>gb|AF143281.1| Vitis vinifera microsatellite ssrVvUCH33 sequence
          Length = 506

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                               
Query: 313 cgtcgctgagcaggaggctgaggaacagcgggagcctcaagggcggccagtc 364
           |||||||||||||||||||||||| || ||||||| | ||||| ||||||||
Sbjct: 472 cgtcgctgagcaggaggctgaggagcaacgggagcatgaaggggggccagtc 421

>gb|AF143270.1| Vitis vinifera microsatellite ssrVvUCH22 sequence
          Length = 504

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 313 cgtcgctgagcaggaggctgaggaacagcgggagcctcaagggcggccagtc 364
           |||||||||||||||||||||||| || ||||||| | ||||| ||||||||
Sbjct: 34  cgtcgctgagcaggaggctgaggagcaacgggagcatgaaggggggccagtc 85

>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 78      cgtcccatcgcgcgcctgatgcgccg 103
               |||||||||||||||| |||||||||
Sbjct: 2920752 cgtcccatcgcgcgccggatgcgccg 2920727

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 96       atgcgccgcaagaagcacttggaccg 121
                ||||||||||||||||||| ||||||
Sbjct: 14232771 atgcgccgcaagaagcactcggaccg 14232746



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                         
Query: 336      aacagcgggagcctcaagggcggccagtcgcccatgttccc 376
                |||||||||||||| || || || ||||| |||||||||||
Sbjct: 14232525 aacagcgggagcctgaaaggtgggcagtcccccatgttccc 14232485



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 150      gagctcttcatctgcttcac 169
                ||||||||||||||||||||
Sbjct: 14232717 gagctcttcatctgcttcac 14232698

>dbj|AP004992.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0022O02
          Length = 176625

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 96    atgcgccgcaagaagcacttggaccg 121
             ||||||||||||||||||| ||||||
Sbjct: 76235 atgcgccgcaagaagcactcggaccg 76210



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 336   aacagcgggagcctcaagggcggccagtcgcccatgttccc 376
             |||||||||||||| || || || ||||| |||||||||||
Sbjct: 75989 aacagcgggagcctgaaaggtgggcagtcccccatgttccc 75949



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 150   gagctcttcatctgcttcac 169
             ||||||||||||||||||||
Sbjct: 76181 gagctcttcatctgcttcac 76162

>dbj|AK121496.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033001G17, full
           insert sequence
          Length = 2971

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 96  atgcgccgcaagaagcacttggaccg 121
           ||||||||||||||||||| ||||||
Sbjct: 203 atgcgccgcaagaagcactcggaccg 228



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 336 aacagcgggagcctcaagggcggccagtcgcccatgttccc 376
           |||||||||||||| || || || ||||| |||||||||||
Sbjct: 449 aacagcgggagcctgaaaggtgggcagtcccccatgttccc 489



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 150 gagctcttcatctgcttcac 169
           ||||||||||||||||||||
Sbjct: 257 gagctcttcatctgcttcac 276

>emb|AL603787.8| Mouse DNA sequence from clone RP23-169J19 on chromosome 11 Contains the
             3' end of a novel gene, the gene for a novel protein
             similar to nascent polypeptide-associated complex alpha
             polypeptide Naca, the Tbrg4 gene for transforming growth
             factor beta regulated gene 4, the Wap gene for whey acidic
             protein, an ethanol induced 6 (Etohi6) pseudogene, two
             novel genes, the Ramp3 gene for receptor (calcitonin)
             activity modifying protein 3, a lactate dehydrogenase 1 A
             chain (Ldh1) pseudogene, a mitochondrial ribosomal protein
             L36 (Mrpl36) pseudogene, a retinoblastoma binding protein
             5 (Rbbp5) pseudogene, a ribosomal protein L7A (Rpl7a)
             pseudogene and two CpG islands, complete sequence
          Length = 225879

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 215   ggcattcagccccggacgcacc 236
             ||||||||||||||||||||||
Sbjct: 37870 ggcattcagccccggacgcacc 37891

>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 231    cgcaccggaaccgccggagc 250
              ||||||||||||||||||||
Sbjct: 407203 cgcaccggaaccgccggagc 407184

>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 320     gagcaggaggctgaggaacagcgg 343
               ||||||||||||||||| ||||||
Sbjct: 1717422 gagcaggaggctgaggagcagcgg 1717445

>ref|XM_589641.2| PREDICTED: Bos taurus similar to Williams-Beuren syndrome
           chromosome region 24 homolog (LOC539811), mRNA
          Length = 736

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 317 gctgagcaggaggctgagga 336
           ||||||||||||||||||||
Sbjct: 289 gctgagcaggaggctgagga 308

>gb|AY521461.1| Oryctolagus cuniculus esophagal epithelial Na channel alpha subunit
            mRNA, complete cds
          Length = 2230

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 236  cggaaccgccggagcagcaggagg 259
            ||||||||||||||||||| ||||
Sbjct: 1714 cggaaccgccggagcagcatgagg 1691

>ref|XM_323190.1| Neurospora crassa OR74A hypothetical protein (NCU03872.1) partial
            mRNA
          Length = 2658

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 282  gcggaagcggcaccggcagcgctgctgc 309
            |||||||||||| ||||||| |||||||
Sbjct: 1949 gcggaagcggcagcggcagcactgctgc 1922

>ref|XM_951452.1| Neurospora crassa OR74A hypothetical protein (NCU03872.1) partial
            mRNA
          Length = 2658

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 282  gcggaagcggcaccggcagcgctgctgc 309
            |||||||||||| ||||||| |||||||
Sbjct: 1949 gcggaagcggcagcggcagcactgctgc 1922

>ref|XM_838440.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1357)
           partial mRNA
          Length = 1134

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 320 gagcaggaggctgaggaacagcgg 343
           ||||||||||||||||| ||||||
Sbjct: 319 gagcaggaggctgaggagcagcgg 342

>ref|XM_546924.2| PREDICTED: Canis familiaris similar to Williams-Beuren syndrome
           chromosome region 24 homolog (LOC489806), mRNA
          Length = 1232

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 317 gctgagcaggaggctgagga 336
           ||||||||||||||||||||
Sbjct: 787 gctgagcaggaggctgagga 806

>gb|AY394432.1| Sus scrofa alpha-subunit renal epithelial sodium channel mRNA,
            complete cds
          Length = 2331

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 236  cggaaccgccggagcagcaggagg 259
            ||||||||||||||||||| ||||
Sbjct: 2087 cggaaccgccggagcagcatgagg 2064

>gb|AC112503.7| Homo sapiens 3 BAC RP11-797D24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 86290

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 320   gagcaggaggctgaggaaca 339
             ||||||||||||||||||||
Sbjct: 73234 gagcaggaggctgaggaaca 73253

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 81       cccatcgcgcgcctgatgcg 100
                ||||||||||||||||||||
Sbjct: 14601794 cccatcgcgcgcctgatgcg 14601775

>gb|AC112969.12| Mus musculus chromosome 8, clone RP24-331K7, complete sequence
          Length = 164201

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 322    gcaggaggctgaggaacagc 341
              ||||||||||||||||||||
Sbjct: 151470 gcaggaggctgaggaacagc 151489

>ref|NM_213758.1| Sus scrofa sodium channel, nonvoltage-gated 1 alpha (SCNN1A), mRNA
          Length = 2331

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 236  cggaaccgccggagcagcaggagg 259
            ||||||||||||||||||| ||||
Sbjct: 2087 cggaaccgccggagcagcatgagg 2064

>dbj|AP005093.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1294_G06
          Length = 115468

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 81     cccatcgcgcgcctgatgcg 100
              ||||||||||||||||||||
Sbjct: 100083 cccatcgcgcgcctgatgcg 100064

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 224   ccccggacgcaccggaaccgccgg 247
             |||||||| |||||||||||||||
Sbjct: 39942 ccccggacccaccggaaccgccgg 39919

>dbj|AP005397.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0643D11
          Length = 137525

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    cccatcgcgcgcctgatgcg 100
             ||||||||||||||||||||
Sbjct: 23461 cccatcgcgcgcctgatgcg 23442

>emb|AJ132108.1|OCU132108 Oryctolagus cuniculus mRNA for epithelial sodium channel, alpha
            subunit
          Length = 2915

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 236  cggaaccgccggagcagcaggagg 259
            ||||||||||||||||||| ||||
Sbjct: 1731 cggaaccgccggagcagcatgagg 1708


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,681,948
Number of Sequences: 3902068
Number of extensions: 3681948
Number of successful extensions: 67800
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67505
Number of HSP's gapped (non-prelim): 295
length of query: 412
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 390
effective length of database: 17,147,199,772
effective search space: 6687407911080
effective search space used: 6687407911080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)