ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl30d11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY483155.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA6) mRNA, complete cds Length = 3745 Score = 599 bits (302), Expect = e-168 Identities = 326/334 (97%) Strand = Plus / Plus Query: 107 cgccggatctagagcggccttcccgtgcccctctcgactgaagcgagcgagaggccgccg 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118 cgccggatctagagcggccttcccgtgcccctctcgactgaagcgagcgagaggccgccg 177 Query: 167 ccggtggggcgtgtgaaggcggggagatggccaccaaccgggggatggtcgccgggtcgc 226 |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 178 ccggtggggcgtgtgagggcggggagatggcggccaaccgggggatggtcgccgggtcgc 237 Query: 227 acaaacgcaacgagttcgtcatgatccgcaacgacggcgacgcgcccgccccgggtaagg 286 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 acaaccgcaacgagttcgtcatgatccgcaacgacggcgacgcgcccgccccgggtaagg 297 Query: 287 aggtgaaaggcgcgggtggtcaggcctgccagatatgtggtgataccgttggcgtttcgg 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 298 aggtgaaaggcgcgggtggtcaggcctgccagatatgtggtgataccgttggcgtttcgg 357 Query: 347 ccgctggtgatgtctttgttgcctgcaacgagtgcgccttcccagtctgccgcccttgct 406 || |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 358 ccactggtgatgtctttgtcgcctgcaacgagtgcgccttcccggtctgccgcccttgct 417 Query: 407 acgagtacgagcgcaaggatggggtccattgctg 440 |||||||||||||||||||||||||||| ||||| Sbjct: 418 acgagtacgagcgcaaggatggggtccaatgctg 451 Score = 151 bits (76), Expect = 2e-33 Identities = 76/76 (100%) Strand = Plus / Plus Query: 12 gagctccgagagtagttcttctccctctcgagagccagctcgcgggggatctgggaatgg 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23 gagctccgagagtagttcttctccctctcgagagccagctcgcgggggatctgggaatgg 82 Query: 72 tgcccatctccgccga 87 |||||||||||||||| Sbjct: 83 tgcccatctccgccga 98
>gb|DQ020208.1| Bambusa oldhamii cellulose synthase BoCesA1b mRNA, complete cds Length = 3453 Score = 196 bits (99), Expect = 4e-47 Identities = 177/203 (87%) Strand = Plus / Plus Query: 223 tcgcacaaacgcaacgagttcgtcatgatccgcaacgacggcgacgcgcccgccccgggt 282 |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct: 204 tcgcacaaccgcaacgagttcgtcatgatccgccacgacggcgacgcgcccgccccggct 263 Query: 283 aaggaggtgaaaggcgcgggtggtcaggcctgccagatatgtggtgataccgttggcgtt 342 ||| | ||| | | | ||| |||| ||||||||||||||| || || |||||||| Sbjct: 264 aagccgacgaagagtgtgaatgggcaggtctgccagatatgtggcgacactgttggcgtc 323 Query: 343 tcggccgctggtgatgtctttgttgcctgcaacgagtgcgccttcccagtctgccgccct 402 ||||| |||| |||||||||||||| ||||| |||||||||||||| |||||||||||| Sbjct: 324 tcggctactggcgatgtctttgttgcttgcaatgagtgcgccttcccggtctgccgccct 383 Query: 403 tgctacgagtacgagcgcaagga 425 ||||| ||||||||||||||||| Sbjct: 384 tgctatgagtacgagcgcaagga 406
>gb|AF200526.1|AF200526 Zea mays cellulose synthase-2 (CesA-2) mRNA, complete cds Length = 3725 Score = 192 bits (97), Expect = 7e-46 Identities = 202/237 (85%) Strand = Plus / Plus Query: 189 ggagatggccaccaaccgggggatggtcgccgggtcgcacaaacgcaacgagttcgtcat 248 ||||||||| ||||| ||||||||| || || || ||||| ||||||||||||||||| Sbjct: 175 ggagatggcggccaacaaggggatggtggcaggctctcacaaccgcaacgagttcgtcat 234 Query: 249 gatccgcaacgacggcgacgcgcccgccccgggtaaggaggtgaaaggcgcgggtggtca 308 ||||||| |||||||||||||||| | ||||| |||| ||| | ||| ||| || Sbjct: 235 gatccgccacgacggcgacgcgcctgtcccggctaagcccacgaagagtgcgaatgggca 294 Query: 309 ggcctgccagatatgtggtgataccgttggcgtttcggccgctggtgatgtctttgttgc 368 || ||||||||| ||||| || || ||||||||||| ||| ||||||||||||||||||| Sbjct: 295 ggtctgccagatttgtggcgacactgttggcgtttcagccactggtgatgtctttgttgc 354 Query: 369 ctgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgcaagga 425 |||||| ||||| |||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 355 ctgcaatgagtgtgccttccctgtctgccgcccttgctatgagtacgagcgcaagga 411
>gb|DQ020207.1| Bambusa oldhamii cellulose synthase BoCesA1a mRNA, complete cds Length = 3547 Score = 188 bits (95), Expect = 1e-44 Identities = 188/219 (85%) Strand = Plus / Plus Query: 207 ggggatggtcgccgggtcgcacaaacgcaacgagttcgtcatgatccgcaacgacggcga 266 ||||||||| || || || | ||| |||||||||||||||||||||||| |||||||||| Sbjct: 31 ggggatggtggcgggctcacgcaaccgcaacgagttcgtcatgatccgccacgacggcga 90 Query: 267 cgcgcccgccccgggtaaggaggtgaaaggcgcgggtggtcaggcctgccagatatgtgg 326 |||||||||||||| |||| | |||| | | | || |||| ||||||||||||||| Sbjct: 91 cgcgcccgccccggctaagccgccgaaaagtgtgaatgtgcaggtctgccagatatgtgg 150 Query: 327 tgataccgttggcgtttcggccgctggtgatgtctttgttgcctgcaacgagtgcgcctt 386 || || |||||||| || ||| | || |||||||||||||||||||| ||||||||||| Sbjct: 151 cgacactgttggcgtctcagccaccggcgatgtctttgttgcctgcaatgagtgcgcctt 210 Query: 387 cccagtctgccgcccttgctacgagtacgagcgcaagga 425 ||| ||||||||||||||||| ||||||||||||||||| Sbjct: 211 cccggtctgccgcccttgctatgagtacgagcgcaagga 249
>gb|AY110415.1| Zea mays CL1166_1 mRNA sequence Length = 3898 Score = 176 bits (89), Expect = 4e-41 Identities = 200/237 (84%) Strand = Plus / Plus Query: 189 ggagatggccaccaaccgggggatggtcgccgggtcgcacaaacgcaacgagttcgtcat 248 ||||||||| ||||| ||||||||| || || |||||||| ||||||||||||||||| Sbjct: 185 ggagatggcggccaacaaggggatggtggcgggctcgcacaaccgcaacgagttcgtcat 244 Query: 249 gatccgcaacgacggcgacgcgcccgccccgggtaaggaggtgaaaggcgcgggtggtca 308 ||||||| |||||||||||||||| | ||||| |||| ||| | ||| ||| || Sbjct: 245 gatccgccacgacggcgacgcgccgggcccggctaagcccacgaagagtgcgaatgggca 304 Query: 309 ggcctgccagatatgtggtgataccgttggcgtttcggccgctggtgatgtctttgttgc 368 || ||||||||| || || || | || |||||||| ||| ||||||||||||||||||| Sbjct: 305 ggtctgccagatttgcggcgactctgtgggcgtttcagccactggtgatgtctttgttgc 364 Query: 369 ctgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgcaagga 425 |||||| ||||| |||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 365 ctgcaatgagtgtgccttccctgtctgccgcccttgctatgagtacgagcgcaagga 421
>gb|AC135426.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617A08, complete sequence Length = 144781 Score = 149 bits (75), Expect = 9e-33 Identities = 111/123 (90%) Strand = Plus / Minus Query: 303 tggtcaggcctgccagatatgtggtgataccgttggcgtttcggccgctggtgatgtctt 362 |||||||| ||||||||| ||||| || || |||||||| |||||| | || || ||||| Sbjct: 133058 tggtcaggtctgccagatttgtggcgacactgttggcgtctcggccaccggcgacgtctt 132999 Query: 363 tgttgcctgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgcaa 422 |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 132998 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaa 132939 Query: 423 gga 425 ||| Sbjct: 132938 gga 132936 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 235 aacgagttcgtcatgatccgcaacgacggcgacgcgcc 272 ||||||||||||||||||||| ||||||||||||||| Sbjct: 133695 aacgagttcgtcatgatccgccccgacggcgacgcgcc 133658
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 149 bits (75), Expect = 9e-33 Identities = 111/123 (90%) Strand = Plus / Minus Query: 303 tggtcaggcctgccagatatgtggtgataccgttggcgtttcggccgctggtgatgtctt 362 |||||||| ||||||||| ||||| || || |||||||| |||||| | || || ||||| Sbjct: 21901 tggtcaggtctgccagatttgtggcgacactgttggcgtctcggccaccggcgacgtctt 21842 Query: 363 tgttgcctgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgcaa 422 |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 21841 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaa 21782 Query: 423 gga 425 ||| Sbjct: 21781 gga 21779 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 235 aacgagttcgtcatgatccgcaacgacggcgacgcgcc 272 ||||||||||||||||||||| ||||||||||||||| Sbjct: 22538 aacgagttcgtcatgatccgccccgacggcgacgcgcc 22501
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 149 bits (75), Expect = 9e-33 Identities = 111/123 (90%) Strand = Plus / Minus Query: 303 tggtcaggcctgccagatatgtggtgataccgttggcgtttcggccgctggtgatgtctt 362 |||||||| ||||||||| ||||| || || |||||||| |||||| | || || ||||| Sbjct: 4511434 tggtcaggtctgccagatttgtggcgacactgttggcgtctcggccaccggcgacgtctt 4511375 Query: 363 tgttgcctgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgcaa 422 |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 4511374 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaa 4511315 Query: 423 gga 425 ||| Sbjct: 4511314 gga 4511312 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 235 aacgagttcgtcatgatccgcaacgacggcgacgcgcc 272 ||||||||||||||||||||| ||||||||||||||| Sbjct: 4512071 aacgagttcgtcatgatccgccccgacggcgacgcgcc 4512034
>dbj|AK102140.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085K01, full insert sequence Length = 3768 Score = 149 bits (75), Expect = 9e-33 Identities = 111/123 (90%) Strand = Plus / Plus Query: 303 tggtcaggcctgccagatatgtggtgataccgttggcgtttcggccgctggtgatgtctt 362 |||||||| ||||||||| ||||| || || |||||||| |||||| | || || ||||| Sbjct: 297 tggtcaggtctgccagatttgtggcgacactgttggcgtctcggccaccggcgacgtctt 356 Query: 363 tgttgcctgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgcaa 422 |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 357 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaa 416 Query: 423 gga 425 ||| Sbjct: 417 gga 419 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 235 aacgagttcgtcatgatccgcaacgacggcgacgcgcc 272 ||||||||||||||||||||| ||||||||||||||| Sbjct: 229 aacgagttcgtcatgatccgccccgacggcgacgcgcc 266
>dbj|AK100188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034D20, full insert sequence Length = 3897 Score = 149 bits (75), Expect = 9e-33 Identities = 111/123 (90%) Strand = Plus / Plus Query: 303 tggtcaggcctgccagatatgtggtgataccgttggcgtttcggccgctggtgatgtctt 362 |||||||| ||||||||| ||||| || || |||||||| |||||| | || || ||||| Sbjct: 297 tggtcaggtctgccagatttgtggcgacactgttggcgtctcggccaccggcgacgtctt 356 Query: 363 tgttgcctgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgcaa 422 |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 357 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaa 416 Query: 423 gga 425 ||| Sbjct: 417 gga 419 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 235 aacgagttcgtcatgatccgcaacgacggcgacgcgcc 272 ||||||||||||||||||||| ||||||||||||||| Sbjct: 229 aacgagttcgtcatgatccgccccgacggcgacgcgcc 266
>dbj|AK099281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125F05, full insert sequence Length = 3801 Score = 149 bits (75), Expect = 9e-33 Identities = 111/123 (90%) Strand = Plus / Plus Query: 303 tggtcaggcctgccagatatgtggtgataccgttggcgtttcggccgctggtgatgtctt 362 |||||||| ||||||||| ||||| || || |||||||| |||||| | || || ||||| Sbjct: 297 tggtcaggtctgccagatttgtggcgacactgttggcgtctcggccaccggcgacgtctt 356 Query: 363 tgttgcctgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgcaa 422 |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 357 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaa 416 Query: 423 gga 425 ||| Sbjct: 417 gga 419 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 235 aacgagttcgtcatgatccgcaacgacggcgacgcgcc 272 ||||||||||||||||||||| ||||||||||||||| Sbjct: 229 aacgagttcgtcatgatccgccccgacggcgacgcgcc 266
>dbj|AK099228.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091P03, full insert sequence Length = 3732 Score = 149 bits (75), Expect = 9e-33 Identities = 111/123 (90%) Strand = Plus / Plus Query: 303 tggtcaggcctgccagatatgtggtgataccgttggcgtttcggccgctggtgatgtctt 362 |||||||| ||||||||| ||||| || || |||||||| |||||| | || || ||||| Sbjct: 297 tggtcaggtctgccagatttgtggcgacactgttggcgtctcggccaccggcgacgtctt 356 Query: 363 tgttgcctgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgcaa 422 |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 357 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaa 416 Query: 423 gga 425 ||| Sbjct: 417 gga 419 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 235 aacgagttcgtcatgatccgcaacgacggcgacgcgcc 272 ||||||||||||||||||||| ||||||||||||||| Sbjct: 229 aacgagttcgtcatgatccgccccgacggcgacgcgcc 266
>dbj|AK098978.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092B06, full insert sequence Length = 3764 Score = 149 bits (75), Expect = 9e-33 Identities = 111/123 (90%) Strand = Plus / Plus Query: 303 tggtcaggcctgccagatatgtggtgataccgttggcgtttcggccgctggtgatgtctt 362 |||||||| ||||||||| ||||| || || |||||||| |||||| | || || ||||| Sbjct: 297 tggtcaggtctgccagatttgtggcgacactgttggcgtctcggccaccggcgacgtctt 356 Query: 363 tgttgcctgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgcaa 422 |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 357 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaa 416 Query: 423 gga 425 ||| Sbjct: 417 gga 419 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 235 aacgagttcgtcatgatccgcaacgacggcgacgcgcc 272 ||||||||||||||||| ||| ||||||||||||||| Sbjct: 229 aacgagttcgtcatgattcgccccgacggcgacgcgcc 266
>dbj|AK067967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013125H24, full insert sequence Length = 3802 Score = 149 bits (75), Expect = 9e-33 Identities = 111/123 (90%) Strand = Plus / Plus Query: 303 tggtcaggcctgccagatatgtggtgataccgttggcgtttcggccgctggtgatgtctt 362 |||||||| ||||||||| ||||| || || |||||||| |||||| | || || ||||| Sbjct: 297 tggtcaggtctgccagatttgtggcgacactgttggcgtctcggccaccggcgacgtctt 356 Query: 363 tgttgcctgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgcaa 422 |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 357 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaa 416 Query: 423 gga 425 ||| Sbjct: 417 gga 419 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 235 aacgagttcgtcatgatccgcaacgacggcgacgcgcc 272 ||||||||||||||||||||| ||||||||||||||| Sbjct: 229 aacgagttcgtcatgatccgccccgacggcgacgcgcc 266
>dbj|AK067850.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123A09, full insert sequence Length = 1444 Score = 149 bits (75), Expect = 9e-33 Identities = 111/123 (90%) Strand = Plus / Plus Query: 303 tggtcaggcctgccagatatgtggtgataccgttggcgtttcggccgctggtgatgtctt 362 |||||||| ||||||||| ||||| || || |||||||| |||||| | || || ||||| Sbjct: 300 tggtcaggtctgccagatttgtggcgacactgttggcgtctcggccaccggcgacgtctt 359 Query: 363 tgttgcctgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgcaa 422 |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 360 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaa 419 Query: 423 gga 425 ||| Sbjct: 420 gga 422 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 235 aacgagttcgtcatgatccgcaacgacggcgacgcgcc 272 ||||||||||||||||||||| ||||||||||||||| Sbjct: 232 aacgagttcgtcatgatccgccccgacggcgacgcgcc 269
>gb|AF030052.1|AF030052 Oryza sativa subsp. japonica RSW1-like cellulose synthase catalytic subunit mRNA, partial cds Length = 1838 Score = 149 bits (75), Expect = 9e-33 Identities = 111/123 (90%) Strand = Plus / Plus Query: 303 tggtcaggcctgccagatatgtggtgataccgttggcgtttcggccgctggtgatgtctt 362 |||||||| ||||||||| ||||| || || |||||||| |||||| | || || ||||| Sbjct: 200 tggtcaggtctgccagatttgtggcgacactgttggcgtctcggccaccggcgacgtctt 259 Query: 363 tgttgcctgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgcaa 422 |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 260 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaa 319 Query: 423 gga 425 ||| Sbjct: 320 gga 322 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 235 aacgagttcgtcatgatccgcaacgacggcgacgcgcc 272 ||||||||||||||||||||| ||||||||||||||| Sbjct: 132 aacgagttcgtcatgatccgccccgacggcgacgcgcc 169
>gb|AF200525.1|AF200525 Zea mays cellulose synthase-1 (CesA-1) mRNA, complete cds Length = 3752 Score = 109 bits (55), Expect = 8e-21 Identities = 103/119 (86%) Strand = Plus / Plus Query: 307 caggcctgccagatatgtggtgataccgttggcgtttcggccgctggtgatgtctttgtt 366 |||| ||||||||| || ||||| | || || ||||| ||| ||||||||||||||||| Sbjct: 297 caggtctgccagatttgcggtgactctgtgggtgtttcagccactggtgatgtctttgtt 356 Query: 367 gcctgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgcaagga 425 |||||||| ||||| |||||||| ||||||||||| ||||| ||||| ||||||||||| Sbjct: 357 gcctgcaatgagtgtgccttccctgtctgccgcccatgctatgagtatgagcgcaagga 415 Score = 83.8 bits (42), Expect = 4e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 189 ggagatggccaccaaccgggggatggtcgccgggtcgcacaaacgcaacgagttcgtcat 248 ||||||||| ||||| ||||||||| || || |||||||| ||||||||||||||||| Sbjct: 179 ggagatggcggccaacaaggggatggtggcgggctcgcacaaccgcaacgagttcgtcat 238 Query: 249 gatccgcaacgacggcga 266 ||||||| |||||||||| Sbjct: 239 gatccgccacgacggcga 256
>gb|DQ020209.1| Bambusa oldhamii cellulose synthase BoCesA2 mRNA, complete cds Length = 3648 Score = 95.6 bits (48), Expect = 1e-16 Identities = 66/72 (91%) Strand = Plus / Plus Query: 358 gtctttgttgcctgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgag 417 |||||||| |||||||||||||| ||||||||||| || || |||||||||||||| ||| Sbjct: 260 gtctttgtcgcctgcaacgagtgtgccttcccagtttgtcggccttgctacgagtatgag 319 Query: 418 cgcaaggatggg 429 |||||||||||| Sbjct: 320 cgcaaggatggg 331
>gb|DQ020216.1| Bambusa oldhamii cellulose synthase BoCesA3b mRNA, complete cds Length = 3707 Score = 89.7 bits (45), Expect = 7e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 341 tttcggccgctggtgatgtctttgttgcctgcaacgagtgcgccttcccagtctgccgcc 400 |||| ||| |||| ||||||||||| |||||||| ||||| ||||||||||| || || | Sbjct: 225 tttcagccactggcgatgtctttgtcgcctgcaatgagtgtgccttcccagtttgtcggc 284 Query: 401 cttgctacgagtacgagcgcaaggatggg 429 ||||||| ||||| ||||||||||||||| Sbjct: 285 cttgctatgagtatgagcgcaaggatggg 313
>gb|DQ020210.1| Bambusa oldhamii cellulose synthase BoCesA3a mRNA, complete cds Length = 3571 Score = 87.7 bits (44), Expect = 3e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 350 ctggtgatgtctttgttgcctgcaacgagtgcgccttcccagtctgccgcccttgctacg 409 |||| ||||||||||| |||||||| ||||| ||||||||||| || || |||||||| | Sbjct: 225 ctggcgatgtctttgtcgcctgcaatgagtgtgccttcccagtttgtcggccttgctatg 284 Query: 410 agtacgagcgcaaggatggg 429 |||| ||||||||||||||| Sbjct: 285 agtatgagcgcaaggatggg 304
>gb|AF200532.1|AF200532 Zea mays cellulose synthase-8 (CesA-8) mRNA, complete cds Length = 3812 Score = 77.8 bits (39), Expect = 3e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 370 tgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgc 420 |||||||||||||||||||| ||||||||| | |||||||||||||||||| Sbjct: 391 tgcaacgagtgcgccttccccgtctgccgcgcctgctacgagtacgagcgc 441
>gb|AY103701.1| Zea mays PCO120363 mRNA sequence Length = 3788 Score = 77.8 bits (39), Expect = 3e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 370 tgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgc 420 |||||||||||||||||||| ||||||||| | |||||||||||||||||| Sbjct: 378 tgcaacgagtgcgccttccccgtctgccgcgcctgctacgagtacgagcgc 428
>ref|XM_470347.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3905 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 367 gcctgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgc 420 ||||||||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 169 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgc 222
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 367 gcctgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgc 420 ||||||||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 34874301 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgc 34874354 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 385 ttcccagtctgccgcccttgctacgagtacgagcgcaagga 425 ||||| || ||||| || ||||||||||||||||||||||| Sbjct: 33481822 ttcccggtgtgccggccatgctacgagtacgagcgcaagga 33481782
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 367 gcctgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgc 420 |||||||||||||||| |||||| || |||||||| |||||||||||||||||| Sbjct: 15226924 gcctgcaacgagtgcggcttcccggtgtgccgcccctgctacgagtacgagcgc 15226977
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 367 gcctgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgc 420 ||||||||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 34964373 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgc 34964426 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 385 ttcccagtctgccgcccttgctacgagtacgagcgcaagga 425 ||||| || ||||| || ||||||||||||||||||||||| Sbjct: 33572332 ttcccggtgtgccggccatgctacgagtacgagcgcaagga 33572292
>gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genomic sequence, complete sequence Length = 171376 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 367 gcctgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgc 420 ||||||||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 141179 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgc 141126
>dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1740_D06 Length = 187410 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 367 gcctgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgc 420 |||||||||||||||| |||||| || |||||||| |||||||||||||||||| Sbjct: 120900 gcctgcaacgagtgcggcttcccggtgtgccgcccctgctacgagtacgagcgc 120953
>dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0418B08 Length = 165909 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 367 gcctgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgc 420 |||||||||||||||| |||||| || |||||||| |||||||||||||||||| Sbjct: 6113 gcctgcaacgagtgcggcttcccggtgtgccgcccctgctacgagtacgagcgc 6166
>dbj|AK121170.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081B08, full insert sequence Length = 3631 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 367 gcctgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgc 420 |||||||||||||||| |||||| || |||||||| |||||||||||||||||| Sbjct: 258 gcctgcaacgagtgcggcttcccggtgtgccgcccctgctacgagtacgagcgc 311
>dbj|AK100877.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127C10, full insert sequence Length = 4029 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 367 gcctgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgc 420 ||||||||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 339 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgc 392
>gb|AY483152.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA2) mRNA, complete cds Length = 3907 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 367 gcctgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcg 419 ||||||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 243 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcg 295
>gb|AY483151.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA3) mRNA, partial cds Length = 3362 Score = 69.9 bits (35), Expect = 7e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 379 tgcgccttcccagtctgccgcccttgctacgagtacgagcgcaagga 425 ||||||||||| |||||||| || ||||||||||||||||||||||| Sbjct: 79 tgcgccttccccgtctgccggccctgctacgagtacgagcgcaagga 125
>gb|AY372246.1| Zea mays cellulose synthase catalytic subunit 12 (CesA12) mRNA, complete cds Length = 3443 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 367 gcctgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgc 420 |||||||||||||||| |||||| || ||||| || |||||||||||||||||| Sbjct: 254 gcctgcaacgagtgcggcttccccgtgtgccggccctgctacgagtacgagcgc 307
>ref|XM_477093.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3954 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 379 tgcgccttcccagtctgccgcccttgctacgagtacgagcgcaaggatgg 428 |||| |||||| || |||||||| |||||||||||||||||||||||||| Sbjct: 557 tgcggcttcccggtgtgccgcccctgctacgagtacgagcgcaaggatgg 606
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 379 tgcgccttcccagtctgccgcccttgctacgagtacgagcgcaaggatgg 428 |||| |||||| || |||||||| |||||||||||||||||||||||||| Sbjct: 5890086 tgcggcttcccggtgtgccgcccctgctacgagtacgagcgcaaggatgg 5890037 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 370 tgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgc 420 |||||||||||||||||||| || |||||| |||||||||||||||||| Sbjct: 13693023 tgcaacgagtgcgccttcccggtgtgccgcgactgctacgagtacgagcgc 13692973 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 370 tgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgc 420 |||||||||||||||||||| ||||||||| |||||||| ||||||||| Sbjct: 8528688 tgcaacgagtgcgccttccccgtctgccgcaactgctacgactacgagcgc 8528738
>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_A05 Length = 120823 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 379 tgcgccttcccagtctgccgcccttgctacgagtacgagcgcaaggatgg 428 |||| |||||| || |||||||| |||||||||||||||||||||||||| Sbjct: 32534 tgcggcttcccggtgtgccgcccctgctacgagtacgagcgcaaggatgg 32485
>dbj|AP003837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1559_F09 Length = 87792 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 379 tgcgccttcccagtctgccgcccttgctacgagtacgagcgcaaggatgg 428 |||| |||||| || |||||||| |||||||||||||||||||||||||| Sbjct: 64760 tgcggcttcccggtgtgccgcccctgctacgagtacgagcgcaaggatgg 64711
>dbj|AK072356.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023059I02, full insert sequence Length = 3954 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 379 tgcgccttcccagtctgccgcccttgctacgagtacgagcgcaaggatgg 428 |||| |||||| || |||||||| |||||||||||||||||||||||||| Sbjct: 557 tgcggcttcccggtgtgccgcccctgctacgagtacgagcgcaaggatgg 606
>gb|AC137522.11| Medicago truncatula clone mth2-9h8, complete sequence Length = 117720 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 360 ctttgttgcctgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcg 419 ||||||||| ||||| ||||| || ||||| || ||||| |||||||||||||||||||| Sbjct: 98178 ctttgttgcttgcaatgagtgtgctttccctgtttgccggccttgctacgagtacgagcg 98119
>gb|AY372244.1| Zea mays cellulose synthase catalytic subunit 10 (CesA10) mRNA, complete cds Length = 3470 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 375 cgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgca 421 |||||||| |||||| |||||||| || ||||||||||||||||||| Sbjct: 211 cgagtgcggcttccccgtctgccggccctgctacgagtacgagcgca 257
>ref|XM_477282.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3746 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 370 tgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgc 420 |||||||||||||||||||| ||||||||| |||||||| ||||||||| Sbjct: 246 tgcaacgagtgcgccttccccgtctgccgcaactgctacgactacgagcgc 296
>gb|AY162181.1| Populus tremuloides cellulose synthase (CesA4) mRNA, complete cds Length = 3640 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 359 tctttgttgcctgcaacgagtgcgccttcccagtctgccgcccttgctacgagta 413 |||||||||| ||||||||||| || |||||||| ||||| ||||| |||||||| Sbjct: 194 tctttgttgcttgcaacgagtgtgctttcccagtttgccgtccttgttacgagta 248
>gb|DQ014506.1| Eucalyptus grandis cellulose synthase 2 (CesA2) mRNA, complete cds Length = 3471 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 367 gcctgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgca 421 |||||| ||||||||| |||||| ||||||||||| ||||||| |||||||||| Sbjct: 256 gcctgccacgagtgcggcttccccgtctgccgcccctgctacgtctacgagcgca 310
>gb|AF200529.1|AF200529 Zea mays cellulose synthase-5 (CesA-5) mRNA, complete cds Length = 3676 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 379 tgcgccttcccagtctgccgcccttgctacgagtacgagcgcaagga 425 |||| |||||| || |||||||| ||||||||||||||||||||||| Sbjct: 371 tgcggcttccccgtgtgccgcccatgctacgagtacgagcgcaagga 417
>dbj|AP005824.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0669H03 Length = 167878 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 370 tgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgc 420 |||||||||||||||||||| ||||||||| |||||||| ||||||||| Sbjct: 61156 tgcaacgagtgcgccttccccgtctgccgcaactgctacgactacgagcgc 61206
>dbj|AP004298.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0409D09 Length = 150485 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 370 tgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgc 420 |||||||||||||||||||| || |||||| |||||||||||||||||| Sbjct: 44015 tgcaacgagtgcgccttcccggtgtgccgcgactgctacgagtacgagcgc 43965
>dbj|AK121193.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086F23, full insert sequence Length = 4127 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 370 tgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgc 420 |||||||||||||||||||| || |||||| |||||||||||||||||| Sbjct: 427 tgcaacgagtgcgccttcccggtgtgccgcgactgctacgagtacgagcgc 477
>dbj|AK120236.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043M21, full insert sequence Length = 2931 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 370 tgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgc 420 |||||||||||||||||||| || |||||| |||||||||||||||||| Sbjct: 429 tgcaacgagtgcgccttcccggtgtgccgcgactgctacgagtacgagcgc 479
>dbj|AK099735.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090G16, full insert sequence Length = 2064 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 370 tgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgc 420 |||||||||||||||||||| ||||||||| |||||||| ||||||||| Sbjct: 246 tgcaacgagtgcgccttccccgtctgccgcaactgctacgactacgagcgc 296
>dbj|AK100914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133D04, full insert sequence Length = 3746 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 370 tgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgc 420 |||||||||||||||||||| ||||||||| |||||||| ||||||||| Sbjct: 246 tgcaacgagtgcgccttccccgtctgccgcaactgctacgactacgagcgc 296
>dbj|AK073561.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042D15, full insert sequence Length = 4208 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 370 tgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgc 420 |||||||||||||||||||| || |||||| |||||||||||||||||| Sbjct: 508 tgcaacgagtgcgccttcccggtgtgccgcgactgctacgagtacgagcgc 558
>gb|AY110079.1| Zea mays CL1164_1 mRNA sequence Length = 3696 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 379 tgcgccttcccagtctgccgcccttgctacgagtacgagcgcaagga 425 |||| |||||| || |||||||| ||||||||||||||||||||||| Sbjct: 371 tgcggcttccccgtgtgccgcccatgctacgagtacgagcgcaagga 417
>gb|AY483150.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA1) mRNA, complete cds Length = 3605 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 384 cttcccagtctgccgcccttgctacgagtacgagcgcaagga 425 |||||| ||||||||||| ||||||||| ||||||||||||| Sbjct: 186 cttcccggtctgccgcccctgctacgagcacgagcgcaagga 227
>gb|BT009438.1| Triticum aestivum clone wlmk4.pk0015.a11:fis, full insert mRNA sequence Length = 3626 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 384 cttcccagtctgccgcccttgctacgagtacgagcgcaagga 425 |||||| ||||||||||| ||||||||| ||||||||||||| Sbjct: 185 cttcccggtctgccgcccctgctacgagcacgagcgcaagga 226
>gb|AF200530.1|AF200530 Zea mays cellulose synthase-6 (CesA-6) mRNA, complete cds Length = 3538 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 367 gcctgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgc 420 ||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 121 gcctgcaacgagtgcgccttccccatctgccgggactgctacgagtacgagcgc 174
>dbj|AB158407.1| Triticum aestivum CesA mRNA for putative cellulose synthase, complete cds Length = 3681 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 384 cttcccagtctgccgcccttgctacgagtacgagcgcaagga 425 |||||| ||||||||||| ||||||||| ||||||||||||| Sbjct: 211 cttcccggtctgccgcccctgctacgagcacgagcgcaagga 252
>gb|AY104730.1| Zea mays PCO100501 mRNA sequence Length = 3783 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 367 gcctgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgc 420 ||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 354 gcctgcaacgagtgcgccttccccatctgccgggactgctacgagtacgagcgc 407
>gb|AC166741.1| Brassica rapa subsp. pekinensis clone KBrH080C09, complete sequence Length = 132099 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 361 tttgttgcctgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgag 417 |||||||| ||||||||||| |||||||| || || | |||||||||||||||||| Sbjct: 17844 tttgttgcgtgcaacgagtgtgccttccctgtgtgtagaccttgctacgagtacgag 17900
>gb|AF200533.1|AF200533 Zea mays cellulose synthase-9 (CesA-9) mRNA, complete cds Length = 3795 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 385 ttcccagtctgccgcccttgctacgagtacgagcgcaagga 425 ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 364 ttcccggtgtgccgcccctgctacgagtacgagcgcaagga 404
>gb|AY112236.1| Zea mays CL1160_1 mRNA sequence Length = 3728 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 385 ttcccagtctgccgcccttgctacgagtacgagcgcaagga 425 ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 364 ttcccggtgtgccgcccctgctacgagtacgagcgcaagga 404
>gb|AF200528.1|AF200528 Zea mays cellulose synthase-4 (CesA-4) mRNA, complete cds Length = 3745 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 394 tgccgcccttgctacgagtacgagcgcaagga 425 |||||||| ||||||||||||||||||||||| Sbjct: 455 tgccgcccctgctacgagtacgagcgcaagga 486
>gb|AY108113.1| Zea mays PCO126465 mRNA sequence Length = 3763 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 394 tgccgcccttgctacgagtacgagcgcaagga 425 |||||||| ||||||||||||||||||||||| Sbjct: 473 tgccgcccctgctacgagtacgagcgcaagga 504
>gb|DQ020212.1| Bambusa oldhamii cellulose synthase BoCesA4b mRNA, partial cds Length = 3409 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 379 tgcgccttcccagtctgccgcccttgctacgagtacgagcgcaagga 425 |||| |||||| || ||||| || ||||||||||||||||||||||| Sbjct: 73 tgcggcttcccggtgtgccggccctgctacgagtacgagcgcaagga 119
>gb|DQ020211.1| Bambusa oldhamii cellulose synthase BoCesA4a mRNA, complete cds Length = 3756 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 379 tgcgccttcccagtctgccgcccttgctacgagtacgagcgcaagga 425 |||| |||||| || ||||| || ||||||||||||||||||||||| Sbjct: 417 tgcggcttcccggtgtgccggccctgctacgagtacgagcgcaagga 463
>gb|AF200531.1|AF200531 Zea mays cellulose synthase-7 (CesA-7) mRNA, complete cds Length = 3968 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 370 tgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgc 420 |||||||||||||||||||| |||||||| |||||||| ||||||||| Sbjct: 314 tgcaacgagtgcgccttccccgtctgccgggactgctacgaatacgagcgc 364
>gb|AY103655.1| Zea mays PCO096398 mRNA sequence Length = 3897 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 370 tgcaacgagtgcgccttcccagtctgccgcccttgctacgagtacgagcgc 420 |||||||||||||||||||| |||||||| |||||||| ||||||||| Sbjct: 327 tgcaacgagtgcgccttccccgtctgccgggactgctacgaatacgagcgc 377
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 379 tgcgccttcccagtctgccgcccttgctacgagtacgagcgcaaggatgg 428 |||| |||||| || |||||||| ||||| ||||||||||| |||||||| Sbjct: 288476 tgcggcttcccggtgtgccgcccctgctatgagtacgagcgaaaggatgg 288525
>gb|DQ014509.1| Eucalyptus grandis cellulose synthase 5 (CesA5) mRNA, complete cds Length = 3712 Score = 52.0 bits (26), Expect = 0.002 Identities = 83/102 (81%) Strand = Plus / Plus Query: 316 cagatatgtggtgataccgttggcgtttcggccgctggtgatgtctttgttgcctgcaac 375 ||||||||||| ||||||||||| || ||||| || ||||| |||||||| ||||| Sbjct: 227 cagatatgtggcgataccgttggacttacggccagcggcgatgtttttgttgcttgcaat 286 Query: 376 gagtgcgccttcccagtctgccgcccttgctacgagtacgag 417 ||||| || ||||| || ||||| || || || ||||||||| Sbjct: 287 gagtgtgcattccctgtgtgccgtccctgttatgagtacgag 328
>dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0005A05 Length = 190834 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 379 tgcgccttcccagtctgccgcccttgctacgagtacgagcgcaaggatgg 428 |||| |||||| || |||||||| ||||| ||||||||||| |||||||| Sbjct: 40314 tgcggcttcccggtgtgccgcccctgctatgagtacgagcgaaaggatgg 40363
>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0436E04 Length = 144644 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 379 tgcgccttcccagtctgccgcccttgctacgagtacgagcgcaaggatgg 428 |||| |||||| || |||||||| ||||| ||||||||||| |||||||| Sbjct: 130146 tgcggcttcccggtgtgccgcccctgctatgagtacgagcgaaaggatgg 130195
>dbj|AK106913.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-A09, full insert sequence Length = 1950 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 379 tgcgccttcccagtctgccgcccttgctacgagtacgagcgcaaggatgg 428 |||| |||||| || |||||||| ||||| ||||||||||| |||||||| Sbjct: 917 tgcggcttcccggtgtgccgcccctgctatgagtacgagcgaaaggatgg 966
>ref|XM_470040.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3607 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 385 ttcccagtctgccgcccttgctacgagtacgagcgcaagga 425 ||||| || ||||| || ||||||||||||||||||||||| Sbjct: 494 ttcccggtgtgccggccatgctacgagtacgagcgcaagga 534
>gb|AC145384.2| Oryza sativa chromosome 3 BAC OSJNBa0060M17 genomic sequence, complete sequence Length = 41693 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 385 ttcccagtctgccgcccttgctacgagtacgagcgcaagga 425 ||||| || ||||| || ||||||||||||||||||||||| Sbjct: 11049 ttcccggtgtgccggccatgctacgagtacgagcgcaagga 11009
>gb|AY196961.1| Populus tremuloides cellulose synthase 6 (CesA6) mRNA, complete cds Length = 3773 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 361 tttgttgcctgcaacgagtgcgccttccc 389 ||||| ||||||||||||||||||||||| Sbjct: 227 tttgtggcctgcaacgagtgcgccttccc 255
>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete sequence Length = 154555 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 385 ttcccagtctgccgcccttgctacgagtacgagcgcaagga 425 ||||| || ||||| || ||||||||||||||||||||||| Sbjct: 16289 ttcccggtgtgccggccatgctacgagtacgagcgcaagga 16329
>gb|DQ020213.1| Bambusa oldhamii cellulose synthase BoCesA5 mRNA, complete cds Length = 3613 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 385 ttcccagtctgccgcccttgctacgagtacgagcgcaagga 425 ||||| || ||||| || ||||||||||||||||||||||| Sbjct: 338 ttcccggtgtgccggccctgctacgagtacgagcgcaagga 378
>dbj|AK069196.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003G18, full insert sequence Length = 4282 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 385 ttcccagtctgccgcccttgctacgagtacgagcgcaagga 425 ||||| || ||||| || ||||||||||||||||||||||| Sbjct: 383 ttcccggtgtgccggccatgctacgagtacgagcgcaagga 423
>gb|DQ160225.1| Physcomitrella patens cellulose synthase catalytic subunit (CesA7) mRNA, complete cds Length = 4016 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 385 ttcccagtctgccgcccttgctacgagtacgagcgcaaggatggg 429 ||||| || |||||||| ||||||||||| || || ||||||||| Sbjct: 317 ttcccggtgtgccgcccctgctacgagtatgaacggaaggatggg 361
>gb|DQ160224.1| Physcomitrella patens cellulose synthase catalytic subunit (CesA6) mRNA, complete cds Length = 4070 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 385 ttcccagtctgccgcccttgctacgagtacgagcgcaaggatggg 429 ||||| || |||||||| ||||||||||| || || ||||||||| Sbjct: 344 ttcccggtgtgccgcccctgctacgagtatgaacggaaggatggg 388
>emb|BX571861.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 3/17 Length = 342905 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 350 ctggtgatgtctttgttgcct 370 ||||||||||||||||||||| Sbjct: 337765 ctggtgatgtctttgttgcct 337785
>ref|NM_119393.2| Arabidopsis thaliana CESA1 (CELLULASE SYNTHASE 1); transferase, transferring glycosyl groups AT4G32410 (CESA1) mRNA, complete cds Length = 3912 Score = 40.1 bits (20), Expect = 5.9 Identities = 56/68 (82%) Strand = Plus / Plus Query: 350 ctggtgatgtctttgttgcctgcaacgagtgcgccttcccagtctgccgcccttgctacg 409 |||| ||||||||||| || || || || || |||||||| || || || |||||||| | Sbjct: 429 ctggagatgtctttgtcgcgtgtaatgaatgtgccttccctgtgtgtcggccttgctatg 488 Query: 410 agtacgag 417 |||||||| Sbjct: 489 agtacgag 496
>emb|AL389900.2|NCB15I20 Neurospora crassa DNA linkage group II BAC clone B15I20 Length = 47481 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 310 gcctgccagatatgtggtgatacc 333 ||||||||||||||| |||||||| Sbjct: 30218 gcctgccagatatgttgtgatacc 30195
>emb|AL389901.1|NCB7F21 Neurospora crassa DNA linkage group II BAC clone B7F21 Length = 59412 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 310 gcctgccagatatgtggtgatacc 333 ||||||||||||||| |||||||| Sbjct: 54003 gcctgccagatatgttgtgatacc 54026
>emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 77 Length = 197252 Score = 40.1 bits (20), Expect = 5.9 Identities = 56/68 (82%) Strand = Plus / Minus Query: 350 ctggtgatgtctttgttgcctgcaacgagtgcgccttcccagtctgccgcccttgctacg 409 |||| ||||||||||| || || || || || |||||||| || || || |||||||| | Sbjct: 59719 ctggagatgtctttgtcgcgtgtaatgaatgtgccttccctgtgtgtcggccttgctatg 59660 Query: 410 agtacgag 417 |||||||| Sbjct: 59659 agtacgag 59652
>emb|AL034567.1|ATF8B4 Arabidopsis thaliana DNA chromosome 4, BAC clone F8B4 (ESSA project) Length = 93257 Score = 40.1 bits (20), Expect = 5.9 Identities = 56/68 (82%) Strand = Plus / Minus Query: 350 ctggtgatgtctttgttgcctgcaacgagtgcgccttcccagtctgccgcccttgctacg 409 |||| ||||||||||| || || || || || |||||||| || || || |||||||| | Sbjct: 46002 ctggagatgtctttgtcgcgtgtaatgaatgtgccttccctgtgtgtcggccttgctatg 45943 Query: 410 agtacgag 417 |||||||| Sbjct: 45942 agtacgag 45935
>gb|BT008654.1| Arabidopsis thaliana clone RAFL09-89-G08 (R19778) putative cellulose synthase catalytic subunit (RSW1) (At4g32410) mRNA, complete cds Length = 3763 Score = 40.1 bits (20), Expect = 5.9 Identities = 56/68 (82%) Strand = Plus / Plus Query: 350 ctggtgatgtctttgttgcctgcaacgagtgcgccttcccagtctgccgcccttgctacg 409 |||| ||||||||||| || || || || || |||||||| || || || |||||||| | Sbjct: 296 ctggagatgtctttgtcgcgtgtaatgaatgtgccttccctgtgtgtcggccttgctatg 355 Query: 410 agtacgag 417 |||||||| Sbjct: 356 agtacgag 363
>gb|AE005759.1| Caulobacter crescentus CB15 section 85 of 359 of the complete genome Length = 12748 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 165 cgccggtggggcgtgtgaaggcgg 188 ||||||||||||| |||||||||| Sbjct: 8804 cgccggtggggcgggtgaaggcgg 8827
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 agtacgagcgcaaggatggg 429 |||||||||||||||||||| Sbjct: 641167 agtacgagcgcaaggatggg 641186
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 cggcgacgcgcccgccccgg 280 |||||||||||||||||||| Sbjct: 1082814 cggcgacgcgcccgccccgg 1082833
>gb|AF027172.1|AF027172 Arabidopsis thaliana cellulose synthase catalytic subunit (RSW1) gene, complete cds Length = 8401 Score = 40.1 bits (20), Expect = 5.9 Identities = 56/68 (82%) Strand = Plus / Plus Query: 350 ctggtgatgtctttgttgcctgcaacgagtgcgccttcccagtctgccgcccttgctacg 409 |||| ||||||||||| || || || || || |||||||| || || || |||||||| | Sbjct: 2964 ctggagatgtctttgtcgcgtgtaatgaatgtgccttccctgtgtgtcggccttgctatg 3023 Query: 410 agtacgag 417 |||||||| Sbjct: 3024 agtacgag 3031 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,311,350 Number of Sequences: 3902068 Number of extensions: 2311350 Number of successful extensions: 47640 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 91 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 47033 Number of HSP's gapped (non-prelim): 606 length of query: 440 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 418 effective length of database: 17,147,199,772 effective search space: 7167529504696 effective search space used: 7167529504696 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
