ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl30d05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_450167.1| Oryza sativa (japonica cultivar-group), mRNA 387 e-104
2ref|XM_450166.1| Oryza sativa (japonica cultivar-group), mRNA 387 e-104
3dbj|AK074022.1| Oryza sativa (japonica cultivar-group) cDNA clon... 387 e-104
4dbj|AK065095.1| Oryza sativa (japonica cultivar-group) cDNA clon... 387 e-104
5dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 137 4e-29
6dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic D... 137 4e-29
7dbj|AP005582.3| Oryza sativa (japonica cultivar-group) genomic D... 137 4e-29
8gb|AC113279.7| Mus musculus chromosome 3, clone RP23-389J8, comp... 48 0.027
9gb|AC007071.7| Arabidopsis thaliana chromosome 2 clone T9H9 map ... 44 0.42
10gb|AC009250.3|AC009250 Drosophila melanogaster, chromosome 2L, r... 44 0.42
11gb|AE003653.3| Drosophila melanogaster chromosome 2L, section 62... 44 0.42
12ref|NM_100464.3| Arabidopsis thaliana DNA binding / nucleic acid... 42 1.7
13gb|AC125225.4| Mus musculus BAC clone RP23-36I17 from 6, complet... 42 1.7
14gb|AC121867.2| Mus musculus BAC clone RP24-115M7 from 6, complet... 42 1.7
15gb|AC113169.2| Homo sapiens chromosome 3 clone RP11-322K13, comp... 42 1.7
16gb|AC112213.2| Homo sapiens chromosome 3 clone RP11-223D18, comp... 42 1.7
17gb|AC024153.22| Homo sapiens 12 BAC RP13-359K18 (Roswell Park Ca... 42 1.7
18gb|AC009999.2|T20M3 Sequence of BAC T20M3 from Arabidopsis thali... 42 1.7
19gb|AC125180.6| Mus musculus BAC clone RP23-322K1 from chromosome... 40 6.5
20gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence 40 6.5
21ref|XM_869245.1| PREDICTED: Bos taurus similar to fibrous sheath... 40 6.5
22gb|AC126024.3| Mus musculus BAC clone RP24-423I20 from chromosom... 40 6.5
23gb|AC122867.4| Mus musculus BAC clone RP23-146P6 from 8, complet... 40 6.5
24gb|AC122306.4| Mus musculus BAC clone RP23-285M8 from 18, comple... 40 6.5
25emb|AL805946.5| Mouse DNA sequence from clone RP23-127B1 on chro... 40 6.5
26gb|AC153647.4| Mus musculus BAC clone RP24-396E16 from chromosom... 40 6.5
27gb|AE009477.1| Brucella melitensis 16M chromosome I, section 34 ... 40 6.5
28gb|AC156394.6| Mus musculus 6 BAC RP24-314D22 (Roswell Park Canc... 40 6.5
29gb|AC073912.38| Homo sapiens 12 BAC RP11-989F5 (Roswell Park Can... 40 6.5
30gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome 40 6.5
31gb|AC103719.12| Homo sapiens chromosome 8, clone RP11-421P23, co... 40 6.5
32gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I... 40 6.5
33gb|AC154206.2| Mus musculus BAC clone RP24-104P20 from 14, compl... 40 6.5
34gb|AC105065.13| Mus musculus chromosome 18, clone RP24-459E1, co... 40 6.5
35gb|AC127698.5| Mus musculus BAC clone RP24-113N24 from 3, comple... 40 6.5
36emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I,... 40 6.5
37gb|AC154239.3| Mus musculus BAC clone RP24-164C12 from chromosom... 40 6.5
38gb|L43054.1|BRUADSY Brucella abortus (clone pSKpurA) adenylosucc... 40 6.5
39emb|AL627345.11| Mouse DNA sequence from clone RP23-169E7 on chr... 40 6.5 
>ref|XM_450167.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2944

 Score =  387 bits (195), Expect = e-104
 Identities = 393/459 (85%)
 Strand = Plus / Plus

                                                                        
Query: 2    atgaaaggatacaattttccatttcatctgaggaaatgaagtgtctgaacctgaaatttg 61
            ||||||||||| ||||||| ||||||||||| |||||||||||   |||| |||||||||
Sbjct: 864  atgaaaggataaaattttctatttcatctgaagaaatgaagtgcaggaacttgaaatttg 923

                                                                        
Query: 62   gaacatctaacctggataagcagggatacgatgagctgcttgcacttgctgtcagctttc 121
            |||  || || ||| | |||  ||| || |||||| ||||||| |||||||| ||| |||
Sbjct: 924  gaatttccaatctgaacaagaggggctatgatgagttgcttgcccttgctgttagccttc 983

                                                                        
Query: 122  atgactaccaaggtcttgatccagatgatctagtgtgggctaaaataacaggtcatgcaa 181
            |||| ||||||||||||||||||| |||||| |||||||||||| | ||||||||||| |
Sbjct: 984  atgattaccaaggtcttgatccaggtgatcttgtgtgggctaaacttacaggtcatgcca 1043

                                                                        
Query: 182  tgtggccagctgttatagtggacgagtcaaatgttccttctagccgggccctgaagccaa 241
            |||||||||||||| | ||||| || |||||||||||| ||| | ||||  |||||||| 
Sbjct: 1044 tgtggccagctgttgtggtggatgaatcaaatgttcctgctaacagggctttgaagccag 1103

                                                                        
Query: 242  ttcggttagatcaatcaatacttgttcaattctttggtacccatgattttgcaaggatta 301
              ||  ||||||| || ||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 1104 gccgactagatcagtcgatacttgttcaattctttggtactcatgattttgccaggatta 1163

                                                                        
Query: 302  agtcgaagcaggcggtgccctttctgagtggccttctttcttccttgcatctcaaatgca 361
            ||| |||||| |||||||||||||||| ||||||||||||||| |||||||| |||||||
Sbjct: 1164 agttgaagcaagcggtgccctttctgaatggccttctttcttctttgcatcttaaatgca 1223

                                                                        
Query: 362  agcaaacacgcttctcccgaggcttagaagaagccaaggagtttcttctcacacaacagc 421
            ||||| |||||||||  ||  | |||||||||||||||||||||||   |||||| |  |
Sbjct: 1224 agcaagcacgcttctatcggagtttagaagaagccaaggagtttctctgcacacagcttc 1283

                                                   
Query: 422  ttccagaaaatatgttgcaactccggaaatccattgaaa 460
            | |||||||||||||||||||| | ||||||||| ||||
Sbjct: 1284 tcccagaaaatatgttgcaactacagaaatccatggaaa 1322
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>ref|XM_450166.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3570

 Score =  387 bits (195), Expect = e-104
 Identities = 393/459 (85%)
 Strand = Plus / Plus

                                                                        
Query: 2    atgaaaggatacaattttccatttcatctgaggaaatgaagtgtctgaacctgaaatttg 61
            ||||||||||| ||||||| ||||||||||| |||||||||||   |||| |||||||||
Sbjct: 835  atgaaaggataaaattttctatttcatctgaagaaatgaagtgcaggaacttgaaatttg 894

                                                                        
Query: 62   gaacatctaacctggataagcagggatacgatgagctgcttgcacttgctgtcagctttc 121
            |||  || || ||| | |||  ||| || |||||| ||||||| |||||||| ||| |||
Sbjct: 895  gaatttccaatctgaacaagaggggctatgatgagttgcttgcccttgctgttagccttc 954

                                                                        
Query: 122  atgactaccaaggtcttgatccagatgatctagtgtgggctaaaataacaggtcatgcaa 181
            |||| ||||||||||||||||||| |||||| |||||||||||| | ||||||||||| |
Sbjct: 955  atgattaccaaggtcttgatccaggtgatcttgtgtgggctaaacttacaggtcatgcca 1014

                                                                        
Query: 182  tgtggccagctgttatagtggacgagtcaaatgttccttctagccgggccctgaagccaa 241
            |||||||||||||| | ||||| || |||||||||||| ||| | ||||  |||||||| 
Sbjct: 1015 tgtggccagctgttgtggtggatgaatcaaatgttcctgctaacagggctttgaagccag 1074

                                                                        
Query: 242  ttcggttagatcaatcaatacttgttcaattctttggtacccatgattttgcaaggatta 301
              ||  ||||||| || ||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 1075 gccgactagatcagtcgatacttgttcaattctttggtactcatgattttgccaggatta 1134

                                                                        
Query: 302  agtcgaagcaggcggtgccctttctgagtggccttctttcttccttgcatctcaaatgca 361
            ||| |||||| |||||||||||||||| ||||||||||||||| |||||||| |||||||
Sbjct: 1135 agttgaagcaagcggtgccctttctgaatggccttctttcttctttgcatcttaaatgca 1194

                                                                        
Query: 362  agcaaacacgcttctcccgaggcttagaagaagccaaggagtttcttctcacacaacagc 421
            ||||| |||||||||  ||  | |||||||||||||||||||||||   |||||| |  |
Sbjct: 1195 agcaagcacgcttctatcggagtttagaagaagccaaggagtttctctgcacacagcttc 1254

                                                   
Query: 422  ttccagaaaatatgttgcaactccggaaatccattgaaa 460
            | |||||||||||||||||||| | ||||||||| ||||
Sbjct: 1255 tcccagaaaatatgttgcaactacagaaatccatggaaa 1293
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>dbj|AK074022.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033074A15, full
            insert sequence
          Length = 3570

 Score =  387 bits (195), Expect = e-104
 Identities = 393/459 (85%)
 Strand = Plus / Plus

                                                                        
Query: 2    atgaaaggatacaattttccatttcatctgaggaaatgaagtgtctgaacctgaaatttg 61
            ||||||||||| ||||||| ||||||||||| |||||||||||   |||| |||||||||
Sbjct: 835  atgaaaggataaaattttctatttcatctgaagaaatgaagtgcaggaacttgaaatttg 894

                                                                        
Query: 62   gaacatctaacctggataagcagggatacgatgagctgcttgcacttgctgtcagctttc 121
            |||  || || ||| | |||  ||| || |||||| ||||||| |||||||| ||| |||
Sbjct: 895  gaatttccaatctgaacaagaggggctatgatgagttgcttgcccttgctgttagccttc 954

                                                                        
Query: 122  atgactaccaaggtcttgatccagatgatctagtgtgggctaaaataacaggtcatgcaa 181
            |||| ||||||||||||||||||| |||||| |||||||||||| | ||||||||||| |
Sbjct: 955  atgattaccaaggtcttgatccaggtgatcttgtgtgggctaaacttacaggtcatgcca 1014

                                                                        
Query: 182  tgtggccagctgttatagtggacgagtcaaatgttccttctagccgggccctgaagccaa 241
            |||||||||||||| | ||||| || |||||||||||| ||| | ||||  |||||||| 
Sbjct: 1015 tgtggccagctgttgtggtggatgaatcaaatgttcctgctaacagggctttgaagccag 1074

                                                                        
Query: 242  ttcggttagatcaatcaatacttgttcaattctttggtacccatgattttgcaaggatta 301
              ||  ||||||| || ||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 1075 gccgactagatcagtcgatacttgttcaattctttggtactcatgattttgccaggatta 1134

                                                                        
Query: 302  agtcgaagcaggcggtgccctttctgagtggccttctttcttccttgcatctcaaatgca 361
            ||| |||||| |||||||||||||||| ||||||||||||||| |||||||| |||||||
Sbjct: 1135 agttgaagcaagcggtgccctttctgaatggccttctttcttctttgcatcttaaatgca 1194

                                                                        
Query: 362  agcaaacacgcttctcccgaggcttagaagaagccaaggagtttcttctcacacaacagc 421
            ||||| |||||||||  ||  | |||||||||||||||||||||||   |||||| |  |
Sbjct: 1195 agcaagcacgcttctatcggagtttagaagaagccaaggagtttctctgcacacagcttc 1254

                                                   
Query: 422  ttccagaaaatatgttgcaactccggaaatccattgaaa 460
            | |||||||||||||||||||| | ||||||||| ||||
Sbjct: 1255 tcccagaaaatatgttgcaactacagaaatccatggaaa 1293
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>dbj|AK065095.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001M12, full
            insert sequence
          Length = 2944

 Score =  387 bits (195), Expect = e-104
 Identities = 393/459 (85%)
 Strand = Plus / Plus

                                                                        
Query: 2    atgaaaggatacaattttccatttcatctgaggaaatgaagtgtctgaacctgaaatttg 61
            ||||||||||| ||||||| ||||||||||| |||||||||||   |||| |||||||||
Sbjct: 864  atgaaaggataaaattttctatttcatctgaagaaatgaagtgcaggaacttgaaatttg 923

                                                                        
Query: 62   gaacatctaacctggataagcagggatacgatgagctgcttgcacttgctgtcagctttc 121
            |||  || || ||| | |||  ||| || |||||| ||||||| |||||||| ||| |||
Sbjct: 924  gaatttccaatctgaacaagaggggctatgatgagttgcttgcccttgctgttagccttc 983

                                                                        
Query: 122  atgactaccaaggtcttgatccagatgatctagtgtgggctaaaataacaggtcatgcaa 181
            |||| ||||||||||||||||||| |||||| |||||||||||| | ||||||||||| |
Sbjct: 984  atgattaccaaggtcttgatccaggtgatcttgtgtgggctaaacttacaggtcatgcca 1043

                                                                        
Query: 182  tgtggccagctgttatagtggacgagtcaaatgttccttctagccgggccctgaagccaa 241
            |||||||||||||| | ||||| || |||||||||||| ||| | ||||  |||||||| 
Sbjct: 1044 tgtggccagctgttgtggtggatgaatcaaatgttcctgctaacagggctttgaagccag 1103

                                                                        
Query: 242  ttcggttagatcaatcaatacttgttcaattctttggtacccatgattttgcaaggatta 301
              ||  ||||||| || ||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 1104 gccgactagatcagtcgatacttgttcaattctttggtactcatgattttgccaggatta 1163

                                                                        
Query: 302  agtcgaagcaggcggtgccctttctgagtggccttctttcttccttgcatctcaaatgca 361
            ||| |||||| |||||||||||||||| ||||||||||||||| |||||||| |||||||
Sbjct: 1164 agttgaagcaagcggtgccctttctgaatggccttctttcttctttgcatcttaaatgca 1223

                                                                        
Query: 362  agcaaacacgcttctcccgaggcttagaagaagccaaggagtttcttctcacacaacagc 421
            ||||| |||||||||  ||  | |||||||||||||||||||||||   |||||| |  |
Sbjct: 1224 agcaagcacgcttctatcggagtttagaagaagccaaggagtttctctgcacacagcttc 1283

                                                   
Query: 422  ttccagaaaatatgttgcaactccggaaatccattgaaa 460
            | |||||||||||||||||||| | ||||||||| ||||
Sbjct: 1284 tcccagaaaatatgttgcaactacagaaatccatggaaa 1322
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score =  137 bits (69), Expect = 4e-29
 Identities = 147/173 (84%)
 Strand = Plus / Minus

                                                                           
Query: 2       atgaaaggatacaattttccatttcatctgaggaaatgaagtgtctgaacctgaaatttg 61
               ||||||||||| ||||||| ||||||||||| |||||||||||   |||| |||||||||
Sbjct: 2561291 atgaaaggataaaattttctatttcatctgaagaaatgaagtgcaggaacttgaaatttg 2561232

                                                                           
Query: 62      gaacatctaacctggataagcagggatacgatgagctgcttgcacttgctgtcagctttc 121
               |||  || || ||| | |||  ||| || |||||| ||||||| |||||||| ||| |||
Sbjct: 2561231 gaatttccaatctgaacaagaggggctatgatgagttgcttgcccttgctgttagccttc 2561172

                                                                    
Query: 122     atgactaccaaggtcttgatccagatgatctagtgtgggctaaaataacaggt 174
               |||| ||||||||||||||||||| |||||| |||||||||||| | ||||||
Sbjct: 2561171 atgattaccaaggtcttgatccaggtgatcttgtgtgggctaaacttacaggt 2561119



 Score =  129 bits (65), Expect = 9e-27
 Identities = 98/109 (89%)
 Strand = Plus / Minus

                                                                           
Query: 295     aggattaagtcgaagcaggcggtgccctttctgagtggccttctttcttccttgcatctc 354
               |||||||||| |||||| |||||||||||||||| ||||||||||||||| |||||||| 
Sbjct: 2560149 aggattaagttgaagcaagcggtgccctttctgaatggccttctttcttctttgcatctt 2560090

                                                                
Query: 355     aaatgcaagcaaacacgcttctcccgaggcttagaagaagccaaggagt 403
               |||||||||||| |||||||||  ||  | |||||||||||||||||||
Sbjct: 2560089 aaatgcaagcaagcacgcttctatcggagtttagaagaagccaaggagt 2560041



 Score =  107 bits (54), Expect = 3e-20
 Identities = 108/126 (85%)
 Strand = Plus / Minus

                                                                           
Query: 168     aacaggtcatgcaatgtggccagctgttatagtggacgagtcaaatgttccttctagccg 227
               |||||||||||| ||||||||||||||| | ||||| || |||||||||||| ||| | |
Sbjct: 2560359 aacaggtcatgccatgtggccagctgttgtggtggatgaatcaaatgttcctgctaacag 2560300

                                                                           
Query: 228     ggccctgaagccaattcggttagatcaatcaatacttgttcaattctttggtacccatga 287
               |||  ||||||||   ||  ||||||| || ||||||||||||||||||||||| |||||
Sbjct: 2560299 ggctttgaagccaggccgactagatcagtcgatacttgttcaattctttggtactcatga 2560240

                     
Query: 288     ttttgc 293
               ||||||
Sbjct: 2560239 ttttgc 2560234



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                    
Query: 424     ccagaaaatatgttgcaactccggaaatccattgaaa 460
               |||||||||||||||||||| | ||||||||| ||||
Sbjct: 2559915 ccagaaaatatgttgcaactacagaaatccatggaaa 2559879
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>dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0406E03
          Length = 201069

 Score =  137 bits (69), Expect = 4e-29
 Identities = 147/173 (84%)
 Strand = Plus / Minus

                                                                          
Query: 2      atgaaaggatacaattttccatttcatctgaggaaatgaagtgtctgaacctgaaatttg 61
              ||||||||||| ||||||| ||||||||||| |||||||||||   |||| |||||||||
Sbjct: 147881 atgaaaggataaaattttctatttcatctgaagaaatgaagtgcaggaacttgaaatttg 147822

                                                                          
Query: 62     gaacatctaacctggataagcagggatacgatgagctgcttgcacttgctgtcagctttc 121
              |||  || || ||| | |||  ||| || |||||| ||||||| |||||||| ||| |||
Sbjct: 147821 gaatttccaatctgaacaagaggggctatgatgagttgcttgcccttgctgttagccttc 147762

                                                                   
Query: 122    atgactaccaaggtcttgatccagatgatctagtgtgggctaaaataacaggt 174
              |||| ||||||||||||||||||| |||||| |||||||||||| | ||||||
Sbjct: 147761 atgattaccaaggtcttgatccaggtgatcttgtgtgggctaaacttacaggt 147709



 Score =  129 bits (65), Expect = 9e-27
 Identities = 98/109 (89%)
 Strand = Plus / Minus

                                                                          
Query: 295    aggattaagtcgaagcaggcggtgccctttctgagtggccttctttcttccttgcatctc 354
              |||||||||| |||||| |||||||||||||||| ||||||||||||||| |||||||| 
Sbjct: 146739 aggattaagttgaagcaagcggtgccctttctgaatggccttctttcttctttgcatctt 146680

                                                               
Query: 355    aaatgcaagcaaacacgcttctcccgaggcttagaagaagccaaggagt 403
              |||||||||||| |||||||||  ||  | |||||||||||||||||||
Sbjct: 146679 aaatgcaagcaagcacgcttctatcggagtttagaagaagccaaggagt 146631



 Score =  107 bits (54), Expect = 3e-20
 Identities = 108/126 (85%)
 Strand = Plus / Minus

                                                                          
Query: 168    aacaggtcatgcaatgtggccagctgttatagtggacgagtcaaatgttccttctagccg 227
              |||||||||||| ||||||||||||||| | ||||| || |||||||||||| ||| | |
Sbjct: 146949 aacaggtcatgccatgtggccagctgttgtggtggatgaatcaaatgttcctgctaacag 146890

                                                                          
Query: 228    ggccctgaagccaattcggttagatcaatcaatacttgttcaattctttggtacccatga 287
              |||  ||||||||   ||  ||||||| || ||||||||||||||||||||||| |||||
Sbjct: 146889 ggctttgaagccaggccgactagatcagtcgatacttgttcaattctttggtactcatga 146830

                    
Query: 288    ttttgc 293
              ||||||
Sbjct: 146829 ttttgc 146824



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                   
Query: 424    ccagaaaatatgttgcaactccggaaatccattgaaa 460
              |||||||||||||||||||| | ||||||||| ||||
Sbjct: 146505 ccagaaaatatgttgcaactacagaaatccatggaaa 146469
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>dbj|AP005582.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
            clone:P0006E02
          Length = 141782

 Score =  137 bits (69), Expect = 4e-29
 Identities = 147/173 (84%)
 Strand = Plus / Minus

                                                                        
Query: 2    atgaaaggatacaattttccatttcatctgaggaaatgaagtgtctgaacctgaaatttg 61
            ||||||||||| ||||||| ||||||||||| |||||||||||   |||| |||||||||
Sbjct: 6569 atgaaaggataaaattttctatttcatctgaagaaatgaagtgcaggaacttgaaatttg 6510

                                                                        
Query: 62   gaacatctaacctggataagcagggatacgatgagctgcttgcacttgctgtcagctttc 121
            |||  || || ||| | |||  ||| || |||||| ||||||| |||||||| ||| |||
Sbjct: 6509 gaatttccaatctgaacaagaggggctatgatgagttgcttgcccttgctgttagccttc 6450

                                                                 
Query: 122  atgactaccaaggtcttgatccagatgatctagtgtgggctaaaataacaggt 174
            |||| ||||||||||||||||||| |||||| |||||||||||| | ||||||
Sbjct: 6449 atgattaccaaggtcttgatccaggtgatcttgtgtgggctaaacttacaggt 6397



 Score =  129 bits (65), Expect = 9e-27
 Identities = 98/109 (89%)
 Strand = Plus / Minus

                                                                        
Query: 295  aggattaagtcgaagcaggcggtgccctttctgagtggccttctttcttccttgcatctc 354
            |||||||||| |||||| |||||||||||||||| ||||||||||||||| |||||||| 
Sbjct: 5427 aggattaagttgaagcaagcggtgccctttctgaatggccttctttcttctttgcatctt 5368

                                                             
Query: 355  aaatgcaagcaaacacgcttctcccgaggcttagaagaagccaaggagt 403
            |||||||||||| |||||||||  ||  | |||||||||||||||||||
Sbjct: 5367 aaatgcaagcaagcacgcttctatcggagtttagaagaagccaaggagt 5319



 Score =  107 bits (54), Expect = 3e-20
 Identities = 108/126 (85%)
 Strand = Plus / Minus

                                                                        
Query: 168  aacaggtcatgcaatgtggccagctgttatagtggacgagtcaaatgttccttctagccg 227
            |||||||||||| ||||||||||||||| | ||||| || |||||||||||| ||| | |
Sbjct: 5637 aacaggtcatgccatgtggccagctgttgtggtggatgaatcaaatgttcctgctaacag 5578

                                                                        
Query: 228  ggccctgaagccaattcggttagatcaatcaatacttgttcaattctttggtacccatga 287
            |||  ||||||||   ||  ||||||| || ||||||||||||||||||||||| |||||
Sbjct: 5577 ggctttgaagccaggccgactagatcagtcgatacttgttcaattctttggtactcatga 5518

                  
Query: 288  ttttgc 293
            ||||||
Sbjct: 5517 ttttgc 5512



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 424  ccagaaaatatgttgcaactccggaaatccattgaaa 460
            |||||||||||||||||||| | ||||||||| ||||
Sbjct: 5193 ccagaaaatatgttgcaactacagaaatccatggaaa 5157
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>gb|AC113279.7| Mus musculus chromosome 3, clone RP23-389J8, complete sequence
          Length = 198009

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 408   tctcacacaacagcttccagaaaa 431
             ||||||||||||||||||||||||
Sbjct: 84056 tctcacacaacagcttccagaaaa 84079
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>gb|AC007071.7| Arabidopsis thaliana chromosome 2 clone T9H9 map nga361, complete
             sequence
          Length = 79734

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 169   acaggtcatgcaatgtggccagctgttatagtggacga 206
             ||||||||||| ||||||||||| ||||| || |||||
Sbjct: 49488 acaggtcatgctatgtggccagcagttattgtagacga 49451
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>gb|AC009250.3|AC009250 Drosophila melanogaster, chromosome 2L, region 36B-36B, BAC clone
             BACR27M18, complete sequence
          Length = 170362

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 95    agctgcttgcacttgctgtcag 116
             ||||||||||||||||||||||
Sbjct: 87009 agctgcttgcacttgctgtcag 86988
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>gb|AE003653.3| Drosophila melanogaster chromosome 2L, section 62 of 83 of the
            complete sequence
          Length = 247634

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 95   agctgcttgcacttgctgtcag 116
            ||||||||||||||||||||||
Sbjct: 2351 agctgcttgcacttgctgtcag 2372
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>ref|NM_100464.3| Arabidopsis thaliana DNA binding / nucleic acid binding / protein
            binding / zinc ion binding AT1G05830 mRNA, complete cds
          Length = 3726

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                 
Query: 157  tgggctaaaataacaggtcatgcaatgtggccagctgttatagtggacgagtc 209
            ||||| ||| |||| |||||||| |||||||||||  |||| ||||| |||||
Sbjct: 1166 tgggccaaactaactggtcatgctatgtggccagcaattatcgtggatgagtc 1218
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>gb|AC125225.4| Mus musculus BAC clone RP23-36I17 from 6, complete sequence
          Length = 215406

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 20    ccatttcatctgaggaaatgaagtg 44
             ||||||||||||||||||| |||||
Sbjct: 22806 ccatttcatctgaggaaataaagtg 22782
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>gb|AC121867.2| Mus musculus BAC clone RP24-115M7 from 6, complete sequence
          Length = 165179

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 20  ccatttcatctgaggaaatgaagtg 44
           ||||||||||||||||||| |||||
Sbjct: 895 ccatttcatctgaggaaataaagtg 919
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>gb|AC113169.2| Homo sapiens chromosome 3 clone RP11-322K13, complete sequence
          Length = 174293

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 351    tctcaaatgcaagcaaacacg 371
              |||||||||||||||||||||
Sbjct: 158213 tctcaaatgcaagcaaacacg 158233
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>gb|AC112213.2| Homo sapiens chromosome 3 clone RP11-223D18, complete sequence
          Length = 144201

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 351   tctcaaatgcaagcaaacacg 371
             |||||||||||||||||||||
Sbjct: 54565 tctcaaatgcaagcaaacacg 54585
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>gb|AC024153.22| Homo sapiens 12 BAC RP13-359K18 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 178905

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 11    tacaattttccatttcatctg 31
             |||||||||||||||||||||
Sbjct: 16915 tacaattttccatttcatctg 16895
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>gb|AC009999.2|T20M3 Sequence of BAC T20M3 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 79554

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 169   acaggtcatgcaatgtggccagctgttatagtggacgagtc 209
             ||||||||||| |||||||||||  |||| ||||| |||||
Sbjct: 34565 acaggtcatgctatgtggccagcaattatcgtggatgagtc 34605
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>gb|AC125180.6| Mus musculus BAC clone RP23-322K1 from chromosome 14, complete sequence
          Length = 200560

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    catttcatctgaggaaatga 40
             ||||||||||||||||||||
Sbjct: 93144 catttcatctgaggaaatga 93163
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>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence
          Length = 2107794

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 390     agaagccaaggagtttcttc 409
               ||||||||||||||||||||
Sbjct: 1627376 agaagccaaggagtttcttc 1627357
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>ref|XM_869245.1| PREDICTED: Bos taurus similar to fibrous sheath interacting protein
           1 (LOC617063), partial mRNA
          Length = 1266

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 321 ctttctgagtggccttcttt 340
           ||||||||||||||||||||
Sbjct: 248 ctttctgagtggccttcttt 229
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>gb|AC126024.3| Mus musculus BAC clone RP24-423I20 from chromosome 1, complete sequence
          Length = 177041

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 408   tctcacacaacagcttccagaaaa 431
             ||||| ||||||||||||||||||
Sbjct: 23138 tctcatacaacagcttccagaaaa 23161
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>gb|AC122867.4| Mus musculus BAC clone RP23-146P6 from 8, complete sequence
          Length = 180742

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 323    ttctgagtggccttctttcttcct 346
              ||||| ||||||||||||||||||
Sbjct: 108365 ttctgggtggccttctttcttcct 108342
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>gb|AC122306.4| Mus musculus BAC clone RP23-285M8 from 18, complete sequence
          Length = 177969

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 424   ccagaaaatatgttgcaact 443
             ||||||||||||||||||||
Sbjct: 53032 ccagaaaatatgttgcaact 53013
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>emb|AL805946.5| Mouse DNA sequence from clone RP23-127B1 on chromosome 4 Contains the
             3' end of a novel gene, complete sequence
          Length = 133178

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   atgcaatgtggccagctgtt 195
             ||||||||||||||||||||
Sbjct: 63308 atgcaatgtggccagctgtt 63327
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>gb|AC153647.4| Mus musculus BAC clone RP24-396E16 from chromosome 1, complete sequence
          Length = 177775

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 408   tctcacacaacagcttccagaaaa 431
             ||||| ||||||||||||||||||
Sbjct: 76961 tctcatacaacagcttccagaaaa 76984
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>gb|AE009477.1| Brucella melitensis 16M chromosome I, section 34 of 195 of the
            complete sequence
          Length = 10849

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 390  agaagccaaggagtttcttc 409
            ||||||||||||||||||||
Sbjct: 5977 agaagccaaggagtttcttc 5996
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>gb|AC156394.6| Mus musculus 6 BAC RP24-314D22 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 171323

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 14    aattttccatttcatctgaggaaa 37
             |||||||| |||||||||||||||
Sbjct: 86912 aattttccttttcatctgaggaaa 86889
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>gb|AC073912.38| Homo sapiens 12 BAC RP11-989F5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 211550

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 333    ccttctttcttccttgcatc 352
              ||||||||||||||||||||
Sbjct: 201263 ccttctttcttccttgcatc 201282
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>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome
          Length = 3179300

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 346    ttgcatctcaaatgcaagcaaaca 369
              |||||||||||| |||||||||||
Sbjct: 516126 ttgcatctcaaaggcaagcaaaca 516149
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>gb|AC103719.12| Homo sapiens chromosome 8, clone RP11-421P23, complete sequence
          Length = 167878

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 335    ttctttcttccttgcatctc 354
              ||||||||||||||||||||
Sbjct: 150436 ttctttcttccttgcatctc 150455
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>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence
          Length = 2124241

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 390     agaagccaaggagtttcttc 409
               ||||||||||||||||||||
Sbjct: 1644282 agaagccaaggagtttcttc 1644263
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>gb|AC154206.2| Mus musculus BAC clone RP24-104P20 from 14, complete sequence
          Length = 167116

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 176   atgcaatgtggccagctgtt 195
             ||||||||||||||||||||
Sbjct: 19390 atgcaatgtggccagctgtt 19371
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>gb|AC105065.13| Mus musculus chromosome 18, clone RP24-459E1, complete sequence
          Length = 154308

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 357   atgcaagcaaacacgcttct 376
             ||||||||||||||||||||
Sbjct: 95804 atgcaagcaaacacgcttct 95785
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>gb|AC127698.5| Mus musculus BAC clone RP24-113N24 from 3, complete sequence
          Length = 174669

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 408    tctcacacaacagcttccag 427
              ||||||||||||||||||||
Sbjct: 137269 tctcacacaacagcttccag 137250
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>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain
               2308
          Length = 2121359

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 390     agaagccaaggagtttcttc 409
               ||||||||||||||||||||
Sbjct: 1641451 agaagccaaggagtttcttc 1641432
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>gb|AC154239.3| Mus musculus BAC clone RP24-164C12 from chromosome 14, complete sequence
          Length = 161815

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 176    atgcaatgtggccagctgtt 195
              ||||||||||||||||||||
Sbjct: 139164 atgcaatgtggccagctgtt 139145
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>gb|L43054.1|BRUADSY Brucella abortus (clone pSKpurA) adenylosuccinate synthetase gene,
           complete cds
          Length = 1326

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 390 agaagccaaggagtttcttc 409
           ||||||||||||||||||||
Sbjct: 100 agaagccaaggagtttcttc 119
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>emb|AL627345.11| Mouse DNA sequence from clone RP23-169E7 on chromosome 4, complete
             sequence
          Length = 73565

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    tggataagcagggatacgat 93
             ||||||||||||||||||||
Sbjct: 59662 tggataagcagggatacgat 59643


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,961,993
Number of Sequences: 3902068
Number of extensions: 4961993
Number of successful extensions: 102666
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102485
Number of HSP's gapped (non-prelim): 156
length of query: 483
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 461
effective length of database: 17,147,199,772
effective search space: 7904859094892
effective search space used: 7904859094892
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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