.5
30ref|XM_960107.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.5
31ref|XM_328774.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.5
32gb|AC133085.4| Mus musculus BAC clone RP24-371M11 from chromosom... 40 6.5
33ref|XM_652890.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 6.5
34gb|AF005266.1| Caenorhabditis elegans importin alpha-3 subunit m... 40 6.5
35gb|AC132222.3| Mus musculus BAC clone RP24-549C2 from chromosome... 40 6.5
36gb|U41992.1| Caenorhabditis elegans cosmid F32E10, complete sequ... 40 6.5
37emb|AL591852.10| Human DNA sequence from clone RP11-249H20 on ch... 40 6.5
38emb|AL442635.11| Human DNA sequence from clone RP11-259F16 on ch... 40 6.5
39emb|AL031588.1|HS1163J1 Human DNA sequence from clone RP5-1163J1... 40 6.5
40gb|DQ436495.1| Homo sapiens death-associated protein kinase 1 (D... 40 6.5
41emb|AL834130.1|HSM805285 Homo sapiens mRNA; cDNA DKFZp586D0619 (... 40 6.5
42gb|AC157603.4| Mus musculus BAC clone RP23-55O6 from chromosome ... 40 6.5
43emb|CR626723.1| full-length cDNA clone CS0DI075YL06 of Placenta ... 40 6.5
44emb|CR626120.1| full-length cDNA clone CS0CAP004YN15 of Thymus o... 40 6.5
45dbj|AK097319.1| Homo sapiens cDNA FLJ40000 fis, clone STOMA20032... 40 6.5
46emb|CR597748.1| full-length cDNA clone CS0DF026YD23 of Fetal bra... 40 6.5
47emb|CR590232.1| full-length cDNA clone CS0DI039YN04 of Placenta ... 40 6.5
48dbj|AK001999.1| Homo sapiens cDNA FLJ11137 fis, clone PLACE10064... 40 6.5
49gb|AC098566.3| Oryza sativa chromosome 10 clone OSJNBa0051J07, c... 40 6.5
50gb|AF309494.1|AF309494 Chlamydomonas reinhardtii vegetative cell... 40 6.5
51ref|NM_018337.2| Homo sapiens zinc finger protein 444 (ZNF444), ... 40 6.5
52gb|AC024580.6| Homo sapiens chromosome 19 clone CTD-2621I17, com... 40 6.5
53gb|AC138389.3| Homo sapiens chromosome 3 clone RP11-24E1, comple... 40 6.5
54gb|AC154817.2| Mus musculus BAC clone RP23-72G6 from chromosome ... 40 6.5
55gb|AC156566.3| Mus musculus BAC clone RP23-337B16 from chromosom... 40 6.5
56gb|AC010428.7| Homo sapiens chromosome 5 clone CTD-2199C13, comp... 40 6.5
57gb|AF399823.1|AF399823 Leishmania infantum replication protein A... 40 6.5
58ref|NM_068826.3| Caenorhabditis elegans IMportin Alpha family me... 40 6.5
59dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
60gb|AC154733.2| Mus musculus BAC clone RP24-380I6 from chromosome... 40 6.5
61ref|XM_316832.2| Anopheles gambiae str. PEST ENSANGP00000010269 ... 40 6.5
62emb|CT025616.13| Mouse DNA sequence from clone RP23-451G17 on ch... 40 6.5
63gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
64gb|AC004699.1|AC004699 Homo sapiens chromosome 19, cosmid R31973... 40 6.5
65gb|AC155292.2| Mus musculus BAC clone RP24-440O21 from chromosom... 40 6.5
66gb|U15969.1|BTU15969 Bos taurus (hst) gene, complete cds 40 6.5
67dbj|AB027413.1| Monodelphis domestica mRNA for apolipoprotein B,... 40 6.5
68dbj|AB052955.1| Homo sapiens EZF-2 mRNA for endothelial zinc fin... 40 6.5
69dbj|AB052954.1| Homo sapiens EZF-2 mRNA for endothelial zinc fin... 40 6.5
70dbj|AK074063.1| Homo sapiens mRNA for FLJ00134 protein 40 6.5 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  149 bits (75), Expect = 1e-32
 Identities = 114/127 (89%)
 Strand = Plus / Plus

                                                                           
Query: 353     gagtggagcggggacgcgatacgccggcgtttccttgatttctacgcagcccgtggccac 412
               ||||||||||||||||| |||||||| ||||||||||||||||| || ||||||||||||
Sbjct: 7586547 gagtggagcggggacgccatacgccgacgtttccttgatttctatgctgcccgtggccac 7586606

                                                                           
Query: 413     aagatactcccgagctcgtctctcgtgcccgatgaccccaccgtgttcctcaccatagct 472
               ||||| || || |||||||| || ||||| ||||||||||||||||||||||| || || 
Sbjct: 7586607 aagatccttcctagctcgtcgcttgtgccagatgaccccaccgtgttcctcactatcgcc 7586666

                      
Query: 473     gggatgc 479
               |||||||
Sbjct: 7586667 gggatgc 7586673
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>dbj|AP004725.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0412C04
          Length = 146849

 Score =  149 bits (75), Expect = 1e-32
 Identities = 114/127 (89%)
 Strand = Plus / Plus

                                                                          
Query: 353    gagtggagcggggacgcgatacgccggcgtttccttgatttctacgcagcccgtggccac 412
              ||||||||||||||||| |||||||| ||||||||||||||||| || ||||||||||||
Sbjct: 146478 gagtggagcggggacgccatacgccgacgtttccttgatttctatgctgcccgtggccac 146537

                                                                          
Query: 413    aagatactcccgagctcgtctctcgtgcccgatgaccccaccgtgttcctcaccatagct 472
              ||||| || || |||||||| || ||||| ||||||||||||||||||||||| || || 
Sbjct: 146538 aagatccttcctagctcgtcgcttgtgccagatgaccccaccgtgttcctcactatcgcc 146597

                     
Query: 473    gggatgc 479
              |||||||
Sbjct: 146598 gggatgc 146604
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>dbj|AP004027.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OJ1136_C11
          Length = 124827

 Score =  149 bits (75), Expect = 1e-32
 Identities = 114/127 (89%)
 Strand = Plus / Plus

                                                                        
Query: 353  gagtggagcggggacgcgatacgccggcgtttccttgatttctacgcagcccgtggccac 412
            ||||||||||||||||| |||||||| ||||||||||||||||| || ||||||||||||
Sbjct: 9802 gagtggagcggggacgccatacgccgacgtttccttgatttctatgctgcccgtggccac 9861

                                                                        
Query: 413  aagatactcccgagctcgtctctcgtgcccgatgaccccaccgtgttcctcaccatagct 472
            ||||| || || |||||||| || ||||| ||||||||||||||||||||||| || || 
Sbjct: 9862 aagatccttcctagctcgtcgcttgtgccagatgaccccaccgtgttcctcactatcgcc 9921

                   
Query: 473  gggatgc 479
            |||||||
Sbjct: 9922 gggatgc 9928
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>dbj|AK066714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088K03, full
           insert sequence
          Length = 3176

 Score =  149 bits (75), Expect = 1e-32
 Identities = 114/127 (89%)
 Strand = Plus / Plus

                                                                       
Query: 353 gagtggagcggggacgcgatacgccggcgtttccttgatttctacgcagcccgtggccac 412
           ||||||||||||||||| |||||||| ||||||||||||||||| || ||||||||||||
Sbjct: 340 gagtggagcggggacgccatacgccgacgtttccttgatttctatgctgcccgtggccac 399

                                                                       
Query: 413 aagatactcccgagctcgtctctcgtgcccgatgaccccaccgtgttcctcaccatagct 472
           ||||| || || |||||||| || ||||| ||||||||||||||||||||||| || || 
Sbjct: 400 aagatccttcctagctcgtcgcttgtgccagatgaccccaccgtgttcctcactatcgcc 459

                  
Query: 473 gggatgc 479
           |||||||
Sbjct: 460 gggatgc 466
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 73       cgccggcgtcgcccgctcctccc 95
                |||||||||||||||||||||||
Sbjct: 41098554 cgccggcgtcgcccgctcctccc 41098576



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 73       cgccggcgtcgcccgctcctccc 95
                |||||||||||||||||||||||
Sbjct: 10833931 cgccggcgtcgcccgctcctccc 10833953
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>dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0492G09
          Length = 142239

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 73     cgccggcgtcgcccgctcctccc 95
              |||||||||||||||||||||||
Sbjct: 135484 cgccggcgtcgcccgctcctccc 135506
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>dbj|AP003140.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0025P13
          Length = 133242

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 73    cgccggcgtcgcccgctcctccc 95
             |||||||||||||||||||||||
Sbjct: 20947 cgccggcgtcgcccgctcctccc 20969
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 224     ccggcgaggaggacgtcagcgacgcc 249
               |||||||||||||||||| |||||||
Sbjct: 2441077 ccggcgaggaggacgtcatcgacgcc 2441052
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>gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0007P22, complete sequence
          Length = 148068

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 74    gccggcgtcgcccgctcctccc 95
             ||||||||||||||||||||||
Sbjct: 31408 gccggcgtcgcccgctcctccc 31429
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>ref|XM_785663.1| PREDICTED: Strongylocentrotus purpuratus similar to predicted CDS,
           reverse transcriptase family member (5C378) (LOC585857),
           mRNA
          Length = 954

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 23  cagcctctccctcgctcccgagctca 48
           |||||||||||||| |||||||||||
Sbjct: 225 cagcctctccctcgatcccgagctca 250
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>ref|XM_793110.1| PREDICTED: Strongylocentrotus purpuratus similar to reverse
           transcriptase family member (1F383) (LOC593639), mRNA
          Length = 1290

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 23  cagcctctccctcgctcccgagctca 48
           |||||||||||||| |||||||||||
Sbjct: 639 cagcctctccctcgatcccgagctca 664
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>emb|AL606995.3|OSJN00131 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085H11,
             complete sequence
          Length = 132394

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 53    gcctcccctccgcctcacctcg 74
             ||||||||||||||||||||||
Sbjct: 75837 gcctcccctccgcctcacctcg 75816
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 53       gcctcccctccgcctcacctcg 74
                ||||||||||||||||||||||
Sbjct: 16415271 gcctcccctccgcctcacctcg 16415250
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 74       gccggcgtcgcccgctcctccc 95
                ||||||||||||||||||||||
Sbjct: 22421408 gccggcgtcgcccgctcctccc 22421387
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 74       gccggcgtcgcccgctcctccc 95
                ||||||||||||||||||||||
Sbjct: 22731319 gccggcgtcgcccgctcctccc 22731298
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>ref|XM_477527.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1061

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 134 gcctctcctccttccctcccagccg 158
           ||||||||||||||||| |||||||
Sbjct: 176 gcctctcctccttcccttccagccg 200
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>gb|AC107085.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1764_D01,
              complete sequence
          Length = 164709

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 75     ccggcgtcgcccgctcctccc 95
              |||||||||||||||||||||
Sbjct: 161123 ccggcgtcgcccgctcctccc 161103
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>gb|AC132483.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBa0014C03, complete sequence
          Length = 143739

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 75   ccggcgtcgcccgctcctccc 95
            |||||||||||||||||||||
Sbjct: 6388 ccggcgtcgcccgctcctccc 6368
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>gb|AC122026.3| Mus musculus BAC clone RP24-390D21 from chromosome 1, complete sequence
          Length = 205642

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 135   cctctcctccttccctcccag 155
             |||||||||||||||||||||
Sbjct: 47120 cctctcctccttccctcccag 47140
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>ref|XM_501718.1| Yarrowia lipolytica CLIB122, YALI0C11341g predicted mRNA
          Length = 933

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 44 gctcagctcgcctcccctccgcctc 68
          |||||||||||||||||||| ||||
Sbjct: 46 gctcagctcgcctcccctcctcctc 70
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>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29
          Length = 313800

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 314    gcgaacccggtgacggcggcg 334
              |||||||||||||||||||||
Sbjct: 282247 gcgaacccggtgacggcggcg 282267
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 134      gcctctcctccttccctcccagccg 158
                ||||||||||||||||| |||||||
Sbjct: 11250429 gcctctcctccttcccttccagccg 11250453
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 75       ccggcgtcgcccgctcctccc 95
                |||||||||||||||||||||
Sbjct: 18993745 ccggcgtcgcccgctcctccc 18993725
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>dbj|AP005674.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1126F07
          Length = 125007

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 134   gcctctcctccttccctcccagccg 158
             ||||||||||||||||| |||||||
Sbjct: 64407 gcctctcctccttcccttccagccg 64431
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>dbj|AK103773.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033143M03, full
           insert sequence
          Length = 1061

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 134 gcctctcctccttccctcccagccg 158
           ||||||||||||||||| |||||||
Sbjct: 176 gcctctcctccttcccttccagccg 200
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>dbj|AP004398.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0438G07
          Length = 138878

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 134   gcctctcctccttccctcccagccg 158
             ||||||||||||||||| |||||||
Sbjct: 90405 gcctctcctccttcccttccagccg 90429
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>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 44      gctcagctcgcctcccctccgcctc 68
               |||||||||||||||||||| ||||
Sbjct: 1563158 gctcagctcgcctcccctcctcctc 1563134
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>gb|AC117789.17| Mus musculus chromosome 1, clone RP24-548D18, complete sequence
          Length = 180733

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 135    cctctcctccttccctcccag 155
              |||||||||||||||||||||
Sbjct: 136462 cctctcctccttccctcccag 136482
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>gb|AC161358.8| Mus musculus chromosome 18, clone wi1-1930A12, complete sequence
          Length = 42218

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 130   cctcgcctctcctccttccctccc 153
             |||| |||||||||||||||||||
Sbjct: 18064 cctctcctctcctccttccctccc 18087
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>ref|XM_960107.1| Neurospora crassa OR74A hypothetical protein (NCU08069.1) partial
            mRNA
          Length = 1734

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 321  cggtgacggcggcgggaacg 340
            ||||||||||||||||||||
Sbjct: 1596 cggtgacggcggcgggaacg 1615
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>ref|XM_328774.1| Neurospora crassa OR74A hypothetical protein (NCU08069.1) partial
            mRNA
          Length = 1734

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 321  cggtgacggcggcgggaacg 340
            ||||||||||||||||||||
Sbjct: 1596 cggtgacggcggcgggaacg 1615
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>gb|AC133085.4| Mus musculus BAC clone RP24-371M11 from chromosome 7, complete sequence
          Length = 145983

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 3      ggtttgggccagcccagcca 22
              ||||||||||||||||||||
Sbjct: 121882 ggtttgggccagcccagcca 121901
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>ref|XM_652890.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0378.2), mRNA
          Length = 840

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 313 agcgaacccggtgacggcgg 332
           ||||||||||||||||||||
Sbjct: 298 agcgaacccggtgacggcgg 317
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>gb|AF005266.1| Caenorhabditis elegans importin alpha-3 subunit mRNA, complete cds
          Length = 2551

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 279  tggccagtcagtcgagccaatcga 302
            |||||||||||||||| |||||||
Sbjct: 2456 tggccagtcagtcgagacaatcga 2433
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>gb|AC132222.3| Mus musculus BAC clone RP24-549C2 from chromosome 5, complete sequence
          Length = 173603

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 90    cctcccaccccgccgccctcatgc 113
             ||||||||||| ||||||||||||
Sbjct: 56280 cctcccacccccccgccctcatgc 56303
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>gb|U41992.1| Caenorhabditis elegans cosmid F32E10, complete sequence
          Length = 33318

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 279 tggccagtcagtcgagccaatcga 302
           |||||||||||||||| |||||||
Sbjct: 374 tggccagtcagtcgagacaatcga 397
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>emb|AL591852.10| Human DNA sequence from clone RP11-249H20 on chromosome 9 Contains part
             of the DAPK1 gene for death-assodeath-associated protein
             kinase 1, complete sequence
          Length = 72904

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   cctctcctccttccctccca 154
             ||||||||||||||||||||
Sbjct: 36022 cctctcctccttccctccca 36003
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>emb|AL442635.11| Human DNA sequence from clone RP11-259F16 on chromosome 10 Contains the
             PRG1 gene for proteoglycan 1, secretory granule (PPG, PRG,
             SERGLYCIN), the 5' end of the VPS26 gene for vacuolar
             protein sorting 26 (yeast) (HB58, Hbeta58, FLJ12930), a
             ribosomal protein S12 (RPS12) pseudogene and a CpG island,
             complete sequence
          Length = 143093

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 135   cctctcctccttccctcccagccg 158
             |||||||||||||| |||||||||
Sbjct: 96049 cctctcctccttccttcccagccg 96072
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>emb|AL031588.1|HS1163J1 Human DNA sequence from clone RP5-1163J1 on chromosome 22q13.2-13.33,
             complete sequence
          Length = 127168

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 448   ccccaccgtgttcctcacca 467
             ||||||||||||||||||||
Sbjct: 51251 ccccaccgtgttcctcacca 51232
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>gb|DQ436495.1| Homo sapiens death-associated protein kinase 1 (DAPK1) gene, complete cds
          Length = 212999

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 135    cctctcctccttccctccca 154
              ||||||||||||||||||||
Sbjct: 108828 cctctcctccttccctccca 108809
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>emb|AL834130.1|HSM805285 Homo sapiens mRNA; cDNA DKFZp586D0619 (from clone DKFZp586D0619)
          Length = 2060

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 135  cctctcctccttccctccca 154
            ||||||||||||||||||||
Sbjct: 1436 cctctcctccttccctccca 1455
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>gb|AC157603.4| Mus musculus BAC clone RP23-55O6 from chromosome 7, complete sequence
          Length = 151519

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     ggtttgggccagcccagcca 22
             ||||||||||||||||||||
Sbjct: 66361 ggtttgggccagcccagcca 66342
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>emb|CR626723.1| full-length cDNA clone CS0DI075YL06 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1841

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 135  cctctcctccttccctccca 154
            ||||||||||||||||||||
Sbjct: 1266 cctctcctccttccctccca 1285
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>emb|CR626120.1| full-length cDNA clone CS0CAP004YN15 of Thymus of Homo sapiens
           (human)
          Length = 1081

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 135 cctctcctccttccctccca 154
           ||||||||||||||||||||
Sbjct: 484 cctctcctccttccctccca 503
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>dbj|AK097319.1| Homo sapiens cDNA FLJ40000 fis, clone STOMA2003289, weakly similar to
            ZINC FINGER PROTEIN CKR1
          Length = 3291

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 135  cctctcctccttccctccca 154
            ||||||||||||||||||||
Sbjct: 2684 cctctcctccttccctccca 2703
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>emb|CR597748.1| full-length cDNA clone CS0DF026YD23 of Fetal brain of Homo sapiens
            (human)
          Length = 1829

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 135  cctctcctccttccctccca 154
            ||||||||||||||||||||
Sbjct: 1265 cctctcctccttccctccca 1284
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>emb|CR590232.1| full-length cDNA clone CS0DI039YN04 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1859

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 135  cctctcctccttccctccca 154
            ||||||||||||||||||||
Sbjct: 1295 cctctcctccttccctccca 1314
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>dbj|AK001999.1| Homo sapiens cDNA FLJ11137 fis, clone PLACE1006438, weakly similar to
            ZINC FINGER PROTEIN 165
          Length = 1907

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 135  cctctcctccttccctccca 154
            ||||||||||||||||||||
Sbjct: 1298 cctctcctccttccctccca 1317
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>gb|AC098566.3| Oryza sativa chromosome 10 clone OSJNBa0051J07, complete sequence
          Length = 148301

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 211    tggccgaggggcgccggcga 230
              ||||||||||||||||||||
Sbjct: 107884 tggccgaggggcgccggcga 107865
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>gb|AF309494.1|AF309494 Chlamydomonas reinhardtii vegetative cell wall protein gp1 (GP1)
            gene, complete cds
          Length = 3258

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 81   tcgcccgctcctcccacccc 100
            ||||||||||||||||||||
Sbjct: 1374 tcgcccgctcctcccacccc 1393
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>ref|NM_018337.2| Homo sapiens zinc finger protein 444 (ZNF444), mRNA
          Length = 2059

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 135  cctctcctccttccctccca 154
            ||||||||||||||||||||
Sbjct: 1435 cctctcctccttccctccca 1454
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>gb|AC024580.6| Homo sapiens chromosome 19 clone CTD-2621I17, complete sequence
          Length = 193609

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 135    cctctcctccttccctccca 154
              ||||||||||||||||||||
Sbjct: 155634 cctctcctccttccctccca 155653
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>gb|AC138389.3| Homo sapiens chromosome 3 clone RP11-24E1, complete sequence
          Length = 163322

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   ttgggctccggcgacaacat 211
             ||||||||||||||||||||
Sbjct: 81649 ttgggctccggcgacaacat 81668
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>gb|AC154817.2| Mus musculus BAC clone RP23-72G6 from chromosome 13, complete sequence
          Length = 143739

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 130   cctcgcctctcctccttccctccc 153
             |||| |||||||||||||||||||
Sbjct: 11804 cctcccctctcctccttccctccc 11781
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>gb|AC156566.3| Mus musculus BAC clone RP23-337B16 from chromosome 7, complete sequence
          Length = 198071

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     ggtttgggccagcccagcca 22
             ||||||||||||||||||||
Sbjct: 12021 ggtttgggccagcccagcca 12040
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>gb|AC010428.7| Homo sapiens chromosome 5 clone CTD-2199C13, complete sequence
          Length = 134420

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   cctctcctccttccctccca 154
             ||||||||||||||||||||
Sbjct: 88233 cctctcctccttccctccca 88214
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>gb|AF399823.1|AF399823 Leishmania infantum replication protein A subunit 1 mRNA, complete
           cds
          Length = 2594

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 128 cgcctcgcctctcctccttccctc 151
           ||||||||||| ||||||||||||
Sbjct: 513 cgcctcgcctcgcctccttccctc 536
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>ref|NM_068826.3| Caenorhabditis elegans IMportin Alpha family member (ima-3) (ima-3)
            mRNA, complete cds
          Length = 2639

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 279  tggccagtcagtcgagccaatcga 302
            |||||||||||||||| |||||||
Sbjct: 2549 tggccagtcagtcgagacaatcga 2526
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 211     tggccgaggggcgccggcga 230
               ||||||||||||||||||||
Sbjct: 4960963 tggccgaggggcgccggcga 4960944
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>gb|AC154733.2| Mus musculus BAC clone RP24-380I6 from chromosome 13, complete sequence
          Length = 209751

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 130    cctcgcctctcctccttccctccc 153
              |||| |||||||||||||||||||
Sbjct: 192741 cctcccctctcctccttccctccc 192718
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>ref|XM_316832.2| Anopheles gambiae str. PEST ENSANGP00000010269 (ENSANGG00000007780),
            partial mRNA
          Length = 2820

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 199  ccggcgacaacatggccgag 218
            ||||||||||||||||||||
Sbjct: 1814 ccggcgacaacatggccgag 1833
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>emb|CT025616.13| Mouse DNA sequence from clone RP23-451G17 on chromosome 13, complete
             sequence
          Length = 144243

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 279   tggccagtcagtcgagccaa 298
             ||||||||||||||||||||
Sbjct: 79120 tggccagtcagtcgagccaa 79101
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 211     tggccgaggggcgccggcga 230
               ||||||||||||||||||||
Sbjct: 4961750 tggccgaggggcgccggcga 4961731
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>gb|AC004699.1|AC004699 Homo sapiens chromosome 19, cosmid R31973, complete sequence
          Length = 46791

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 10   gccagcccagccacagcctctccc 33
            ||||||||||||||| ||||||||
Sbjct: 9977 gccagcccagccacaacctctccc 9954
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>gb|AC155292.2| Mus musculus BAC clone RP24-440O21 from chromosome 13, complete sequence
          Length = 184951

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 279    tggccagtcagtcgagccaa 298
              ||||||||||||||||||||
Sbjct: 128324 tggccagtcagtcgagccaa 128343
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>gb|U15969.1|BTU15969 Bos taurus (hst) gene, complete cds
          Length = 2250

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 138  ctcctccttccctcccagcc 157
            ||||||||||||||||||||
Sbjct: 1771 ctcctccttccctcccagcc 1790
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>dbj|AB027413.1| Monodelphis domestica mRNA for apolipoprotein B, partial cds
          Length = 5710

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 11   ccagcccagccacagcctctccct 34
            |||| |||||||||||||||||||
Sbjct: 1581 ccaggccagccacagcctctccct 1604
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>dbj|AB052955.1| Homo sapiens EZF-2 mRNA for endothelial zinc finger protein-2,
            complete cds
          Length = 1906

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 135  cctctcctccttccctccca 154
            ||||||||||||||||||||
Sbjct: 1299 cctctcctccttccctccca 1318
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>dbj|AB052954.1| Homo sapiens EZF-2 mRNA for endothelial zinc finger protein-2,
            complete cds
          Length = 1903

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 135  cctctcctccttccctccca 154
            ||||||||||||||||||||
Sbjct: 1296 cctctcctccttccctccca 1315
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>dbj|AK074063.1| Homo sapiens mRNA for FLJ00134 protein
          Length = 5612

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 135  cctctcctccttccctccca 154
            ||||||||||||||||||||
Sbjct: 5011 cctctcctccttccctccca 5030


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,237,163
Number of Sequences: 3902068
Number of extensions: 3237163
Number of successful extensions: 95971
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95083
Number of HSP's gapped (non-prelim): 888
length of query: 479
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 457
effective length of database: 17,147,199,772
effective search space: 7836270295804
effective search space used: 7836270295804
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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