ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl30d05 |
|---|---|
| Clone Library Name | barley_pub |
>ATX1_ARATH (Q9C5X4) Histone-lysine N-methyltransferase, H3 lysine-4 specific| ATX1 (EC 2.1.1.43) (H3-K4-HMTase) (Trithorax-homolog protein 1) (TRX-homolog protein 1) (Protein SET DOMAIN GROUP 27) Length = 1062 Score = 164 bits (416), Expect = 9e-41 Identities = 84/155 (54%), Positives = 109/155 (70%), Gaps = 3/155 (1%) Frame = +1 Query: 4 ERIQFSISSEEMKCLNLKFGTSNL--DKQGYDELLALAVSFHDYQGLDPDDLVWAKITGH 177 E I+F +S EEM+ L+LKF TSN+ D + YDE++ LA + + Q +P D+VWAK+ GH Sbjct: 253 EMIKFLVSREEMELLHLKFCTSNVTVDGRDYDEMVVLAATLDECQDFEPGDIVWAKLAGH 312 Query: 178 AMWPAVIVDESNVPSSRALK-PIRLDQSILVQFFGTHDFARIKSKQAVPFLSGLLSSLHL 354 AMWPAVIVDES + + L + S+LVQFFGTHDFARIK KQA+ F+ GLLS HL Sbjct: 313 AMWPAVIVDESIIGERKGLNNKVSGGGSLLVQFFGTHDFARIKVKQAISFIKGLLSPSHL 372 Query: 355 KCKQTRFSRGLEEAKEFLLTQQLPENMLQLRKSIE 459 KCKQ RF G++EAK +L +LPE M QL+K + Sbjct: 373 KCKQPRFEEGMQEAKMYLKAHRLPERMSQLQKGAD 407
>ATX2_ARATH (Q9MA43) Histone-lysine N-methyltransferase ATX2 (EC 2.1.1.43)| (Trithorax-homolog protein 2) (TRX-homolog protein 2) (Protein SET DOMAIN GROUP 30) Length = 1193 Score = 115 bits (289), Expect = 5e-26 Identities = 57/109 (52%), Positives = 79/109 (72%), Gaps = 3/109 (2%) Frame = +1 Query: 4 ERIQFSISSEEMKCLNLKFGTSNL--DKQGYDELLALAVSFHDYQGLDPDDLVWAKITGH 177 E+I+F IS ++M+ LN+KFGT+++ D Q YDEL+ LA SF + Q +P D++WAK+TGH Sbjct: 264 EKIKFLISRDDMELLNMKFGTNDVVVDGQDYDELVILAASFEECQDFEPRDIIWAKLTGH 323 Query: 178 AMWPAVIVDESNVPSSRAL-KPIRLDQSILVQFFGTHDFARIKSKQAVP 321 AMWPA+IVDES + + L I +S+LVQFFGTHDFAR + +P Sbjct: 324 AMWPAIIVDESVIVKRKGLNNKISGGRSVLVQFFGTHDFARYLKEYKLP 372
>MES4_DROME (Q8MT36) Probable histone methyltransferase Mes-4 (Maternal-effect| sterile 4) Length = 1427 Score = 55.5 bits (132), Expect = 7e-08 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 2/89 (2%) Frame = +1 Query: 148 DLVWAKITGHAMWPAVIVDESNVPSSRALKPIRLDQSILVQFFGTHDFARIKSKQAVPFL 327 ++VWAK WPA+I+ + VPS+ LK + +V+FFGTHD I ++ ++ Sbjct: 1051 EIVWAKFNNFRWWPAIILPPTEVPSN-ILKKAHGENDFVVRFFGTHDHGWISRRRVYLYI 1109 Query: 328 SGLLSSLHLKCKQ--TRFSRGLEEAKEFL 408 G H Q ++ G+EEA FL Sbjct: 1110 EGDTGDGHKTKSQLFRNYTTGVEEASRFL 1138
>YAE1_SCHPO (Q09842) Hypothetical PWWP domain protein C23D3.01| Length = 407 Score = 40.0 bits (92), Expect = 0.003 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%) Frame = +1 Query: 148 DLVWAKITGHAMWPAVIVDESNVPSS---RALKPIRLDQSILVQFFGTHDFARIKSKQAV 318 + V AK++ WPA + + ++P+ R + R+D I VQF + D+A I S + Sbjct: 65 EYVLAKMSSFPWWPARVASQKSIPTEVRERLKRNFRMDNGIFVQFLPSRDYAIISSSNVL 124 Query: 319 P 321 P Sbjct: 125 P 125
>DNM3A_HUMAN (Q9Y6K1) DNA (cytosine-5)-methyltransferase 3A (EC 2.1.1.37)| (Dnmt3a) (DNA methyltransferase HsaIIIA) (DNA MTase HsaIIIA) (M.HsaIIIA) Length = 909 Score = 39.3 bits (90), Expect = 0.006 Identities = 30/97 (30%), Positives = 43/97 (44%) Frame = +1 Query: 61 GTSNLDKQGYDELLALAVSFHDYQGLDPDDLVWAKITGHAMWPAVIVDESNVPSSRALKP 240 G N K G DE + D +G +LVW K+ G + WP IV SRA + Sbjct: 267 GDKNATKAGDDE-----PEYEDGRGFGIGELVWGKLRGFSWWPGRIVSWWMTGRSRAAEG 321 Query: 241 IRLDQSILVQFFGTHDFARIKSKQAVPFLSGLLSSLH 351 R V +FG F+ + ++ +P LS S+ H Sbjct: 322 TR-----WVMWFGDGKFSVVCVEKLMP-LSSFCSAFH 352
>DNM3B_MOUSE (O88509) DNA (cytosine-5)-methyltransferase 3B (EC 2.1.1.37)| (Dnmt3b) (DNA methyltransferase MmuIIIB) (DNA MTase MmuIIIB) (M.MmuIIIB) Length = 859 Score = 38.1 bits (87), Expect = 0.012 Identities = 21/70 (30%), Positives = 34/70 (48%) Frame = +1 Query: 109 AVSFHDYQGLDPDDLVWAKITGHAMWPAVIVDESNVPSSRALKPIRLDQSILVQFFGTHD 288 + + D + DLVW KI G + WPA++V +A+ +R VQ+FG Sbjct: 221 STEYQDDKEFGIGDLVWGKIKGFSWWPAMVVSWKATSKRQAMPGMR-----WVQWFGDGK 275 Query: 289 FARIKSKQAV 318 F+ I + + V Sbjct: 276 FSEISADKLV 285
>DNM3B_HUMAN (Q9UBC3) DNA (cytosine-5)-methyltransferase 3B (EC 2.1.1.37)| (Dnmt3b) (DNA methyltransferase HsaIIIB) (DNA MTase HsaIIIB) (M.HsaIIIB) Length = 853 Score = 37.7 bits (86), Expect = 0.016 Identities = 19/57 (33%), Positives = 30/57 (52%) Frame = +1 Query: 148 DLVWAKITGHAMWPAVIVDESNVPSSRALKPIRLDQSILVQFFGTHDFARIKSKQAV 318 DLVW KI G + WPA++V +A+ +R VQ+FG F+ + + + V Sbjct: 227 DLVWGKIKGFSWWPAMVVSWKATSKRQAMSGMR-----WVQWFGDGKFSEVSADKLV 278
>PSIP1_HUMAN (O75475) PC4 and SFRS1-interacting protein (Lens epithelium-derived| growth factor) (Transcriptional coactivator p75/p52) (Dense fine speckles 70 kDa protein) (DFS 70) (CLL-associated antigen KW-7) Length = 530 Score = 37.4 bits (85), Expect = 0.021 Identities = 25/61 (40%), Positives = 35/61 (57%) Frame = +1 Query: 142 PDDLVWAKITGHAMWPAVIVDESNVPSSRALKPIRLDQSILVQFFGTHDFARIKSKQAVP 321 P DL++AK+ G+ WPA VDE VP A+KP + + FFGTH+ A + K P Sbjct: 7 PGDLIFAKMKGYPHWPA-RVDE--VPDG-AVKP--PTNKLPIFFFGTHETAFLGPKDIFP 60 Query: 322 F 324 + Sbjct: 61 Y 61
>PSIP1_FELCA (Q66T72) PC4 and SFRS1-interacting protein (Lens epithelium-derived| growth factor) (Transcription coactivator p75) (LEDGF/p75) Length = 530 Score = 37.4 bits (85), Expect = 0.021 Identities = 25/61 (40%), Positives = 35/61 (57%) Frame = +1 Query: 142 PDDLVWAKITGHAMWPAVIVDESNVPSSRALKPIRLDQSILVQFFGTHDFARIKSKQAVP 321 P DL++AK+ G+ WPA VDE VP A+KP + + FFGTH+ A + K P Sbjct: 7 PGDLIFAKMKGYPHWPA-RVDE--VPDG-AVKP--PTNKLPIFFFGTHETAFLGPKDIFP 60 Query: 322 F 324 + Sbjct: 61 Y 61
>PSIP1_RAT (Q812D1) PC4 and SFRS1-interacting protein (Lens epithelium-derived| growth factor) Length = 528 Score = 37.4 bits (85), Expect = 0.021 Identities = 25/61 (40%), Positives = 35/61 (57%) Frame = +1 Query: 142 PDDLVWAKITGHAMWPAVIVDESNVPSSRALKPIRLDQSILVQFFGTHDFARIKSKQAVP 321 P DL++AK+ G+ WPA VDE VP A+KP + + FFGTH+ A + K P Sbjct: 7 PGDLIFAKMKGYPHWPA-RVDE--VPDG-AVKP--PTNKLPIFFFGTHETAFLGPKDIFP 60 Query: 322 F 324 + Sbjct: 61 Y 61
>PSIP1_MOUSE (Q99JF8) PC4 and SFRS1-interacting protein (Lens epithelium-derived| growth factor) Length = 528 Score = 37.4 bits (85), Expect = 0.021 Identities = 25/61 (40%), Positives = 35/61 (57%) Frame = +1 Query: 142 PDDLVWAKITGHAMWPAVIVDESNVPSSRALKPIRLDQSILVQFFGTHDFARIKSKQAVP 321 P DL++AK+ G+ WPA VDE VP A+KP + + FFGTH+ A + K P Sbjct: 7 PGDLIFAKMKGYPHWPA-RVDE--VPDG-AVKP--PTNKLPIFFFGTHETAFLGPKDIFP 60 Query: 322 F 324 + Sbjct: 61 Y 61
>PSIP1_CHICK (Q5XXA9) Lens epithelium-derived growth factor| Length = 579 Score = 37.4 bits (85), Expect = 0.021 Identities = 26/61 (42%), Positives = 34/61 (55%) Frame = +1 Query: 142 PDDLVWAKITGHAMWPAVIVDESNVPSSRALKPIRLDQSILVQFFGTHDFARIKSKQAVP 321 P DL++AK+ G+ WPA VDE VP A+KP I FFGTH+ A + K P Sbjct: 7 PGDLIFAKMKGYPHWPA-RVDE--VPDG-AVKPPTNKMPIF--FFGTHETAFLGPKDIFP 60 Query: 322 F 324 + Sbjct: 61 Y 61
>DNM3A_MOUSE (O88508) DNA (cytosine-5)-methyltransferase 3A (EC 2.1.1.37)| (Dnmt3a) (DNA methyltransferase MmuIIIA) (DNA MTase MmuIIIA) (M.MmuIIIA) Length = 908 Score = 37.0 bits (84), Expect = 0.027 Identities = 29/97 (29%), Positives = 42/97 (43%) Frame = +1 Query: 61 GTSNLDKQGYDELLALAVSFHDYQGLDPDDLVWAKITGHAMWPAVIVDESNVPSSRALKP 240 G N K DE + D +G +LVW K+ G + WP IV SRA + Sbjct: 266 GDKNATKAADDE-----PEYEDGRGFGIGELVWGKLRGFSWWPGRIVSWWMTGRSRAAEG 320 Query: 241 IRLDQSILVQFFGTHDFARIKSKQAVPFLSGLLSSLH 351 R V +FG F+ + ++ +P LS S+ H Sbjct: 321 TR-----WVMWFGDGKFSVVCVEKLMP-LSSFCSAFH 351
>NSD1_HUMAN (Q96L73) Histone-lysine N-methyltransferase, H3 lysine-36 and H4| lysine-20 specific (EC 2.1.1.43) (H3-K36-HMTase) (H4-K20-HMTase) (Nuclear receptor binding SET domain containing protein 1) (NR-binding SET domain containing protein) (Androgen r Length = 2696 Score = 36.6 bits (83), Expect = 0.036 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = +1 Query: 148 DLVWAKITGHAMWPAVIVDESNVPSSRALKPIRLD-QSILVQFFGTHDFARIKSKQAVPF 324 ++VW K+ + WPA I VPS+ + +R D V FFG++D+ + P+ Sbjct: 1758 EIVWVKVGRYRWWPAEICHPRAVPSN--IDKMRHDVGEFPVLFFGSNDYLWTHQARVFPY 1815 Query: 325 LSGLLSS 345 + G +SS Sbjct: 1816 MEGDVSS 1822
>NSD1_MOUSE (O88491) Histone-lysine N-methyltransferase, H3 lysine-36 and H4| lysine-20 specific (EC 2.1.1.43) (H3-K36-HMTase) (H4-K20-HMTase) (Nuclear receptor binding SET domain containing protein 1) (NR-binding SET domain containing protein) Length = 2588 Score = 36.6 bits (83), Expect = 0.036 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = +1 Query: 148 DLVWAKITGHAMWPAVIVDESNVPSSRALKPIRLD-QSILVQFFGTHDFARIKSKQAVPF 324 ++VW K+ + WPA I VPS+ + +R D V FFG++D+ + P+ Sbjct: 1656 EIVWVKVGRYRWWPAEICHPRAVPSN--IDKMRHDVGEFPVLFFGSNDYLWTHQARVFPY 1713 Query: 325 LSGLLSS 345 + G +SS Sbjct: 1714 MEGDVSS 1720
>BRPF3_HUMAN (Q9ULD4) Bromodomain and PHD finger-containing protein 3| Length = 1205 Score = 35.8 bits (81), Expect = 0.061 Identities = 15/34 (44%), Positives = 23/34 (67%) Frame = +1 Query: 103 ALAVSFHDYQGLDPDDLVWAKITGHAMWPAVIVD 204 +L + F D L+P +LVWAK G+ +PA+I+D Sbjct: 1063 SLLLPFEDRGDLEPLELVWAKCRGYPSYPALIID 1096
>HDGR3_HUMAN (Q9Y3E1) Hepatoma-derived growth factor-related protein 3 (HRP-3)| (Hepatoma-derived growth factor 2) Length = 203 Score = 33.9 bits (76), Expect = 0.23 Identities = 23/59 (38%), Positives = 31/59 (52%) Frame = +1 Query: 148 DLVWAKITGHAMWPAVIVDESNVPSSRALKPIRLDQSILVQFFGTHDFARIKSKQAVPF 324 DLV+AK+ G+ WPA I +P A+KP I FFGTH+ A + K P+ Sbjct: 13 DLVFAKMKGYPHWPARI---DELPEG-AVKPPANKYPIF--FFGTHETAFLGPKDLFPY 65
>HDGR3_RAT (Q923W4) Hepatoma-derived growth factor-related protein 3 (HRP-3)| Length = 202 Score = 33.9 bits (76), Expect = 0.23 Identities = 23/59 (38%), Positives = 31/59 (52%) Frame = +1 Query: 148 DLVWAKITGHAMWPAVIVDESNVPSSRALKPIRLDQSILVQFFGTHDFARIKSKQAVPF 324 DLV+AK+ G+ WPA I +P A+KP I FFGTH+ A + K P+ Sbjct: 13 DLVFAKMKGYPHWPARI---DELPEG-AVKPPANKYPIF--FFGTHETAFLGPKDLFPY 65
>HDGR3_MOUSE (Q9JMG7) Hepatoma-derived growth factor-related protein 3 (HRP-3)| Length = 202 Score = 33.9 bits (76), Expect = 0.23 Identities = 23/59 (38%), Positives = 31/59 (52%) Frame = +1 Query: 148 DLVWAKITGHAMWPAVIVDESNVPSSRALKPIRLDQSILVQFFGTHDFARIKSKQAVPF 324 DLV+AK+ G+ WPA I +P A+KP I FFGTH+ A + K P+ Sbjct: 13 DLVFAKMKGYPHWPARI---DELPEG-AVKPPANKYPIF--FFGTHETAFLGPKDLFPY 65
>HDGF_RAT (Q8VHK7) Hepatoma-derived growth factor (HDGF)| Length = 237 Score = 32.7 bits (73), Expect = 0.52 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 2/61 (3%) Frame = +1 Query: 148 DLVWAKITGHAMWPAVI--VDESNVPSSRALKPIRLDQSILVQFFGTHDFARIKSKQAVP 321 DLV+AK+ G+ WPA I + E+ V S+ V FFGTH+ A + K P Sbjct: 14 DLVFAKMKGYPHWPARIDEMPEAAVKSTA--------NKYQVFFFGTHETAFLGPKDLFP 65 Query: 322 F 324 + Sbjct: 66 Y 66
>HDGF_MOUSE (P51859) Hepatoma-derived growth factor (HDGF)| Length = 237 Score = 32.7 bits (73), Expect = 0.52 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 2/61 (3%) Frame = +1 Query: 148 DLVWAKITGHAMWPAVI--VDESNVPSSRALKPIRLDQSILVQFFGTHDFARIKSKQAVP 321 DLV+AK+ G+ WPA I + E+ V S+ V FFGTH+ A + K P Sbjct: 14 DLVFAKMKGYPHWPARIDEMPEAAVKSTA--------NKYQVFFFGTHETAFLGPKDLFP 65 Query: 322 F 324 + Sbjct: 66 Y 66
>HDGF_HUMAN (P51858) Hepatoma-derived growth factor (HDGF) (High-mobility group| protein 1-like 2) (HMG-1L2) Length = 240 Score = 32.7 bits (73), Expect = 0.52 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 2/61 (3%) Frame = +1 Query: 148 DLVWAKITGHAMWPAVI--VDESNVPSSRALKPIRLDQSILVQFFGTHDFARIKSKQAVP 321 DLV+AK+ G+ WPA I + E+ V S+ V FFGTH+ A + K P Sbjct: 14 DLVFAKMKGYPHWPARIDEMPEAAVKSTA--------NKYQVFFFGTHETAFLGPKDLFP 65 Query: 322 F 324 + Sbjct: 66 Y 66
>HDGF_BOVIN (Q9XSK7) Hepatoma-derived growth factor (HDGF)| Length = 239 Score = 32.7 bits (73), Expect = 0.52 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 2/61 (3%) Frame = +1 Query: 148 DLVWAKITGHAMWPAVI--VDESNVPSSRALKPIRLDQSILVQFFGTHDFARIKSKQAVP 321 DLV+AK+ G+ WPA I + E+ V S+ V FFGTH+ A + K P Sbjct: 14 DLVFAKMKGYPHWPARIDEMPEAAVKSTA--------NKYQVFFFGTHETAFLGPKDLFP 65 Query: 322 F 324 + Sbjct: 66 Y 66
>ZMY11_HUMAN (Q15326) Zinc finger MYND domain-containing protein 11 (Adenovirus| 5 E1A-binding protein) (BS69 protein) Length = 562 Score = 32.3 bits (72), Expect = 0.67 Identities = 19/77 (24%), Positives = 33/77 (42%) Frame = +1 Query: 127 YQGLDPDDLVWAKITGHAMWPAVIVDESNVPSSRALKPIRLDQSILVQFFGTHDFARIKS 306 Y + +LVWAK+ G WPA ++ + D + V+FFG H Sbjct: 235 YPCIPNHELVWAKMKGFGFWPAKVMQKE-------------DNQVDVRFFGHHHQRAWIP 281 Query: 307 KQAVPFLSGLLSSLHLK 357 + + ++ + LH+K Sbjct: 282 SENIQDITVNIHRLHVK 298
>PKCB1_HUMAN (Q9ULU4) Protein kinase C-binding protein 1 (Rack7) (Cutaneous| T-cell lymphoma associated antigen se14-3) (CTCL tumor antigen se14-3) (Zinc finger MYND domain containing protein 8) Length = 1186 Score = 32.0 bits (71), Expect = 0.88 Identities = 19/52 (36%), Positives = 25/52 (48%) Frame = +1 Query: 139 DPDDLVWAKITGHAMWPAVIVDESNVPSSRALKPIRLDQSILVQFFGTHDFA 294 +P LVWAK+ G WPA +AL+ D + +FFG HD A Sbjct: 276 NPHPLVWAKLKGFPFWPA-----------KALRD--KDGQVDARFFGQHDRA 314
>ZMY11_MOUSE (Q8R5C8) Zinc finger MYND domain-containing protein 11| Length = 562 Score = 32.0 bits (71), Expect = 0.88 Identities = 16/53 (30%), Positives = 24/53 (45%) Frame = +1 Query: 127 YQGLDPDDLVWAKITGHAMWPAVIVDESNVPSSRALKPIRLDQSILVQFFGTH 285 Y + +LVWAK+ G WPA ++ + D + V+FFG H Sbjct: 235 YPCIPNHELVWAKMKGFGFWPAKVMQKE-------------DNQVDVRFFGHH 274
>BRPF1_HUMAN (P55201) Peregrin (Bromodomain and PHD finger-containing protein 1)| (BR140 protein) Length = 1214 Score = 31.6 bits (70), Expect = 1.2 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = +1 Query: 136 LDPDDLVWAKITGHAMWPAVIVD 204 LD DLVWAK G+ +PA+I+D Sbjct: 1083 LDALDLVWAKCRGYPSYPALIID 1105
>YMT4_YEAST (Q04213) Hypothetical 55.4 kDa protein in MCM1-NUP116 intergenic| region Length = 475 Score = 31.2 bits (69), Expect = 1.5 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 Query: 142 PDDLVWAKITGHAMWPAVIVDESNVPSS 225 P D+V AK+ G + WPA+I+ +P + Sbjct: 8 PTDIVLAKVKGFSAWPAMIIPNELIPDN 35
>MSH6_HUMAN (P52701) DNA mismatch repair protein MSH6 (MutS-alpha 160 kDa| subunit) (G/T mismatch binding protein) (GTBP) (GTMBP) (p160) Length = 1360 Score = 30.8 bits (68), Expect = 2.0 Identities = 10/19 (52%), Positives = 14/19 (73%) Frame = +1 Query: 142 PDDLVWAKITGHAMWPAVI 198 P DLVWAK+ G+ WP ++ Sbjct: 92 PGDLVWAKMEGYPWWPCLV 110
>MSH6_MOUSE (P54276) DNA mismatch repair protein MSH6 (MutS-alpha 160 kDa| subunit) (G/T mismatch-binding protein) (GTBP) (GTMBP) (p160) Length = 1358 Score = 30.8 bits (68), Expect = 2.0 Identities = 10/19 (52%), Positives = 14/19 (73%) Frame = +1 Query: 142 PDDLVWAKITGHAMWPAVI 198 P DLVWAK+ G+ WP ++ Sbjct: 92 PGDLVWAKMEGYPWWPCLV 110
>BRD1_HUMAN (O95696) Bromodomain-containing protein 1 (BR140-like protein)| Length = 1058 Score = 30.0 bits (66), Expect = 3.3 Identities = 11/23 (47%), Positives = 18/23 (78%) Frame = +1 Query: 136 LDPDDLVWAKITGHAMWPAVIVD 204 L+P +VWAK +G+ +PA+I+D Sbjct: 927 LEPLKVVWAKCSGYPSYPALIID 949
>MBD5_HUMAN (Q9P267) Methyl-CpG-binding domain protein 5 (Methyl-CpG-binding| protein MBD5) Length = 1494 Score = 29.6 bits (65), Expect = 4.4 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +1 Query: 148 DLVWAKITGHAMWPAVIVDESNVPSSRALKP 240 DLVW +I G WP +V E +V +S P Sbjct: 1387 DLVWGQIKGLTSWPGKLVREDDVHNSCQQSP 1417
>PUS1_ASHGO (Q755C8) tRNA pseudouridine synthase 1 (EC 5.4.99.-) (tRNA-uridine| isomerase 1) (tRNA pseudouridylate synthase 1) Length = 528 Score = 28.9 bits (63), Expect = 7.5 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +2 Query: 329 VAFFLPCISNASKHASPEA*KKPRS 403 + F LPC S+ ++ASPEA K P + Sbjct: 479 IDFLLPCSSSPQENASPEAQKAPET 503
>PTP3_DICDI (P54637) Tyrosine-protein phosphatase 3 (EC 3.1.3.48)| (Protein-tyrosine-phosphate phosphohydrolase 3) Length = 989 Score = 28.5 bits (62), Expect = 9.7 Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 13/116 (11%) Frame = -1 Query: 429 FWKLLCEKKLLGFF*ASGEACLLAFEMQGRKKAT----------QKGHRLLRLNP---CK 289 FW+++ E++ +S CL E G+KKA + G + L+ K Sbjct: 529 FWRMVWEER------SSVIVCLTKLEENGKKKADVYYPETSQAQEYGSFWIHLHKKVMFK 582 Query: 288 IMGTKELNKY*LI*PNWLQGPARRNI*LVHYNSWPHCMTCYFSPH*IIWIKTLVVM 121 +G L+ Y + P R + L+HY WP C S H I+TL VM Sbjct: 583 DIGVSSLHLY----KKGEEFP--REVVLLHYTQWPDCGAPPSSSH----IRTLSVM 628 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,989,221 Number of Sequences: 219361 Number of extensions: 1355556 Number of successful extensions: 2959 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 2899 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2940 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3304846491 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
