Clone Name | bastl30e06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | FUSC3_FUSCU (Q8J1X7) Allergen Fus c 3 | 25 | 3.0 | 2 | EXBD_SYNY3 (P72942) Putative biopolymer transport exbD protein | 29 | 6.4 | 3 | SUVR3_ARATH (Q9SRV2) Histone-lysine N-methyltransferase SUVR3 (E... | 28 | 8.4 |
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>FUSC3_FUSCU (Q8J1X7) Allergen Fus c 3| Length = 450 Score = 24.6 bits (52), Expect(2) = 3.0 Identities = 13/37 (35%), Positives = 16/37 (43%) Frame = +1 Query: 85 HHPSHPLRIWTTTDHSQRHIRHHIYSRSPLHSTLSAS 195 H PSHP + H Q H H R HS S++ Sbjct: 101 HAPSHPSHLSHGAPHEQEHA--HEIQRHRAHSAQSSA 135 Score = 23.9 bits (50), Expect(2) = 3.0 Identities = 9/26 (34%), Positives = 14/26 (53%) Frame = +1 Query: 25 PRRDAGDSARRPSVHSIFLYHHPSHP 102 P R + ++ RP I +HH +HP Sbjct: 39 PNRTSRNTPLRPESTEIETHHHANHP 64
>EXBD_SYNY3 (P72942) Putative biopolymer transport exbD protein| Length = 269 Score = 28.9 bits (63), Expect = 6.4 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%) Frame = +1 Query: 46 SARRPSVHSIFL-YHHPSHPLRIWTTTDHSQRHIRHHI 156 S + P H F +HP+ PL +W H Q +R I Sbjct: 4 SPKAPKSHRKFQSIYHPTRPLSLWQDNQHDQGEVRIEI 41
>SUVR3_ARATH (Q9SRV2) Histone-lysine N-methyltransferase SUVR3 (EC 2.1.1.43)| (Suppressor of variegation 3-9-related protein 3) (Su(var)3-9-related protein 3) (Protein SET DOMAIN GROUP 20) Length = 338 Score = 28.5 bits (62), Expect = 8.4 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = -3 Query: 214 RCLGFLDWRRVWSEVASGCRCGAVC 140 +CL F + +E SGC CG+ C Sbjct: 156 KCLAFAGMEEIANECGSGCGCGSDC 180 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,114,402 Number of Sequences: 219361 Number of extensions: 619722 Number of successful extensions: 2143 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2099 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2135 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)