ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl30d10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF407010.1| Oryza sativa SET domain-containing protein (SET1)... 74 4e-10
2gb|AF443597.1| Zea mays enhancer of zeste-like protein 2 (mez2) ... 60 6e-06
3gb|AF443598.1| Zea mays enhancer of zeste-like protein 3 (mez3) ... 58 2e-05
4gb|AC124228.16| Mus musculus chromosome 5, clone RP23-345O14, co... 44 0.36
5gb|AC132102.3| Mus musculus BAC clone RP24-360K9 from chromosome... 44 0.36
6gb|AC084502.1|CBRG14F21 Caenorhabditis briggsae cosmid G14F21, c... 44 0.36
7gb|AC110520.12| Mus musculus chromosome 7, clone RP23-24N16, com... 42 1.4
8ref|XM_483607.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.4
9dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
10dbj|AP003914.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
11dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
12dbj|AB055327.1| Macaca fascicularis brain cDNA, clone:QflA-10461 42 1.4
13gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, c... 40 5.6
14gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome 40 5.6
15gb|AC186369.1| Pan troglodytes chromosome UNKNOWN clone CH251-21... 40 5.6
16gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 5.6
17ref|NM_182996.2| Mus musculus zinc finger protein 692 (Zfp692), ... 40 5.6
18gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.6
19gb|AC024730.7| Homo sapiens BAC clone RP11-422E4 from 7, complet... 40 5.6
20ref|XM_842965.1| Leishmania major strain Friedlin hypothetical p... 40 5.6
21emb|CR705236.2|CNS0G740 Tetraodon nigroviridis full-length cDNA 40 5.6
22gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 5.6
23emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 5.6
24emb|AJ421722.3|OSA421722 Oryza sativa (indica cultivar-group) mR... 40 5.6
25emb|AL845463.7| Mouse DNA sequence from clone RP23-386K17 on chr... 40 5.6
26emb|BX322668.29| Mouse DNA sequence from clone RP23-24H2 on chro... 40 5.6
27gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 5.6
28dbj|AK154896.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 5.6
29gb|BC055041.1| Mus musculus zinc finger protein 692, mRNA (cDNA ... 40 5.6
30dbj|AK170358.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 5.6
31dbj|AK170229.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 5.6
32dbj|AK080545.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 40 5.6
33gb|AC007707.14| Homo sapiens chromosome 11 clone rp11-442e11 map... 40 5.6
34dbj|AK031177.1| Mus musculus 13 days embryo forelimb cDNA, RIKEN... 40 5.6
35gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 5.6
36dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
37dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
38gb|AE004476.1| Pseudomonas aeruginosa PAO1, section 37 of 529 of... 40 5.6
39dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 5.6
40dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
41dbj|AP006216.1| Homo sapiens genomic DNA, chromosome 11, clone:R... 40 5.6
42gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 5.6
43gb|AC002037.1|AC002037 Human Chromosome 11 Overlapping Cosmids c... 40 5.6
44gb|U73648.1|HSU73648 Human chromosome 11 72g7 cosmid, complete s... 40 5.6
45gb|AC131682.4| Mus musculus BAC clone RP23-355L3 from chromosome... 40 5.6 
>gb|AF407010.1| Oryza sativa SET domain-containing protein (SET1) mRNA, complete
           cds
          Length = 2957

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 145/181 (80%)
 Strand = Plus / Plus

                                                                       
Query: 201 gcgctccacgggaagctgacgcagatgaagcgccaaatccagcaggcccgcctcgcgtcc 260
           ||||| |||||||||||| ||||| ||||||| ||  ||||     ||||||||||  | 
Sbjct: 115 gcgctgcacgggaagctggcgcagctgaagcgtcaggtccaatccacccgcctcgccgcg 174

                                                                       
Query: 261 atcagggagaagctggaggcaaacaggagggcgctgcagaagcacacctgcggcctgttc 320
           |||| ||||| | ||||||| ||||||| ||||||||||  |||||| ||||  ||||||
Sbjct: 175 atcaaggagagggtggaggcgaacaggaaggcgctgcaggtgcacacgtgcgctctgttc 234

                                                                       
Query: 321 gatgtggccgccaaggcggaggcggcgtcgaggggctctgagagcagcaacgtgctgtcg 380
           || || |||||   |||||||| ||||||| ||||| | ||| || |||||| |||||||
Sbjct: 235 gacgtcgccgcggcggcggaggtggcgtcgcggggcgccgagggcggcaacgcgctgtcg 294

            
Query: 381 c 381
           |
Sbjct: 295 c 295



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 151 gccccaagcggccggatcaggggc 174
           ||||||||||||||||||| ||||
Sbjct: 62  gccccaagcggccggatcaagggc 85
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>gb|AF443597.1| Zea mays enhancer of zeste-like protein 2 (mez2) mRNA, complete cds
          Length = 3047

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 117/146 (80%)
 Strand = Plus / Plus

                                                                       
Query: 249 cgcctcgcgtccatcagggagaagctggaggcaaacaggagggcgctgcagaagcacacc 308
           |||||||||| ||||| ||||||  ||||||  |||||||   ||||||||| |||| ||
Sbjct: 171 cgcctcgcgtacatcaaggagaaattggaggtgaacaggaaaacgctgcagaggcactcc 230

                                                                       
Query: 309 tgcggcctgttcgatgtggccgccaaggcggaggcggcgtcgaggggctctgagagcagc 368
           |||   |||||||| ||||| ||   |||||||| ||||||||||||| | ||  || ||
Sbjct: 231 tgctcgctgttcgacgtggcagcggcggcggaggtggcgtcgaggggcaccgatggcggc 290

                                     
Query: 369 aacgtgctgtcgcagctcgccgcgga 394
           |||| |||||| |||| ||| |||||
Sbjct: 291 aacgcgctgtcacagcgcgcggcgga 316
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>gb|AF443598.1| Zea mays enhancer of zeste-like protein 3 (mez3) mRNA, complete cds
          Length = 3149

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 80/97 (82%)
 Strand = Plus / Plus

                                                                       
Query: 260 catcagggagaagctggaggcaaacaggagggcgctgcagaagcacacctgcggcctgtt 319
           ||||| ||||||  ||||||| ||||||| | ||||||||| |||| |||||   |||||
Sbjct: 212 catcaaggagaaattggaggctaacaggaagacgctgcagaggcactcctgctcgctgtt 271

                                                
Query: 320 cgatgtggccgccaaggcggaggcggcgtcgaggggc 356
           ||| ||||| ||   |||||||| |||||||||||||
Sbjct: 272 cgacgtggcagcggcggcggaggtggcgtcgaggggc 308



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 122 ggcctccgactcctcctccca 142
           |||||||||||||||||||||
Sbjct: 74  ggcctccgactcctcctccca 94
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>gb|AC124228.16| Mus musculus chromosome 5, clone RP23-345O14, complete sequence
          Length = 219244

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 270    aagctggaggcaaacaggaggg 291
              ||||||||||||||||||||||
Sbjct: 158531 aagctggaggcaaacaggaggg 158552
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>gb|AC132102.3| Mus musculus BAC clone RP24-360K9 from chromosome 5, complete
            sequence
          Length = 144545

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 270  aagctggaggcaaacaggaggg 291
            ||||||||||||||||||||||
Sbjct: 8616 aagctggaggcaaacaggaggg 8637
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>gb|AC084502.1|CBRG14F21 Caenorhabditis briggsae cosmid G14F21, complete sequence
          Length = 39439

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 37    gcgtcgacagaggacagagaag 58
             ||||||||||||||||||||||
Sbjct: 13015 gcgtcgacagaggacagagaag 13036
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>gb|AC110520.12| Mus musculus chromosome 7, clone RP23-24N16, complete sequence
          Length = 248540

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 127    ccgactcctcctcccaccggg 147
              |||||||||||||||||||||
Sbjct: 127475 ccgactcctcctcccaccggg 127495
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>ref|XM_483607.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 792

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 327 gccgccaaggcggaggcggcg 347
           |||||||||||||||||||||
Sbjct: 152 gccgccaaggcggaggcggcg 132
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 327      gccgccaaggcggaggcggcg 347
                |||||||||||||||||||||
Sbjct: 27216566 gccgccaaggcggaggcggcg 27216586
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>dbj|AP003914.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1521_G02
          Length = 117964

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 327    gccgccaaggcggaggcggcg 347
              |||||||||||||||||||||
Sbjct: 117599 gccgccaaggcggaggcggcg 117619
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>dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0623F08
          Length = 154540

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 327   gccgccaaggcggaggcggcg 347
             |||||||||||||||||||||
Sbjct: 39769 gccgccaaggcggaggcggcg 39789
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>dbj|AB055327.1| Macaca fascicularis brain cDNA, clone:QflA-10461
          Length = 1567

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 258 tccatcagggagaagctggag 278
           |||||||||||||||||||||
Sbjct: 753 tccatcagggagaagctggag 773
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>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence
          Length = 1130447

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 337    cggaggcggcgtcgaggggc 356
              ||||||||||||||||||||
Sbjct: 444958 cggaggcggcgtcgaggggc 444939
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>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome
          Length = 3481691

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 132     tcctcctcccaccgggacgg 151
               ||||||||||||||||||||
Sbjct: 1662139 tcctcctcccaccgggacgg 1662120
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>gb|AC186369.1| Pan troglodytes chromosome UNKNOWN clone CH251-21L17, complete sequence
          Length = 204239

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 221   gcagatgaagcgccaaatccagca 244
             |||||||||||||||||| |||||
Sbjct: 19928 gcagatgaagcgccaaattcagca 19951
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 374    gctgtcgcagctcgccgcggacgg 397
              ||||||||||||||||||| ||||
Sbjct: 654057 gctgtcgcagctcgccgcgtacgg 654034
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>ref|NM_182996.2| Mus musculus zinc finger protein 692 (Zfp692), mRNA
          Length = 2308

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 315 ctgttcgatgtggccgccaaggcggaggcggc 346
           |||||| ||||||||||| ||||||| |||||
Sbjct: 336 ctgttccatgtggccgcccaggcggatgcggc 305
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 201      gcgctccacgggaagctgacgcagatgaagcg 232
                ||||| |||||||||||| ||||| |||||||
Sbjct: 10931225 gcgctgcacgggaagctggcgcagctgaagcg 10931194
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>gb|AC024730.7| Homo sapiens BAC clone RP11-422E4 from 7, complete sequence
          Length = 151198

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 268   agaagctggaggcaaacagg 287
             ||||||||||||||||||||
Sbjct: 30138 agaagctggaggcaaacagg 30157
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>ref|XM_842965.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0361)
           partial mRNA
          Length = 1260

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 337 cggaggcggcgtcgaggggc 356
           ||||||||||||||||||||
Sbjct: 227 cggaggcggcgtcgaggggc 246
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>emb|CR705236.2|CNS0G740 Tetraodon nigroviridis full-length cDNA
          Length = 390

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 111 gtcatcgccatggcctccga 130
           ||||||||||||||||||||
Sbjct: 47  gtcatcgccatggcctccga 66
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>gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1145F05,
             from chromosome 3, complete sequence
          Length = 127348

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 201   gcgctccacgggaagctgacgcagatgaagcg 232
             ||||| |||||||||||| ||||| |||||||
Sbjct: 49804 gcgctgcacgggaagctggcgcagctgaagcg 49835
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 374     gctgtcgcagctcgccgcggacgg 397
               ||||||||||||||||||| ||||
Sbjct: 1973172 gctgtcgcagctcgccgcgtacgg 1973149
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>emb|AJ421722.3|OSA421722 Oryza sativa (indica cultivar-group) mRNA for enhancer of zeste
           protein (ez1 gene)
          Length = 3133

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 151 gccccaagcggccggatcaggggc 174
           ||||||||||||||||||| ||||
Sbjct: 259 gccccaagcggccggatcaagggc 282
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>emb|AL845463.7| Mouse DNA sequence from clone RP23-386K17 on chromosome 11 Contains
            a novel pseudogene, three novel genes and three CpG
            islands, complete sequence
          Length = 59235

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 315  ctgttcgatgtggccgccaaggcggaggcggc 346
            |||||| ||||||||||| ||||||| |||||
Sbjct: 7969 ctgttccatgtggccgcccaggcggatgcggc 7938
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>emb|BX322668.29| Mouse DNA sequence from clone RP23-24H2 on chromosome X, complete
             sequence
          Length = 173538

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    acagaggacagagaagtcag 62
             ||||||||||||||||||||
Sbjct: 68030 acagaggacagagaagtcag 68049
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 110    cgtcatcgccatggcctccg 129
              ||||||||||||||||||||
Sbjct: 559191 cgtcatcgccatggcctccg 559210
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>dbj|AK154896.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630110L23
           product:hypothetical protein, full insert sequence
          Length = 2423

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 315 ctgttcgatgtggccgccaaggcggaggcggc 346
           |||||| ||||||||||| ||||||| |||||
Sbjct: 312 ctgttccatgtggccgcccaggcggatgcggc 281
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>gb|BC055041.1| Mus musculus zinc finger protein 692, mRNA (cDNA clone MGC:62804
           IMAGE:6490467), complete cds
          Length = 2308

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 315 ctgttcgatgtggccgccaaggcggaggcggc 346
           |||||| ||||||||||| ||||||| |||||
Sbjct: 336 ctgttccatgtggccgcccaggcggatgcggc 305
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>dbj|AK170358.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630101B12
           product:weakly similar to Zinc finger protein 91 [Mus
           musculus], full insert sequence
          Length = 1780

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 315 ctgttcgatgtggccgccaaggcggaggcggc 346
           |||||| ||||||||||| ||||||| |||||
Sbjct: 208 ctgttccatgtggccgcccaggcggatgcggc 177
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>dbj|AK170229.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630034F15
           product:hypothetical Zn-finger, C2H2 type containing
           protein, full insert sequence
          Length = 2234

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 315 ctgttcgatgtggccgccaaggcggaggcggc 346
           |||||| ||||||||||| ||||||| |||||
Sbjct: 373 ctgttccatgtggccgcccaggcggatgcggc 342
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>dbj|AK080545.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:A730082L10 product:hypothetical
           protein, full insert sequence
          Length = 1141

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 315 ctgttcgatgtggccgccaaggcggaggcggc 346
           |||||| ||||||||||| ||||||| |||||
Sbjct: 372 ctgttccatgtggccgcccaggcggatgcggc 341
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>gb|AC007707.14| Homo sapiens chromosome 11 clone rp11-442e11 map 11q23, complete
             sequence
          Length = 188963

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 221   gcagatgaagcgccaaatccagca 244
             |||||||||||||||||| |||||
Sbjct: 13528 gcagatgaagcgccaaattcagca 13551
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>dbj|AK031177.1| Mus musculus 13 days embryo forelimb cDNA, RIKEN full-length
           enriched library, clone:5930422I09 product:weakly
           similar to zinc finger protein (fragment) [Mus
           musculus], full insert sequence
          Length = 2191

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 315 ctgttcgatgtggccgccaaggcggaggcggc 346
           |||||| ||||||||||| ||||||| |||||
Sbjct: 310 ctgttccatgtggccgcccaggcggatgcggc 279
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 374    gctgtcgcagctcgccgcggacgg 397
              ||||||||||||||||||| ||||
Sbjct: 828667 gctgtcgcagctcgccgcgtacgg 828690
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 121      tggcctccgactcctcctcc 140
                ||||||||||||||||||||
Sbjct: 25242103 tggcctccgactcctcctcc 25242084
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 201      gcgctccacgggaagctgacgcagatgaagcg 232
                ||||| |||||||||||| ||||| |||||||
Sbjct: 10929326 gcgctgcacgggaagctggcgcagctgaagcg 10929295
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>gb|AE004476.1| Pseudomonas aeruginosa PAO1, section 37 of 529 of the complete genome
          Length = 11930

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 81   gcaggaggtggtcggcctgc 100
            ||||||||||||||||||||
Sbjct: 7605 gcaggaggtggtcggcctgc 7586
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 305     cacctgcggcctgttcgatgtggc 328
               |||| |||||||||||||||||||
Sbjct: 1327462 cacccgcggcctgttcgatgtggc 1327439
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>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0616D06
          Length = 153800

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   tggcctccgactcctcctcc 140
             ||||||||||||||||||||
Sbjct: 58774 tggcctccgactcctcctcc 58755
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>dbj|AP006216.1| Homo sapiens genomic DNA, chromosome 11, clone:RP11-87O6, complete
             sequence
          Length = 177334

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 221   gcagatgaagcgccaaatccagca 244
             |||||||||||||||||| |||||
Sbjct: 16913 gcagatgaagcgccaaattcagca 16936
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 374     gctgtcgcagctcgccgcggacgg 397
               ||||||||||||||||||| ||||
Sbjct: 1124636 gctgtcgcagctcgccgcgtacgg 1124659
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>gb|AC002037.1|AC002037 Human Chromosome 11 Overlapping Cosmids cSRL72g7 and cSRL140b8,
             complete sequence
          Length = 53897

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 221   gcagatgaagcgccaaatccagca 244
             |||||||||||||||||| |||||
Sbjct: 29696 gcagatgaagcgccaaattcagca 29673
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>gb|U73648.1|HSU73648 Human chromosome 11 72g7 cosmid, complete sequence
          Length = 36565

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 221   gcagatgaagcgccaaatccagca 244
             |||||||||||||||||| |||||
Sbjct: 12371 gcagatgaagcgccaaattcagca 12348
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>gb|AC131682.4| Mus musculus BAC clone RP23-355L3 from chromosome unknown, complete
             sequence
          Length = 196773

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    acagaggacagagaagtcag 62
             ||||||||||||||||||||
Sbjct: 83679 acagaggacagagaagtcag 83660


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,870,552
Number of Sequences: 3902068
Number of extensions: 2870552
Number of successful extensions: 63303
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62721
Number of HSP's gapped (non-prelim): 582
length of query: 421
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 399
effective length of database: 17,147,199,772
effective search space: 6841732709028
effective search space used: 6841732709028
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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