ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl30d12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476784.1| Oryza sativa (japonica cultivar-group), mRNA 76 1e-10
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
3dbj|AP004670.4| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
4emb|AL831720.4| Human DNA sequence from clone RP11-441K23 on chr... 42 1.6
5emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete g... 42 1.6
6dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, co... 42 1.6
7gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete... 42 1.6
8gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, co... 42 1.6
9gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, compl... 42 1.6
10gb|AC003667.3| Homo sapiens X PAC RP1-17L20 (Roswell Park Cancer... 42 1.6
11dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, com... 42 1.6
12dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic... 42 1.6
13emb|CR954167.21| Zebrafish DNA sequence from clone CH211-122N14 ... 42 1.6
14emb|CR382381.12| Zebrafish DNA sequence from clone DKEY-208D15 i... 42 1.6
15emb|CT476800.3| RP43-013D05, complete sequence 42 1.6
16emb|AJ938182.1| Staphylococcus aureus RF122 complete genome 42 1.6
17gb|AC120437.7| Mus musculus chromosome 5, clone RP24-571K14, com... 40 6.4
18emb|BX890591.12| Zebrafish DNA sequence from clone DKEY-184J23 i... 40 6.4
19gb|AC125047.5| Mus musculus BAC clone RP23-354G14 from chromosom... 40 6.4
20gb|AC122336.4| Mus musculus BAC clone RP23-351K21 from chromosom... 40 6.4
21gb|AC126686.3| Mus musculus BAC clone RP23-148C24 from 18, compl... 40 6.4
22gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome 40 6.4
23emb|AL139109.14| Human DNA sequence from clone RP11-291O7 on chr... 40 6.4
24emb|AL136381.12| Human DNA sequence from clone RP5-905H16 on chr... 40 6.4
25emb|AL663076.17| Mouse DNA sequence from clone RP23-6I12 on chro... 40 6.4
26emb|AL627343.16| Mouse DNA sequence from clone RP23-382J14 on ch... 40 6.4
27emb|CR926468.3| Mouse DNA sequence from clone RP24-191A5 on chro... 40 6.4
28gb|AC149578.15| Medicago truncatula clone mth2-94f23, complete s... 40 6.4
29dbj|AK137426.1| Mus musculus 16 days neonate cerebellum cDNA, RI... 40 6.4
30gb|AC008610.7| Homo sapiens chromosome 5 clone CTB-129O4, comple... 40 6.4
31gb|AC023058.17|AC023058 Homo sapiens 3 BAC CTB-187G23 (CalTech H... 40 6.4
32gb|AC026172.3|AC026172 Homo sapiens chromosome 3 clone RP11-168L... 40 6.4
33emb|BX649549.14| Mouse DNA sequence from clone RP23-390D11 on ch... 40 6.4
34emb|AL929064.11| Mouse DNA sequence from clone RP23-442A7 on chr... 40 6.4
35emb|AL390816.4|CNS06C7V Human chromosome 14 DNA sequence BAC R-3... 40 6.4
36gb|AC153792.4| Mus musculus BAC clone RP23-435D23 from 7, comple... 40 6.4
37gb|AC004073.1|AC004073 Human Chromosome X, complete sequence 40 6.4
38emb|AL513354.14| Mouse DNA sequence from clone RP23-150J22 on ch... 40 6.4
39gb|AC026194.4| Homo sapiens chromosome 3 clone RP11-45B16 map 3p... 40 6.4
40gb|AC018506.5| Homo sapiens chromosome 3 clone RP11-58B17 map 3p... 40 6.4 
>ref|XM_476784.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4329

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 120/147 (81%), Gaps = 3/147 (2%)
 Strand = Plus / Plus

                                                                        
Query: 273  gggatgtgcacttcttgtccgtggtagtgctcgtaatatggaaggca---tgggtaacta 329
            ||||||||| |||||||||||||||||| ||| ||  ||||||||||   |||    |||
Sbjct: 1794 gggatgtgcgcttcttgtccgtggtagtactcatagcatggaaggcaatgtggacggcta 1853

                                                                        
Query: 330  tgttccatataaatggaaaaggacggttttatcgtggatgatagatctgggggtggtttc 389
            | |||| |||  ||||||  |||| |||||||| |||||||||||| ||||||| |||||
Sbjct: 1854 ttttccttatcgatggaagcggacagttttatcatggatgatagatatgggggttgtttc 1913

                                       
Query: 390  acaagatgcgaaggtcanatacatgaa 416
              ||||||| ||||||| ||| |||||
Sbjct: 1914 tgaagatgcaaaggtcaaatatatgaa 1940



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                        
Query: 62   caggtgttgcagatgcttcctttgatgccatatcaaaagaggatctagcaatactacaga 121
            ||||||||||||||||| ||| | ||||||||||| || | ||| ||||||| |||||||
Sbjct: 1598 caggtgttgcagatgctgcctgtaatgccatatcagaaaatgatttagcaatgctacaga 1657

             
Query: 122  g 122
            |
Sbjct: 1658 g 1658
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 120/147 (81%), Gaps = 3/147 (2%)
 Strand = Plus / Plus

                                                                           
Query: 273     gggatgtgcacttcttgtccgtggtagtgctcgtaatatggaaggca---tgggtaacta 329
               ||||||||| |||||||||||||||||| ||| ||  ||||||||||   |||    |||
Sbjct: 3894133 gggatgtgcgcttcttgtccgtggtagtactcatagcatggaaggcaatgtggacggcta 3894192

                                                                           
Query: 330     tgttccatataaatggaaaaggacggttttatcgtggatgatagatctgggggtggtttc 389
               | |||| |||  ||||||  |||| |||||||| |||||||||||| ||||||| |||||
Sbjct: 3894193 ttttccttatcgatggaagcggacagttttatcatggatgatagatatgggggttgtttc 3894252

                                          
Query: 390     acaagatgcgaaggtcanatacatgaa 416
                 ||||||| ||||||| ||| |||||
Sbjct: 3894253 tgaagatgcaaaggtcaaatatatgaa 3894279



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                           
Query: 62      caggtgttgcagatgcttcctttgatgccatatcaaaagaggatctagcaatactacaga 121
               ||||||||||||||||| ||| | ||||||||||| || | ||| ||||||| |||||||
Sbjct: 3893937 caggtgttgcagatgctgcctgtaatgccatatcagaaaatgatttagcaatgctacaga 3893996

                
Query: 122     g 122
               |
Sbjct: 3893997 g 3893997
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>dbj|AP004670.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0496D04
          Length = 197358

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 120/147 (81%), Gaps = 3/147 (2%)
 Strand = Plus / Plus

                                                                          
Query: 273    gggatgtgcacttcttgtccgtggtagtgctcgtaatatggaaggca---tgggtaacta 329
              ||||||||| |||||||||||||||||| ||| ||  ||||||||||   |||    |||
Sbjct: 133245 gggatgtgcgcttcttgtccgtggtagtactcatagcatggaaggcaatgtggacggcta 133304

                                                                          
Query: 330    tgttccatataaatggaaaaggacggttttatcgtggatgatagatctgggggtggtttc 389
              | |||| |||  ||||||  |||| |||||||| |||||||||||| ||||||| |||||
Sbjct: 133305 ttttccttatcgatggaagcggacagttttatcatggatgatagatatgggggttgtttc 133364

                                         
Query: 390    acaagatgcgaaggtcanatacatgaa 416
                ||||||| ||||||| ||| |||||
Sbjct: 133365 tgaagatgcaaaggtcaaatatatgaa 133391



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                          
Query: 62     caggtgttgcagatgcttcctttgatgccatatcaaaagaggatctagcaatactacaga 121
              ||||||||||||||||| ||| | ||||||||||| || | ||| ||||||| |||||||
Sbjct: 133049 caggtgttgcagatgctgcctgtaatgccatatcagaaaatgatttagcaatgctacaga 133108

               
Query: 122    g 122
              |
Sbjct: 133109 g 133109
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>emb|AL831720.4| Human DNA sequence from clone RP11-441K23 on chromosome 1, complete
              sequence
          Length = 109218

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 413    tgaacaaaaaaggaaactcag 433
              |||||||||||||||||||||
Sbjct: 102294 tgaacaaaaaaggaaactcag 102314
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>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome
          Length = 2799802

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 216    tataagttctataaacaagta 236
              |||||||||||||||||||||
Sbjct: 668313 tataagttctataaacaagta 668293
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>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome
          Length = 2878529

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 216    tataagttctataaacaagta 236
              |||||||||||||||||||||
Sbjct: 697323 tataagttctataaacaagta 697303
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>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome
          Length = 2809422

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 216    tataagttctataaacaagta 236
              |||||||||||||||||||||
Sbjct: 706703 tataagttctataaacaagta 706683
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>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome
          Length = 2821361

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 216    tataagttctataaacaagta 236
              |||||||||||||||||||||
Sbjct: 618028 tataagttctataaacaagta 618008
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>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome
          Length = 2872769

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 216    tataagttctataaacaagta 236
              |||||||||||||||||||||
Sbjct: 685233 tataagttctataaacaagta 685213
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>gb|AC003667.3| Homo sapiens X PAC RP1-17L20 (Roswell Park Cancer Institute Human PAC
             Library) complete sequence
          Length = 147371

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 133   aaaagaaaggtcaaaaaagaa 153
             |||||||||||||||||||||
Sbjct: 36788 aaaagaaaggtcaaaaaagaa 36768
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>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2
          Length = 2820462

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 216    tataagttctataaacaagta 236
              |||||||||||||||||||||
Sbjct: 669681 tataagttctataaacaagta 669661
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>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome
          Length = 2814816

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 216    tataagttctataaacaagta 236
              |||||||||||||||||||||
Sbjct: 673074 tataagttctataaacaagta 673054
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>emb|CR954167.21| Zebrafish DNA sequence from clone CH211-122N14 in linkage group 8,
            complete sequence
          Length = 160594

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 133  aaaagaaaggtcaaaaaagaa 153
            |||||||||||||||||||||
Sbjct: 1235 aaaagaaaggtcaaaaaagaa 1255
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>emb|CR382381.12| Zebrafish DNA sequence from clone DKEY-208D15 in linkage group 8,
             complete sequence
          Length = 91666

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 133   aaaagaaaggtcaaaaaagaa 153
             |||||||||||||||||||||
Sbjct: 90901 aaaagaaaggtcaaaaaagaa 90921
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>emb|CT476800.3| RP43-013D05, complete sequence
          Length = 207013

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 133   aaaagaaaggtcaaaaaagaa 153
             |||||||||||||||||||||
Sbjct: 30428 aaaagaaaggtcaaaaaagaa 30448
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>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome
          Length = 2742531

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 216    tataagttctataaacaagta 236
              |||||||||||||||||||||
Sbjct: 640056 tataagttctataaacaagta 640036
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>gb|AC120437.7| Mus musculus chromosome 5, clone RP24-571K14, complete sequence
          Length = 147493

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 134    aaagaaaggtcaaaaaagaa 153
              ||||||||||||||||||||
Sbjct: 113556 aaagaaaggtcaaaaaagaa 113575
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>emb|BX890591.12| Zebrafish DNA sequence from clone DKEY-184J23 in linkage group 19,
              complete sequence
          Length = 171079

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 132    gaaaagaaaggtcaaaaaagaata 155
              |||||||||||||| |||||||||
Sbjct: 113623 gaaaagaaaggtcataaaagaata 113600
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>gb|AC125047.5| Mus musculus BAC clone RP23-354G14 from chromosome 3, complete sequence
          Length = 200566

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 419    aaaaaggaaactcaggcata 438
              ||||||||||||||||||||
Sbjct: 107181 aaaaaggaaactcaggcata 107200
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>gb|AC122336.4| Mus musculus BAC clone RP23-351K21 from chromosome 7, complete sequence
          Length = 189296

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 163   gagaaaaagggagggaacaa 182
             ||||||||||||||||||||
Sbjct: 64643 gagaaaaagggagggaacaa 64624
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>gb|AC126686.3| Mus musculus BAC clone RP23-148C24 from 18, complete sequence
          Length = 232817

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     caggatgagaaccatacagg 56
              ||||||||||||||||||||
Sbjct: 153824 caggatgagaaccatacagg 153843
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>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
          Length = 2575032

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 317    gcatgggtaactatgttccatataaatggaaa 348
              ||||||| |||| ||||||||||| |||||||
Sbjct: 610811 gcatggggaactctgttccatatatatggaaa 610780
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>emb|AL139109.14| Human DNA sequence from clone RP11-291O7 on chromosome X, complete
              sequence
          Length = 197536

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 156    ttctgctgagaaaaagggag 175
              ||||||||||||||||||||
Sbjct: 161102 ttctgctgagaaaaagggag 161083
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>emb|AL136381.12| Human DNA sequence from clone RP5-905H16 on chromosome 1p22.1-22.3
             Contains the 3' end of the PRKCL2 gene for protein kinase
             C-like 2 and a transcription elongation factor B (SIII)
             polypeptide 1 (15kDa, elongin C) (TCEB1) pseudogene,
             complete sequence
          Length = 131847

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   gaaaagaaaggtcaaaaaag 151
             ||||||||||||||||||||
Sbjct: 37087 gaaaagaaaggtcaaaaaag 37106
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>emb|AL663076.17| Mouse DNA sequence from clone RP23-6I12 on chromosome 11 Contains the 5'
              end of the gene for a novel protein (1700019F09Rik), the 5'
              end of the Stx8 gene for syntaxin 8, a pseudogene similar
              to part of glyceraldehyde-3-phosphate dehydrogenase (Gapd)
              and a ribosomal protein L31 (Rpl31) pseudogene, complete
              sequence
          Length = 206148

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 177    gaacaacagaagcaggaact 196
              ||||||||||||||||||||
Sbjct: 128551 gaacaacagaagcaggaact 128532
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>emb|AL627343.16| Mouse DNA sequence from clone RP23-382J14 on chromosome 11, complete
             sequence
          Length = 121496

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 171   gggagggaacaacagaagca 190
             ||||||||||||||||||||
Sbjct: 50656 gggagggaacaacagaagca 50637
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>emb|CR926468.3| Mouse DNA sequence from clone RP24-191A5 on chromosome 4, complete
             sequence
          Length = 129452

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 418   aaaaaaggaaactcaggcat 437
             ||||||||||||||||||||
Sbjct: 85667 aaaaaaggaaactcaggcat 85648
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>gb|AC149578.15| Medicago truncatula clone mth2-94f23, complete sequence
          Length = 119657

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 226   ataaacaagtatcagaacaacaaa 249
             |||||||||||||| |||||||||
Sbjct: 90693 ataaacaagtatcataacaacaaa 90670
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>dbj|AK137426.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:9630055K14
            product:unclassifiable, full insert sequence
          Length = 2569

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 419  aaaaaggaaactcaggcata 438
            ||||||||||||||||||||
Sbjct: 1778 aaaaaggaaactcaggcata 1797
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>gb|AC008610.7| Homo sapiens chromosome 5 clone CTB-129O4, complete sequence
          Length = 145242

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 414   gaacaaaaaaggaaactcag 433
             ||||||||||||||||||||
Sbjct: 46892 gaacaaaaaaggaaactcag 46911
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>gb|AC023058.17|AC023058 Homo sapiens 3 BAC CTB-187G23 (CalTech Human BAC Library B) complete
             sequence
          Length = 140966

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 238   cagaacaacaaagagaaggt 257
             ||||||||||||||||||||
Sbjct: 26038 cagaacaacaaagagaaggt 26019
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>gb|AC026172.3|AC026172 Homo sapiens chromosome 3 clone RP11-168L3 map 3p, complete sequence
          Length = 181598

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 238    cagaacaacaaagagaaggt 257
              ||||||||||||||||||||
Sbjct: 133615 cagaacaacaaagagaaggt 133596
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>emb|BX649549.14| Mouse DNA sequence from clone RP23-390D11 on chromosome 4, complete
           sequence
          Length = 151087

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 418 aaaaaaggaaactcaggcat 437
           ||||||||||||||||||||
Sbjct: 989 aaaaaaggaaactcaggcat 970
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>emb|AL929064.11| Mouse DNA sequence from clone RP23-442A7 on chromosome 2, complete
             sequence
          Length = 121402

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    agaggatctagcaatactac 118
             ||||||||||||||||||||
Sbjct: 20734 agaggatctagcaatactac 20753
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>emb|AL390816.4|CNS06C7V Human chromosome 14 DNA sequence BAC R-355I22 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 206413

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    ggagggaacaacagaagcag 191
              ||||||||||||||||||||
Sbjct: 105616 ggagggaacaacagaagcag 105635
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>gb|AC153792.4| Mus musculus BAC clone RP23-435D23 from 7, complete sequence
          Length = 224041

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    gagaaaaagggagggaacaa 182
              ||||||||||||||||||||
Sbjct: 139190 gagaaaaagggagggaacaa 139171
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>gb|AC004073.1|AC004073 Human Chromosome X, complete sequence
          Length = 79612

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 328   tatgttccatataaatggaa 347
             ||||||||||||||||||||
Sbjct: 11674 tatgttccatataaatggaa 11655
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>emb|AL513354.14| Mouse DNA sequence from clone RP23-150J22 on chromosome 15, complete
              sequence
          Length = 227073

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 415    aacaaaaaaggaaactcagg 434
              ||||||||||||||||||||
Sbjct: 128885 aacaaaaaaggaaactcagg 128866
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>gb|AC026194.4| Homo sapiens chromosome 3 clone RP11-45B16 map 3p, complete sequence
          Length = 181604

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 238    cagaacaacaaagagaaggt 257
              ||||||||||||||||||||
Sbjct: 133621 cagaacaacaaagagaaggt 133602
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>gb|AC018506.5| Homo sapiens chromosome 3 clone RP11-58B17 map 3p, complete sequence
          Length = 191575

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 238   cagaacaacaaagagaaggt 257
             ||||||||||||||||||||
Sbjct: 38487 cagaacaacaaagagaaggt 38468


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,995,177
Number of Sequences: 3902068
Number of extensions: 4995177
Number of successful extensions: 121775
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 121563
Number of HSP's gapped (non-prelim): 212
length of query: 475
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 453
effective length of database: 17,147,199,772
effective search space: 7767681496716
effective search space used: 7767681496716
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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