ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bastl30d10 |
|---|---|
| Clone Library Name | barley_pub |
>EZ3_MAIZE (Q8S4P4) Polycomb protein EZ3 (Enhancer of zeste protein 3)| Length = 895 Score = 105 bits (261), Expect = 6e-23 Identities = 57/98 (58%), Positives = 71/98 (72%), Gaps = 2/98 (2%) Frame = +3 Query: 123 ASDSSSHRDGPKRPDQGLG--VGTSALMALHGKLTQMKRQIQQARLASIREKLEANRRAL 296 ASDSSS R KR DQG G ++++ +HG LTQ+ RQI+ RL I+EKLEANR+ L Sbjct: 7 ASDSSSQRS--KRSDQGTGREAAPASVVPIHGNLTQLIRQIKSRRLLYIKEKLEANRKTL 64 Query: 297 QKHTCGLFDVAAKAEAASRGSESSNVLSQLAADGQSRV 410 Q+H+C LFDVAA AE ASRGS+ N LSQ AA+GQ R+ Sbjct: 65 QRHSCSLFDVAAAAEVASRGSDGGNALSQRAAEGQFRL 102
>EZ2_MAIZE (Q8S4P5) Polycomb protein EZ2 (Enhancer of zeste protein 2)| Length = 894 Score = 96.7 bits (239), Expect = 2e-20 Identities = 50/98 (51%), Positives = 67/98 (68%), Gaps = 2/98 (2%) Frame = +3 Query: 114 IAMASDSSSHRDGPKRPDQGLGVGTSA--LMALHGKLTQMKRQIQQARLASIREKLEANR 287 +A +S +S KR DQG+G +A ++ +H LTQ+ RQ+Q RLA I+EKLE NR Sbjct: 1 MASSSKASDSSQRSKRSDQGMGKDAAAASVVPIHANLTQLIRQVQSGRLAYIKEKLEVNR 60 Query: 288 RALQKHTCGLFDVAAKAEAASRGSESSNVLSQLAADGQ 401 + LQ+H+C LFDVAA AE ASRG++ N LSQ AA+ Q Sbjct: 61 KTLQRHSCSLFDVAAAAEVASRGTDGGNALSQRAAERQ 98
>EZA1_ARATH (Q9ZSM8) Probable Polycomb group protein EZA1 (CURLY LEAF-like 1)| (Protein SET DOMAIN GROUP 10) Length = 856 Score = 46.6 bits (109), Expect = 2e-05 Identities = 25/62 (40%), Positives = 39/62 (62%) Frame = +3 Query: 195 LMALHGKLTQMKRQIQQARLASIREKLEANRRALQKHTCGLFDVAAKAEAASRGSESSNV 374 L L +L+++KR+IQ R+ SI+EK EANR+ + H F AA + A + + +SN+ Sbjct: 29 LEGLENRLSELKRKIQGERVRSIKEKFEANRKKVDAHV-SPFSSAASSRATAEDNGNSNM 87 Query: 375 LS 380 LS Sbjct: 88 LS 89
>HMW2_MYCPN (P75471) Cytadherence high molecular weight protein 2 (Cytadherence| accessory protein 2) Length = 1818 Score = 33.5 bits (75), Expect = 0.21 Identities = 19/67 (28%), Positives = 36/67 (53%) Frame = +3 Query: 216 LTQMKRQIQQARLASIREKLEANRRALQKHTCGLFDVAAKAEAASRGSESSNVLSQLAAD 395 L+Q + Q + A L ++EKL+ +RAL K ++ A+ + R + + +Q D Sbjct: 1250 LSQQQLQHKYANLLELKEKLQTAKRALDKKHRAIYGKMAQFVSELRQEKKQLLSAQKQVD 1309 Query: 396 GQSRVVE 416 +SR++E Sbjct: 1310 DKSRLLE 1316
>DNAK_STRAG (P0A3J4) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 609 Score = 30.8 bits (68), Expect = 1.4 Identities = 19/69 (27%), Positives = 34/69 (49%) Frame = +3 Query: 201 ALHGKLTQMKRQIQQARLASIREKLEANRRALQKHTCGLFDVAAKAEAASRGSESSNVLS 380 A L ++K+ + L ++ KLEA Q L++ AA A+ A++G+E + Sbjct: 534 AAQSALDELKKAQESGNLDDMKAKLEALNEKAQALAVKLYEQAAAAQQAAQGAEGAQ--- 590 Query: 381 QLAADGQSR 407 +AD S+ Sbjct: 591 --SADSSSK 597
>DNAK_STRA5 (P0A3J3) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 609 Score = 30.8 bits (68), Expect = 1.4 Identities = 19/69 (27%), Positives = 34/69 (49%) Frame = +3 Query: 201 ALHGKLTQMKRQIQQARLASIREKLEANRRALQKHTCGLFDVAAKAEAASRGSESSNVLS 380 A L ++K+ + L ++ KLEA Q L++ AA A+ A++G+E + Sbjct: 534 AAQSALDELKKAQESGNLDDMKAKLEALNEKAQALAVKLYEQAAAAQQAAQGAEGAQ--- 590 Query: 381 QLAADGQSR 407 +AD S+ Sbjct: 591 --SADSSSK 597
>DNAK_STRA3 (P0A3J2) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 609 Score = 30.8 bits (68), Expect = 1.4 Identities = 19/69 (27%), Positives = 34/69 (49%) Frame = +3 Query: 201 ALHGKLTQMKRQIQQARLASIREKLEANRRALQKHTCGLFDVAAKAEAASRGSESSNVLS 380 A L ++K+ + L ++ KLEA Q L++ AA A+ A++G+E + Sbjct: 534 AAQSALDELKKAQESGNLDDMKAKLEALNEKAQALAVKLYEQAAAAQQAAQGAEGAQ--- 590 Query: 381 QLAADGQSR 407 +AD S+ Sbjct: 591 --SADSSSK 597
>DNAK_STRA1 (Q3K3T2) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 609 Score = 30.8 bits (68), Expect = 1.4 Identities = 19/69 (27%), Positives = 34/69 (49%) Frame = +3 Query: 201 ALHGKLTQMKRQIQQARLASIREKLEANRRALQKHTCGLFDVAAKAEAASRGSESSNVLS 380 A L ++K+ + L ++ KLEA Q L++ AA A+ A++G+E + Sbjct: 534 AAQSALDELKKAQESGNLDDMKAKLEALNEKAQALAVKLYEQAAAAQQAAQGAEGAQ--- 590 Query: 381 QLAADGQSR 407 +AD S+ Sbjct: 591 --SADSSSK 597
>DNAK_STRT2 (Q5M6D1) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 607 Score = 29.6 bits (65), Expect = 3.0 Identities = 17/65 (26%), Positives = 28/65 (43%) Frame = +3 Query: 201 ALHGKLTQMKRQIQQARLASIREKLEANRRALQKHTCGLFDVAAKAEAASRGSESSNVLS 380 A L ++K+ + L ++ KLEA Q L++ AA A+ A G+E + Sbjct: 534 AAQSALDELKKAQESGNLDDMKAKLEALNEKAQALAVKLYEQAAAAQQAQAGAEGAQATD 593 Query: 381 QLAAD 395 D Sbjct: 594 NSGDD 598
>DNAK_STRT1 (Q5M1T8) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 607 Score = 29.6 bits (65), Expect = 3.0 Identities = 17/65 (26%), Positives = 28/65 (43%) Frame = +3 Query: 201 ALHGKLTQMKRQIQQARLASIREKLEANRRALQKHTCGLFDVAAKAEAASRGSESSNVLS 380 A L ++K+ + L ++ KLEA Q L++ AA A+ A G+E + Sbjct: 534 AAQSALDELKKAQESGNLDDMKAKLEALNEKAQALAVKLYEQAAAAQQAQAGAEGAQATD 593 Query: 381 QLAAD 395 D Sbjct: 594 NSGDD 598
>SON_HUMAN (P18583) SON protein (SON3) (Negative regulatory element-binding| protein) (NRE-binding protein) (DBP-5) (Bax antagonist selected in saccharomyces 1) (BASS1) Length = 2426 Score = 29.6 bits (65), Expect = 3.0 Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Frame = -1 Query: 415 STTLDWPSAASCDSTLLLSEPLDAASALAATS-NRPQ 308 STT+D+P +++ ++ L +P+D S +A +S RPQ Sbjct: 323 STTMDFPESSAIEALRLPEQPVDVPSEIADSSMTRPQ 359
>YLS6_CAEEL (P34391) Putative cuticle collagen F09G8.6| Length = 278 Score = 29.6 bits (65), Expect = 3.0 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +2 Query: 158 AAGSGARRGHLRAHGAPREADADEAPNPAGPPRV 259 AAG+ +G + + G P A A AP PAG P V Sbjct: 206 AAGAPGPQGPVGSDGQPGSAGAPGAPGPAGAPGV 239
>VGLY_LYCVA (P09991) Glycoprotein polyprotein [Contains: Glycoprotein G1;| Glycoprotein G2] Length = 498 Score = 29.6 bits (65), Expect = 3.0 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = -3 Query: 290 PPVCLQLLPDGREAGLLDLALHLRQLPVERHERGGAHAEP 171 P + LL A L+ + LHL ++P RH +GG+ +P Sbjct: 433 PLALMDLLMFSTSAYLVSIFLHLVKIPTHRHIKGGSCPKP 472
>SYNE1_HUMAN (Q8NF91) Nesprin-1 (Nuclear envelope spectrin repeat protein 1)| (Synaptic nuclear envelope protein 1) (Syne-1) (Myocyte nuclear envelope protein 1) (Myne-1) (Enaptin) Length = 8797 Score = 29.3 bits (64), Expect = 3.9 Identities = 16/60 (26%), Positives = 30/60 (50%) Frame = +3 Query: 168 QGLGVGTSALMALHGKLTQMKRQIQQARLASIREKLEANRRALQKHTCGLFDVAAKAEAA 347 +GLG +L LH Q+K+Q+ AS +++++ +L +H C L K + + Sbjct: 7291 KGLGTVKDSLFFLHELGEQLKQQVD----ASAASAIQSDQLSLSQHLCALEQALCKQQTS 7346
>EXOC8_RAT (O54924) Exocyst complex component 8 (Exocyst complex 84 kDa| subunit) Length = 716 Score = 28.9 bits (63), Expect = 5.2 Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 3/36 (8%) Frame = +2 Query: 158 AAGSGARRGHLRAHGAPREADADEA---PNPAGPPR 256 AA +GA G A PRE A +A P PAG PR Sbjct: 104 AAAAGASTGEDTAGAGPRERGAAQAGFLPGPAGVPR 139
>CAS1_STRCL (Q05581) Clavaminate synthase 1 (EC 1.14.11.21) (Clavaminic acid| synthetase 1) (CAS1) (CS1) Length = 323 Score = 28.9 bits (63), Expect = 5.2 Identities = 13/28 (46%), Positives = 15/28 (53%) Frame = +2 Query: 170 GARRGHLRAHGAPREADADEAPNPAGPP 253 G+ GHL G P EADAD P+ P Sbjct: 56 GSEDGHLLLRGLPVEADADLPTTPSSTP 83
>DNAK_STRR6 (Q8CWT3) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 607 Score = 28.5 bits (62), Expect = 6.7 Identities = 17/65 (26%), Positives = 27/65 (41%) Frame = +3 Query: 201 ALHGKLTQMKRQIQQARLASIREKLEANRRALQKHTCGLFDVAAKAEAASRGSESSNVLS 380 A L +K+ + L ++ KLEA Q L++ AA A+ A G+E + Sbjct: 534 AAQAALDDLKKAQEDNNLDDMKAKLEALNEKAQGLAVKLYEQAAAAQQAQEGAEGAQATG 593 Query: 381 QLAAD 395 D Sbjct: 594 NAGDD 598
>DNAK_STRPY (P0C0C5) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 607 Score = 28.5 bits (62), Expect = 6.7 Identities = 15/56 (26%), Positives = 28/56 (50%) Frame = +3 Query: 201 ALHGKLTQMKRQIQQARLASIREKLEANRRALQKHTCGLFDVAAKAEAASRGSESS 368 A L ++K + L ++ KLEA Q +++ AA A+ A++G+E + Sbjct: 533 AAQSALDELKAAQESGNLDDMKAKLEALNEKAQALAVKMYEQAAAAQQAAQGAEGA 588
>DNAK_STRPN (P95829) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 607 Score = 28.5 bits (62), Expect = 6.7 Identities = 17/65 (26%), Positives = 27/65 (41%) Frame = +3 Query: 201 ALHGKLTQMKRQIQQARLASIREKLEANRRALQKHTCGLFDVAAKAEAASRGSESSNVLS 380 A L +K+ + L ++ KLEA Q L++ AA A+ A G+E + Sbjct: 534 AAQAALDDLKKAQEDNNLDDMKTKLEALNEKAQGLAVKLYEQAAAAQQAQEGAEGAQATG 593 Query: 381 QLAAD 395 D Sbjct: 594 NAGDD 598
>DNAK_STRP8 (P68837) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 607 Score = 28.5 bits (62), Expect = 6.7 Identities = 15/56 (26%), Positives = 28/56 (50%) Frame = +3 Query: 201 ALHGKLTQMKRQIQQARLASIREKLEANRRALQKHTCGLFDVAAKAEAASRGSESS 368 A L ++K + L ++ KLEA Q +++ AA A+ A++G+E + Sbjct: 533 AAQSALDELKAAQESGNLDDMKAKLEALNEKAQALAVKMYEQAAAAQQAAQGAEGA 588
>DNAK_STRP6 (Q5XAD6) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 607 Score = 28.5 bits (62), Expect = 6.7 Identities = 15/56 (26%), Positives = 28/56 (50%) Frame = +3 Query: 201 ALHGKLTQMKRQIQQARLASIREKLEANRRALQKHTCGLFDVAAKAEAASRGSESS 368 A L ++K + L ++ KLEA Q +++ AA A+ A++G+E + Sbjct: 533 AAQSALDELKAAQESGNLDDMKAKLEALNEKAQALAVKMYEQAAAAQQAAQGAEGA 588
>DNAK_STRP3 (Q8K624) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 607 Score = 28.5 bits (62), Expect = 6.7 Identities = 15/56 (26%), Positives = 28/56 (50%) Frame = +3 Query: 201 ALHGKLTQMKRQIQQARLASIREKLEANRRALQKHTCGLFDVAAKAEAASRGSESS 368 A L ++K + L ++ KLEA Q +++ AA A+ A++G+E + Sbjct: 533 AAQSALDELKAAQESGNLDDMKAKLEALNEKAQALAVKMYEQAAAAQQAAQGTEGA 588
>DNAK_STRP1 (P0C0C6) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 607 Score = 28.5 bits (62), Expect = 6.7 Identities = 15/56 (26%), Positives = 28/56 (50%) Frame = +3 Query: 201 ALHGKLTQMKRQIQQARLASIREKLEANRRALQKHTCGLFDVAAKAEAASRGSESS 368 A L ++K + L ++ KLEA Q +++ AA A+ A++G+E + Sbjct: 533 AAQSALDELKAAQESGNLDDMKAKLEALNEKAQALAVKMYEQAAAAQQAAQGAEGA 588
>EXOC8_MOUSE (Q6PGF7) Exocyst complex component 8 (Exocyst complex 84 kDa| subunit) Length = 716 Score = 28.5 bits (62), Expect = 6.7 Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 3/36 (8%) Frame = +2 Query: 158 AAGSGARRGHLRAHGAPREADADEA---PNPAGPPR 256 AA +GA G A PRE A +A P PAG PR Sbjct: 104 AAAAGASAGEDTAGAGPRERGAVQAGFLPGPAGVPR 139
>CEP2_HUMAN (Q9BV73) Centrosomal protein 2 (Centrosomal Nek2-associated protein| 1) (C-NAP1) (Centrosome protein 250) (Centrosome-associated protein CEP250) Length = 2442 Score = 28.5 bits (62), Expect = 6.7 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 6/76 (7%) Frame = +3 Query: 198 MALHGKLTQMKRQIQQARLASIREKLEANRRALQKHTCGLFDVAAKAEAASRG------S 359 +A+ + + ++R +Q RL +++LE RRAL+K + AE SRG Sbjct: 2193 VAMFLQASVLERDSEQQRL---QDELELTRRALEKERLHSPGATSTAELGSRGEQGVQLG 2249 Query: 360 ESSNVLSQLAADGQSR 407 E S V ++ + DG + Sbjct: 2250 EVSGVEAEPSPDGMEK 2265
>VGLY_LYCVW (P07399) Glycoprotein polyprotein [Contains: Glycoprotein G1;| Glycoprotein G2] Length = 498 Score = 28.5 bits (62), Expect = 6.7 Identities = 13/40 (32%), Positives = 21/40 (52%) Frame = -3 Query: 290 PPVCLQLLPDGREAGLLDLALHLRQLPVERHERGGAHAEP 171 P + LL A L+ + LH ++P RH +GG+ +P Sbjct: 433 PLALMDLLMFSTSAYLISIFLHFVRIPTHRHIKGGSCPKP 472
>DPO3A_TREPA (O83675) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 1170 Score = 28.5 bits (62), Expect = 6.7 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +3 Query: 213 KLTQMKRQIQQARLASIREKLEANRRALQKHTCGL 317 +L QMK++ + A L I EKLE R H G+ Sbjct: 479 QLAQMKQEPRYAELFQIAEKLEDTNRNTSLHAAGI 513
>TFB3_SCHPO (O94684) RNA polymerase II transcription factor B subunit 3 (RNA| polymerase II transcription factor B p38 subunit) (RNA polymerase II transcription factor B 38 kDa subunit) (CDK-activating kinase assembly factor MAT1 homolog) (RING finger prot Length = 318 Score = 28.1 bits (61), Expect = 8.8 Identities = 17/53 (32%), Positives = 29/53 (54%) Frame = +3 Query: 225 MKRQIQQARLASIREKLEANRRALQKHTCGLFDVAAKAEAASRGSESSNVLSQ 383 +KRQ Q+AR A+IRE + R Q +FD+A + ++ + S+ L + Sbjct: 164 LKRQKQEAREAAIREHQKEKERREQVEQQIIFDLATSGKDPNKIIQLSDSLKK 216 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,873,623 Number of Sequences: 219361 Number of extensions: 652681 Number of successful extensions: 2919 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 2610 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2916 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
