ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl30d11 |
|---|---|
| Clone Library Name | barley_pub |
>CESA1_ARATH (O48946) Cellulose synthase A catalytic subunit 1 [UDP-forming] (EC| 2.4.1.12) (AtCesA-1) (Radially swollen protein 1) (AtRSW1) Length = 1081 Score = 115 bits (289), Expect = 4e-26 Identities = 52/82 (63%), Positives = 61/82 (74%) Frame = +1 Query: 193 MATNRGMVAGSHKRNEFVMIRNDGDAPAPGKEVKGAGGQACQICGDTVGVSAAGDVFVAC 372 M + G+VAGS++RNE V IR++ D K +K GQ CQICGD VG++ GDVFVAC Sbjct: 1 MEASAGLVAGSYRRNELVRIRHESDGGT--KPLKNMNGQICQICGDDVGLAETGDVFVAC 58 Query: 373 NECAFPVCRPCYEYERKDGVHC 438 NECAFPVCRPCYEYERKDG C Sbjct: 59 NECAFPVCRPCYEYERKDGTQC 80
>CESA7_ARATH (Q9SWW6) Cellulose synthase A catalytic subunit 7 [UDP-forming] (EC| 2.4.1.12) (AtCesA-7) (Irregular xylem protein 3) (AtIRX3) Length = 1026 Score = 101 bits (252), Expect = 7e-22 Identities = 44/79 (55%), Positives = 56/79 (70%) Frame = +1 Query: 193 MATNRGMVAGSHKRNEFVMIRNDGDAPAPGKEVKGAGGQACQICGDTVGVSAAGDVFVAC 372 M + G+VAGSH RNE V+I N + K +K GQ C+ICGD +G++ GD+FVAC Sbjct: 1 MEASAGLVAGSHNRNELVVIHNHEEP----KPLKNLDGQFCEICGDQIGLTVEGDLFVAC 56 Query: 373 NECAFPVCRPCYEYERKDG 429 NEC FP CRPCYEYER++G Sbjct: 57 NECGFPACRPCYEYERREG 75
>CESA5_ARATH (Q8L778) Cellulose synthase A catalytic subunit 5 [UDP-forming] (EC| 2.4.1.12) (AtCesA-5) Length = 1069 Score = 100 bits (249), Expect = 2e-21 Identities = 46/79 (58%), Positives = 56/79 (70%) Frame = +1 Query: 193 MATNRGMVAGSHKRNEFVMIRNDGDAPAPGKEVKGAGGQACQICGDTVGVSAAGDVFVAC 372 M T ++AGSH RNEFV+I D A + V+ GQ CQICGD + +S G+ FVAC Sbjct: 1 MNTGGRLIAGSHNRNEFVLINADESARI--RSVEELSGQTCQICGDEIELSVDGESFVAC 58 Query: 373 NECAFPVCRPCYEYERKDG 429 NECAFPVCRPCYEYER++G Sbjct: 59 NECAFPVCRPCYEYERREG 77
>CESAA_ARATH (Q9SKJ5) Probable cellulose synthase A catalytic subunit 10| [UDP-forming] (EC 2.4.1.12) (AtCesA-10) (AtCesA-13) Length = 1065 Score = 99.8 bits (247), Expect = 3e-21 Identities = 46/76 (60%), Positives = 55/76 (72%) Frame = +1 Query: 211 MVAGSHKRNEFVMIRNDGDAPAPGKEVKGAGGQACQICGDTVGVSAAGDVFVACNECAFP 390 MVAGS++R EFV R+D D K +K GQ CQICGD VG++ G+VFVACNEC FP Sbjct: 1 MVAGSYRRYEFVRNRDDSDDGL--KPLKDLNGQICQICGDDVGLTKTGNVFVACNECGFP 58 Query: 391 VCRPCYEYERKDGVHC 438 +C+ CYEYERKDG C Sbjct: 59 LCQSCYEYERKDGSQC 74
>CESA2_ARATH (O48947) Cellulose synthase A catalytic subunit 2 [UDP-forming] (EC| 2.4.1.12) (AtCesA-2) (Ath-A) Length = 1084 Score = 99.4 bits (246), Expect = 4e-21 Identities = 44/79 (55%), Positives = 57/79 (72%) Frame = +1 Query: 193 MATNRGMVAGSHKRNEFVMIRNDGDAPAPGKEVKGAGGQACQICGDTVGVSAAGDVFVAC 372 M T ++AGSH RNEFV+I D A + V+ GQ CQICGD + ++ + ++FVAC Sbjct: 1 MNTGGRLIAGSHNRNEFVLINADESARI--RSVQELSGQTCQICGDEIELTVSSELFVAC 58 Query: 373 NECAFPVCRPCYEYERKDG 429 NECAFPVCRPCYEYER++G Sbjct: 59 NECAFPVCRPCYEYERREG 77
>CESA6_ARATH (Q94JQ6) Cellulose synthase A catalytic subunit 6 [UDP-forming] (EC| 2.4.1.12) (AtCesA-6) (Isoxaben resistant protein 2) (Protein PROCUSTE1) (Protein Quill) (AraxCelA) Length = 1084 Score = 96.7 bits (239), Expect = 2e-20 Identities = 44/79 (55%), Positives = 56/79 (70%) Frame = +1 Query: 193 MATNRGMVAGSHKRNEFVMIRNDGDAPAPGKEVKGAGGQACQICGDTVGVSAAGDVFVAC 372 M T ++AGSH RNEFV+I D +A + V+ GQ CQIC D + ++ G+ FVAC Sbjct: 1 MNTGGRLIAGSHNRNEFVLINADENARI--RSVQELSGQTCQICRDEIELTVDGEPFVAC 58 Query: 373 NECAFPVCRPCYEYERKDG 429 NECAFPVCRPCYEYER++G Sbjct: 59 NECAFPVCRPCYEYERREG 77
>CESA9_ARATH (Q9SJ22) Probable cellulose synthase A catalytic subunit 9| [UDP-forming] (EC 2.4.1.12) (AtCesA-9) Length = 1088 Score = 90.5 bits (223), Expect = 2e-18 Identities = 40/79 (50%), Positives = 53/79 (67%) Frame = +1 Query: 193 MATNRGMVAGSHKRNEFVMIRNDGDAPAPGKEVKGAGGQACQICGDTVGVSAAGDVFVAC 372 M T ++AGSH RNEFV+I D A + + GQ C+IC D + ++ G+ F+AC Sbjct: 1 MNTGGRLIAGSHNRNEFVLINADDTARI--RSAEELSGQTCKICRDEIELTDNGEPFIAC 58 Query: 373 NECAFPVCRPCYEYERKDG 429 NECAFP CRPCYEYER++G Sbjct: 59 NECAFPTCRPCYEYERREG 77
>CESA3_ARATH (Q941L0) Cellulose synthase A catalytic subunit 3 [UDP-forming] (EC| 2.4.1.12) (AtCesA-3) (Constitutive expression of VSP1 protein 1) (Isoxaben resistant protein 1) (Ath-B) Length = 1065 Score = 77.8 bits (190), Expect = 1e-14 Identities = 33/57 (57%), Positives = 39/57 (68%) Frame = +1 Query: 259 DGDAPAPGKEVKGAGGQACQICGDTVGVSAAGDVFVACNECAFPVCRPCYEYERKDG 429 + + GK +K Q CQIC D VG + GD FVAC+ C+FPVCRPCYEYERKDG Sbjct: 2 ESEGETAGKPMKNIVPQTCQICSDNVGKTVDGDRFVACDICSFPVCRPCYEYERKDG 58
>CESA4_ARATH (Q84JA6) Cellulose synthase A catalytic subunit 4 [UDP-forming] (EC| 2.4.1.12) (AtCesA-4) (Irregular xylem protein 5) (AtIRX5) Length = 1049 Score = 61.2 bits (147), Expect = 1e-09 Identities = 23/42 (54%), Positives = 29/42 (69%) Frame = +1 Query: 313 CQICGDTVGVSAAGDVFVACNECAFPVCRPCYEYERKDGVHC 438 C++CGD V G FVAC+ C +PVC+PCYEYER +G C Sbjct: 23 CKVCGDEVKDDDNGQTFVACHVCVYPVCKPCYEYERSNGNKC 64
>CESA8_ARATH (Q8LPK5) Cellulose synthase A catalytic subunit 8 [UDP-forming] (EC| 2.4.1.12) (AtCesA-8) (Irregular xylem protein 1) (AtIRX1) Length = 985 Score = 59.7 bits (143), Expect = 3e-09 Identities = 21/39 (53%), Positives = 30/39 (76%) Frame = +1 Query: 313 CQICGDTVGVSAAGDVFVACNECAFPVCRPCYEYERKDG 429 C CG+ +GV + G+ FVAC+EC+FP+C+ C EYE K+G Sbjct: 9 CNTCGEEIGVKSNGEFFVACHECSFPICKACLEYEFKEG 47
>RP3A_BOVIN (Q06846) Rabphilin-3A (Exophilin-1)| Length = 704 Score = 33.1 bits (74), Expect = 0.31 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = +1 Query: 283 KEVKGAGGQACQICGDTVGVSAAGDVFVACNECAFPVCRPC 405 K V G G C +CG+ +G+ G V C +C VC C Sbjct: 88 KNVAGDGVNRCILCGEQLGM--LGSACVVCEDCKKNVCTKC 126
>RP3A_MOUSE (P47708) Rabphilin-3A (Exophilin-1)| Length = 681 Score = 33.1 bits (74), Expect = 0.31 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = +1 Query: 283 KEVKGAGGQACQICGDTVGVSAAGDVFVACNECAFPVCRPC 405 K V G G C +CG+ +G+ G V C +C VC C Sbjct: 84 KNVAGDGVNRCILCGEQLGM--LGSACVVCEDCKKNVCTKC 122
>RP3A_HUMAN (Q9Y2J0) Rabphilin-3A (Exophilin-1)| Length = 694 Score = 33.1 bits (74), Expect = 0.31 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = +1 Query: 283 KEVKGAGGQACQICGDTVGVSAAGDVFVACNECAFPVCRPC 405 K V G G C +CG+ +G+ G V C +C VC C Sbjct: 88 KNVAGDGVNRCILCGEQLGM--LGSACVVCEDCKKNVCTKC 126
>RP3A_RAT (P47709) Rabphilin-3A (Exophilin-1)| Length = 684 Score = 33.1 bits (74), Expect = 0.31 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = +1 Query: 283 KEVKGAGGQACQICGDTVGVSAAGDVFVACNECAFPVCRPC 405 K V G G C +CG+ +G+ G V C +C VC C Sbjct: 84 KNVAGDGVNRCILCGEQLGM--LGSACVVCEDCKKNVCTKC 122 Score = 28.5 bits (62), Expect = 7.7 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = -1 Query: 386 KAHSLQATKTSPAAETPTVSPHIWQA*PPAPFTSLPGAGASP 261 +A+S+QA++ +PA+ P Q PP + PG G P Sbjct: 271 RANSVQASRPAPASMPSPAPPQPVQPGPPGGSRAAPGPGRFP 312
>TRI56_HUMAN (Q9BRZ2) Tripartite motif protein 56 (RING finger protein 109)| Length = 755 Score = 32.0 bits (71), Expect = 0.70 Identities = 14/41 (34%), Positives = 19/41 (46%) Frame = +1 Query: 298 AGGQACQICGDTVGVSAAGDVFVACNECAFPVCRPCYEYER 420 AG AC +C G S G C +CA +C+ C + R Sbjct: 96 AGKPACALCPLVGGTSTGGPATARCLDCADDLCQACADGHR 136
>JHD2A_CHICK (Q5ZIX8) JmjC domain-containing histone demethylation protein 2A| (EC 1.14.11.-) (Jumonji domain-containing protein 1A) Length = 1325 Score = 30.4 bits (67), Expect = 2.0 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = +1 Query: 307 QACQICGDTVGVSAAGDVFVACNECAFPVCRPCYEYERKDGVH 435 + C +C T+ ++ C++C F VC CY RK G+H Sbjct: 667 EMCDVCDTTIF-----NLRWVCSKCGFGVCVDCYRM-RKKGIH 703
>HEM1_XYLFT (Q87A18) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)| Length = 432 Score = 30.4 bits (67), Expect = 2.0 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 7/65 (10%) Frame = -3 Query: 378 LVAGNKDITSGRNANGITTYLA-GLTTRAFHLLTRGGRVAVVADHDELVAFV------RP 220 L + + +GR A + LA GLT R H T R A +A++ ELV +P Sbjct: 352 LTRARRQLANGRPAEEVLEQLAHGLTNRLLHPPTAALREAALANNTELVRAAEQLFPEKP 411 Query: 219 GDHPP 205 G H P Sbjct: 412 GYHHP 416
>HEM1_XYLFA (Q9PA72) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)| Length = 432 Score = 30.0 bits (66), Expect = 2.7 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 7/65 (10%) Frame = -3 Query: 378 LVAGNKDITSGRNANGITTYLA-GLTTRAFHLLTRGGRVAVVADHDELVAFV------RP 220 L + + +GR A + LA GLT R H T R A +A++ ELV +P Sbjct: 352 LTRARQQLANGRPAEEVLEQLAHGLTNRLLHPPTAALREAALANNTELVRAAEQLFPEKP 411 Query: 219 GDHPP 205 G H P Sbjct: 412 GYHHP 416
>FPG_DESVH (Q726D5) Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)| (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (EC 4.2.99.18) (AP lyase mutM) Length = 364 Score = 29.6 bits (65), Expect = 3.5 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%) Frame = +1 Query: 289 VKGAGGQACQICGDTVGVS-AAGDVFVACNEC 381 V G GGQ C+ CG T+ + AG V C +C Sbjct: 331 VYGRGGQPCRHCGTTLATAQVAGRTTVFCPQC 362
>MA1A1_PIG (O02773) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA (EC| 3.2.1.113) (Processing alpha-1,2-mannosidase IA) (Alpha-1,2-mannosidase IA) (Mannosidase alpha class 1A member 1) (Man(9)-alpha-mannosidase) (Man9-mannosidase) Length = 659 Score = 29.6 bits (65), Expect = 3.5 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = -3 Query: 207 PVGGHLPAFTRPTGGGL 157 PVGG LP F+ P GGGL Sbjct: 2 PVGGLLPLFSSPAGGGL 18
>JHD2A_RAT (Q63679) JmjC domain-containing histone demethylation protein 2A| (EC 1.14.11.-) (Jumonji domain-containing protein 1A) (Testis-specific gene A protein) (Zinc-finger protein TSGA) Length = 1214 Score = 29.6 bits (65), Expect = 3.5 Identities = 15/48 (31%), Positives = 23/48 (47%) Frame = +1 Query: 283 KEVKGAGGQACQICGDTVGVSAAGDVFVACNECAFPVCRPCYEYERKD 426 + VKG + C +C T+ ++ C C F VC CY +RK+ Sbjct: 537 RAVKGVR-EMCDVCDTTIF-----NLHWVCPRCGFGVCVDCYRLKRKN 578
>JHD2A_MOUSE (Q6PCM1) JmjC domain-containing histone demethylation protein 2A| (EC 1.14.11.-) (Jumonji domain-containing protein 1A) Length = 1323 Score = 29.6 bits (65), Expect = 3.5 Identities = 15/48 (31%), Positives = 23/48 (47%) Frame = +1 Query: 283 KEVKGAGGQACQICGDTVGVSAAGDVFVACNECAFPVCRPCYEYERKD 426 + VKG + C +C T+ ++ C C F VC CY +RK+ Sbjct: 653 RAVKGVR-EMCDVCDTTIF-----NLHWVCPRCGFGVCVDCYRMKRKN 694
>JHD2A_HUMAN (Q9Y4C1) JmjC domain-containing histone demethylation protein 2A| (EC 1.14.11.-) (Jumonji domain-containing protein 1A) Length = 1321 Score = 29.6 bits (65), Expect = 3.5 Identities = 15/48 (31%), Positives = 23/48 (47%) Frame = +1 Query: 283 KEVKGAGGQACQICGDTVGVSAAGDVFVACNECAFPVCRPCYEYERKD 426 + VKG + C +C T+ ++ C C F VC CY +RK+ Sbjct: 653 RAVKGVR-EMCDVCDTTIF-----NLHWVCPRCGFGVCVDCYRMKRKN 694
>WC1_NEUCR (Q01371) White collar 1 protein (WC1)| Length = 1167 Score = 29.6 bits (65), Expect = 3.5 Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = -1 Query: 392 TGKAHSLQATKTSPAAETPTVSPHIWQA*PPAPFTSLP-GAGASPSLRIMTNS 237 T ++ SL AT T P P + A PAPFTS P G GAS + I + S Sbjct: 312 TFQSPSLSAT-TQTIRIGPPPPPSVTNAPTPAPFTSTPSGGGASQTKSIYSKS 363
>NAF1_HUMAN (Q15025) Nef-associated factor 1 (Naf1) (TNFAIP3-interacting| protein 1) (HIV-1 Nef-interacting protein) (Virion-associated nuclear shuttling protein) (VAN) (hVAN) (Nip40-1) Length = 636 Score = 29.3 bits (64), Expect = 4.5 Identities = 18/63 (28%), Positives = 28/63 (44%) Frame = -1 Query: 431 TPSLRSYS*QGRQTGKAHSLQATKTSPAAETPTVSPHIWQA*PPAPFTSLPGAGASPSLR 252 +PSL S+ TGK ++ A+ T+PA + PAP P +G S Sbjct: 77 SPSLGSFDPLAELTGKDSNVTASPTAPACPSD----------KPAPVQKPPSSGTSSEFE 126 Query: 251 IMT 243 ++T Sbjct: 127 VVT 129
>RPOD_SULTO (Q96YW0) DNA-directed RNA polymerase subunit D (EC 2.7.7.6)| Length = 264 Score = 29.3 bits (64), Expect = 4.5 Identities = 17/46 (36%), Positives = 24/46 (52%) Frame = +1 Query: 277 PGKEVKGAGGQACQICGDTVGVSAAGDVFVACNECAFPVCRPCYEY 414 P EVKG +A ++C + V G +FV NE A +C C +Y Sbjct: 169 PHVEVKGNCEKAFEVCPEGVFGMENGKLFVK-NEVACTLCEECIKY 213
>MA1A1_MOUSE (P45700) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA (EC| 3.2.1.113) (Processing alpha-1,2-mannosidase IA) (Alpha-1,2-mannosidase IA) (Mannosidase alpha class 1A member 1) (Man(9)-alpha-mannosidase) (Man9-mannosidase) Length = 655 Score = 28.9 bits (63), Expect = 5.9 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = -3 Query: 207 PVGGHLPAFTRPTGGGL 157 PVGG LP F+ P GGGL Sbjct: 2 PVGGLLPLFSSPGGGGL 18
>DOIAD_STRRY (Q2MFP3) 2-deoxy-scyllo-inosamine dehydrogenase (EC 1.1.1.-) (DOIA| dehydrogenase) Length = 339 Score = 28.5 bits (62), Expect = 7.7 Identities = 14/35 (40%), Positives = 17/35 (48%) Frame = +1 Query: 277 PGKEVKGAGGQACQICGDTVGVSAAGDVFVACNEC 381 PG E G +A D VG + GD+ VAC C Sbjct: 57 PGHEWSGTVVEAGGGAADLVGQNVVGDLTVACGSC 91
>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (VMW118 protein)| Length = 825 Score = 28.5 bits (62), Expect = 7.7 Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 1/49 (2%) Frame = +1 Query: 262 GDAPAPGKEVK-GAGGQACQICGDTVGVSAAGDVFVACNECAFPVCRPC 405 G P +E + G GG C +C D + F C P C PC Sbjct: 108 GGGPVGEEEAEAGGGGDVCAVCTDEIAPPLRCQSF----PCLHPFCIPC 152
>KLF6_RAT (O35819) Krueppel-like factor 6 (Core promoter element-binding| protein) (Transcription factor Zf9) Length = 283 Score = 28.5 bits (62), Expect = 7.7 Identities = 17/49 (34%), Positives = 22/49 (44%) Frame = +1 Query: 262 GDAPAPGKEVKGAGGQACQICGDTVGVSAAGDVFVACNECAFPVCRPCY 408 GD P+PGK G G++ GD A+ D + C F CR Y Sbjct: 167 GDLPSPGKVRSGTSGKS----GDKGSGDASPDGRRRVHRCHFNGCRKVY 211
>KLF6_MOUSE (O08584) Krueppel-like factor 6 (Core promoter element-binding| protein) Length = 283 Score = 28.5 bits (62), Expect = 7.7 Identities = 17/49 (34%), Positives = 22/49 (44%) Frame = +1 Query: 262 GDAPAPGKEVKGAGGQACQICGDTVGVSAAGDVFVACNECAFPVCRPCY 408 GD P+PGK G G++ GD A+ D + C F CR Y Sbjct: 167 GDLPSPGKVRSGTSGKS----GDKGNGDASPDGRRRVHRCHFNGCRKVY 211
>ANK3_HUMAN (Q12955) Ankyrin-3 (ANK-3) (Ankyrin-G)| Length = 4377 Score = 28.5 bits (62), Expect = 7.7 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Frame = -1 Query: 389 GKAHSLQATKTSPAAETPTVSP--HIWQA*PPAPFTSLPGAGASPSLRIMTN 240 G A S + +S ++ TP+ SP IW P+P S GA + S++ +++ Sbjct: 1515 GPAKSGFTSLSSSSSNTPSASPLKSIWSVSTPSPIKSTLGASTTSSVKSISD 1566
>CF015_HUMAN (Q6UXA7) Protein C6orf15 precursor (STG protein)| Length = 325 Score = 28.5 bits (62), Expect = 7.7 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +2 Query: 125 LPVPLSTEASERPPPVGRVKAGRWPPTGG 211 +P+ LS S+ PP G RWPP+ G Sbjct: 75 VPLKLSVPPSDGFPPAGGSAVQRWPPSWG 103
>UBP2_ARATH (Q8W4N3) Ubiquitin carboxyl-terminal hydrolase 2 (EC 3.1.2.15)| (Ubiquitin thioesterase 2) (Ubiquitin-specific-processing protease 2) (Deubiquitinating enzyme 2) (AtUBP2) Length = 961 Score = 28.5 bits (62), Expect = 7.7 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = +2 Query: 125 LPVPLSTEASERPPPVGRVKAGRWPP 202 LPVP ++P PV R K + PP Sbjct: 383 LPVPFKKSPPKKPQPVSRAKKAKLPP 408 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,725,005 Number of Sequences: 219361 Number of extensions: 919578 Number of successful extensions: 3747 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 3424 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3733 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2628831825 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
