ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl30d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478288.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.43
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.43
3dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 44 0.43
4dbj|AP005186.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.43
5ref|NM_196537.1| Oryza sativa (japonica cultivar-group) hypothet... 42 1.7
6emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete ... 42 1.7
7ref|XM_683633.1| PREDICTED: Danio rerio hypothetical protein LOC... 42 1.7
8dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
9gb|AC027662.2|AC027662 Oryza sativa (japonica cultivar-group) ch... 42 1.7
10dbj|AK066224.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
11gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
12gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, ... 40 6.6
13ref|NM_185091.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.6
14ref|NM_195062.1| Oryza sativa (japonica cultivar-group) unknown ... 40 6.6
15ref|NM_191109.1| Oryza sativa (japonica cultivar-group), predic... 40 6.6
16ref|XM_472770.1| Oryza sativa (japonica cultivar-group), predic... 40 6.6
17gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 6.6
18gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 6.6
19gb|AY456696.1| Arthrobacter aurescens strain TC1 plasmid pAA1 at... 40 6.6
20gb|AC147557.4| Mus musculus BAC clone RP23-452M8 from chromosome... 40 6.6
21gb|BT014352.1| Lycopersicon esculentum clone 133629F, mRNA sequence 40 6.6
22gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, c... 40 6.6
23gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.6
24ref|XM_842690.1| Leishmania major strain Friedlin hypothetical p... 40 6.6
25emb|CT009528.9| M.truncatula DNA sequence from clone MTH2-168J23... 40 6.6
26ref|XM_572267.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 6.6
27gb|AC116319.4| Mus musculus BAC clone RP23-265J2 from chromosome... 40 6.6
28gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome 40 6.6
29gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 1... 40 6.6
30gb|AC137989.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.6
31gb|BT009335.1| Triticum aestivum clone wlm4.pk0009.a8:fis, full ... 40 6.6
32gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genom... 40 6.6
33emb|BX842605.1|OSJN00299 Oryza sativa genomic DNA, chromosome 4,... 40 6.6
34emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete ... 40 6.6
35emb|AL663017.3|OSJN00149 Oryza sativa genomic DNA, chromosome 4,... 40 6.6
36gb|AF425990.1| Streptomyces coelicolor A3(2) putative oxidoreduc... 40 6.6
37gb|AC103891.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.6
38dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 6.6
39gb|AC090488.3| Genomic sequence for Oryza sativa, Nipponbare str... 40 6.6
40gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare str... 40 6.6
41dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
42dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
43dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
44dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
45dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
46gb|AC017079.5| Homo sapiens BAC clone RP11-462M9 from 2, complet... 40 6.6
47gb|AE004479.1| Pseudomonas aeruginosa PAO1, section 40 of 529 of... 40 6.6
48gb|AC133778.4| Oryza sativa chromosome 3 BAC OSJNBb0027B08 genom... 40 6.6
49gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.6
50gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.6
51gb|AC137698.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 6.6
52dbj|AP003446.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
53dbj|AP003565.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
54dbj|AK121907.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.6
55dbj|AK119417.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.6
56dbj|AK110980.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.6
57dbj|AK072267.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.6
58dbj|AK071173.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.6
59dbj|AK064921.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.6
60dbj|AK059730.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.6
61emb|AL512547.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 6.6
62dbj|AB090307.1| Bombyx mori Bmfkbp13, Bmhepa, Bmhig, Bm6922, Bml... 40 6.6
63gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 6.6
64gb|DQ235693.1| Acinetobacter baumannii MexA-like protein (mexA) ... 40 6.6
65gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 6.6
66gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.6
67gb|L11616.1|PSEENVCD Pseudomonas aeruginosa mexA and mexB genes,... 40 6.6
68dbj|AP003112.1| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 6.6
69dbj|AP003111.1| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 6.6 
>ref|XM_478288.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1065

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 172 ggcgccgccgccggcgcagcgccctc 197
           |||| |||||||||||||||||||||
Sbjct: 305 ggcggcgccgccggcgcagcgccctc 280
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 172      ggcgccgccgccggcgcagcgccctc 197
                |||| |||||||||||||||||||||
Sbjct: 19015035 ggcggcgccgccggcgcagcgccctc 19015010
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 142     gccggagacgaggagcaggagg 163
               ||||||||||||||||||||||
Sbjct: 4968090 gccggagacgaggagcaggagg 4968069



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 165     cgagggaggcgccgccgccgg 185
               |||||||||||||||||||||
Sbjct: 7562007 cgagggaggcgccgccgccgg 7561987
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>dbj|AP005186.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0430F03
          Length = 183095

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 172    ggcgccgccgccggcgcagcgccctc 197
              |||| |||||||||||||||||||||
Sbjct: 117020 ggcggcgccgccggcgcagcgccctc 116995
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>ref|NM_196537.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0053G13.11), mRNA
          Length = 645

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 169 ggaggcgccgccgccggcgcagcgc 193
           |||||||||||||||| ||||||||
Sbjct: 29  ggaggcgccgccgccgacgcagcgc 53
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>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29
          Length = 283100

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 165    cgagggaggcgccgccgccgg 185
              |||||||||||||||||||||
Sbjct: 259897 cgagggaggcgccgccgccgg 259917
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>ref|XM_683633.1| PREDICTED: Danio rerio hypothetical protein LOC553397 (LOC553397),
           mRNA
          Length = 759

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 151 gaggagcaggagggcgaggga 171
           |||||||||||||||||||||
Sbjct: 89  gaggagcaggagggcgaggga 109
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 169      ggaggcgccgccgccggcgcagcgc 193
                |||||||||||||||| ||||||||
Sbjct: 14325054 ggaggcgccgccgccgacgcagcgc 14325030



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 191     cgccctcggctcacgcgcgccgga 214
               |||||||||||| |||||||||||
Sbjct: 4451334 cgccctcggctcccgcgcgccgga 4451357
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>gb|AC027662.2|AC027662 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0053G13,
             complete sequence
          Length = 138245

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 169   ggaggcgccgccgccggcgcagcgc 193
             |||||||||||||||| ||||||||
Sbjct: 72329 ggaggcgccgccgccgacgcagcgc 72305
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>dbj|AK066224.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056G10, full
           insert sequence
          Length = 4304

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 169 ggaggcgccgccgccggcgcagcgc 193
           |||||||||||||||| ||||||||
Sbjct: 124 ggaggcgccgccgccgacgcagcgc 148
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 169      ggaggcgccgccgccggcgcagcgc 193
                |||||||||||||||| ||||||||
Sbjct: 14333296 ggaggcgccgccgccgacgcagcgc 14333272



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 191     cgccctcggctcacgcgcgccgga 214
               |||||||||||| |||||||||||
Sbjct: 4452155 cgccctcggctcccgcgcgccgga 4452178
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>gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence
          Length = 491611

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 150    cgaggagcaggagggcgagg 169
              ||||||||||||||||||||
Sbjct: 216518 cgaggagcaggagggcgagg 216499
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>ref|NM_185091.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 522

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 172 ggcgccgccgccggcgcagcgccc 195
           ||||||||||||| ||||||||||
Sbjct: 475 ggcgccgccgccgccgcagcgccc 498
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>ref|NM_195062.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBb0081F12.23), mRNA
          Length = 357

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 191 cgccctcggctcacgcgcgccgga 214
           |||||||||||| |||||||||||
Sbjct: 108 cgccctcggctcccgcgcgccgga 131
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>ref|NM_191109.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1941

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 162 gggcgagggaggcgccgccgccggcgcagcgc 193
           |||| |||||||||||||||||| ||| ||||
Sbjct: 658 gggcaagggaggcgccgccgccgccgccgcgc 627
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>ref|XM_472770.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 759

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 76 cccgccgtccgtcgccgccg 95
          ||||||||||||||||||||
Sbjct: 24 cccgccgtccgtcgccgccg 5
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>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete
              sequence
          Length = 1194300

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    caggagggcgagggaggcgc 176
              ||||||||||||||||||||
Sbjct: 976117 caggagggcgagggaggcgc 976136
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 154     gagcaggagggcgagggaggcgccgccg 181
               ||||| ||||||||||| ||||||||||
Sbjct: 1423032 gagcacgagggcgagggcggcgccgccg 1423005
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>gb|AY456696.1| Arthrobacter aurescens strain TC1 plasmid pAA1 atrazine catabolic
             region, partial sequence
          Length = 161264

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                         
Query: 174   cgccgccgccggcgcag-cgccctcggc 200
             ||||||||||||||||| ||||||||||
Sbjct: 53542 cgccgccgccggcgcagtcgccctcggc 53569
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>gb|AC147557.4| Mus musculus BAC clone RP23-452M8 from chromosome 14, complete
            sequence
          Length = 174133

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 301  acaaaacaatgttatgcaattaaa 324
            |||||||||||||| |||||||||
Sbjct: 5678 acaaaacaatgttaagcaattaaa 5701
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>gb|BT014352.1| Lycopersicon esculentum clone 133629F, mRNA sequence
          Length = 1303

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 273 ccacattccagaatccagca 292
           ||||||||||||||||||||
Sbjct: 924 ccacattccagaatccagca 943
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>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence
          Length = 1212674

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 77     ccgccgtccgtcgccgccgg 96
              ||||||||||||||||||||
Sbjct: 473385 ccgccgtccgtcgccgccgg 473404
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 172      ggcgccgccgccggcgcagcgccc 195
                ||||||||||||| ||||||||||
Sbjct: 34579972 ggcgccgccgccgccgcagcgccc 34579949



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 169     ggaggcgccgccgccggcgc 188
               ||||||||||||||||||||
Sbjct: 9332321 ggaggcgccgccgccggcgc 9332302



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 173     gcgccgccgccggcgcagcg 192
               ||||||||||||||||||||
Sbjct: 6992638 gcgccgccgccggcgcagcg 6992657
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>ref|XM_842690.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0760)
           partial mRNA
          Length = 1797

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  ccgccgtccgtcgccgccgg 96
           ||||||||||||||||||||
Sbjct: 862 ccgccgtccgtcgccgccgg 881
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>emb|CT009528.9| M.truncatula DNA sequence from clone MTH2-168J23 on chromosome 3,
             complete sequence
          Length = 129215

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 300   tacaaaacaatgttatgcaa 319
             ||||||||||||||||||||
Sbjct: 80592 tacaaaacaatgttatgcaa 80611
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>ref|XM_572267.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
            (CNH00750) partial mRNA
          Length = 2346

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 157  caggagggcgagggaggcgc 176
            ||||||||||||||||||||
Sbjct: 1425 caggagggcgagggaggcgc 1444
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>gb|AC116319.4| Mus musculus BAC clone RP23-265J2 from chromosome 14, complete sequence
          Length = 170494

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 301   acaaaacaatgttatgcaattaaa 324
             |||||||||||||| |||||||||
Sbjct: 68886 acaaaacaatgttaagcaattaaa 68863
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>gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome
          Length = 241087

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 173    gcgccgccgccggcgcagcg 192
              ||||||||||||||||||||
Sbjct: 130145 gcgccgccgccggcgcagcg 130126
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>gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBb0074K09,
              complete sequence
          Length = 135363

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 169    ggaggcgccgccgccggcgc 188
              ||||||||||||||||||||
Sbjct: 122235 ggaggcgccgccgccggcgc 122254
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>gb|AC137989.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBb0050G15, complete sequence
          Length = 152556

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 169  ggaggcgccgccgccggcgc 188
            ||||||||||||||||||||
Sbjct: 8142 ggaggcgccgccgccggcgc 8161
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>gb|BT009335.1| Triticum aestivum clone wlm4.pk0009.a8:fis, full insert mRNA
           sequence
          Length = 1660

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 267 tcaagaccacattccagaat 286
           ||||||||||||||||||||
Sbjct: 193 tcaagaccacattccagaat 212
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>gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genomic sequence, complete
             sequence
          Length = 164236

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 172   ggcgccgccgccggcgcagcgccc 195
             ||||||||||||| ||||||||||
Sbjct: 37689 ggcgccgccgccgccgcagcgccc 37666
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>emb|BX842605.1|OSJN00299 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1358B12, complete
              sequence
          Length = 131246

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 76     cccgccgtccgtcgccgccg 95
              ||||||||||||||||||||
Sbjct: 107971 cccgccgtccgtcgccgccg 107990
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>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29
          Length = 299050

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 135    ccatgccgccggagacgaggagca 158
              |||||||||||||| |||||||||
Sbjct: 150282 ccatgccgccggaggcgaggagca 150305
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>emb|AL663017.3|OSJN00149 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060P14,
            complete sequence
          Length = 139418

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 76   cccgccgtccgtcgccgccg 95
            ||||||||||||||||||||
Sbjct: 1968 cccgccgtccgtcgccgccg 1987
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>gb|AF425990.1| Streptomyces coelicolor A3(2) putative oxidoreductase (ecaD1) gene,
            complete cds; and putative transport integral membrane
            protein (ecaD2) gene, partial cds
          Length = 2558

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 135  ccatgccgccggagacgaggagca 158
            |||||||||||||| |||||||||
Sbjct: 2335 ccatgccgccggaggcgaggagca 2312
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>gb|AC103891.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1175C11,
             complete sequence
          Length = 123620

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   gcgccgccgccggcgcagcg 192
             ||||||||||||||||||||
Sbjct: 89727 gcgccgccgccggcgcagcg 89708
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 171     aggcgccgccgccggcgcag 190
               ||||||||||||||||||||
Sbjct: 4301507 aggcgccgccgccggcgcag 4301488
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>gb|AC090488.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0081F12
              from chromosome 10, complete sequence
          Length = 128388

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 191    cgccctcggctcacgcgcgccgga 214
              |||||||||||| |||||||||||
Sbjct: 112942 cgccctcggctcccgcgcgccgga 112965
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>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0002D01, from chromosome 3, complete sequence
          Length = 187589

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 169   ggaggcgccgccgccggcgc 188
             ||||||||||||||||||||
Sbjct: 29721 ggaggcgccgccgccggcgc 29702
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 76       cccgccgtccgtcgccgccg 95
                ||||||||||||||||||||
Sbjct: 23111631 cccgccgtccgtcgccgccg 23111650
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 169     ggaggcgccgccgccggcgc 188
               ||||||||||||||||||||
Sbjct: 6066152 ggaggcgccgccgccggcgc 6066171
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 172      ggcgccgccgccggcgcagc 191
                ||||||||||||||||||||
Sbjct: 26312683 ggcgccgccgccggcgcagc 26312702
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 172      ggcgccgccgccggcgcagcgccc 195
                ||||||||||||| ||||||||||
Sbjct: 34670044 ggcgccgccgccgccgcagcgccc 34670021



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 169     ggaggcgccgccgccggcgc 188
               ||||||||||||||||||||
Sbjct: 9330216 ggaggcgccgccgccggcgc 9330197



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 173     gcgccgccgccggcgcagcg 192
               ||||||||||||||||||||
Sbjct: 6990533 gcgccgccgccggcgcagcg 6990552
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 162      gggcgagggaggcgccgccgccggcgcagcgc 193
                |||| |||||||||||||||||| ||| ||||
Sbjct: 34940541 gggcaagggaggcgccgccgccgccgccgcgc 34940510
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>gb|AC017079.5| Homo sapiens BAC clone RP11-462M9 from 2, complete sequence
          Length = 176075

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    ccgtcgccgccgggagagcg 103
             ||||||||||||||||||||
Sbjct: 79922 ccgtcgccgccgggagagcg 79903
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>gb|AE004479.1| Pseudomonas aeruginosa PAO1, section 40 of 529 of the complete genome
          Length = 13987

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 170  gaggcgccgccgccggcgca 189
            ||||||||||||||||||||
Sbjct: 8225 gaggcgccgccgccggcgca 8244
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>gb|AC133778.4| Oryza sativa chromosome 3 BAC OSJNBb0027B08 genomic sequence, complete
             sequence
          Length = 129302

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 172   ggcgccgccgccggcgcagcgccc 195
             ||||||||||||| ||||||||||
Sbjct: 63361 ggcgccgccgccgccgcagcgccc 63384
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 169     ggaggcgccgccgccggcgc 188
               ||||||||||||||||||||
Sbjct: 2117924 ggaggcgccgccgccggcgc 2117943
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>gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1017C11,
              complete sequence
          Length = 166072

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 173    gcgccgccgccggcgcagcg 192
              ||||||||||||||||||||
Sbjct: 159235 gcgccgccgccggcgcagcg 159254
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>gb|AC137698.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0014A21, from chromosome 3, complete sequence
          Length = 134014

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   ggaggcgccgccgccggcgc 188
             ||||||||||||||||||||
Sbjct: 23870 ggaggcgccgccgccggcgc 23889
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>dbj|AP003446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1529_G03
          Length = 100635

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 162   gggcgagggaggcgccgccgccggcgcagcgc 193
             |||| |||||||||||||||||| ||| ||||
Sbjct: 69905 gggcaagggaggcgccgccgccgccgccgcgc 69874
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>dbj|AP003565.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0085J13
          Length = 130185

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   ggcgccgccgccggcgcagc 191
             ||||||||||||||||||||
Sbjct: 10410 ggcgccgccgccggcgcagc 10429
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>dbj|AK121907.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105N05, full
           insert sequence
          Length = 1076

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 191 cgccctcggctcacgcgcgccgga 214
           |||||||||||| |||||||||||
Sbjct: 156 cgccctcggctcccgcgcgccgga 179
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>dbj|AK119417.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-G06, full
            insert sequence
          Length = 3219

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 76   cccgccgtccgtcgccgccg 95
            ||||||||||||||||||||
Sbjct: 2840 cccgccgtccgtcgccgccg 2859
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>dbj|AK110980.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-C08, full
           insert sequence
          Length = 1456

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 gcgccgccgccggcgcagcg 192
           ||||||||||||||||||||
Sbjct: 198 gcgccgccgccggcgcagcg 217
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>dbj|AK072267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004I18, full
           insert sequence
          Length = 1822

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 ggaggcgccgccgccggcgc 188
           ||||||||||||||||||||
Sbjct: 529 ggaggcgccgccgccggcgc 548
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>dbj|AK071173.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082F07, full
           insert sequence
          Length = 828

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 172 ggcgccgccgccggcgcagcgccc 195
           ||||||||||||| ||||||||||
Sbjct: 488 ggcgccgccgccgccgcagcgccc 511
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>dbj|AK064921.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000N08, full
           insert sequence
          Length = 2413

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 162 gggcgagggaggcgccgccgccggcgcagcgc 193
           |||| |||||||||||||||||| ||| ||||
Sbjct: 667 gggcaagggaggcgccgccgccgccgccgcgc 636
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>dbj|AK059730.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-F09, full
           insert sequence
          Length = 1026

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 76  cccgccgtccgtcgccgccg 95
           ||||||||||||||||||||
Sbjct: 127 cccgccgtccgtcgccgccg 108
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>emb|AL512547.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0812A04, complete
             sequence
          Length = 43144

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    cccgccgtccgtcgccgccg 95
             ||||||||||||||||||||
Sbjct: 32551 cccgccgtccgtcgccgccg 32570
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>dbj|AB090307.1| Bombyx mori Bmfkbp13, Bmhepa, Bmhig, Bm6922, Bmlap, Bmprojectin,
             Bmkettin, Bmtitin1 genes, partial and complete cds
          Length = 160000

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 174   cgccgccgccggcgcagcgc 193
             ||||||||||||||||||||
Sbjct: 93583 cgccgccgccggcgcagcgc 93602
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 174     cgccgccgccggcgcagcgc 193
               ||||||||||||||||||||
Sbjct: 1174839 cgccgccgccggcgcagcgc 1174820
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>gb|DQ235693.1| Acinetobacter baumannii MexA-like protein (mexA) gene, complete
           sequence
          Length = 1175

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 170 gaggcgccgccgccggcgca 189
           ||||||||||||||||||||
Sbjct: 82  gaggcgccgccgccggcgca 101
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 173     gcgccgccgccggcgcagcg 192
               ||||||||||||||||||||
Sbjct: 1771544 gcgccgccgccggcgcagcg 1771563
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 169     ggaggcgccgccgccggcgc 188
               ||||||||||||||||||||
Sbjct: 6132619 ggaggcgccgccgccggcgc 6132638
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>gb|L11616.1|PSEENVCD Pseudomonas aeruginosa mexA and mexB genes, complete cds and outer
           membrane protein (oprM) gene, partial cds
          Length = 5600

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 170 gaggcgccgccgccggcgca 189
           ||||||||||||||||||||
Sbjct: 484 gaggcgccgccgccggcgca 503
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>dbj|AP003112.1| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1288E10
          Length = 144703

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 281   cagaatccagcaagttcagt 300
             ||||||||||||||||||||
Sbjct: 89990 cagaatccagcaagttcagt 89971
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>dbj|AP003111.1| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1255G1
          Length = 171035

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 281   cagaatccagcaagttcagt 300
             ||||||||||||||||||||
Sbjct: 12543 cagaatccagcaagttcagt 12524


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,330,443
Number of Sequences: 3902068
Number of extensions: 3330443
Number of successful extensions: 90748
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 88183
Number of HSP's gapped (non-prelim): 2566
length of query: 491
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 469
effective length of database: 17,147,199,772
effective search space: 8042036693068
effective search space used: 8042036693068
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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