ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl30e07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PI4KA_HUMAN (P42356) Phosphatidylinositol 4-kinase alpha (EC 2.7... 33 0.39
2NEUR_DROVI (Q24746) Protein neuralized 30 2.5
3PI4KA_BOVIN (O02811) Phosphatidylinositol 4-kinase alpha (EC 2.7... 30 4.3
4DSX_DROME (P23023) Protein doublesex 29 7.3
5DRL21_ARATH (Q9LRR5) Putative disease resistance protein At3g14460 28 9.6
6HAND1_SHEEP (Q28555) Heart- and neural crest derivatives-express... 28 9.6
7OTX1L_BRARE (Q90267) Homeobox protein Otx1l (ZOTX3) 28 9.6

>PI4KA_HUMAN (P42356) Phosphatidylinositol 4-kinase alpha (EC 2.7.1.67)|
           (PI4-kinase alpha) (PtdIns-4-kinase alpha) (PI4K-alpha)
          Length = 2044

 Score = 33.1 bits (74), Expect = 0.39
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
 Frame = -1

Query: 338 VMVHTLTSITRIFLVFMSPSLCKLPQQTTPSHANINSYLVLLLTSRH------VMRGRHP 177
           V+VH++T   R FLV  SP L KL +  +  H    + + + +T+ H      VM G+  
Sbjct: 440 VVVHSVTPSLRDFLVIPSPVLVKLYKYHSQYHTVAGNDIKISVTNEHSESTLNVMSGKKS 499

Query: 176 HPTVSRQ 156
            P++  Q
Sbjct: 500 QPSMYEQ 506



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>NEUR_DROVI (Q24746) Protein neuralized|
          Length = 747

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
 Frame = -1

Query: 449 HINSPNTHNALQALASSSHIRDL*TNKRVCTP--PTYGHVMVHTLTSITRIF-LVFMSPS 279
           H N  + HNA  A A+++H+  +  ++ + +P         +H L  I + F LV  SPS
Sbjct: 28  HHNHNHNHNAAAAAAAAAHVLAMENSELLMSPKDKMSSKKKMHLLKKIKKRFGLVRRSPS 87

Query: 278 LCKLPQQTTP 249
            C  P    P
Sbjct: 88  SCPGPNNLPP 97



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>PI4KA_BOVIN (O02811) Phosphatidylinositol 4-kinase alpha (EC 2.7.1.67)|
           (PI4-kinase alpha) (PtdIns-4-kinase alpha) (PI4K-alpha)
          Length = 2043

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
 Frame = -1

Query: 338 VMVHTLTSITRIFLVFMSPSLCKLPQQTTPSHANINSYLVLLLTSRH------VMRGRHP 177
           V+VH++T   R FLV  SP L KL +  +  H    + + + +T+ H      V  G+  
Sbjct: 440 VVVHSVTPSLRDFLVVPSPVLVKLYKCHSQYHTVAGNDIKISVTNEHAESTLNVASGKKS 499

Query: 176 HPTVSRQ 156
            P++  Q
Sbjct: 500 QPSMYEQ 506



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>DSX_DROME (P23023) Protein doublesex|
          Length = 549

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -2

Query: 364 YAHPPHMGM*WC-TLSQASLGSS*YSCHHHYANYHNKPHPHMLT*IAI 224
           +AH  HM      +++Q    S  +S HHH+ N+H  PH    T  A+
Sbjct: 186 HAHHVHMAAAAAASVAQHQHQSHPHSHHHHHQNHHQHPHQQPATQTAL 233



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>DRL21_ARATH (Q9LRR5) Putative disease resistance protein At3g14460|
          Length = 1424

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 6/76 (7%)
 Frame = -1

Query: 278  LCKLPQQTTPSHANINSYLVLLLTSRHVMRGRHPHPTVS----RQANKT--TRSLSPH*S 117
            L  LP+  T S+ N++  L++   S     G HP  T+     R   K   T SL P  S
Sbjct: 1104 LTSLPENLTESYPNLHELLIIACHSLESFPGSHPPTTLKTLYIRDCKKLNFTESLQPTRS 1163

Query: 116  SQAWGYTRVASDSYHL 69
                 Y  + S   +L
Sbjct: 1164 YSQLEYLFIGSSCSNL 1179



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>HAND1_SHEEP (Q28555) Heart- and neural crest derivatives-expressed protein 1|
           (Extraembryonic tissues, heart, autonomic nervous system
           and neural crest derivatives-expressed protein 1)
           (eHAND)
          Length = 204

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -2

Query: 295 YSCHHHYANYHNKPHP 248
           Y+ HHH+ ++H+ PHP
Sbjct: 7   YAHHHHHHHHHHHPHP 22



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>OTX1L_BRARE (Q90267) Homeobox protein Otx1l (ZOTX3)|
          Length = 338

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
 Frame = -3

Query: 471 LNPMXCHAHQQP--QHTQCSXSTSIELTHKRSLN*QESMHTPH 349
           L PM  HAH  P   H+Q S + ++   H      Q S H PH
Sbjct: 244 LAPMTGHAHHHPHAHHSQLSTAAAVSGHHHPHHIGQSSGHHPH 286


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,267,721
Number of Sequences: 219361
Number of extensions: 1371341
Number of successful extensions: 3198
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3168
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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